RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIEZO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000154864

Ensembl transcript IDs: ENST00000302079.10, ENST00000383408.6, ENST00000503781.7, ENST00000538948.5, ENST00000578145.1, ENST00000579112.1, ENST00000579151.1, ENST00000579899.1, ENST00000579949.2, ENST00000580640.5, ENST00000581680.1, ENST00000582913.5, ENST00000582937.1, ENST00000583325.1, ENST00000674853.1

Found 1654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCACCCATGGCTCCCACATCGTACCCAGTGGCCTCGTACTCCTTaGCCTCCCTGGGCTCAGGCGCCGTGCTCCCTGCCTCCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: RHPWLPHRTQWPRTP*PPWAQAPCSLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGGGAGCCATGGGTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GGCTCGGAGCTGCTGCCGGAGCGCTTCCTCCGGACAGCTGTCTGCTaGTCCGGGAAGGTCACATGCACTGACTCCACAGACGCGGCCAGG +
Preference number: 1 (lower is better)
Translates to: GSELLPERFLRTAVC*SGKVTCTDSTDAAR
Trigger: CCTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GATGGCTCGGAGCTGCTGCCGGAGCGCTTCCTCCGGACAGCTGTCTaGTGCTCCGGGAAGGTCACATGCACTGACTCCACAGACGCGGCC +
Preference number: 1 (lower is better)
Translates to: DGSELLPERFLRTAV*CSGKVTCTDSTDAA
Trigger: GGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GATGCTGGACCCCAGCTTGTCGGTGCGGCTGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGA +
Preference number: 1 (lower is better)
Translates to: DAGPQLVGAAVVRAD*HTVLACRVVLRAEG
Trigger: TCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGACAAGCTGGGGTCCAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp CCGTGCTCCCTGCCTCCTCCTCCTGCTCAGCCTCCACCTCCTCGATaGTCTCAGTGGTCCCCTGGCGTGAGTACAGCATGGTACACTGCG +
Preference number: 1 (lower is better)
Translates to: PCSLPPPPAQPPPPR*SQWSPGVSTAWYTA
Trigger: CGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGGCTGAGCAGGAGGAGGAGGCAGGGAGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp GTAAGATGCTGGACCCCAGCTTGTCGGTGCGGCTGTCGTCCGGGCTaGCTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGA +
Preference number: 1 (lower is better)
Translates to: VRCWTPACRCGCRPG*LPYGSCLQSRPASR
Trigger: TCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGACAAGCTGGGGTCCAGCATCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GTCGGTGCGGCTGTCGTCCGGGCTGACTGCCATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGAAGCTCAC +
Preference number: 1 (lower is better)
Translates to: VGAAVVRADCHTVLA*RVVLRAEGQMLEAH
Trigger: GTGAGCTTCGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp AGTCGTCCTGCGAGCCGAAGGACAGATGCTCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAGA +
Preference number: 1 (lower is better)
Translates to: SRPASRRTDARSSQP*CRRVGPPHPRPRWR
Trigger: TCTCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTCGCAGGACGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GGGATCTGTTTGAAGAAAAGCTGGATCTCTGGGATGGCTCGGAGCTaGTGCCGGAGCGCTTCCTCCGGACAGCTGTCTGCTGCTCCGGGA +
Preference number: 1 (lower is better)
Translates to: GICLKKSWISGMARS*CRSASSGQLSAAPG
Trigger: TCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp TCCTCCTGCTCAGCCTCCACCTCCTCGATGGTCTCAGTGGTCCCCTaGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCT +
Preference number: 1 (lower is better)
Translates to: SSCSASTSSMVSVVP*REYSMVHCVGSLDA
Trigger: AGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGGCTGAGCAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GAGCGCTTCCTCCGGACAGCTGTCTGCTGCTCCGGGAAGGTCACATaGACTGACTCCACAGACGCGGCCAGGTTGATGGACTTGAGAGAA +
Preference number: 1 (lower is better)
Translates to: ERFLRTAVCCSGKVT*TDSTDAARLMDLRE
Trigger: TTCTCTCAAGTCCATCAACCTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp ATCTGTTTGAAGAAAAGCTGGATCTCTGGGATGGCTCGGAGCTGCTaGCGGAGCGCTTCCTCCGGACAGCTGTCTGCTGCTCCGGGAAGG +
Preference number: 1 (lower is better)
Translates to: ICLKKSWISGMARSC*RSASSGQLSAAPGR
Trigger: CCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp CTTCCTCCGGACAGCTGTCTGCTGCTCCGGGAAGGTCACATGCACTaGCTCCACAGACGCGGCCAGGTTGATGGACTTGAGAGAATCGGA +
Preference number: 1 (lower is better)
Translates to: LPPDSCLLLREGHMH*LHRRGQVDGLERIG
Trigger: TCCGATTCTCTCAAGTCCATCAACCTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp GCCAGGTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATaGCCGAGGGAGAGCTCATCATCTGATTCCTCCCTGGCCATGCCA +
Preference number: 1 (lower is better)
Translates to: ARLMDLRESEESLLP*PRESSSSDSSLAMP
Trigger: TGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp CTTGTGCTGCCTCTTTGGGATCTGTTTGAAGAAAAGCTGGATCTCTaGGATGGCTCGGAGCTGCTGCCGGAGCGCTTCCTCCGGACAGCT +
Preference number: 1 (lower is better)
Translates to: LVLPLWDLFEEKLDL*DGSELLPERFLRTA
Trigger: AGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAGGCAGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp CTATCCATCCTGTGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATaGTCGTCAATGGTGTCCAGTCCCGACTCTCTGGAAAGGTTCATG +
Preference number: 1 (lower is better)
Translates to: LSILWAVCAPEAAPG*SSMVSSPDSLERFM
Trigger: CATGAACCTTTCCAGAGAGTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCACAGGATGGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp ATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGCTCATCATCTaGTTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATC +
Preference number: 1 (lower is better)
Translates to: IGGVPPAMTEGELII*FLPGHATFSHVIFI
Trigger: GATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp GGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTaGACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAG +
Preference number: 1 (lower is better)
Translates to: GPTGLVFLLFCLMSV*TGDRSPPEWFPSLK
Trigger: CTTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CCA 90 bp CCCTCCTGCCATGACCGAGGGAGAGCTCATCATCTGATTCCTCCCTaGCCATGCCACTTTCAGTCATGTCATCTTCATCCCATAAGCCAT +
Preference number: 1 (lower is better)
Translates to: PSCHDRGRAHHLIPP*PCHFQSCHLHPISH
Trigger: ATGGCTTATGGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp TGCCATGACCGAGGGAGAGCTCATCATCTGATTCCTCCCTGGCCATaGCACTTTCAGTCATGTCATCTTCATCCCATAAGCCATGGCACT +
Preference number: 1 (lower is better)
Translates to: CHDRGRAHHLIPPWP*HFQSCHLHPISHGT
Trigger: AGTGCCATGGCTTATGGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp TTGAAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATTGTAGCATCTCTCCAGGAAGTGCAC +
Preference number: 1 (lower is better)
Translates to: LKAHLVSSQQLPQWG*SAVYCIVASLQEVH
Trigger: GTGCACTTCCTGGAGAGATGCTACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CCA 90 bp TCTGCTTCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGGGTCAAGCTCAGCATCCTCTCCTTA +
Preference number: 1 (lower is better)
Translates to: SASLSSSSSESFCMS*PSPGSWVKLSILSL
Trigger: TAAGGAGAGGATGCTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 90 bp TGGGTCAAGCTCAGCATCCTCTCCTTACCCTTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCCATCTGTCGCTTCAGCTGGTCCATG +
Preference number: 1 (lower is better)
Translates to: WVKLSILSLPFLYFC*LALMRSICRFSWSM
Trigger: CATGGACCAGCTGAAGCGACAGATGGATCGCATCAAGGCCAGGCAACAGAAATATAAAAAGGGTAAGGAGAGGATGCTGAGCTTGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp AGTGTGTTGAAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTaGGGATGGAGCGCTGTATATTGCATTGTAGCATCTCTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: SVLKAHLVSSQQLPQ*GWSAVYCIVASLQE
Trigger: TTCCTGGAGAGATGCTACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTTCAACACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR TCA 90 bp CTTGGGGGACTGACTTTGTCATTGAAGACCACCAGTTCCAGGGCCTaGGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACC +
