RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140451

Ensembl transcript IDs: ENST00000268043.8, ENST00000333425.10, ENST00000558380.1, ENST00000558547.1, ENST00000559239.2, ENST00000559522.1, ENST00000559872.1, ENST00000560444.1, ENST00000560504.1

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTaGACCCAGCCTGAGTCCCCACCAGTCCCCTCCAAGAGCCCTGAT +
Preference number: 1 (lower is better)
Translates to: PSCRDTPKFRSLFGG*TQPESPPVPSKSPD
Trigger: ATCAGGGCTCTTGGAGGGGACTGGTGGGGACTCAGGCTGGGTGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR TCA 90 bp AAATATGGGTGCACATTTTGCAGCTTATGTTCTTTGGTTAGGCTCTaGAGGGTGTTTGTTCTGGGCTGGGCTAGGCTGGGCCTAGCTGTA +
Preference number: 1 (lower is better)
Translates to: KYGCTFCSLCSLVRL*RVFVLGWARLGLAV
Trigger: TACAGCTAGGCCCAGCCTAGCCCAGCCCAGAACAAACACCCTTCAGAGCCTAACCAAAGAACATAAGCTGCAAAATGTGCACCCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR CAA 90 bp AGGCTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTaGGAGGCTGCACCCAGCCTGAGTCCCCACCAGTCCCCTCCAAGA +
Preference number: 2 (lower is better)
Translates to: RLGLAVETHLSSVLC*EAAPSLSPHQSPPR
Trigger: TCTTGGAGGGGACTGGTGGGGACTCAGGCTGGGTGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGTATTCCCTGGGGCCCTaGGCCACTAGGGAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQYSLGP*ATREQE
Trigger: CTCCTGCTCCCTAGTGGCCCAGGGCCCCAGGGAATA...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR CCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAACTCCAGTTATTCCCTaGGGCCCTGGGCCACTAGGG +
Preference number: 2 (lower is better)
Translates to: LGLAVETHLSSVLCLEAATPVIP*GPGPLG
Trigger: CCCTAGTGGCCCAGGGCCCCAGGGAATAACTGGAGT...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCATCTGTGTCCAGCCCTTaGAGAGAGCTTTGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LGLAVETHLSSVLCLEAASVSSP*RELCPL
Trigger: CAGAGGACAAAGCTCTCTGCAAGGGCTGGACACAGA...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR TCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCATTACCCAGGGCAAAGTaGGAGAAACTGAAGCACAGC +
Preference number: 2 (lower is better)
Translates to: LGLAVETHLSSVLCLEAALPRAK*EKLKHS
Trigger: GCTGTGCTTCAGTTTCTCTCACTTTGCCCTGGGTAA...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR GCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCATACAGAAGGGGACACTaGCTGCCTACTCCAGTTATT +
Preference number: 2 (lower is better)
Translates to: SLLQPERRDVQDSAALCPYRRGH*LPTPVI
Trigger: AATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR TCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCACAAAGTGAGAGAAACTaGAGCACAGCTGGTATATGG +
Preference number: 2 (lower is better)
Translates to: SLLQPERRDVQDSAALCPQSERN*STAGIW
Trigger: CCATATACCAGCTGTGCTTCAGTTTCTCTCACTTTG...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR GCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAGAAGGGGACACTGCCTaGCTACTCCAGTTATTCCCT +
Preference number: 2 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEEGDTA*LLQLFP
Trigger: AGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTC...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGAAGGGGACACTGCCTaGCTACTCCAGTTATTCCCT +
Preference number: 2 (lower is better)
Translates to: PCRELCPLTSATTQAHSQEGDTA*LLQLFP
Trigger: AGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR TCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAATTACCCAGGGCAAAGTaGGAGAAACTGAAGCACAGC +
Preference number: 2 (lower is better)
Translates to: PCRELCPLTSATTQAHSQLPRAK*EKLKHS
Trigger: GCTGTGCTTCAGTTTCTCTCACTTTGCCCTGGGTAA...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR TCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAAGAAAGGGTTACTTCTaGCCCTACAGCAGCTTACCC +
Preference number: 2 (lower is better)
Translates to: PCRELCPLTSATTQAHSQRKGYF*PYSSLP
Trigger: GGGTAAGCTGCTGTAGGGTCAGAAGTAACCCTTTCT...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTAAACTGAAGCACAGCTaGTATATGGGTTTAAAGTAC +
Preference number: 2 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCKLKHS*YMGLKY
Trigger: GTACTTTAAACCCATATACCAGCTGTGCTTCAGTTT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR TCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCAAAGTGAGAGAAACTaGAGCACAGCTGGTATATGG +
Preference number: 2 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQQSERN*STAGIW
Trigger: CCATATACCAGCTGTGCTTCAGTTTCTCTCACTTTG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR GCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGATACAGAAGGGGACACTaGCTGCCTACTCCAGTTATT +
Preference number: 2 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRYRRGH*LPTPVI
Trigger: AATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAAAACTGAAGCACAGCTaGTATATGGGTTTAAAGTAC +
Preference number: 2 (lower is better)
Translates to: SLLQPERRDVQDSAALCPKLKHS*YMGLKY
Trigger: GTACTTTAAACCCATATACCAGCTGTGCTTCAGTTT...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR CCA 72 bp AGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTaGGGCCCTGGGCCACTAGGGAGCAGGAGGACGGGG +
Preference number: 3 (lower is better)
Translates to: RRGHCLPTPVIP*GPGPLGSRRTG
Trigger: CCCCGTCCTCCTGCTCCCTAGTGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
3UTR TCA 72 bp TGCACATTTTGCAGCTTATGTTCTTTGGTTAGGCTCTaGAGGGTGTTTGTTCTGGGCTGGGCTAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: CTFCSLCSLVRL*RVFVLGWARLG
Trigger: GCCCAGCCTAGCCCAGCCCAGAACAAACACCCTTCAGAGCCTAACCAAAGAACATAAGCTGCAAAATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGCGGCGCAGGCGGTCTaGGGGGCAGTCCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPAAQAV*GAVREQ
Trigger: CTGCTCTCGGACTGCCCCCCAGACCGCCTGCGCCGC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTGGCCCCCGGTGGCCTaGACCGTCCAGCGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGWPPVA*TVQRSA
Trigger: CGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGGAGCTGGCCCCCGGTaGCCTGCACCGTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGGAGPR*PAPSSG
Trigger: ACCGCTGGACGGTGCAGGCCACCGGGGGCCAGCTCC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCCTCGGCGAAACGCGTaGAGAGGCGCGCGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCPRRNA*RGARRA
Trigger: TGCGCGCCGCGCGCCTCTTCACGCGTTTCGCCGAGG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGCAGCTGCTGCCGACTaGGGAGCTGGCCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCAAAAD*GAGPRW
Trigger: CCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAAGGCTGCACCCAGCCTaGGTCCCCACCAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPRLHPA*VPTSPL
Trigger: GAGGGGACTGGTGGGGACTCAGGCTGGGTGCAGCCT...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGGAGCCGCAGGGTGCTaGGCCCGGCCTCGGCGAAAC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCGAAGC*ARPRRN
Trigger: GTTTCGCCGAGGCCGGGCGCAGCACCCTGCGGCTCC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCTGGGGACTCCAGACTaGGGCTCCTGCCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCLGTPD*GSCPAA
Trigger: TGCGGCGGGGCAGGAGCCTCAGTCTGGAGTCCCCAG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAAGCACACGTAGGCCCTaGAGGCTGCGGGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPSTRRP*RLRARE
Trigger: TTCTCGGGCCCGCAGCCTGCAGGGCCTACGTGTGCT...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCCCCAGTGCTGGCAGTaGCCACAGTGCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGPQCWQ*PQCLWG
Trigger: CCCCCACAGGCACTGTGGCCACTGCCAGCACTGGGG...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGCCAGGGCCACACACTaGGCTAGAGGAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPARATH*ARGAWP
Trigger: AGGCCAGGCTCCTCTAGCCCAGTGTGTGGCCCTGGC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCGCACGCCTGGCCTTTaGGCCAGGGCCACACACTGG +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGRTPGL*ARATHW
Trigger: CCAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCG...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAGCCCTGCCGCACGCCTaGCCTTTGGGCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPALPHA*PLGQGH
Trigger: GTGGCCCTGGCCCAAAGGCCAGGCGTGCGGCAGGGC...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGGGGCTGGGAGCCCTTaGTCACAGGTGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPGAGSP*SQVAAA
Trigger: TGCAGCTGCCACCTGTGACCAAGGGCTCCCAGCCCC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACCTCGGCGAAACGCGTaGAGAGGCGCGCGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAPRRNA*RGARRA
Trigger: TGCGCGCCGCGCGCCTCTTCACGCGTTTCGCCGAGG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGGGCCGCAGCCAGCTTaGGGCGCAATGTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCGPQPA*GAMCAG
Trigger: TCCTGCGCACATTGCGCCTCAAGCTGGCTGCGGCCC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGCCGCCTCTCGTTGGTaGGGGCCACATCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPAASRW*GPHHPG
Trigger: ACCAGGATGATGTGGCCCTCACCAACGAGAGGCGGC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTAGGCTGCACCCAGCCTaGGTCCCCACCAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCRLHPA*VPTSPL
Trigger: GAGGGGACTGGTGGGGACTCAGGCTGGGTGCAGCCT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTACTCGCGGCGCTCGTTaGGACCCAGGCTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCTRGAR*DPGSAP
Trigger: CGGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCATGGCCCCCGGTGGCCTaGACCGTCCAGCGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAWPPVA*TVQRSA
Trigger: CGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCA...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTAGGCCCTGCAGGCTaGGGGCCCGAGAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCVGPAG*GPEKGP
Trigger: TGGCCCTTTCTCGGGCCCGCAGCCTGCAGGGCCTAC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTGGTGCCCCCGATGTaGCAGGCTGCCACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCVVPPM*QAATPV
Trigger: CACTGGGGTGGCAGCCTGCCACATCGGGGGCACCAC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGCCAGGGCCACACACTaGGCTAGAGGAGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGARATH*ARGAWP
Trigger: AGGCCAGGCTCCTCTAGCCCAGTGTGTGGCCCTGGC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACTGGAAGCAGAACCGTaGGGGCTGGGAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPLEAEP*GLGALG