Preference number: 1 (lower is better)
Translates to: LGGLTLSLKTTSSRA*EFGLYILFPVRLRT
Trigger: GGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTGGAACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR GCA 90 bp TTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTaGCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGG +
Preference number: 1 (lower is better)
Translates to: LQSILGPTGLVFLLF*LMSVCTGDRSPPEW
Trigger: CCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR TCA 90 bp TCTGGTTTTTGCTGTTCATTGGTCGTCTCTGAGCATCAGGTGGCTTaGAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTT +
Preference number: 1 (lower is better)
Translates to: SGFCCSLVVSEHQVA*RLCHMWALEFRVPF
Trigger: AAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCACCTGATGCTCAGAGACGACCAATGAACAGCAAAAACCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 90 bp ACAGAGAAGCTACTATTGGGGTCCAGGAGTTCGTGTATCATTTTCTaGTTACTGGGTGGGCTGATGGTCCACAAAGAATTTGAGTTTCCT +
Preference number: 1 (lower is better)
Translates to: TEKLLLGSRSSCIIF*LLGGLMVHKEFEFP
Trigger: AGGAAACTCAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAAATGATACACGAACTCCTGGACCCCAATAGTAGCTTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp TATCCTCTTGATGATATTATCTGGTCCATCGGATTTCTTTTTGATTaGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGGA +
Preference number: 1 (lower is better)
Translates to: YPLDDIIWSIGFLFD*FILPVFPFHRTLLG
Trigger: TCCAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAAATCCGATGGACCAGATAATATCATCAAGAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp TTTGTGCACTGCATTTACCAGATTGTTAGCGTGACTGTCATACCCTaGACAGTAAATAGAAGAGTCACACTGGACTCCGACTGGAATCTT +
Preference number: 1 (lower is better)
Translates to: FVHCIYQIVSVTVIP*TVNRRVTLDSDWNL
Trigger: AAGATTCCAGTCGGAGTCCAGTGTGACTCTTCTATTTACTGTTCAGGGTATGACAGTCACGCTAACAATCTGGTAAATGCAGTGCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 90 bp GCACCGGTGTCCCTAGAAAAAGCTTGTATAAATTTGTTAAAGCTCTaGTGGTCCATAACTTTCAACTGGCTTTGTTGGGCACTCATTGTG +
Preference number: 1 (lower is better)
Translates to: APVSLEKACINLLKL*WSITFNWLCWALIV
Trigger: CACAATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGACCAGCAGAGCTTTAACAAATTTATACAAGCTTTTTCTAGGGACACCGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp GCATCGTTCAATTCTCAGAACTGTAGATATATCAATATGCTCCCTTaGAATGGAGTTAAGCCAAGTAGTGAAACTGTCCACTGTTGCCAG +
Preference number: 1 (lower is better)
Translates to: ASFNSQNCRYINMLP*NGVKPSSETVHCCQ
Trigger: CTGGCAACAGTGGACAGTTTCACTACTTGGCTTAACTCCATTTCAAGGGAGCATATTGATATATCTACAGTTCTGAGAATTGAACGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp GACCTCAGAATTGGGCAATATAATATTCAATTCTTCTTCCCTTTCTaGGCCCATAAATTATGCCCTAGAGTCTATAAGCCACGTGTTTGG +
Preference number: 1 (lower is better)
Translates to: DLRIGQYNIQFFFPF*AHKLCPRVYKPRVW
Trigger: CCAAACACGTGGCTTATAGACTCTAGGGCATAATTTATGGGCTCAGAAAGGGAAGAAGAATTGAATATTATATTGCCCAATTCTGAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 90 bp TTTCAGAAAAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTaGATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTA +
Preference number: 1 (lower is better)
Translates to: FQKNLKPPFMKIHSG*IGPYILEQKHCHSL
Trigger: TAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTTTTCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 90 bp GTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATCAATATaGTCCCTTGAAATGGAGTTAAGCCAAGTAGTGAAACTGTCCACT +
Preference number: 1 (lower is better)
Translates to: VSMHRSILRTVDISI*SLEMELSQVVKLST
Trigger: AGTGGACAGTTTCACTACTTGGCTTAACTCCATTTCAAGGGAGCATATTGATATATCTACAGTTCTGAGAATTGAACGATGCATGCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 90 bp GTCATAGAGAACATAACCTTCCTTCTTTTCCACTCCTATGATGTTTaGGGGGTGATACGGTTTATCTTTGTTCACCTCCACATTCTTATT +
Preference number: 1 (lower is better)
Translates to: VIENITFLLFHSYDV*GVIRFIFVHLHILI
Trigger: AATAAGAATGTGGAGGTGAACAAAGATAAACCGTATCACCCCCCAAACATCATAGGAGTGGAAAAGAAGGAAGGTTATGTTCTCTATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp TATCATTTTCTGCTTACTGGGTGGGCTGATGGTCCACAAAGAATTTaGGTTTCCTTCCAGTTCTGCTACTGTTATGTCTTCTTTTTCATA +
Preference number: 1 (lower is better)
Translates to: YHFLLTGWADGPQRI*VSFQFCYCYVFFFI
Trigger: TATGAAAAAGAAGACATAACAGTAGCAGAACTGGAAGGAAACTCAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAAATGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp TTCAAAATTCGATCCACATTTGGAAGCTCTTCAAACATGATGGAGTaGGAAATCCCACTGAAGAATTCACGGACAAATTTCCCAATCACA +
Preference number: 1 (lower is better)
Translates to: FKIRSTFGSSSNMME*EIPLKNSRTNFPIT
Trigger: TGTGATTGGGAAATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACTCCATCATGTTTGAAGAGCTTCCAAATGTGGATCGAATTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 90 bp TCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATCCTTaGACAGAAGCACTGTCATTCGTTATTTTCATTTTGAAGAAAGAA +
Preference number: 1 (lower is better)
Translates to: SIHEDTQWVNWALYP*TEALSFVIFILKKE
Trigger: TTCTTTCTTCAAAATGAAAATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR CAA 90 bp TCGGCACCCATGGCTCCCACATCGTACCCAGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGCGCCGTGCTCCCTGCCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SAPMAPTSYPVASYS*ASLGSGAVLPASSS
Trigger: GGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGGGAGCCATGGGTGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPRSSQP*CRRVGP
Trigger: AGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCG...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCCGGGATGCTCGTCAATaGTGTCCAGTCCCGACTCTC +
Preference number: 2 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPRDARQ*CPVPTL
Trigger: GAGAGTCGGGACTGGACACCATTGACGAGCATCCCG...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 90 bp GCCGTCAGCTCATGGGTCAGGGGAGGTAAGATGCTGGACCCCAGCTaGTCGGTGCGGCTGTCGTCCGGGCTGACTGCCATACGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: AVSSWVRGGKMLDPS*SVRLSSGLTAIRFL
Trigger: CAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 90 bp AGCTTGTCGGTGCGGCTGTCGTCCGGGCTGACTGCCATACGGTTCTaGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGAAG +
Preference number: 2 (lower is better)
Translates to: SLSVRLSSGLTAIRF*PAESSCEPKDRCSK
Trigger: CTTCGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGACAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp AGCTCATGGGTCAGGGGAGGTAAGATGCTGGACCCCAGCTTGTCGGTGCGGCTGCTGACCATGGAAGCATaGTCAACCCAAGGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: SSWVRGGKMLDPSLSVRLLTMEA*STQGRH
Trigger: GTGGCGGCCTTGGGTTGATCATGCTTCCATGGTCAG...CAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGC +
Preference number: 2 (lower is better)
Translates to: VDGLERIGGVPPAMTEGEVVRAD*HTVLAC
Trigger: GCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGAC...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTGATGTCTGCAGCTGCTaGGTGTTTCCCAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SSSGPVAEGISSPTPANTDVCSC*VFPKGP
Trigger: TGGGCCTTTGGGAAACACTCAGCAGCTGCAGACATC...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGATCATCAAGGGTGGACTaGCTTGAGAACAGCATGGTT +
Preference number: 2 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGSSRVD*LENSMV
Trigger: AACCATGCTGTTCTCAAGGCAGTCCACCCTTGATGA...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGTGGGCTCAGGCGCCGTaGTCCCTGCCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQWAQAP*SLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCA...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGCATCCCCGTCCAAGGTaGAGAACTGTGTCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSHPRPR*RTVSAL