Trigger: ACCAAGGGCTCCCAGCCCCCACGGTTCTGCTTCCAG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACCTTGTGGGAAGCTGTaGCCTGGAGCTGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPPCGKL*PGAGGS
Trigger: TGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGCCACATCATCCTGGTaGGTGCAGAGCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPATSSW*VQSLVA
Trigger: GGCCACGAGGCTCTGCACCCACCAGGATGATGTGGC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCATGCCGACTGAGGAGCTaGCCCCCGGTGGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPCRLRS*PPVACT
Trigger: GGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCA...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAGCGGGCCCTGGCGCTTaGAGCCGCAGCATCAACTCG +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPAGPGA*SRSINS
Trigger: CGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGC...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGCTGCCGGACAGCTCTaGCCACGGCCTCCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGAAGQL*PRPPVC
Trigger: ACAAACTGGAGGCCGTGGCCAGAGCTGTCCGGCAGC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTCTCGCCCCACCTTGTaGGAAGCTGTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGSRPTL*EAVAWS
Trigger: GCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACATAGGCCTGGCCACTaGCAAACACACGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPHRPGH*QTHGPE
Trigger: CTCTGGGCCGTGTGTTTGCCAGTGGCCAGGCCTATG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGCCTCTGCTGGTCTCTaGGTTCGGGCAGACACTCAC +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPASAGL*VRADTH
Trigger: GTGAGTGTCTGCCCGAACCCAGAGACCAGCAGAGGC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS-3UTR TCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAGCAGCTGCTGCCGACTaGGGAGCTGGCCCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEAAAAD*GAGPRW
Trigger: CCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGC...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCTGGGGACTCCAGACTaGGGCTCCTGCCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQLGTPD*GSCPAA
Trigger: TGCGGCGGGGCAGGAGCCTCAGTCTGGAGTCCCCAG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGTCCTCATATTCCCCTaGCGCCGCCTCTATGCCCGA +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGVLIFP*RRLYAR
Trigger: TCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGAC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGGAGCCGCAGGGTGCTaGGCCCGGCCTCGGCGAAAC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQGAAGC*ARPRRN
Trigger: GTTTCGCCGAGGCCGGGCGCAGCACCCTGCGGCTCC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCCGAATGGCTTGTTCTaGTGCCGGACAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGPNGLF*CRTALA
Trigger: GGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGG...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACCTCATCTGAACACCTaGCTAGCCTCACGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPPHLNT*LASRPA
Trigger: TGCAGGCCGTGAGGCTAGGCAGGTGTTCAGATGAGG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAAGCTGGAGGGGCAGCTaGTGCCGACTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPSWRGS*CRLRSW
Trigger: CCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCAGCT...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAAGCACACGTAGGCCCTaGAGGCTGCGGGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPSTRRP*RLRARE
Trigger: TTCTCGGGCCCGCAGCCTGCAGGGCCTACGTGTGCT...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGCGGCGCAGGCGGTCTaGGGGGCAGTCCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQAAQAV*GAVREQ
Trigger: CTGCTCTCGGACTGCCCCCCAGACCGCCTGCGCCGC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCATTCCAGCTCTTGGACTaGAAGCAGAACCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPFQLLD*KQNRGG
Trigger: GCCCCCACGGTTCTGCTTCCAGTCCAAGAGCTGGAA...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACAGCTCCAGGGTCACTaGCACACACCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPQLQGH*HTPLPA
Trigger: AGCTGGAAGAGGTGTGTGCCAGTGACCCTGGAGCTG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTTGGGAAGCTGTGGCCTaGAGCTGGCGGGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCWEAVA*SWRVTS
Trigger: TGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCA...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGGGCATCCAGGGTACTaGCCAGCTCAGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGGHPGY*PAQGCC
Trigger: ACAGCAACCCTGAGCTGGCCAGTACCCTGGATGCCC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGTGCCGACTGAGGAGCTaGCCCCCGGTGGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQCRLRS*PPVACT
Trigger: GGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCA...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAATGCCTTGGCTCTTGTaGATGGACATCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPMPWLL*MDIAQA
Trigger: GGCCTGGGCGATGTCCATCCACAAGAGCCAAGGCAT...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCCTGCAGTAGAGAGATaGAGGTCTGGTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGPAVER*RSGLPA
Trigger: GGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGG...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCGCCGCTCCTCGGGCTaGACAGGGCTGATGGTGACG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQRRSSG*TGLMVT
Trigger: CGTCACCATCAGCCCTGTGCAGCCCGAGGAGCGGCG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAAGGCTGCCACCCCAGTaGTGGCAGTGGCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAARLPPQ*WQWPQC
Trigger: GCACTGTGGCCACTGCCAGCACTGGGGTGGCAGCCT...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGATGAAGGTCTGGTCTaGCTGCCTCCACACCTTGGT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPDEGLV*LPPHLG
Trigger: ACCAAGGTGTGGAGGCAGGCAGACCAGACCTTCATC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCACAAAGGCATGGAGGGTaGTGCCCCCGATGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPQRHGG*CPRCGR
Trigger: CCTGCCACATCGGGGGCACCACCCTCCATGCCTTTG...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCGCACGCCTGGCCTTTaGGCCAGGGCCACACACTGG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQRTPGL*ARATHW
Trigger: CCAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGAGCCCTGCCGCACGCCTaGCCTTTGGGCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRALPHA*PLGQGH
Trigger: GTGGCCCTGGCCCAAAGGCCAGGCGTGCGGCAGGGC...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGGGGCTGGGAGCCCTTaGTCACAGGTGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAGAGSP*SQVAAA
Trigger: TGCAGCTGCCACCTGTGACCAAGGGCTCCCAGCCCC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCCTGCCTCCACACCTTaGTCAGCTCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCPASTP*SAPGSL
Trigger: CAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCATCTCGCCCCACCTTGTaGGAAGCTGTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPSRPTL*EAVAWS
Trigger: GCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGA...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCATCTGTGTACCTTACCTaGCAGCTCCTGAAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPSVYLT*QLLKPP
Trigger: AGGCGGCTTCAGGAGCTGCCAGGTAAGGTACACAGA...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGGGCATCCAGGGTACTaGCCAGCTCAGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCGHPGY*PAQGCC
Trigger: ACAGCAACCCTGAGCTGGCCAGTACCCTGGATGCCC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTGGCTAACAGGACACTaGGCATCCAGGGTACTGGCC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGWLTGH*ASRVLA
Trigger: GGCCAGTACCCTGGATGCCCAGTGTCCTGTTAGCCA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTACTCCAGTTATTCCCTaGGGCCCTGGGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCTPVIP*GPGPLG
Trigger: CCCTAGTGGCCCAGGGCCCCAGGGAATAACTGGAGT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGTGTTTGTTCTGGGCTaGGCTAGGCTGGGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGVFVLG*ARLGLA
Trigger: AGCTAGGCCCAGCCTAGCCCAGCCCAGAACAAACAC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGAAGGGTGTTTGTTCTaGGCTGGGCTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCEGCLF*AGLGWA
Trigger: GGCCCAGCCTAGCCCAGCCCAGAACAAACACCCTTC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGGGCCGCAGCCAGCTTaGGGCGCAATGTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQGPQPA*GAMCAG
Trigger: TCCTGCGCACATTGCGCCTCAAGCTGGCTGCGGCCC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGCCGCCTCTCGTTGGTaGGGGCCACATCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAAASRW*GPHHPG
Trigger: ACCAGGATGATGTGGCCCTCACCAACGAGAGGCGGC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCTGCCGCCGCCTCTATaGCCGAGAGCATCGTCACCG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQLPPPL*PRASSP
Trigger: CGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAACTCGCGGCGCTCGTTaGGACCCAGGCTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQTRGAR*DPGSAP
Trigger: CGGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGT...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAGCGGGCCCTGGCGCTTaGAGCCGCAGCATCAACTCG +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEAGPGA*SRSINS
Trigger: CGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGC...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAACGCCGCTCCTCGGGCTaGACAGGGCTGATGGTGACG +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTERRSSG*TGLMVT
Trigger: CGTCACCATCAGCCCTGTGCAGCCCGAGGAGCGGCG...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAGGCTGCCACCCCAGTaGTGGCAGTGGCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQRLPPQ*WQWPQC
Trigger: GCACTGTGGCCACTGCCAGCACTGGGGTGGCAGCCT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAGGCATGGAGGGTGGTaGCCCCGATGTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQRHGGW*PRCGRL
Trigger: CAGCCTGCCACATCGGGGGCACCACCCTCCATGCCT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGTCACAGGTGGCAGCTaGAGAAAGTCCCCACAGATG +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGVTGGS*RKSPQM
Trigger: CATCTGTGGGGACTTTCTGCAGCTGCCACCTGTGAC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCATCATCCTGGTGGGTaGAGAGCCTCGTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCHHPGG*RASWPQ
Trigger: TTGTGGCCACGAGGCTCTGCACCCACCAGGATGATG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGGTAGGCCCTGCAGGCTaGGGGCCCGAGAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQVGPAG*GPEKGP
Trigger: TGGCCCTTTCTCGGGCCCGCAGCCTGCAGGGCCTAC...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTTCTCTGTTTGGAGGCTaGACCCAGCCTGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCSLFGG*TQPESP
Trigger: TGGGGACTCAGGCTGGGTGCAGCCTCCAAACAGAGA...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACATCGTCACCGCCTCTaGTGGTCTCTGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAHRHRL*WSLGSG
Trigger: GCCCGAACCCAGAGACCAGCAGAGGCGGTGACGATG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACCCCAGTGCTGGCAGTaGCCACAGTGCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQPQCWQ*PQCLWG
Trigger: CCCCCACAGGCACTGTGGCCACTGCCAGCACTGGGG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGTGGTGCCCCCGATGTaGCAGGCTGCCACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQVVPPM*QAATPV
Trigger: CACTGGGGTGGCAGCCTGCCACATCGGGGGCACCAC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCTGGATCCCTCCGAATaGCTTGTTCTGCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCLDPSE*LVLLPD
Trigger: GTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAGCCCTTGGTCACAGGTaGCAGCTGCAGAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPALGHR*QLQKVP
Trigger: GGGGACTTTCTGCAGCTGCCACCTGTGACCAAGGGC...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCATGGGAAGCTGTGGCCTaGAGCTGGCGGGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAWEAVA*SWRVTS
Trigger: TGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCA...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTTCCTGCACTCCCAGTaGAGAAGATGCTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGFLHSQ*RRCSGL
Trigger: AAGGCCAGAGCATCTTCTTCACTGGGAGTGCAGGAA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCATGTTCTCCTGGTCTaGGGCTGCCTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGHVLLV*GCLIII
Trigger: GATGATGATGAGGCAGCCTCAGACCAGGAGAACATG...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTCTTCTCTTTGTGGGTaGGGCTCAGAGGATTGGGTC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGSSLCG*GSEDWV
Trigger: GACCCAATCCTCTGAGCCTCACCCACAAAGAGAAGA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCTCCCTTCTGCAGCCTaGAAGGAGGGATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCLPSAA*KEGCSG
Trigger: TCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCACATCGTCACCGCCTCTaGTGGTTTGTGCCGACACTC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPHRHRL*WFVPTL
Trigger: GAGTGTCGGCACAAACCAGCAGAGGCGGTGACGATG...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268043.8
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCTGCCGCCGCCTCTATaGCCGAGAGCATCGTCACCG +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQLPPPL*PRASSP
Trigger: CGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCCCGATGTGGCAGGCTaGCACCCCAGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQPDVAG*HPSAGS
Trigger: ACTGCCAGCACTGGGGTGGCAGCCTGCCACATCGGG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAAGGCATGGAGGGTGGTaGCCCCGATGTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQRHGGW*PRCGRL
Trigger: CAGCCTGCCACATCGGGGGCACCACCCTCCATGCCT...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGATGAAGGTCTGGTCTaGCTGCCTCCACACCTTGGT +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCDEGLV*LPPHLG
Trigger: ACCAAGGTGTGGAGGCAGGCAGACCAGACCTTCATC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTCTGTGTCCAGCCCTTaGAGAGAGCTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGSVSSP*RELCPL
Trigger: CAGAGGACAAAGCTCTCTGCAAGGGCTGGACACAGA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGGATGTTCAGGACTCTaGAGCTCTGTGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCGCSGL*SSVSSP
Trigger: AGGGCTGGACACAGAGCTGCAGAGTCCTGAACATCC...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCACGTCACCGCCTCTGCTaGTTTGTGCCGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPRHRLC*FVPTLR
Trigger: TCTGAGTGTCGGCACAAACCAGCAGAGGCGGTGACG...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268043.8
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCAAAGGCATGGAGGGTaGTGCCCCCGATGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQQRHGG*CPRCGR
Trigger: CCTGCCACATCGGGGGCACCACCCTCCATGCCTTTG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCCACAGATGATGAGCTaGATCCCTCCGAATGGCTTG +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGPQMMS*IPPNGL
Trigger: CAAGCCATTCGGAGGGATCCAGCTCATCATCTGTGG...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGCCCTTGGTCACAGGTaGCAGCTGCAGAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAALGHR*QLQKVP
Trigger: GGGGACTTTCTGCAGCTGCCACCTGTGACCAAGGGC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGCCACATCATCCTGGTaGGTGCAGAGCCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQATSSW*VQSLVA
Trigger: GGCCACGAGGCTCTGCACCCACCAGGATGATGTGGC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAATGCCTTGGCTCTTGTaGATGGACATCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPMPWLL*MDIAQA
Trigger: GGCCTGGGCGATGTCCATCCACAAGAGCCAAGGCAT...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCACACAGCGAACCGCCATaGGGTCAAAGTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPHSEPP*GQSPAH
Trigger: GTGTGCTGGACTTTGACCCCATGGCGGTTCGCTGTG...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCGTCTGCCTCCACCATTaGGATCTCGTCAATGACCAA +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGVCLHH*DLVNDQ
Trigger: TTGGTCATTGACGAGATCTCAATGGTGGAGGCAGAC...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTTCTTCTCTTTGTGGGTaGGGCTCAGAGGATTGGGTC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCSSLCG*GSEDWV
Trigger: GACCCAATCCTCTGAGCCTCACCCACAAAGAGAAGA...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTTACCCAGGGCAAAGTaGGAGAAACTGAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGLPRAK*EKLKHS
Trigger: GCTGTGCTTCAGTTTCTCTCACTTTGCCCTGGGTAA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGACCCGATGTGGCAGGCTaGCACCCCAGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRPDVAG*HPSAGS
Trigger: ACTGCCAGCACTGGGGTGGCAGCCTGCCACATCGGG...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACCTCATCTGAACACCTaGCTAGCCTCACGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAPHLNT*LASRPA
Trigger: TGCAGGCCGTGAGGCTAGGCAGGTGTTCAGATGAGG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCATACAGAAGGGGACACTaGCTGCCTACTCCAGTTATT +
Preference number: 4 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPYRRGH*LPTPVI
Trigger: AATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTAGCACCTGTCTTCATTaGCTCTCCCTTCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCSTCLH*LSLLQP
Trigger: AGGCTGCAGAAGGGAGAGGCAATGAAGACAGGTGCT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCATCTCTGTTTGGAGGCTaGACCCAGCCTGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAASLFGG*TQPESP
Trigger: TGGGGACTCAGGCTGGGTGCAGCCTCCAAACAGAGA...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAATGGGCTAGAGGAGCCTaGCCTGAGCCGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQWARGA*PEPMPA
Trigger: TGCAGGCATCGGCTCAGGCCAGGCTCCTCTAGCCCA...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGGCTGCCGGACAGCTCTaGCCACGGCCTCCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQAAGQL*PRPPVC
Trigger: ACAAACTGGAGGCCGTGGCCAGAGCTGTCCGGCAGC...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCCACAGATGATGAGCTaGATCCCTCCGAATGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCPQMMS*IPPNGL
Trigger: CAAGCCATTCGGAGGGATCCAGCTCATCATCTGTGG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCTGGAAGCAGAACCGTaGGGGCTGGGAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQLEAEP*GLGALG
Trigger: ACCAAGGGCTCCCAGCCCCCACGGTTCTGCTTCCAG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAAGAGAGATGAAGGTCTaGTCTGCCTGCCTCCACACC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPREMKV*SACLHT
Trigger: GGTGTGGAGGCAGGCAGACCAGACCTTCATCTCTCT...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACCTTGTGGGAAGCTGTaGCCTGGAGCTGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQPCGKL*PGAGGS
Trigger: TGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGTCCAGCGGTCAGCGTaGATGACCTCAGTGACTCCA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAVQRSA*MTSVTP
Trigger: TGGAGTCACTGAGGTCATCCACGCTGACCGCTGGAC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTTCCAGGGTCATGCCTTaGCTCTTGTGGATGGACATC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCSRVMP*LLWMDI
Trigger: GATGTCCATCCACAAGAGCCAAGGCATGACCCTGGA...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACACAGCGAACCGCCATaGGGTCAAAGTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAHSEPP*GQSPAH
Trigger: GTGTGCTGGACTTTGACCCCATGGCGGTTCGCTGTG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAATGCCCCGCCGCAGGGTaGCATAGAAGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQCPAAG*HRSAAH
Trigger: GTGTGCTGCACTTCTATGCCACCCTGCGGCGGGGCA...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAATGCCCCGCCGCAGGGTaGCATAGAAGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTECPAAG*HRSAAH
Trigger: GTGTGCTGCACTTCTATGCCACCCTGCGGCGGGGCA...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGTATTCCCTGGGGCCCTaGGCCACTAGGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQYSLGP*ATREQE
Trigger: CTCCTGCTCCCTAGTGGCCCAGGGCCCCAGGGAATA...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAATATTCCCTGGGGCCCTaGGCCACTAGGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEYSLGP*ATREQE
Trigger: CTCCTGCTCCCTAGTGGCCCAGGGCCCCAGGGAATA...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTAGAAAGGGTTACTTCTaGCCCTACAGCAGCTTACCC +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCRKGYF*PYSSLP
Trigger: GGGTAAGCTGCTGTAGGGTCAGAAGTAACCCTTTCT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAGAGAGCTTTGTCCTCTaGCATCAGCTACCACACAGG +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPESFVL*HQLPHR
Trigger: CCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTC...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAATGGCTTGTTCTGCTaGCGGACAGCTCTGGCCACG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQNGLFC*RTALAT