Trigger: AAGAGCTGACACAGTTCTCCACCTTGGACGGGGATG...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCTTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCC +
Preference number: 2 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPFLYFC*LALMRS
Trigger: GGATCGCATCAAGGCCAGGCAACAGAAATATAAAAA...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGACATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCC +
Preference number: 2 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRHTVLA*RVVLRA
Trigger: GGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATG...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTGTTTCCAGTCAGGTTaGGAACCCACCACTCACTGT +
Preference number: 2 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCCFQSG*EPTTHC
Trigger: ACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACA...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCATCTCTCCAGGAAGTaGACGGGCCCCACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLHLSRK*TGPTEE
Trigger: TTCCTCTGTGGGGCCCGTGCACTTCCTGGAGAGATG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCCCTCCACCTCCTCGATaGTCTCAGTGGTCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPPPPPR*SQWSPG
Trigger: GCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGG...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGCTTGCTGTAGGAGGGTaGGGCCTCCACATCCCCGTC +
Preference number: 2 (lower is better)
Translates to: IHVSHGAILRVDEVVKELLAVGG*GLHIPV
Trigger: GACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAG...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACAGCAGCTTCCCCAGTaGGGATGGAGCGCTGTATAT +
Preference number: 2 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEQQLPQ*GWSAVY
Trigger: ATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CCA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSICRFS*SMDFFS
Trigger: AGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGAT...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGC +
Preference number: 2 (lower is better)
Translates to: IHVSHGAILRVDEVVKELGVSTA*YTAWAR
Trigger: GCGAGCCCACGCAGTGTACCATGCTGTACTCACGCC...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACAGGTAGGAGCTGTCTaGCCCCTATTGCTGTTGCAT +
Preference number: 2 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEQVGAV*PLLLLH
Trigger: ATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CCA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAAGCTTCAGCTGGTCCATaGACTTCTTCTCTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKASAGP*TSSLPQ
Trigger: TTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGC...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCGTCCTGGCCTTCCCCTaGCTCCTGGGTCAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLVLAFP*LLGQAQ
Trigger: CTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGAC...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAGCCTTGAGAACAGCATaGTTGCTTCAGTGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRALRTA*LLQCSS
Trigger: GCTGCTACACTGAAGCAACCATGCTGTTCTCAAGGC...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCCTAAATCATCAAGGGTaGACTGCCTTGAGAACAGCA +
Preference number: 2 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCLNHQG*TALRTA
Trigger: TGCTGTTCTCAAGGCAGTCCACCCTTGATGATTTAG...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 90 bp AGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTaGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAA +
Preference number: 2 (lower is better)
Translates to: RSHWVGLFTLLPHVC*HRRPQPSRMVPLIE
Trigger: TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR TCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTAATAATCTCCACTCCTaGCCATGGAAGCATGATCAA +
Preference number: 2 (lower is better)
Translates to: SSSGPVAEGISSPTPANTNNLHS*PWKHDQ
Trigger: TTGATCATGCTTCCATGGTCAGGAGTGGAGATTATT...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTTTCAAAATTGATCGATaGAAGAACAGAGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SSSGPVAEGISSPTPANTFKIDR*KNRARS
Trigger: GCTCCTGGCTCTGTTCTTTCATCGATCAATTTTGAA...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp AGCTCATGGGTCAGGGGAGGTAAGATGCTGGACCCCAGCTTGTCGGTGCGGCTGAGAAAGCTTATCTGTTaGTATTTCCGATTTTGCACC +
Preference number: 2 (lower is better)
Translates to: SSWVRGGKMLDPSLSVRLRKLIC*YFRFCT
Trigger: GGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCT...CAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACGTGTCTTTGTCGGAGTaGTGTTTTAGGATCAGTAAT +
Preference number: 2 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDVSLSE*CFRISN
Trigger: ATTACTGATCCTAAAACAGCACTCCGACAAAGACAC...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCGAGCCGAAGGACAGATaGTCGAAGCTCACAGCCTTG +
Preference number: 2 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPEPKDR*SKLTAL
Trigger: CAAGGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTC...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: IHVSHGAILRVDEVVKELSFCMS*PSPGSW
Trigger: CCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACT...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCTGGCCTCGTACTCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 2 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGWPRTP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCA...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAGGAGGGGAGGCTCACTaGCATCCATGCCTAGTGCCT +
Preference number: 2 (lower is better)
Translates to: WLEGCATCGHWNLECLFEGGEAH*HPCLVP
Trigger: AGGCACTAGGCATGGATGCCAGTGAGCCTCCCCTCC...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGACGGGGCCCATAAATaGTTCCTTCACATGATCAAT +
Preference number: 2 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVDGAHK*FLHMIN
Trigger: ATTGATCATGTGAAGGAATCATTTATGGGCCCCGTC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCAGGTAGGAGCTGTCTaGCCCCTATTGCTGTTGCAT +
Preference number: 2 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQQVGAV*PLLLLH
Trigger: ATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGTACAGCATGGTACACTaGGTGGGCTCGCTTGATGCT +
Preference number: 2 (lower is better)
Translates to: IHVSHGAILRVDEVVKELYSMVH*VGSLDA
Trigger: AGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTA...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTCGGAGGAGTCCCTCCTaGCATGACCGAGGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLRRSPS*HDRGRA
Trigger: AGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCG...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGAAGCTGGTCACTGGTaGACCATAACAAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSREAGHW*TITKQV
Trigger: CACCTGCTTTGTTATGGTCCACCAGTGACCAGCTTC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 90 bp CTGGGTCAAGCTCAGCATCCTCTCCTTACCCTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATCCATCTGTCGCTTCAGCTGGTCCAT +
Preference number: 2 (lower is better)
Translates to: LGQAQHPLLTLFIFL*PGLDAIHLSLQLVH
Trigger: ATGGACCAGCTGAAGCGACAGATGGATCGCATCAAGGCCAGGCAACAGAAATATAAAAAGGGTAAGGAGAGGATGCTGAGCTTGACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACAAGGTAGCTTTTACTaGAGAAGGATATCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVQGSFY*RRISAP
Trigger: AGGAGCTGATATCCTTCTGCAGTAAAAGCTACCTTG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTGGAGCGCTGTATATTaGATTGTAGCATCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLWSAVY*IVASLQ
Trigger: CTGGAGAGATGCTACAATGCAATATACAGCGCTCCA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGTTTCTCTGGTCAGCATaGATCGTTCAATTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: VDGLERIGGVPPAMTEGEFLWSA*IVQFSE
Trigger: TTCTGAGAATTGAACGATGCATGCTGACCAGAGAAA...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATT +
Preference number: 2 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQLPQWG*SAVYCI
Trigger: AATGCAATATACAGCGCTCCATCCCCACTGGGGAAG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATT +
Preference number: 2 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLPQWG*SAVYCI
Trigger: AATGCAATATACAGCGCTCCATCCCCACTGGGGAAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CCA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCAGATGCTCTCCCGAGTTaGAACATTGCCCTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: ADEEDISMLSILRSLGRADALPS*NIALLN
Trigger: ATTAAGAAGGGCAATGTTCCAACTCGGGAGAGCATC...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTG +
Preference number: 2 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLSGPLA*VQHGTL
Trigger: CAGTGTACCATGCTGTACTCACGCCAGGGGACCACT...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTTTTTTGAACTTTCTGTaGTGTTGCCTGCTATCATTT +
Preference number: 2 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSFLNFL*CCLLSF
Trigger: AAATGATAGCAGGCAACAGCACAGAAAGTTCAAAAA...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPSSESF*MSWPSP
Trigger: AGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTCGCTTGATGCTAAACTaGCACTGTCAGCTGATGAGG +
Preference number: 2 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFRLMLN*HCQLMR
Trigger: CCTCATCAGCTGACAGTGGCAGTTTAGCATCAAGCG...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAA +
Preference number: 2 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPKLSIL*AVCAPE
Trigger: TTCAGGTGCACAGACAGCCCACAGGATGGATAGTTT...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCCCTCGATGGTCTCAGTaGTCCCCTGGCGTGAGTACA +
Preference number: 2 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGPRWSQ*SPGVST
Trigger: TGTACTCACGCCAGGGGACCACTGAGACCATCGAGG...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTCCACATCGTACCCAGTaGCCTCGTACTCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLPHRTQ*PRTPWP
Trigger: AGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGG...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 90 bp TTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTaGCATTTTCTGAGTGTGTTGAAGGCTCATCTAGTCTCATCACAG +
Preference number: 2 (lower is better)
Translates to: LLLETQVGAVCPLLL*HFLSVLKAHLVSSQ
Trigger: CTGTGATGAGACTAGATGAGCCTTCAACACACTCAGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 90 bp TGGCATCCATGCCTAGTGCCTTACAGAGAAAGGGTCACTGACCCTTaGAATAGAATGATCATCCTTAAATCAGAGTCCAAGGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: WHPCLVPYRERVTDP*NRMIILKSESKVEP
Trigger: GGGCTCCACCTTGGACTCTGATTTAAGGATGATCATTCTATTCAAAGGGTCAGTGACCCTTTCTCTGTAAGGCACTAGGCATGGATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGCATCGGATTTCTTTTTaGTTGGTTCATCCTCCCGGT +
Preference number: 2 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQHRISF*LVHPPG
Trigger: ACCGGGAGGATGAACCAATCAAAAAGAAATCCGATG...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACAAGGTAGCTTTTACTaGAGAAGGATATCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRQGSFY*RRISAP
Trigger: AGGAGCTGATATCCTTCTGCAGTAAAAGCTACCTTG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAACAGTGCCTTAACTTaGAAGGTAGCTTTTACTGCA +
Preference number: 2 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLNSALT*KVAFTA
Trigger: TGCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTGGAGCGCTGTATATTaGATTGTAGCATCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEWSAVY*IVASLQ
Trigger: CTGGAGAGATGCTACAATGCAATATACAGCGCTCCA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAATGCGAGACACTGTTaGCTAAAACATAAAGCAAGT +
Preference number: 2 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLNARHC*LKHKAS
Trigger: ACTTGCTTTATGTTTTAGTCAACAGTGTCTCGCATT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCAAGGTAGCTTTTACTaGAGAAGGATATCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSQGSFY*RRISAP
Trigger: AGGAGCTGATATCCTTCTGCAGTAAAAGCTACCTTG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAATGATTCCTTCACATaGTCAATCAGAATGCGAGAC +
Preference number: 2 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQNDSFT*SIRMRD
Trigger: GTCTCGCATTCTGATTGATCATGTGAAGGAATCATT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCATCTCTCCAGGAAGTaGACGGGCCCCACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: VIKELQSILGPTGLVFLLHLSRK*TGPTEE
Trigger: TTCCTCTGTGGGGCCCGTGCACTTCCTGGAGAGATG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 90 bp GTGAAGAAGACCATTAAAGTAATGCCTTCACATAAGCCGAGAGATTaGCAGGAAAGTGATGTGGACTCTACATCACGTGGTCGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: VKKTIKVMPSHKPRD*QESDVDSTSRGRLG
Trigger: TCCCAAACGACCACGTGATGTAGAGTCCACATCACTTTCCTGCAAATCTCTCGGCTTATGTGAAGGCATTACTTTAATGGTCTTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAATGCGAGACACTGTTaGCTAAAACATAAAGCAAGT +
Preference number: 2 (lower is better)
Translates to: VPLGWSFYSSASCLFAQENARHC*LKHKAS
Trigger: ACTTGCTTTATGTTTTAGTCAACAGTGTCTCGCATT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR TCA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATTCAGAACGTCTGTGCTaGTGTCTCTGGAAGAATTGG +
Preference number: 2 (lower is better)
Translates to: TVGELGLISLNRSTVIRYSERLC*CLWKNW
Trigger: CCAATTCTTCCAGAGACATCAGCACAGACGTTCTGA...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCATGATCAATCAGAATaGGAGACACTGTTGACTAAA +
Preference number: 2 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQHDQSE*ETLLTK
Trigger: TTTAGTCAACAGTGTCTCGCATTCTGATTGATCATG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTGGAGCGCTGTATATTaGATTGTAGCATCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSWSAVY*IVASLQ
Trigger: CTGGAGAGATGCTACAATGCAATATACAGCGCTCCA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGTTCTGTGCTGTTGCCTaGTATCATTTTAGCGATATT +
Preference number: 2 (lower is better)
Translates to: IHVSHGAILRVDEVVKELFCAVA*YHFSDI
Trigger: AATATCGCTAAAATGATAGCAGGCAACAGCACAGAA...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAAATCAGAGTCCAAGGTaGAGCCCAAGCTCATTTTTA +
Preference number: 2 (lower is better)
Translates to: WLEGCATCGHWNLECLFENQSPR*SPSSFL
Trigger: TAAAAATGAGCTTGGGCTCCACCTTGGACTCTGATT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: FLISLVSMHRSILRTVDISVAWP*CDPSVA
Trigger: AGCGACAGATGGATCGCATCAAGGCCAGGCAACAGA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCCACGTAGAATTTCTCTaGCTCTTCAAGCTCATCGTC +
Preference number: 2 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGHVEFL*LFKLIV
Trigger: GACGATGAGCTTGAAGAGTCAGAGAAATTCTACGTG...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR TCA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTTTTAGAGTGCCTTTTTaGAATTGGGGAGGAGGCGTA +
Preference number: 2 (lower is better)
Translates to: FMIRRETHCILCGYQDLLFRVPF*NWGGGV
Trigger: TACGCCTCCTCCCCAATTTCAAAAAGGCACTCTAAA...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAGAAAGGCAACCACAATaGCCGCGGTGGGAATTTACC +
Preference number: 2 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLERQPQ*PRWEFT
Trigger: GGTAAATTCCCACCGCGGTCATTGTGGTTGCCTTTC...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR GCA 90 bp GCACAGTTTACTTGTGACTTGATAGAAATAGGCATTTGTGCACTGCATTTACCAGCTCACTGGCATCCATaGCTAGTGCCTTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: AQFTCDLIEIGICALHLPAHWHP*LVPYRE
Trigger: TTCTCTGTAAGGCACTAGGCATGGATGCCAGTGAGC...TGGTAAATGCAGTGCACAAATGCCTATTTCTATCAAGTCACAAGTAAACTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTATGTCTCTGGAAGAATTaGACCCCGGGCTCAAAGACC +