Trigger: CGTGGCCAGAGCTGTCCGGCAGCAGAACAAGCCATT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACCGAATGGCTTGTTCTaGTGCCGGACAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQPNGLF*CRTALA
Trigger: GGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAGGTCTGGTCTGCCTaGCTCCACACCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQKVWSA*LHTLVS
Trigger: GCTGACCAAGGTGTGGAGGCAGGCAGACCAGACCTT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACCTAGCCTCACGGCCTaGAGTAGAGAGATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAPSLTA*SREMKV
Trigger: GACCTTCATCTCTCTACTGCAGGCCGTGAGGCTAGG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCTACAGAAGGGGACACTaGCTGCCTACTCCAGTTATT +
Preference number: 4 (lower is better)
Translates to: NTEGDTACLLQLFPGALGYRRGH*LPTPVI
Trigger: AATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGAAGGCAGGGGCCACCTTaGGGCTTCTGTGCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRRQGPP*GFCARL
Trigger: GAGCCTAGCACAGAAGCCCCAAGGTGGCCCCTGCCT...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGATGGGCTAGAGGAGCCTaGCCTGAGCCGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRWARGA*PEPMPA
Trigger: TGCAGGCATCGGCTCAGGCCAGGCTCCTCTAGCCCA...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGTCAATGACCAACCGCTaGCAGTTCAGCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQSMTNR*QFSQPC
Trigger: GCAGGGCTGGCTGAACTGCCAGCGGTTGGTCATTGA...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCCTGCCTCCACACCTTaGTCAGCTCCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQPASTP*SAPGSL
Trigger: CAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGAGGGCCACATCATCCTaGTGGGTGCAGAGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQRATSS*WVQSLV
Trigger: CACGAGGCTCTGCACCCACCAGGATGATGTGGCCCT...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCACAGGAACCGCACCTaGGGTAGCCCTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQHRNRT*GSPLPS
Trigger: AGAAGGGAGAGGGCTACCCCAGGTGCGGTTCCTGTG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGTCCAGCGGTCAGCGTaGATGACCTCAGTGACTCCA +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQVQRSA*MTSVTP
Trigger: TGGAGTCACTGAGGTCATCCACGCTGACCGCTGGAC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACATAGGCCTGGCCACTaGCAAACACACGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQHRPGH*QTHGPE
Trigger: CTCTGGGCCGTGTGTTTGCCAGTGGCCAGGCCTATG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGGAAGGGTGTTTGTTCTaGGCTGGGCTAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQEGCLF*AGLGWA
Trigger: GGCCCAGCCTAGCCCAGCCCAGAACAAACACCCTTC...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCATTGAGATCTCGTCAATaGCCAACCGCTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPLRSRQ*PTAGSS
Trigger: TGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAA...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCATCTTTGGTTAGGCTCTaGAGGGTGTTTGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPSLVRL*RVFVLG
Trigger: GCCCAGAACAAACACCCTTCAGAGCCTAACCAAAGA...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGTCACAGGTGGCAGCTaGAGAAAGTCCCCACAGATG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQVTGGS*RKSPQM
Trigger: CATCTGTGGGGACTTTCTGCAGCTGCCACCTGTGAC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAAAGGTCTGGTCTGCCTaGCTCCACACCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEKVWSA*LHTLVS
Trigger: GCTGACCAAGGTGTGGAGGCAGGCAGACCAGACCTT...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACATCATCCTGGTGGGTaGAGAGCCTCGTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQHHPGG*RASWPQ
Trigger: TTGTGGCCACGAGGCTCTGCACCCACCAGGATGATG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAATCAATGACCAACCGCTaGCAGTTCAGCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTESMTNR*QFSQPC
Trigger: GCAGGGCTGGCTGAACTGCCAGCGGTTGGTCATTGA...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAATTCCAGCTCTTGGACTaGAAGCAGAACCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQFQLLD*KQNRGG
Trigger: GCCCCCACGGTTCTGCTTCCAGTCCAAGAGCTGGAA...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAACAGCTCCAGGGTCACTaGCACACACCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEQLQGH*HTPLPA
Trigger: AGCTGGAAGAGGTGTGTGCCAGTGACCCTGGAGCTG...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGTCTGTGTACCTTACCTaGCAGCTCCTGAAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQSVYLT*QLLKPP
Trigger: AGGCGGCTTCAGGAGCTGCCAGGTAAGGTACACAGA...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAATGGCTAACAGGACACTaGGCATCCAGGGTACTGGCC +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEWLTGH*ASRVLA
Trigger: GGCCAGTACCCTGGATGCCCAGTGTCCTGTTAGCCA...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGACACAGGAACCGCACCTaGGGTAGCCCTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRHRNRT*GSPLPS
Trigger: AGAAGGGAGAGGGCTACCCCAGGTGCGGTTCCTGTG...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCTTGGCTCTTGTGGATaGACATCGCCCAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQLGSCG*TSPRPA
Trigger: AGCTGGCCTGGGCGATGTCCATCCACAAGAGCCAAG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAGTGTTTGTTCTGGGCTaGGCTAGGCTGGGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEVFVLG*ARLGLA
Trigger: AGCTAGGCCCAGCCTAGCCCAGCCCAGAACAAACAC...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGTCTGCCTCCACCATTaGGATCTCGTCAATGACCAA +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAVCLHH*DLVNDQ
Trigger: TTGGTCATTGACGAGATCTCAATGGTGGAGGCAGAC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGACCTGCAGTAGAGAGATaGAGGTCTGGTCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRPAVER*RSGLPA
Trigger: GGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGG...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGAGAGCTTTGTCCTCTaGCATCAGCTACCACACAGG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQESFVL*HQLPHR
Trigger: CCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCTCCCTTCTGCAGCCTaGAAGGAGGGATGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQLPSAA*KEGCSG
Trigger: TCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCATCTTTGGTTAGGCTCTaGAGGGTGTTTGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGLAVETHLSSVLCLEAASLVRL*RVFVLG
Trigger: GCCCAGAACAAACACCCTTCAGAGCCTAACCAAAGA...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGAAATGGCTTGTTCTGCTaGCGGACAGCTCTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRNGLFC*RTALAT
Trigger: CGTGGCCAGAGCTGTCCGGCAGCAGAACAAGCCATT...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGAAGGGGACACTGCCTaGCTACTCCAGTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQEGDTA*LLQLFP
Trigger: AGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGGATGTTCAGGACTCTaGAGCTCTGTGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQGCSGL*SSVSSP
Trigger: AGGGCTGGACACAGAGCTGCAGAGTCCTGAACATCC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGACTGGATCCCTCCGAATaGCTTGTTCTGCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRLDPSE*LVLLPD
Trigger: GTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAG...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGACCTCTTCCAGCTCTTaGACTGGAAGCAGAACCGTG +
Preference number: 4 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQTSSSS*TGSRTV
Trigger: CACGGTTCTGCTTCCAGTCCAAGAGCTGGAAGAGGT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAAGAGAGATGAAGGTCTaGTCTGCCTGCCTCCACACC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQREMKV*SACLHT
Trigger: GGTGTGGAGGCAGGCAGACCAGACCTTCATCTCTCT...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACATGTTCTCCTGGTCTaGGGCTGCCTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQHVLLV*GCLIII
Trigger: GATGATGATGAGGCAGCCTCAGACCAGGAGAACATG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAATTGCCTCTCCCTTCTaGAGCCTGAAAGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQIASPF*SLKGGM
Trigger: CATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGCAAT...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGAGCACCTGTCTTCATTaGCTCTCCCTTCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQSTCLH*LSLLQP
Trigger: AGGCTGCAGAAGGGAGAGGCAATGAAGACAGGTGCT...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAATCGTAGCCGGCCTGTaGCTAAGCTCCGAAACTAGA +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEIVAGL*LSSETR
Trigger: TCTAGTTTCGGAGCTTAGCCACAGGCCGGCTACGAT...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268043.8
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGTTCCTCAGAAAGCTGTaGCTTGGTGGAGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQFLRKL*LGGGQA
Trigger: AGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAA...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAATTCCTCAGAAAGCTGTaGCTTGGTGGAGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQFLRKL*LGGGQA
Trigger: AGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAA...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGACCTCTTCCAGCTCTTaGACTGGAAGCAGAACCGTG +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQTSSSS*TGSRTV
Trigger: CACGGTTCTGCTTCCAGTCCAAGAGCTGGAAGAGGT...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGTCCAGGGTCATGCCTTaGCTCTTGTGGATGGACATC +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQSRVMP*LLWMDI
Trigger: GATGTCCATCCACAAGAGCCAAGGCATGACCCTGGA...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGTGCCTCATCATCATCTaGGGACTCCAGACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQCLIII*GLQTEA
Trigger: AGCCTCAGTCTGGAGTCCCCAGATGATGATGAGGCA...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAATGCCTCATCATCATCTaGGGACTCCAGACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQCLIII*GLQTEA
Trigger: AGCCTCAGTCTGGAGTCCCCAGATGATGATGAGGCA...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGTTGAGATCTCGTCAATaGCCAACCGCTGGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQLRSRQ*PTAGSS
Trigger: TGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAA...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGGCCTCTGCTGGTTTGTaGCGACACTCAGATGAACAA +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQASAGL*RHSDEQ
Trigger: TTGTTCATCTGAGTGTCGGCACAAACCAGCAGAGGC...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268043.8