Preference number: 2 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLCLWKN*TPGSKT
Trigger: GGTCTTTGAGCCCGGGGTCCAATTCTTCCAGAGACA...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATAGGCTGTGCCACATGTaGGCATTGGAATTTAGAGTG +
Preference number: 2 (lower is better)
Translates to: KSEASIHEDTQWVNWALYRLCHM*ALEFRV
Trigger: CACTCTAAATTCCAATGCCCACATGTGGCACAGCCT...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR CAA 90 bp ACCTCAGTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTaGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAC +
Preference number: 2 (lower is better)
Translates to: TSVIKELQSILGPTG*VFLLFCLMSVCTGD
Trigger: GTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAACTGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR TCA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTTTCTTCTTCCCTTTCTaGGCCCATAAATTATGCCCT +
Preference number: 2 (lower is better)
Translates to: FMIRRETHCILCGYQDLLFFFPF*AHKLCP
Trigger: AGGGCATAATTTATGGGCTCAGAAAGGGAAGAAGAA...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGTTCATTGGTCGTCTCTaGGCATCAGGTGGCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLFIGRL*ASGGLK
Trigger: CTTCAAGCCACCTGATGCTCAGAGACGACCAATGAA...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTAACAGTGCCTTAACTTaGAAGGTAGCTTTTACTGCA +
Preference number: 2 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSNSALT*KVAFTA
Trigger: TGCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR GCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGAGGAGGGAAACACACTaGATTCTATGTGGCTATCAG +
Preference number: 2 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLRRETH*ILCGYQ
Trigger: CTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCT...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTCTTCAGTGTAGCAGCTaGAGATACTGTCATGTGAAT +
Preference number: 2 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLLQCSS*RYCHVN
Trigger: ATTCACATGACAGTATCTCCAGCTGCTACACTGAAG...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CCA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTGCCACATGTGGGCATTaGAATTTAGAGTGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: FMIRRETHCILCGYQDLLATCGH*NLECLF
Trigger: AAAAAGGCACTCTAAATTCCAATGCCCACATGTGGC...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATAACCAGTTCCAGGGCCTaGGAGTTCGGATTGTATATT +
Preference number: 2 (lower is better)
Translates to: SRTNFPITRTTEAYNPIITSSRA*EFGLYI
Trigger: AATATACAATCCGAACTCTCAGGCCCTGGAACTGGT...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR-3UTR TCA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATCATAAAATATGTATGTaGATAGGGCTCTCGACCTCA +
Preference number: 2 (lower is better)
Translates to: TVGELGLISLNRSTVIRYHKICM*IGLSTS
Trigger: TGAGGTCGAGAGCCCTATTCACATACATATTTTATG...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGGTGACTGTCATACCCTaGACAGTAAATAGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLVTVIP*TVNRRV
Trigger: GACTCTTCTATTTACTGTTCAGGGTATGACAGTCAC...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCAACCAGATTGTTAGCGTaGCTGTCATACCCTGAACAG +
Preference number: 2 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSTRLLA*LSYPEQ
Trigger: CTGTTCAGGGTATGACAGTCACGCTAACAATCTGGT...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR GCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTTTTGAACTTTCTGTaGTGTTGCCTGCTATCATTT +
Preference number: 2 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLFLNFL*CCLLSF
Trigger: AAATGATAGCAGGCAACAGCACAGAAAGTTCAAAAA...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR-3UTR TCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGGGCGTAGTAAGAAAGTaGGTGCATTTTAAGTTATCC +
Preference number: 2 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLGVVRK*VHFKLS
Trigger: GGATAACTTAAAATGCACTCACTTTCTTACTACGCC...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATCCACCAATATTTATGTaGGCTAGTGGAATTATCACA +
Preference number: 2 (lower is better)
Translates to: TVGELGLISLNRSTVIRYPPIFM*ASGIIT
Trigger: TGTGATAATTCCACTAGCTCACATAAATATTGGTGG...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCATTGAAGCTGGTCACTaGTGGACCATAACAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VIKELQSILGPTGLVFLLIEAGH*WTITKQ
Trigger: CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAAT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGGTTTTTGCTGTTCATTaGTCGTCTCTGAGCATCAGG +
Preference number: 2 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLVFAVH*SSLSIR
Trigger: CCTGATGCTCAGAGACGACCAATGAACAGCAAAAAC...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAACACTGGACTCCGACTaGAATCTTTTGTCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLTLDSD*NLLSLD
Trigger: GTCCAAAGACAAAAGATTCCAGTCGGAGTCCAGTGT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCACCTCATTCATCTTTATaGTCAGGAGGGAAACACACT +
Preference number: 2 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSPHSSL*SGGKHT
Trigger: AGTGTGTTTCCCTCCTGATCATAAAGATGAATGAGG...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGATAGAAGAGTCACACTaGACTCCGACTGGAATCTTT +
Preference number: 2 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLIEESH*TPTGIF
Trigger: AAAGATTCCAGTCGGAGTCCAGTGTGACTCTTCTAT...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR CAA 90 bp AAGGTATTGGAATGGAAGGTATCATTGAACAGCAATAATGCAATCTaGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTATAC +
Preference number: 2 (lower is better)
Translates to: KVLEWKVSLNSNNAI*CVYIGMEVGNLSLY
Trigger: GTATAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATTGCTGTTCAATGATACCTTCCATTCCAATACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAATGATTCCTTCACATaGTCAATCAGAATGCGAGAC +
Preference number: 2 (lower is better)
Translates to: VIKELQSILGPTGLVFLLNDSFT*SIRMRD
Trigger: GTCTCGCATTCTGATTGATCATGTGAAGGAATCATT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR TCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGAGCAAATATAGCCACTaGGTTCCAGAATTCCTCATT +
Preference number: 2 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLSKYSH*VPEFLI
Trigger: AATGAGGAATTCTGGAACTCAGTGGCTATATTTGCT...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR TCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATATTGCTTTATAGGTTTTaGGTTAGAATCACTAGGTGC +
Preference number: 2 (lower is better)
Translates to: SRTNFPITRTTEAYNPIILLYRF*VRITRC
Trigger: GCACCTAGTGATTCTAACTCAAAACCTATAAAGCAA...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCATGATCAATCAGAATaGGAGACACTGTTGACTAAA +
Preference number: 2 (lower is better)
Translates to: VIKELQSILGPTGLVFLLHDQSE*ETLLTK
Trigger: TTTAGTCAACAGTGTCTCGCATTCTGATTGATCATG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 90 bp ACAAGTGAGAATAAGCAAGAACAAACCAAAGTTACAGCATTACATTaGATAGTGAAGAAGACCATTAAAGTAATGCCTTCACATAAGCCG +
Preference number: 2 (lower is better)
Translates to: TSENKQEQTKVTALH*IVKKTIKVMPSHKP
Trigger: CGGCTTATGTGAAGGCATTACTTTAATGGTCTTCTTCACTATCAAATGTAATGCTGTAACTTTGGTTTGTTCTTGCTTATTCTCACTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR GCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTAGAAAGCTTATCTGTTaGTATTTCCGATTTTGCACC +
Preference number: 2 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFRKLIC*YFRFCT
Trigger: GGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCT...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR CCA 72 bp CATCGTACCCAGTGGCCTCGTACTCCTTGGCCTCCCTaGGCTCAGGCGCCGTGCTCCCTGCCTCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: HRTQWPRTPWPP*AQAPCSLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCACTGGGTACGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CGCTGGCCGTCAGCTCATGGGTCAGGGGAGGTAAGATaGTGGACCCCAGCTTGTCGGTGCGGCTGTCGTCCG +
Preference number: 3 (lower is better)
Translates to: RWPSAHGSGEVR*WTPACRCGCRP
Trigger: CGGACGACAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCTGACGGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp TGGCCGTCAGCTCATGGGTCAGGGGAGGTAAGATGCTaGACCCCAGCTTGTCGGTGCGGCTGTCGTCCGGGC +
Preference number: 3 (lower is better)
Translates to: WPSAHGSGEVRC*TPACRCGCRPG
Trigger: GCCCGGACGACAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCTGACGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CCCCAGCTTGTCGGTGCGGCTGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGA +
Preference number: 3 (lower is better)
Translates to: PQLVGAAVVRAD*HTVLACRVVLR
Trigger: TCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGACAAGCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp TGGACCCCAGCTTGTCGGTGCGGCTGTCGTCCGGGCTaGCTGCCATACGGTTCTTGCCTGCAGAGTCGTCCT +
Preference number: 3 (lower is better)
Translates to: WTPACRCGCRPG*LPYGSCLQSRP
Trigger: AGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCACCGACAAGCTGGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp GCGAGCCGAAGGACAGATGCTCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCA +
Preference number: 3 (lower is better)
Translates to: ASRRTDARSSQP*CRRVGPPHPRP
Trigger: TGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CTGCTGCCGGAGCGCTTCCTCCGGACAGCTGTCTGCTaGTCCGGGAAGGTCACATGCACTGACTCCACAGAC +
Preference number: 3 (lower is better)
Translates to: LLPERFLRTAVC*SGKVTCTDSTD
Trigger: GTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp GAGCTGCTGCCGGAGCGCTTCCTCCGGACAGCTGTCTaGTGCTCCGGGAAGGTCACATGCACTGACTCCACA +
Preference number: 3 (lower is better)
Translates to: ELLPERFLRTAV*CSGKVTCTDST
Trigger: TGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp GCTGTCGTCCGGGCTGACTGCCATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTC +
Preference number: 3 (lower is better)
Translates to: AVVRADCHTVLA*RVVLRAEGQML
Trigger: GAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CTCCGGACAGCTGTCTGCTGCTCCGGGAAGGTCACATaGACTGACTCCACAGACGCGGCCAGGTTGATGGAC +
Preference number: 3 (lower is better)
Translates to: LRTAVCCSGKVT*TDSTDAARLMD
Trigger: GTCCATCAACCTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp TCAGCCTCCACCTCCTCGATGGTCTCAGTGGTCCCCTaGCGTGAGTACAGCATGGTACACTGCGTGGGCTCG +
Preference number: 3 (lower is better)
Translates to: SASTSSMVSVVP*REYSMVHCVGS
Trigger: CGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CCTCCTGCTCAGCCTCCACCTCCTCGATGGTCTCAGTaGTCCCCTGGCGTGAGTACAGCATGGTACACTGCG +
Preference number: 3 (lower is better)
Translates to: PPAQPPPPRWSQ*SPGVSTAWYTA
Trigger: CGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGGCTGAGCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp ACGGCCCCGGGACCTGGTCCTCTGACAGTGAAGAGGTaGTGTCTGCAGCTGCTGAGTGTTTCCCAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: TAPGPGPLTVKR*CLQLLSVSQRP
Trigger: GGGCCTTTGGGAAACACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAGAGGACCAGGTCCCGGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp AAGAAAAGCTGGATCTCTGGGATGGCTCGGAGCTGCTaGCGGAGCGCTTCCTCCGGACAGCTGTCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: KKSWISGMARSC*RSASSGQLSAA
Trigger: AGCAGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGTCCACAGGACCCTCCTaGGATCCTTTCCGCCTTCGT +
Preference number: 3 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSSTGPS*DPFRLR
Trigger: ACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGGA...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp GACAGCTGTCTGCTGCTCCGGGAAGGTCACATGCACTaGCTCCACAGACGCGGCCAGGTTGATGGACTTGAG +
Preference number: 3 (lower is better)
Translates to: DSCLLLREGHMH*LHRRGQVDGLE
Trigger: CTCAAGTCCATCAACCTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGAGCAGCAGACAGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CTGTGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATaGTCGTCAATGGTGTCCAGTCCCGACTCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: LWAVCAPEAAPG*SSMVSSPDSLE
Trigger: TTCCAGAGAGTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CTGACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTaGGAGCCGAAGGACAGATGCTCGAAGCTCACAGCC +
Preference number: 3 (lower is better)
Translates to: LTAIRFLPAESS*EPKDRCSKLTA
Trigger: GGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp TTGAAGAAAAGCTGGATCTCTGGGATGGCTCGGAGCTaGTGCCGGAGCGCTTCCTCCGGACAGCTGTCTGCT +
Preference number: 3 (lower is better)
Translates to: LKKSWISGMARS*CRSASSGQLSA
Trigger: AGCAGACAGCTGTCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp GGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATGCTGGACCCCAGCTaGTCGGTGCGGCTGTCGTCC +
Preference number: 3 (lower is better)
Translates to: GYCTWHRRAAEIGAAPRRMLDPS*SVRLSS
Trigger: GGACGACAGCCGCACCGACAAGCTGGGGTCCAGCAT...TCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGC +
Preference number: 3 (lower is better)
Translates to: IHVSHGAILRVDEVVKELVASYS*ASLGSG
Trigger: GCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCAC...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CGATGGTCTCAGTGGTCCCCTGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGCTTGATGCTAAACTGC +
Preference number: 3 (lower is better)
Translates to: RWSQWSPGVSTA*YTAWARLMLNC
Trigger: GCAGTTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCCTCTTCAGAGAGTTTTaGCATGTCCTGGCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCLFREF*HVLAFP
Trigger: GGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp GTCCCTCCTGCCATGACCGAGGGAGAGCTCATCATCTaGTTCCTCCCTGGCCATGCCACTTTCAGTCATGTC +
Preference number: 3 (lower is better)
Translates to: VPPAMTEGELII*FLPGHATFSHV
Trigger: GACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCAGGAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp TCAGTGGTCCCCTGGCGTGAGTACAGCATGGTACACTaGGTGGGCTCGCTTGATGCTAAACTGCCACTGTCA +
Preference number: 3 (lower is better)
Translates to: SVVPWREYSMVH*VGSLDAKLPLS
Trigger: TGACAGTGGCAGTTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp ATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATaGCCGAGGGAGAGCTCATCATCTGATTCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: MDLRESEESLLP*PRESSSSDSSL
Trigger: CAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTaGCTCCTGGGTCAAGCTCAGCATCCTCTCCTTACC +
Preference number: 3 (lower is better)
Translates to: LFREFLHVLAFP*LLGQAQHPLLT
Trigger: GGTAAGGAGAGGATGCTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CCTCCCAGGGTAATTGTGACGGAGACGTCCAGGGGCTaGTTGATGACCCCAGCCACAGATTTGATCAAAGAC +
Preference number: 3 (lower is better)
Translates to: PPRVIVTETSRG*LMTPATDLIKD
Trigger: GTCTTTGATCAAATCTGTGGCTGGGGTCATCAACCAGCCCCTGGACGTCTCCGTCACAATTACCCTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCACTGCGTGGGCTCGCTaGATGCTAAACTGCCACTGT +
Preference number: 3 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEITAWAR*MLNCHC
Trigger: ACAGTGGCAGTTTAGCATCAAGCGAGCCCACGCAGT...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACTTTCTCTTTGTGTCTTaGTCGGAGTGCTGTTTTAGG +
Preference number: 3 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDFLFVS*SECCFR
Trigger: CCTAAAACAGCACTCCGACAAAGACACAAAGAGAAA...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp GTTTCGGGTGCTTGTGCTGCCTCTTTGGGATCTGTTTaGAGAAAAGCTGGATCTCTGGGATGGCTCGGAGCT +
Preference number: 3 (lower is better)