CDS-3UTR GCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGAGAAGGGGACACTGCCTaGCTACTCCAGTTATTCCCT +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLREGDTA*LLQLFP
Trigger: AGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTC...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGAATTGCCTCTCCCTTCTaGAGCCTGAAAGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRIASPF*SLKGGM
Trigger: CATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGCAAT...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR GCA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGGCAGACACTCACTTGTaGCGACACTCAGATGAACAA +
Preference number: 4 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQADTHL*RHSDEQ
Trigger: TTGTTCATCTGAGTGTCGGCACAAGTGAGTGTCTGC...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS-3UTR CCA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTAAGCAGCTTAAAATATaGGTGCACATTTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCKQLKI*VHILQL
Trigger: AAGCTGCAAAATGTGCACCCATATTTTAAGCTGCTT...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR TCA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAACAAAGTGAGAGAAACTaGAGCACAGCTGGTATATGG +
Preference number: 4 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEQSERN*STAGIW
Trigger: CCATATACCAGCTGTGCTTCAGTTTCTCTCACTTTG...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAAAGCAGCTTAAAATATaGGTGCACATTTTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLLQPERRDVQDSAALCPKQLKI*VHILQL
Trigger: AAGCTGCAAAATGTGCACCCATATTTTAAGCTGCTT...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CCA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAAAACTGAAGCACAGCTaGTATATGGGTTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: PCRELCPLTSATTQAHSQKLKHS*YMGLKY
Trigger: GTACTTTAAACCCATATACCAGCTGTGCTTCAGTTT...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS TCA 90 bp GGGCGGGGAGCCGCAGGGTGCTGCGCCCGGCCTCGGCGAAACGCGTaGAGAGGCGCGCGGCGCGCAGAGGAAAGCAGCGCGGCCGCCCCG +
Preference number: 5 (lower is better)
Translates to: GRGAAGCCARPRRNA*RGARRAEESSAAAP
Trigger: CGGGGCGGCCGCGCTGCTTTCCTCTGCGCGCCGCGCGCCTCTTCACGCGTTTCGCCGAGGCCGGGCGCAGCACCCTGCGGCTCCCCGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CCA 90 bp GCGCGCGGCGCGCAGAGGAAAGCAGCGCGGCCGCCCCGCGGGCCCTaGCGCTTGCAGCCGCAGCATCAACTCGCGGCGCTCGTTGCGACC +
Preference number: 5 (lower is better)
Translates to: ARGAQRKAARPPRGP*RLQPQHQLAALVAT
Trigger: GGTCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCGGGGCGGCCGCGCTGCTTTCCTCTGCGCGCCGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 90 bp GTGTCCGGAACCCGGGTGGCCGCCCTGAGCCGCCGCTCCTCGGGCTaGACAGGGCTGATGGTGACGAAGTCGCGGGGCCGCGGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: VSGTRVAALSRRSSG*TGLMVTKSRGRGPS
Trigger: GCTGGGCCCGCGGCCCCGCGACTTCGTCACCATCAGCCCTGTGCAGCCCGAGGAGCGGCGGCTCAGGGCGGCCACCCGGGTTCCGGACAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 90 bp GCGCGCAGAGGAAAGCAGCGCGGCCGCCCCGCGGGCCCTGGCGCTTaGAGCCGCAGCATCAACTCGCGGCGCTCGTTGCGACCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ARRGKQRGRPAGPGA*SRSINSRRSLRPRL
Trigger: GAGCCTGGGTCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCGGGGCGGCCGCGCTGCTTTCCTCTGCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 90 bp CGGGCCCTGGCGCTTGCAGCCGCAGCATCAACTCGCGGCGCTCGTTaGGACCCAGGCTCAGCTCCGCGGTGCGCAGGGCCTGGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: RALALAAAASTRGAR*DPGSAPRCAGPGAF
Trigger: GAAGGCGCCAGGCCCTGCGCACCGCGGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CCA 90 bp AGCCAGCTTGAGGCGCAATGTGCGCAGGAAGCGGCGCAGGCGGTCTaGGGGGCAGTCCGAGAGCAGCAGCTGCACTGCGCCGGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: SQLEAQCAQEAAQAV*GAVREQQLHCAGPG
Trigger: CCCGGGGCCGGCGCAGTGCAGCTGCTGCTCTCGGACTGCCCCCCAGACCGCCTGCGCCGCTTCCTGCGCACATTGCGCCTCAAGCTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS TCA 90 bp GGATGGACATCGCCCAGGCCAGCTGGAGGGGCAGCTGCTGCCGACTaGGGAGCTGGCCCCCGGTGGCCTGCACCGTCCAGCGGTCAGCGT +
Preference number: 5 (lower is better)
Translates to: GWTSPRPAGGAAAAD*GAGPRWPAPSSGQR
Trigger: ACGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCGATGTCCATCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 90 bp CTCTTGTGGATGGACATCGCCCAGGCCAGCTGGAGGGGCAGCTGCTaGCGACTGAGGAGCTGGCCCCCGGTGGCCTGCACCGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LLWMDIAQASWRGSC*RLRSWPPVACTVQR
Trigger: CCGCTGGACGGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCGATGTCCATCCACAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 90 bp TGGCTCTTGTGGATGGACATCGCCCAGGCCAGCTGGAGGGGCAGCTaGTGCCGACTGAGGAGCTGGCCCCCGGTGGCCTGCACCGTCCAG +
Preference number: 5 (lower is better)
Translates to: WLLWMDIAQASWRGS*CRLRSWPPVACTVQ
Trigger: CTGGACGGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCGATGTCCATCCACAAGAGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 90 bp TGGAGGGGCAGCTGCTGCCGACTGAGGAGCTGGCCCCCGGTGGCCTaGACCGTCCAGCGGTCAGCGTGGATGACCTCAGTGACTCCACAC +
Preference number: 5 (lower is better)
Translates to: WRGSCCRLRSWPPVA*TVQRSAWMTSVTPH
Trigger: GTGTGGAGTCACTGAGGTCATCCACGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 90 bp AGCCAGCCCTGCCGCACGCCTGGCCTTTGGGCCAGGGCCACACACTaGGCTAGAGGAGCCTGGCCTGAGCCGATGCCTGCAAAGGCATGG +
Preference number: 5 (lower is better)
Translates to: SQPCRTPGLWARATH*ARGAWPEPMPAKAW
Trigger: CCATGCCTTTGCAGGCATCGGCTCAGGCCAGGCTCCTCTAGCCCAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCGGCAGGGCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 90 bp AGGGTCATGCCTTGGCTCTTGTGGATGGACATCGCCCAGGCCAGCTaGAGGGGCAGCTGCTGCCGACTGAGGAGCTGGCCCCCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RVMPWLLWMDIAQAS*RGSCCRLRSWPPVA
Trigger: GGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCGATGTCCATCCACAAGAGCCAAGGCATGACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 90 bp CTCCACAGCCACGCGGCACCGCAGCTCCGAGTCCTCATATTCCCCTaGCGCCGCCTCTATGCCCGAGAGCATCGTCACCGCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LHSHAAPQLRVLIFP*RRLYAREHRHRLCW
Trigger: CCAGCAGAGGCGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGACTCGGAGCTGCGGTGCCGCGTGGCTGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CCA 90 bp CTGAGGAGCTGGCCCCCGGTGGCCTGCACCGTCCAGCGGTCAGCGTaGATGACCTCAGTGACTCCACACAGGAACCGCACCTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: LRSWPPVACTVQRSA*MTSVTPHRNRTWGS
Trigger: GCTACCCCAGGTGCGGTTCCTGTGTGGAGTCACTGAGGTCATCCACGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCAGCTCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 90 bp GGCACCGCAGCTCCGAGTCCTCATATTCCCCTGCCGCCGCCTCTATaGCCGAGAGCATCGTCACCGCCTCTGCTGGTCTCTGGGTTCGGG +
Preference number: 5 (lower is better)
Translates to: GTAAPSPHIPLPPPL*PRASSPPLLVSGFG
Trigger: CCCGAACCCAGAGACCAGCAGAGGCGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGACTCGGAGCTGCGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS CCA 90 bp TGTCCCTTCTTTCCCGTCCTCACTGTGCTAGGCTCGGCCCCAGCCTaGGGCTCCACAGGCCGCTTCACCAGCGTAGTGTCCGGAACCCGG +
Preference number: 5 (lower is better)
Translates to: CPFFPVLTVLGSAPA*GSTGRFTSVVSGTR
Trigger: CCGGGTTCCGGACACTACGCTGGTGAAGCGGCCTGTGGAGCCCCAGGCTGGGGCCGAGCCTAGCACAGTGAGGACGGGAAAGAAGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560504.1
CDS-3UTR CAA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACGCGGGCCCTGGCGCTaGCAGCCGCAGCATCAACTC +
Preference number: 5 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPRGPWR*QPQHQL
Trigger: GAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCAGGGGCCGCAGCCAGCTaGAGGCGCAATGTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPGAAAS*RRNVRR
Trigger: CCTGCGCACATTGCGCCTCAAGCTGGCTGCGGCCCC...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS GCA 90 bp GGCACCGCAGCTCCGAGTCCTCATATTCCCCTGCCGCCGCCTCTATaGCCGAGAGCATCGTCACCGCCTCTGCTGGTTTGTGCCGACACT +
Preference number: 5 (lower is better)
Translates to: GTAAPSPHIPLPPPL*PRASSPPLLVCADT
Trigger: AGTGTCGGCACAAACCAGCAGAGGCGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGACTCGGAGCTGCGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000560444.1
ENST00000560504.1
CDS GCA 90 bp GAACCGCCATGGGGTCAAAGTCCAGCACACGTAGGCCCTGCAGGCTaGGGGCCCGAGAAAGGGCCACATAGGCCTGGCCACTGGCAAACA +
Preference number: 5 (lower is better)
Translates to: EPPWGQSPAHVGPAG*GPEKGPHRPGHWQT
Trigger: TGTTTGCCAGTGGCCAGGCCTATGTGGCCCTTTCTCGGGCCCGCAGCCTGCAGGGCCTACGTGTGCTGGACTTTGACCCCATGGCGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 90 bp CGGCCCTCAGCACAGCAGCCTGTTCCTCAGAAAGCTGTGGCTTGGTaGAGGGCAAGCTCAGCCTCTTCACAGGCAGGGGCCACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RPSAQQPVPQKAVAW*RASSASSQAGATLG
Trigger: CCCCAAGGTGGCCCCTGCCTGTGAAGAGGCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAACAGGCTGCTGTGCTGAGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
CDS CCA 90 bp GCCTCGTGGCCACAATCCCATCTCGCCCCACCTTGTGGGAAGCTGTaGCCTGGAGCTGGCGGGTCACCTCATCTGAACACCTGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: ASWPQSHLAPPCGKL*PGAGGSPHLNTCLA
Trigger: GGCTAGGCAGGTGTTCAGATGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGGCCACGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 90 bp GGTCTGGTCTGCCTGCCTCCACACCTTGGTCAGCTCCAGGGTCACTaGCACACACCTCTTCCAGCTCTTGGACTGGTGGGGGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GLVCLPPHLGQLQGH*HTPLPALGLVGAGW
Trigger: CCACCCTGCCCCCACCAGTCCAAGAGCTGGAAGAGGTGTGTGCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCAGACCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559872.1
CDS CCA 90 bp GCCTCGTGGCCACAATCCCATCTCGCCCCACCTTGTGGGAAGCTGTaGCCTGGAGCTGGCGGGTCACCTCATCTGAACACCTGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ASWPQSHLAPPCGKL*PGAGGSPHLNTCWG
Trigger: GCCCCAACAGGTGTTCAGATGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGGCCACGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558380.1
CDS CCA 90 bp GGACGGCCCTCAGCACAGCAGCCTGTTCCTCAGAAAGCTGTGGCTTaGTGGAGGGCAAGCTCAGCCTCTTCACAGGCAGGGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: GRPSAQQPVPQKAVA*WRASSASSQAGATL
Trigger: CAAGGTGGCCCCTGCCTGTGAAGAGGCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAACAGGCTGCTGTGCTGAGGGCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
CDS CCA 90 bp TGGGTGCAGAGCCTCGTGGCCACAATCCCATCTCGCCCCACCTTGTaGGAAGCTGTGGCCTGGAGCTGGCGGGTCACCTCATCTGAACAC +
Preference number: 5 (lower is better)
Translates to: WVQSLVATIPSRPTL*EAVAWSWRVTSSEH
Trigger: GTGTTCAGATGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGGCCACGAGGCTCTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CCA 90 bp GCCCACCTGCCTAGCCTCACGGCCTGCAGTAGAGAGATGAAGGTCTaGTCTGCCTGCCTCCACACCTTGGTCAGCTCCAGGGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: AHLPSLTACSREMKV*SACLHTLVSSRVTG
Trigger: GCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGGCCGTGAGGCTAGGCAGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558380.1
CDS GCA 90 bp ATTGAGATCTCGTCAATGACCAACCGCTGGCAGTTCAGCCAGCCCTaGCGCACGCCTGGCCTTTGGGCCAGGGCCACACACTGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: IEISSMTNRWQFSQP*RTPGLWARATHWAR
Trigger: TCTAGCCCAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCGGCAGGGCTGGCTGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 90 bp AACAGGTCTGCCTCCACCATTGAGATCTCGTCAATGACCAACCGCTaGCAGTTCAGCCAGCCCTGCCGCACGCCTGGCCTTTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NRSASTIEISSMTNR*QFSQPCRTPGLWAR
Trigger: CCTGGCCCAAAGGCCAGGCGTGCGGCAGGGCTGGCTGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAATGGTGGAGGCAGACCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 90 bp CCTAGCCTCACGGCCTGCAGTAGAGAGATGAAGGTCTGGTCTGCCTaGCTCCACACCTTGGTCAGCTCCAGGGTCACTGGCACACACCTC +
Preference number: 5 (lower is better)
Translates to: PSLTACSREMKVWSA*LHTLVSSRVTGTHL
Trigger: GAGGTGTGTGCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGGCCGTGAGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
ENST00000559872.1
CDS CCA 90 bp TTTCAGGACGGCCCTCAGCACAGCAGCCTGTTCCTCAGAAAGCTGTaGCTTGGTGGAGGGCAAGCTCAGCCTCTTCACAGGCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: FQDGPQHSSLFLRKL*LGGGQAQPLHRQGP
Trigger: TGGCCCCTGCCTGTGAAGAGGCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAACAGGCTGCTGTGCTGAGGGCCGTCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
CDS CCA 90 bp GGTCTGGTCTGCCTGCCTCCACACCTTGGTCAGCTCCAGGGTCACTaGCACACACCTCTTCCAGCTCTTGGACTGGAAGCAGAACCGTGG +
Preference number: 5 (lower is better)
Translates to: GLVCLPPHLGQLQGH*HTPLPALGLEAEPW
Trigger: CCACGGTTCTGCTTCCAGTCCAAGAGCTGGAAGAGGTGTGTGCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCAGACCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CCA 90 bp CCTTACCTGCCTAGCCTCACGGCCTGCAGTAGAGAGATGAAGGTCTaGTCTGCCTGCCTCCACACCTTGGTCAGCTCCAGGGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: PYLPSLTACSREMKV*SACLHTLVSSRVTG
Trigger: GCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGGCCGTGAGGCTAGGCAGGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559872.1
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACGCGGGCCCTGGCGCTaGCAGCCGCAGCATCAACTC +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAARGPWR*QPQHQL
Trigger: GAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS TCA 90 bp ATCTGTGTACCTTACCTGGCAGCTCCTGAAGCCGCCTCTCGTTGGTaGGGGCCACATCATCCTGGTGGGTGCAGAGCCTCGTGGCCACAA +
Preference number: 5 (lower is better)
Translates to: ICVPYLAAPEAASRW*GPHHPGGCRASWPQ
Trigger: TTGTGGCCACGAGGCTCTGCACCCACCAGGATGATGTGGCCCTCACCAACGAGAGGCGGCTTCAGGAGCTGCCAGGTAAGGTACACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS GCA 90 bp GTCACCGCCTCTGCTGGTCTCTGGGTTCGGGCAGACACTCACTTGTaGCGACACTCAGATGAACAAGCAGATCGTAGCCGGCCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: VTASAGLWVRADTHL*RHSDEQADRSRPVA
Trigger: AGCCACAGGCCGGCTACGATCTGCTTGTTCATCTGAGTGTCGGCACAAGTGAGTGTCTGCCCGAACCCAGAGACCAGCAGAGGCGGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS CCA 90 bp GCAGGAGGACGGGGAGGCCACAGGCCACCCTTTGTCTTCTCTTTGTaGGTGAGGCTCAGAGGATTGGGTCCATGTTCTCCTGGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: AGGRGGHRPPFVFSL*VRLRGLGPCSPGLR
Trigger: CCTCAGACCAGGAGAACATGGACCCAATCCTCTGAGCCTCACCCACAAAGAGAAGACAAAGGGTGGCCTGTGGCCTCCCCGTCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAAACTCGCGGCGCTCGTaGCGACCCAGGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAANSRRS*RPRLSS
Trigger: GGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGTT...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGGGGCCGCAGCCAGCTaGAGGCGCAATGTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQGAAAS*RRNVRR
Trigger: CCTGCGCACATTGCGCCTCAAGCTGGCTGCGGCCCC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCATCAGAAAGCTGTGGCTaGGTGGAGGGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPSESCG*VEGKLS
Trigger: GCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGA...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCCGCACGCCTGGCCTTaGGGCCAGGGCCACACACTG +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQPHAWP*GQGHTL
Trigger: CAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCGG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGGGGGCTGGGAGCCCTaGGTCACAGGTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQGGWEP*VTGGSC
Trigger: GCAGCTGCCACCTGTGACCAAGGGCTCCCAGCCCCC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS CCA 90 bp TTGGTCACAGGTGGCAGCTGCAGAAAGTCCCCACAGATGATGAGCTaGATCCCTCCGAATGGCTTGTTCTGCTGCCGGACAGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: LVTGGSCRKSPQMMS*IPPNGLFCCRTALA
Trigger: GGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTCATCATCTGTGGGGACTTTCTGCAGCTGCCACCTGTGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000558547.1
ENST00000559239.2
CDS CCA 90 bp TCCTCTCTGCCCCCACTACCTGCACTCCCAGTGAAGAAGATGCTCTaGCCTTTCAGGACGGCCCTCAGCACAGCAGCCTGTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SSLPPLPALPVKKML*PFRTALSTAACSSE
Trigger: TTCTGAGGAACAGGCTGCTGTGCTGAGGGCCGTCCTGAAAGGCCAGAGCATCTTCTTCACTGGGAGTGCAGGTAGTGGGGGCAGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560444.1
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGCCGCACGCCTGGCCTTaGGGCCAGGGCCACACACTG +
Preference number: 5 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQPHAWP*GQGHTL
Trigger: CAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCGG...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS TCA 90 bp TCTGGCCACGGCCTCCAGTTTGTCAAACAGGTCTGCCTCCACCATTaGGATCTCGTCAATGACCAACCGCTGGCAGTTCAGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SGHGLQFVKQVCLHH*DLVNDQPLAVQPAL
Trigger: CAGGGCTGGCTGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAATGGTGGAGGCAGACCTGTTTGACAAACTGGAGGCCGTGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS-3UTR CAA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAAACTCGCGGCGCTCGTaGCGACCCAGGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ALSSDISYHTGSFSTGTENSRRS*RPRLSS
Trigger: GGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGTT...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGCCATCTCGCCCCACCTaGTGGGAAGCTGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQPSRPT*WEAVAW
Trigger: CCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGG...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp TACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCCACCCTTTGTCTTCTCTTaGTGGGTGAGGCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: YRRGHCLPTPVIPWGPGPPFVFS*WVRLRG
Trigger: TCCTCTGAGCCTCACCCACAAAGAGAAGACAAAGGG...TGGCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GCCTCTCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTCACCTCTTCCAGCTCTaGGACTGGAAGCAGAACCGT +
Preference number: 5 (lower is better)
Translates to: ASPFCSLKGGMFRTLQLCHLFQL*DWKQNR
Trigger: ACGGTTCTGCTTCCAGTCCAAGAGCTGGAAGAGGTG...ACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACCATCTCGCCCCACCTaGTGGGAAGCTGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PCRELCPLTSATTQAHSQPSRPT*WEAVAW
Trigger: CCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGG...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp AATACAGAAGGGGACACTGCCTGCCTACTCCAGTTATTCCCTGGGGCCCTGGGCATCCAGGGTCATGCCTaGGCTCTTGTGGATGGACAT +
Preference number: 5 (lower is better)
Translates to: NTEGDTACLLQLFPGALGIQGHA*ALVDGH
Trigger: ATGTCCATCCACAAGAGCCAAGGCATGACCCTGGAT...GCCCAGGGCCCCAGGGAATAACTGGAGTAGGCAGGCAGTGTCCCCTTCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAGAGCACCTGTCTTCATaGCCTCTCCCTTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLLQPERRDVQDSAALCPEHLSS*PLPSAA
Trigger: GGCTGCAGAAGGGAGAGGCAATGAAGACAGGTGCTC...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGGCTCTGAAGGGTGTTaGTTCTGGGCTGGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAGSEGC*FWAGLG
Trigger: GCCTAGCCCAGCCCAGAACAAACACCCTTCAGAGCC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAGTCATGCCTTGGCTCTaGTGGATGGACATCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAVMPWL*WMDIAQ
Trigger: CTGGGCGATGTCCATCCACAAGAGCCAAGGCATGAC...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCAGTGAGGCTCAGAGGATaGGGTCCATGTTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SLLQPERRDVQDSAALCPVRLRG*GPCSPG
Trigger: ACCAGGAGAACATGGACCCAATCCTCTGAGCCTCAC...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCAAGTTCCGTTCTCTGTTaGGAGGCTGCACCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAASSVLC*EAAPSL
Trigger: CAGGCTGGGTGCAGCCTCCAAACAGAGAACGGAACT...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS CCA 90 bp AGATATGACTTCCCTGTTCCTGCACTCCCAGTGAAGAAGATGCTCTaGCCTTTCAGGACGGCCCTCAGCACAGCAGCCTGTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: RYDFPVPALPVKKML*PFRTALSTAACSSE
Trigger: TTCTGAGGAACAGGCTGCTGTGCTGAGGGCCGTCCTGAAAGGCCAGAGCATCTTCTTCACTGGGAGTGCAGGAACAGGGAAGTCATATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS-3UTR CAA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGCCACGGCCTCCAGTTaGTCAAACAGGTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PCRELCPLTSATTQAHSQATASS*SNRSAS
Trigger: GGAGGCAGACCTGTTTGACAAACTGGAGGCCGTGGC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGGCCACGGCCTCCAGTTaGTCAAACAGGTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQATASS*SNRSAS
Trigger: GGAGGCAGACCTGTTTGACAAACTGGAGGCCGTGGC...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACACCTCTTCCAGCTCTaGGACTGGAAGCAGAACCGT +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAHLFQL*DWKQNR