Translates to: VSGACAASLGSV*RKAGSLGWLGA
Trigger: AGCTCCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAGGCAGCACAAGCACCCGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp TGCCTGGCCTTGATGCGATCCATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCTTCCTCAATTCTTGCC +
Preference number: 3 (lower is better)
Translates to: CLALMRSICRFS*SMDFFSSSILA
Trigger: GGCAAGAATTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGATGGATCGCATCAAGGCCAGGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGGGTCAAGCTCAGCATC +
Preference number: 3 (lower is better)
Translates to: LSSSSSESFCMS*PSPGSWVKLSI
Trigger: GATGCTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CATGACCGAGGGAGAGCTCATCATCTGATTCCTCCCTaGCCATGCCACTTTCAGTCATGTCATCTTCATCCC +
Preference number: 3 (lower is better)
Translates to: HDRGRAHHLIPP*PCHFQSCHLHP
Trigger: GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAAGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 3 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCCTTGGGGGACTGACTTaGTCATTGAAGACCACCAGT +
Preference number: 3 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEILGGLT*SLKTTS
Trigger: ACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTTCTGTTGCCTGGCCTaGATGCGATCCATCTGTCGC +
Preference number: 3 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPFCCLA*MRSICR
Trigger: GCGACAGATGGATCGCATCAAGGCCAGGCAACAGAA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGTCCCGAGTTGGAACATaGCCCTTCTTAATTTCTCTG +
Preference number: 3 (lower is better)
Translates to: VDGLERIGGVPPAMTEGESRVGT*PFLISL
Trigger: CAGAGAAATTAAGAAGGGCAATGTTCCAACTCGGGA...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGCTGTTTCCAGTCAGGTaGAGAACCCACCACTCACTG +
Preference number: 3 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQLFPVR*RTHHSL
Trigger: CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAG...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp ATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTaGCTCATGTCTGTTTGCACAGGAGACCGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: ILGPTGLVFLLF*LMSVCTGDRSP
Trigger: AGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR GCA 72 bp TCTGCTTCTCTTTCATCATCCTCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCTGGCTCCTGGGTCAAG +
Preference number: 3 (lower is better)
Translates to: SASLSSSSSESF*MSWPSPGSWVK
Trigger: CTTGACCCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATTGTAGCATCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: HLVSSQQLPQWG*SAVYCIVASLQ
Trigger: CTGGAGAGATGCTACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CCA 72 bp GAGATACTGTCATGTGAATCTAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGC +
Preference number: 3 (lower is better)
Translates to: EILSCESKLSIL*AVCAPEAAPGC
Trigger: GCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCACAGGATGGATAGTTTAGATTCACATGACAGTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGGATATCAGCTCCTTTaGTCTACCTATCAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVGYQLL*STYQKR
Trigger: TCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACAACAGTGCCTTAACTaGCAAGGTAGCTTTTACTGC +
Preference number: 3 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEQQCLN*QGSFYC
Trigger: GCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTTG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCAACAGTGCCTTAACTaGCAAGGTAGCTTTTACTGC +
Preference number: 3 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLQQCLN*QGSFYC
Trigger: GCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAATGGAGCGCTGTATATaGCATTGTAGCATCTCTCCA +
Preference number: 3 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEMERCI*HCSISP
Trigger: TGGAGAGATGCTACAATGCAATATACAGCGCTCCAT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCTGGTCACTGGTGTTTTaGAACTTTCTGTGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEIWSLVF*NFLCCC
Trigger: GCAACAGCACAGAAAGTTCAAAAACACCAGTGACCA...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp TGCTGTTCATTGGTCGTCTCTGAGCATCAGGTGGCTTaGAGGCTGTGCCACATGTGGGCATTGGAATTTAGA +
Preference number: 3 (lower is better)
Translates to: CCSLVVSEHQVA*RLCHMWALEFR
Trigger: TCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCACCTGATGCTCAGAGACGACCAATGAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACAACAGTGCCTTAACTaGCAAGGTAGCTTTTACTGC +
Preference number: 3 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVQQCLN*QGSFYC
Trigger: GCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTTG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR TCA 72 bp TCTCCTTACCCTTTTTATATTTCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCTTCAGCTGGTCCATGG +
Preference number: 3 (lower is better)
Translates to: SPYPFYISVAWP*CDPSVASAGPW
Trigger: CCATGGACCAGCTGAAGCGACAGATGGATCGCATCAAGGCCAGGCAACAGAAATATAAAAAGGGTAAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CTCAGCATCCTCTCCTTACCCTTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCCATCTGTCGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: LSILSLPFLYFC*LALMRSICRFS
Trigger: GCTGAAGCGACAGATGGATCGCATCAAGGCCAGGCAACAGAAATATAAAAAGGGTAAGGAGAGGATGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp ATCAGGTGGCTTGAAGGCTGTGCCACATGTGGGCATTaGAATTTAGAGTGCCTTTTTGAAATTGGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: IRWLEGCATCGH*NLECLFEIGEE
Trigger: CTCCTCCCCAATTTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCACCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGGATATCAGCTCCTTTaGTCTACCTATCAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVGYQLL*STYQKR
Trigger: TCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATTAGTTCCCTCTCTTTaGCTCCTAGAAACACAGGTA +
Preference number: 3 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLVPSL*LLETQV
Trigger: TACCTGTGTTTCTAGGAGCAAAAGAGAGGGAACTAA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCTGCCTCATGTCTGTTaGCACAGGAGACCGCAGCCC +
Preference number: 3 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLPHVC*HRRPQP
Trigger: GGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATATGTCTCTGGAAGAATaGGACCCCGGGCTCAAAGAC +
Preference number: 3 (lower is better)
Translates to: TVGELGLISLNRSTVIRYMSLEE*DPGLKD
Trigger: GTCTTTGAGCCCGGGGTCCAATTCTTCCAGAGACAT...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 72 bp CAGCAGAAATCGGGGCTGCCCCACGTAGAATTTCTCTaGCTCTTCAAGCTCATCGTCGTGAAACATCTTTTT +
Preference number: 3 (lower is better)
Translates to: QQKSGLPHVEFL*LFKLIVVKHLF
Trigger: AAAAAGATGTTTCACGACGATGAGCTTGAAGAGTCAGAGAAATTCTACGTGGGGCAGCCCCGATTTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR TCA 72 bp ATAGTTTTCTGGTTTTTGCTGTTCATTGGTCGTCTCTaGGCATCAGGTGGCTTGAAGGCTGTGCCACATGTG +
Preference number: 3 (lower is better)
Translates to: IVFWFLLFIGRL*ASGGLKAVPHV
Trigger: CACATGTGGCACAGCCTTCAAGCCACCTGATGCTCAGAGACGACCAATGAACAGCAAAAACCAGAAAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 3 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR-3UTR CAA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCTGGTCACTGGTGTTTTaGAACTTTCTGTGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLWSLVF*NFLCCC
Trigger: GCAACAGCACAGAAAGTTCAAAAACACCAGTGACCA...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR TCA 72 bp TCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATaGTTCCTTCACATGATCAATCAGAATGCGAGACAC +
Preference number: 3 (lower is better)
Translates to: SSSVSLRDGAHK*FLHMINQNARH
Trigger: GTGTCTCGCATTCTGATTGATCATGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR TCA 72 bp CTGCTTACTGGGTGGGCTGATGGTCCACAAAGAATTTaGGTTTCCTTCCAGTTCTGCTACTGTTATGTCTTC +