Trigger: ACGGTTCTGCTTCCAGTCCAAGAGCTGGAAGAGGTG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGTCATGCCTTGGCTCTaGTGGATGGACATCGCCCAG +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQVMPWL*WMDIAQ
Trigger: CTGGGCGATGTCCATCCACAAGAGCCAAGGCATGAC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp TCCCTTCTGCAGCCTGAAAGGAGGGATGTTCAGGACTCTGCAGCTCTGTGTCCACCCTTGCAGAGAGCTTaGTCCTCTGACATCAGCTAC +
Preference number: 5 (lower is better)
Translates to: SLLQPERRDVQDSAALCPPLQRA*SSDISY
Trigger: GTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGGG...TGGACACAGAGCTGCAGAGTCCTGAACATCCCTCCTTTCAGGCTGCAGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGGAGCACCTGTCTTCATaGCCTCTCCCTTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQEHLSS*PLPSAA
Trigger: GGCTGCAGAAGGGAGAGGCAATGAAGACAGGTGCTC...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CCTTGCAGAGAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAAGGCTCTGAAGGGTGTTaGTTCTGGGCTGGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: PCRELCPLTSATTQAHSQGSEGC*FWAGLG
Trigger: GCCTAGCCCAGCCCAGAACAAACACCCTTCAGAGCC...TTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACGGGCAGACACTCACTaGTGCCGACACTCAGATGAA +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAARADTH*CRHSDE
Trigger: TTCATCTGAGTGTCGGCACAAGTGAGTGTCTGCCCG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGACCGCCTCTGCTGGTTaGTGCCGACACTCAGATGAA +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQTASAG*CRHSDE
Trigger: TTCATCTGAGTGTCGGCACAAACCAGCAGAGGCGGT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268043.8
CDS-3UTR CAA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAATCAGAAAGCTGTGGCTaGGTGGAGGGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALSSDISYHTGSFSTGTESESCG*VEGKLS
Trigger: GCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGA...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp ACACAGGCTCATTCTCAACTGGCACAGAAAGGGTTACTTCTGACCCTACAGCAGATCCCTCCGAATGGCTaGTTCTGCTGCCGGACAGCT +
Preference number: 5 (lower is better)
Translates to: TQAHSQLAQKGLLLTLQQIPPNG*FCCRTA
Trigger: AGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGAT...CTGCTGTAGGGTCAGAAGTAACCCTTTCTGTGCCAGTTGAGAATGAGCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp CTGGGCCTAGCTGTAGAGACACACCTAAGTTCCGTTCTCTGTTTGGAGGCTGCACCCTTGCAGAGAGCTTaGTCCTCTGACATCAGCTAC +
Preference number: 5 (lower is better)
Translates to: LGLAVETHLSSVLCLEAAPLQRA*SSDISY
Trigger: GTAGCTGATGTCAGAGGACAAAGCTCTCTGCAAGGG...TGCAGCCTCCAAACAGAGAACGGAACTTAGGTGTGTCTCTACAGCTAGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAAAGTTCCGTTCTCTGTTaGGAGGCTGCACCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ALSSDISYHTGSFSTGTESSVLC*EAAPSL
Trigger: CAGGCTGGGTGCAGCCTCCAAACAGAGAACGGAACT...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAACTGGCCAGCTCAGGGTaGCTGTCCATAGCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: ALSSDISYHTGSFSTGTELASSG*LSIASN
Trigger: ATTTGAGGCTATGGACAGCAACCCTGAGCTGGCCAG...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GAGCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGATCCAGGGTCATGCCTaGGCTCTTGTGGATGGACAT +
Preference number: 5 (lower is better)
Translates to: ELCPLTSATTQAHSQLAQIQGHA*ALVDGH
Trigger: ATGTCCATCCACAAGAGCCAAGGCATGACCCTGGAT...CTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS CCA 90 bp ACTGAATCCCAATCCTTAGCTCTGCCACTGGCTGCCTGTGACCCCTaGGGCAAGTTGCCTTATCTTCCTCGGTCCCAATTTTTCTTTATG +
Preference number: 5 (lower is better)
Translates to: TESQSLALPLAACDP*GKLPYLPRSQFFFM
Trigger: CATAAAGAAAAATTGGGACCGAGGAAGATAAGGCAACTTGCCCCAGGGGTCACAGGCAGCCAGTGGCAGAGCTAAGGATTGGGATTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559522.1
CDS-3UTR CAA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGACTGGCCAGCTCAGGGTaGCTGTCCATAGCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRLASSG*LSIASN
Trigger: ATTTGAGGCTATGGACAGCAACCCTGAGCTGGCCAG...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp AGCTGGTATATGGGTTTAAAGTACTCTCCCTTTAACCCTGCCAGGAGGCTGAGAGTGAGGCTCAGAGGATaGGGTCCATGTTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SWYMGLKYSPFNPARRLRVRLRG*GPCSPG
Trigger: ACCAGGAGAACATGGACCCAATCCTCTGAGCCTCAC...TCTCAGCCTCCTGGCAGGGTTAAAGGGAGAGTACTTTAAACCCATATACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS-3UTR CAA 90 bp GCTTTGTCCTCTGACATCAGCTACCACACAGGCTCATTCTCAACTGGCACAGAACCCTTTGTCTTCTCTTaGTGGGTGAGGCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: ALSSDISYHTGSFSTGTEPFVFS*WVRLRG
Trigger: TCCTCTGAGCCTCACCCACAAAGAGAAGACAAAGGG...TTCTGTGCCAGTTGAGAATGAGCCTGTGTGGTAGCTGATGTCAGAGGACAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268043.8
ENST00000559239.2
CDS TCA 90 bp TACACTATAACAACCACAGGCACAATTCCCACACCCCTGTCATACTaGGATGTCAGATGGGTATCAAATACCCACACCGGCTTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: YTITTTGTIPTPLSY*DVRWVSNTHTGFPS
Trigger: TGAGGGGAAGCCGGTGTGGGTATTTGATACCCATCTGACATCTCAGTATGACAGGGGTGTGGGAATTGTGCCTGTGGTTGTTATAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560504.1
CDS CAA 72 bp GCGGAGGCCGGCCCGGGACCCGGGGCCGCAGCCAGCTaGAGGCGCAATGTGCGCAGGAAGCGGCGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: AEAGPGPGAAAS*RRNVRRKRRRR
Trigger: CCGCCTGCGCCGCTTCCTGCGCACATTGCGCCTCAAGCTGGCTGCGGCCCCGGGTCCCGGGCCGGCCTCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CCA 72 bp TTGCGACCCAGGCTCAGCTCCGCGGTGCGCAGGGCCTaGCGCCTTCGCGGCTGCCCGCCCGGGCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LRPRLSSAVRRA*RLRGCPPGLSS
Trigger: GGAGCTGAGCCCGGGCGGGCAGCCGCGAAGGCGCCAGGCCCTGCGCACCGCGGAGCTGAGCCTGGGTCGCAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CAA 90 bp GGCGCGCAGAGGAAAGCAGCGCGGCCGCCCCGCGGGCCCTGGCGCTaGCAGCCGCAGCATCAACTCGCGGCGCTCGTTGCGACCCAGGCT +
Preference number: 6 (lower is better)
Translates to: GAQRKAARPPRGPWR*QPQHQLAALVATQA
Trigger: AGCCTGGGTCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCGGGGCGGCCGCGCTGCTTTCCTCTGCGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS TCA 72 bp GCCGCAGGGTGCTGCGCCCGGCCTCGGCGAAACGCGTaGAGAGGCGCGCGGCGCGCAGAGGAAAGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: AAGCCARPRRNA*RGARRAEESSA
Trigger: CGCGCTGCTTTCCTCTGCGCGCCGCGCGCCTCTTCACGCGTTTCGCCGAGGCCGGGCGCAGCACCCTGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 72 bp ACCCGGGTGGCCGCCCTGAGCCGCCGCTCCTCGGGCTaGACAGGGCTGATGGTGACGAAGTCGCGGGGCCGC +
Preference number: 6 (lower is better)
Translates to: TRVAALSRRSSG*TGLMVTKSRGR
Trigger: GCGGCCCCGCGACTTCGTCACCATCAGCCCTGTGCAGCCCGAGGAGCGGCGGCTCAGGGCGGCCACCCGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CCA 72 bp GCGCAGAGGAAAGCAGCGCGGCCGCCCCGCGGGCCCTaGCGCTTGCAGCCGCAGCATCAACTCGCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: AQRKAARPPRGP*RLQPQHQLAAL
Trigger: GAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCGGGGCGGCCGCGCTGCTTTCCTCTGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 72 bp GGAAAGCAGCGCGGCCGCCCCGCGGGCCCTGGCGCTTaGAGCCGCAGCATCAACTCGCGGCGCTCGTTGCGA +
Preference number: 6 (lower is better)
Translates to: GKQRGRPAGPGA*SRSINSRRSLR
Trigger: TCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCGGGGCGGCCGCGCTGCTTTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CAA 72 bp AGGAAAGCAGCGCGGCCGCCCCGCGGGCCCTGGCGCTaGCAGCCGCAGCATCAACTCGCGGCGCTCGTTGCG +
Preference number: 6 (lower is better)
Translates to: RKAARPPRGPWR*QPQHQLAALVA
Trigger: CGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGCGGGGCGGCCGCGCTGCTTTCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CAA 90 bp GCGGGCCCTGGCGCTTGCAGCCGCAGCATCAACTCGCGGCGCTCGTaGCGACCCAGGCTCAGCTCCGCGGTGCGCAGGGCCTGGCGCCTT +
Preference number: 6 (lower is better)
Translates to: AGPGACSRSINSRRS*RPRLSSAVRRAWRL
Trigger: AAGGCGCCAGGCCCTGCGCACCGCGGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGCCAGGGCCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 72 bp GCGCTTGCAGCCGCAGCATCAACTCGCGGCGCTCGTTaGGACCCAGGCTCAGCTCCGCGGTGCGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: ALAAAASTRGAR*DPGSAPRCAGP
Trigger: AGGCCCTGCGCACCGCGGAGCTGAGCCTGGGTCGCAACGAGCGCCGCGAGTTGATGCTGCGGCTGCAAGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS GCA 72 bp TGGATGGACATCGCCCAGGCCAGCTGGAGGGGCAGCTaGTGCCGACTGAGGAGCTGGCCCCCGGTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: WMDIAQASWRGS*CRLRSWPPVAC
Trigger: GCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCTGCCCCTCCAGCTGGCCTGGGCGATGTCCATCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 72 bp AGCTGCTGCCGACTGAGGAGCTGGCCCCCGGTGGCCTaGACCGTCCAGCGGTCAGCGTGGATGACCTCAGTG +
Preference number: 6 (lower is better)
Translates to: SCCRLRSWPPVA*TVQRSAWMTSV
Trigger: CACTGAGGTCATCCACGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCAGCTCCTCAGTCGGCAGCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 72 bp TGGCAGTTCAGCCAGCCCTGCCGCACGCCTGGCCTTTaGGCCAGGGCCACACACTGGGCTAGAGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: WQFSQPCRTPGL*ARATHWARGAW
Trigger: CCAGGCTCCTCTAGCCCAGTGTGTGGCCCTGGCCCAAAGGCCAGGCGTGCGGCAGGGCTGGCTGAACTGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS GCA 72 bp CACGCGGCACCGCAGCTCCGAGTCCTCATATTCCCCTaGCGCCGCCTCTATGCCCGAGAGCATCGTCACCGC +
Preference number: 6 (lower is better)
Translates to: HAAPQLRVLIFP*RRLYAREHRHR
Trigger: GCGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGACTCGGAGCTGCGGTGCCGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
ENST00000560504.1
CDS CCA 72 bp TGGCCCCCGGTGGCCTGCACCGTCCAGCGGTCAGCGTaGATGACCTCAGTGACTCCACACAGGAACCGCACC +
Preference number: 6 (lower is better)
Translates to: WPPVACTVQRSA*MTSVTPHRNRT
Trigger: GGTGCGGTTCCTGTGTGGAGTCACTGAGGTCATCCACGCTGACCGCTGGACGGTGCAGGCCACCGGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000559522.1
CDS CAA 72 bp CAGAGCCTCGTGGCCACAATCCCATCTCGCCCCACCTaGTGGGAAGCTGTGGCCTGGAGCTGGCGGGTCACC +
Preference number: 6 (lower is better)
Translates to: QSLVATIPSRPT*WEAVAWSWRVT
Trigger: GGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGGCCACGAGGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CCA 72 bp CTTTGGGCCAGGGCCACACACTGGGCTAGAGGAGCCTaGCCTGAGCCGATGCCTGCAAAGGCATGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: LWARATHWARGA*PEPMPAKAWRV
Trigger: CACCCTCCATGCCTTTGCAGGCATCGGCTCAGGCCAGGCTCCTCTAGCCCAGTGTGTGGCCCTGGCCCAAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 72 bp AGCCTCGTGGCCACAATCCCATCTCGCCCCACCTTGTaGGAAGCTGTGGCCTGGAGCTGGCGGGTCACCTCA +
Preference number: 6 (lower is better)
Translates to: SLVATIPSRPTL*EAVAWSWRVTS
Trigger: TGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGGCCACGAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CCA 72 bp TTACCTGCAAAGGCATGGAGGGTGGTGCCCCCGATGTaGCAGGCTGCCACCCCAGTGCTGGCAGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: LPAKAWRVVPPM*QAATPVLAVAT
Trigger: TGTGGCCACTGCCAGCACTGGGGTGGCAGCCTGCCACATCGGGGGCACCACCCTCCATGCCTTTGCAGGTAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560444.1
CDS TCA 72 bp CCTTACCTGGCAGCTCCTGAAGCCGCCTCTCGTTGGTaGGGGCCACATCATCCTGGTGGGTGCAGAGCCTCG +
Preference number: 6 (lower is better)
Translates to: PYLAAPEAASRW*GPHHPGGCRAS
Trigger: CGAGGCTCTGCACCCACCAGGATGATGTGGCCCTCACCAACGAGAGGCGGCTTCAGGAGCTGCCAGGTAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS GCA 72 bp GCTCCGAGTCCTCATATTCCCCTGCCGCCGCCTCTATaGCCGAGAGCATCGTCACCGCCTCTGCTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: APSPHIPLPPPL*PRASSPPLLVS
Trigger: AGAGACCAGCAGAGGCGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGACTCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS CCA 72 bp AGAAGTGCAGCACACGGGGGTCACAGCGAACCGCCATaGGGTCAAAGTCCAGCACACGTAGGCCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: RSAAHGGHSEPP*GQSPAHVGPAG
Trigger: GCCTGCAGGGCCTACGTGTGCTGGACTTTGACCCCATGGCGGTTCGCTGTGACCCCCGTGTGCTGCACTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CAA 90 bp TGGTGGGTGCAGAGCCTCGTGGCCACAATCCCATCTCGCCCCACCTaGTGGGAAGCTGTGGCCTGGAGCTGGCGGGTCACCTCATCTGAA +
Preference number: 6 (lower is better)
Translates to: WWVQSLVATIPSRPT*WEAVAWSWRVTSSE
Trigger: TTCAGATGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGGCCACGAGGCTCTGCACCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CAA 90 bp AGGACGGCCCTCAGCACAGCAGCCTGTTCCTCAGAAAGCTGTGGCTaGGTGGAGGGCAAGCTCAGCCTCTTCACAGGCAGGGGCCACCTT +
Preference number: 6 (lower is better)
Translates to: RTALSTAACSSESCG*VEGKLSLFTGRGHL
Trigger: AAGGTGGCCCCTGCCTGTGAAGAGGCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAACAGGCTGCTGTGCTGAGGGCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
CDS GCA 72 bp GCTCCGAGTCCTCATATTCCCCTGCCGCCGCCTCTATaGCCGAGAGCATCGTCACCGCCTCTGCTGGTTTGT +
Preference number: 6 (lower is better)
Translates to: APSPHIPLPPPL*PRASSPPLLVC
Trigger: ACAAACCAGCAGAGGCGGTGACGATGCTCTCGGGCATAGAGGCGGCGGCAGGGGAATATGAGGACTCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000560444.1
ENST00000560504.1
CDS GCA 72 bp TGTCAGGGCAGAGCCCACCTGCCTAGCCTCACGGCCTaGAGTAGAGAGATGAAGGTCTGGTCTGCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: CQGRAHLPSLTA*SREMKVWSACL
Trigger: GAGGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGGCCGTGAGGCTAGGCAGGTGGGCTCTGCCCTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558380.1
CDS CCA 72 bp GCACAGCAGCCTGTTCCTCAGAAAGCTGTGGCTTGGTaGAGGGCAAGCTCAGCCTCTTCACAGGCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: AQQPVPQKAVAW*RASSASSQAGA
Trigger: GGCCCCTGCCTGTGAAGAGGCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAACAGGCTGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
CDS CCA 72 bp GCCTCCACCATTGAGATCTCGTCAATGACCAACCGCTaGCAGTTCAGCCAGCCCTGCCGCACGCCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: ASTIEISSMTNR*QFSQPCRTPGL
Trigger: AAGGCCAGGCGTGCGGCAGGGCTGGCTGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAATGGTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
CDS CCA 72 bp CCACAATCCCATCTCGCCCCACCTTGTGGGAAGCTGTaGCCTGGAGCTGGCGGGTCACCTCATCTGAACACC +
Preference number: 6 (lower is better)
Translates to: PQSHLAPPCGKL*PGAGGSPHLNT
Trigger: GGTGTTCAGATGAGGTGACCCGCCAGCTCCAGGCCACAGCTTCCCACAAGGTGGGGCGAGATGGGATTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CCA 72 bp TGCCTGCCTCCACACCTTGGTCAGCTCCAGGGTCACTaGCACACACCTCTTCCAGCTCTTGGACTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: CLPPHLGQLQGH*HTPLPALGLVG
Trigger: CCCCACCAGTCCAAGAGCTGGAAGAGGTGTGTGCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559872.1
CDS CCA 72 bp TCAAGCCCTAGGGGTTCCTACTTACCTGCAAAGGCATaGAGGGTGGTGCCCCCGATGTGGCAGGCTGCCACC +
Preference number: 6 (lower is better)
Translates to: SSPRGSYLPAKA*RVVPPMWQAAT
Trigger: GGTGGCAGCCTGCCACATCGGGGGCACCACCCTCCATGCCTTTGCAGGTAAGTAGGAACCCCTAGGGCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560444.1
CDS CAA 72 bp TCCCCACAGATGATGAGCTGGATCCCTCCGAATGGCTaGTTCTGCTGCCGGACAGCTCTGGCCACGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPQMMSWIPPNG*FCCRTALATAS
Trigger: GGAGGCCGTGGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTCATCATCTGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000558547.1
ENST00000559239.2
CDS GCA 72 bp ACGGCCTGCAGTAGAGAGATGAAGGTCTGGTCTGCCTaGCTCCACACCTTGGTCAGCTCCAGGGTCACTGGC +
Preference number: 6 (lower is better)
Translates to: TACSREMKVWSA*LHTLVSSRVTG
Trigger: GCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
ENST00000559872.1
CDS CCA 72 bp GGCCCTCAGCACAGCAGCCTGTTCCTCAGAAAGCTGTaGCTTGGTGGAGGGCAAGCTCAGCCTCTTCACAGG +
Preference number: 6 (lower is better)
Translates to: GPQHSSLFLRKL*LGGGQAQPLHR
Trigger: CCTGTGAAGAGGCTGAGCTTGCCCTCCACCAAGCCACAGCTTTCTGAGGAACAGGCTGCTGTGCTGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000559239.2
ENST00000560444.1
CDS TCA 72 bp TCAGAGGCTGAGGGCAGGGAGCTGTCATGGGGACACTaGATCCCAATCCTTAGCTCTGCCACTGGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SEAEGRELSWGH*IPILSSATGCL
Trigger: CAGGCAGCCAGTGGCAGAGCTAAGGATTGGGATTCAGTGTCCCCATGACAGCTCCCTGCCCTCAGCCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559522.1
CDS GCA 72 bp CAGATGATGAGCTGGATCCCTCCGAATGGCTTGTTCTaGTGCCGGACAGCTCTGGCCACGGCCTCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: QMMSWIPPNGLF*CRTALATASSL
Trigger: CAAACTGGAGGCCGTGGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTCATCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000558547.1
ENST00000559239.2
CDS CCA 72 bp TGCCTGCCTCCACACCTTGGTCAGCTCCAGGGTCACTaGCACACACCTCTTCCAGCTCTTGGACTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: CLPPHLGQLQGH*HTPLPALGLEA
Trigger: TGCTTCCAGTCCAAGAGCTGGAAGAGGTGTGTGCCAGTGACCCTGGAGCTGACCAAGGTGTGGAGGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS CAA 90 bp ATCGTCACCGCCTCTGCTGGTCTCTGGGTTCGGGCAGACACTCACTaGTGCCGACACTCAGATGAACAAGCAGATCGTAGCCGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: IVTASAGLWVRADTH*CRHSDEQADRSRPV
Trigger: CACAGGCCGGCTACGATCTGCTTGTTCATCTGAGTGTCGGCACAAGTGAGTGTCTGCCCGAACCCAGAGACCAGCAGAGGCGGTGACGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS CAA 90 bp TGCAGAAAGTCCCCACAGATGATGAGCTGGATCCCTCCGAATGGCTaGTTCTGCTGCCGGACAGCTCTGGCCACGGCCTCCAGTTTGTCA +
Preference number: 6 (lower is better)
Translates to: CRKSPQMMSWIPPNG*FCCRTALATASSLS
Trigger: TGACAAACTGGAGGCCGTGGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTCATCATCTGTGGGGACTTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000558547.1
ENST00000559239.2
CDS GCA 72 bp ATGATGAGCTGGATCCCTCCGAATGGCTTGTTCTGCTaGCGGACAGCTCTGGCCACGGCCTCCAGTTTGTCA +
Preference number: 6 (lower is better)
Translates to: MMSWIPPNGLFC*RTALATASSLS
Trigger: TGACAAACTGGAGGCCGTGGCCAGAGCTGTCCGGCAGCAGAACAAGCCATTCGGAGGGATCCAGCTCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000558547.1
ENST00000559239.2
CDS CAA 90 bp TGGCTAACAGGACACTGGGCATCCAGGGTACTGGCCAGCTCAGGGTaGCTGTCCATAGCCTCAAATCTGTGTACCTTACCTGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WLTGHWASRVLASSG*LSIASNLCTLPGSS
Trigger: GGAGCTGCCAGGTAAGGTACACAGATTTGAGGCTATGGACAGCAACCCTGAGCTGGCCAGTACCCTGGATGCCCAGTGTCCTGTTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS GCA 72 bp TCTGCTGGTCTCTGGGTTCGGGCAGACACTCACTTGTaGCGACACTCAGATGAACAAGCAGATCGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: SAGLWVRADTHL*RHSDEQADRSR
Trigger: CCGGCTACGATCTGCTTGTTCATCTGAGTGTCGGCACAAGTGAGTGTCTGCCCGAACCCAGAGACCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559239.2
CDS CAA 90 bp CCTCTTTATGCAGACCTCCCCTCTCTCCCTTCCCAGAAGCTGGGCTaGCTCTTAGCTCAAGCCCTAGGGGTTCCTACTTACCTGCAAAGG +
Preference number: 6 (lower is better)
Translates to: PLYADLPSLPSQKLG*LLAQALGVPTYLQR
Trigger: CCTTTGCAGGTAAGTAGGAACCCCTAGGGCTTGAGCTAAGAGCAAGCCCAGCTTCTGGGAAGGGAGAGAGGGGAGGTCTGCATAAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560444.1
CDS TCA 72 bp GGCTTGGTTATAGGTACATCTGTGGACCACAGATCTTaGGGGATGGCCTCTAGGTCCTGCCACCCCTCTCAG +
Preference number: 6 (lower is better)
Translates to: GLVIGTSVDHRS*GMASRSCHPSQ
Trigger: CTGAGAGGGGTGGCAGGACCTAGAGGCCATCCCTCAAGATCTGTGGTCCACAGATGTACCTATAACCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559522.1
CDS GCA 72 bp CAAATCTGTGTACCTTACCTGCCTAGCCTCACGGCCTaGAGTAGAGAGATGAAGGTCTGGTCTGCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: QICVPYLPSLTA*SREMKVWSACL
Trigger: GAGGCAGGCAGACCAGACCTTCATCTCTCTACTGCAGGCCGTGAGGCTAGGCAGGTAAGGTACACAGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559872.1
CDS CAA 72 bp GGACACTGGGCATCCAGGGTACTGGCCAGCTCAGGGTaGCTGTCCATAGCCTCAAATCTGTGTACCTTACCT +
Preference number: 6 (lower is better)
Translates to: GHWASRVLASSG*LSIASNLCTLP
Trigger: AGGTAAGGTACACAGATTTGAGGCTATGGACAGCAACCCTGAGCTGGCCAGTACCCTGGATGCCCAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
ENST00000559872.1
CDS TCA 72 bp GGCCTCCAGTTTGTCAAACAGGTCTGCCTCCACCATTaGGATCTCGTCAATGACCAACCGCTGGCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: GLQFVKQVCLHH*DLVNDQPLAVQ
Trigger: CTGAACTGCCAGCGGTTGGTCATTGACGAGATCTCAATGGTGGAGGCAGACCTGTTTGACAAACTGGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268043.8
ENST00000333425.10
ENST00000558380.1
ENST00000559239.2
CDS TCA 72 bp ACAACCACAGGCACAATTCCCACACCCCTGTCATACTaGGATGTCAGATGGGTATCAAATACCCACACCGGC +
Preference number: 6 (lower is better)
Translates to: TTTGTIPTPLSY*DVRWVSNTHTG
Trigger: GCCGGTGTGGGTATTTGATACCCATCTGACATCTCAGTATGACAGGGGTGTGGGAATTGTGCCTGTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560504.1