Preference number: 3 (lower is better)
Translates to: LLTGWADGPQRI*VSFQFCYCYVF
Trigger: GAAGACATAACAGTAGCAGAACTGGAAGGAAACTCAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR GCA 72 bp CTACTATTGGGGTCCAGGAGTTCGTGTATCATTTTCTaGTTACTGGGTGGGCTGATGGTCCACAAAGAATTT +
Preference number: 3 (lower is better)
Translates to: LLLGSRSSCIIF*LLGGLMVHKEF
Trigger: AAATTCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAAATGATACACGAACTCCTGGACCCCAATAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTaGACCATAACAAAGCAGGTGTACACATCATTTGTT +
Preference number: 3 (lower is better)
Translates to: SRMVPLIEAGHW*TITKQVYTSFV
Trigger: AACAAATGATGTGTACACCTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CCA 72 bp GATGATATTATCTGGTCCATCGGATTTCTTTTTGATTaGTTCATCCTCCCGGTCTTCCCATTCCACAGGACC +
Preference number: 3 (lower is better)
Translates to: DDIIWSIGFLFD*FILPVFPFHRT
Trigger: GGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAAATCCGATGGACCAGATAATATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp CTTCACATAAGCCGAGAGATTTGCAGGAAAGTGATGTaGACTCTACATCACGTGGTCGTTTGGGAAAACACA +
Preference number: 3 (lower is better)
Translates to: LHISREICRKVM*TLHHVVVWENT
Trigger: TGTGTTTTCCCAAACGACCACGTGATGTAGAGTCCACATCACTTTCCTGCAAATCTCTCGGCTTATGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 3 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCCTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATC +
Preference number: 3 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLLFIFL*PGLDAI
Trigger: GATCGCATCAAGGCCAGGCAACAGAAATATAAAAAG...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR-3UTR CAA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTAGTGCCTTTTTGAAATaGGGGAGGAGGCGTAGTAAG +
Preference number: 3 (lower is better)
Translates to: FMIRRETHCILCGYQDLLSAFLK*GRRRSK
Trigger: CTTACTACGCCTCCTCCCCAATTTCAAAAAGGCACT...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 72 bp TGCATTTACCAGATTGTTAGCGTGACTGTCATACCCTaGACAGTAAATAGAAGAGTCACACTGGACTCCGAC +
Preference number: 3 (lower is better)
Translates to: CIYQIVSVTVIP*TVNRRVTLDSD
Trigger: GTCGGAGTCCAGTGTGACTCTTCTATTTACTGTTCAGGGTATGACAGTCACGCTAACAATCTGGTAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 72 bp GGCCCAGAGTACTGGGTCCAGGCCTTGGGAAATAAATaGAATACAACACAAGTGAGAATAAGCAAGAACAAA +
Preference number: 3 (lower is better)
Translates to: GPEYWVQALGNK*NTTQVRISKNK
Trigger: TTTGTTCTTGCTTATTCTCACTTGTGTTGTATTGCATTTATTTCCCAAGGCCTGGACCCAGTACTCTGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTAGTTCCCTCTCTTTaGCTCCTAGAAACACAGGTA +
Preference number: 3 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLVPSL*LLETQV
Trigger: TACCTGTGTTTCTAGGAGCAAAAGAGAGGGAACTAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGAATGGTTCCCCTCATaGAAGCTGGTCACTGGTGGA +
Preference number: 3 (lower is better)
Translates to: VIKELQSILGPTGLVFLLEWFPS*KLVTGG
Trigger: TCCACCAGTGACCAGCTTCAATGAGGGGAACCATTC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGGGTTTTTGCTGTTCATaGGTCGTCTCTGAGCATCAG +
Preference number: 3 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLGFCCS*VVSEHQ
Trigger: CTGATGCTCAGAGACGACCAATGAACAGCAAAAACC...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 72 bp AATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTaGATTGGGCCTTATATCCTTGAACAGAAGCACTGT +
Preference number: 3 (lower is better)
Translates to: NLKPPFMKIHSG*IGPYILEQKHC
Trigger: ACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 72 bp GTCTACCAGAGAAAAGAGGCCCAACATATACATTTCTaGTGCTACAAGCAATGTCCCATCATCGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: VYQRKEAQHIHF*CYKQCPIIAGK
Trigger: TTTTCCTGCGATGATGGGACATTGCTTGTAGCATCAGAAATGTATATGTTGGGCCTCTTTTCTCTGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR CCA 72 bp CATAAATTATGCCCTAGAGTCTATAAGCCACGTGTTTaGCTTTCTACAGCCAGCACAAGAATGTCAGAACGT +
Preference number: 3 (lower is better)
Translates to: HKLCPRVYKPRV*LSTASTRMSER
Trigger: ACGTTCTGACATTCTTGTGCTGGCTGTAGAAAGCCAAACACGTGGCTTATAGACTCTAGGGCATAATTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGTGCCACATGTGGGCATaGGAATTTAGAGTGCCTTTT +
Preference number: 3 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLCHMWA*EFRVPF
Trigger: AAAAGGCACTCTAAATTCCAATGCCCACATGTGGCA...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 72 bp CGATCCACATTTGGAAGCTCTTCAAACATGATGGAGTaGGAAATCCCACTGAAGAATTCACGGACAAATTTC +
Preference number: 3 (lower is better)
Translates to: RSTFGSSSNMME*EIPLKNSRTNF
Trigger: GAAATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACTCCATCATGTTTGAAGAGCTTCCAAATGTGGATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CCA 72 bp ATTTTCATTTTGAAGAAAGAACCAGGCCCAGAGTACTaGGTCCAGGCCTTGGGAAATAAATGCAATACAACA +
Preference number: 3 (lower is better)
Translates to: IFILKKEPGPEY*VQALGNKCNTT
Trigger: TGTTGTATTGCATTTATTTCCCAAGGCCTGGACCCAGTACTCTGGGCCTGGTTCTTTCTTCAAAATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGTTAGAAAATTATGTCTaGGGAGAGAGAGGCCAACGT +
Preference number: 3 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLLENYV*GERGQR
Trigger: ACGTTGGCCTCTCTCTCCCAAGACATAATTTTCTAA...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCATGGAGCGCTGTATATaGCATTGTAGCATCTCTCCA +
Preference number: 3 (lower is better)
Translates to: VIKELQSILGPTGLVFLLMERCI*HCSISP
Trigger: TGGAGAGATGCTACAATGCAATATACAGCGCTCCAT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATCTCTCGACCTCAGAATaGGGCAATATAATATTCAAT +
Preference number: 3 (lower is better)
Translates to: TVGELGLISLNRSTVIRYLSTSE*GNIIFN
Trigger: ATTGAATATTATATTGCCCAATTCTGAGGTCGAGAG...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATCAAGCAGTGGTAACATaGATTTTACCATTAGAAACC +
Preference number: 3 (lower is better)
Translates to: TVGELGLISLNRSTVIRYQAVVT*ILPLET
Trigger: GGTTTCTAATGGTAAAATCAATGTTACCACTGCTTG...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 72 bp TTTCAACAGTGCCTTAACTTGCAAGGTAGCTTTTACTaGAGAAGGATATCAGCTCCTTTTGTCTACCTATCA +
Preference number: 3 (lower is better)
Translates to: FQQCLNLQGSFY*RRISAPFVYLS
Trigger: TGATAGGTAGACAAAAGGAGCTGATATCCTTCTGCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR-3UTR CAA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAAGGGTCACTGACCCTTaGAATAGAATGATCATCCTT +
Preference number: 3 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLRVTDP*NRMIIL
Trigger: AAGGATGATCATTCTATTCAAAGGGTCAGTGACCCT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGCTAAGAAATAGCTGTTaGAAAGCCCAGTTACTCAAA +
Preference number: 3 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLLRNSC*KAQLLK
Trigger: TTTGAGTAACTGGGCTTTCAAACAGCTATTTCTTAG...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR TCA 72 bp GAAGATACACAGTGGGTGAATTGGGCCTTATATCCTTaGACAGAAGCACTGTCATTCGTTATTTTCATTTTG +
Preference number: 3 (lower is better)
Translates to: EDTQWVNWALYP*TEALSFVIFIL
Trigger: CAAAATGAAAATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGTGTATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 72 bp TCCTCATTCATCTTTATGATCAGGAGGGAAACACACTaGATTCTATGTGGCTATCAGGATCTGCTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: SSFIFMIRRETH*ILCGYQDLLLK
Trigger: TTTTAAAAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAAGATGAATGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAATAGTTTTCTGGTTTTaGCTGTTCATTGGTCGTCTC +
Preference number: 3 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLIVFWF*LFIGRL
Trigger: GAGACGACCAATGAACAGCAAAAACCAGAAAACTAT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAGATAGAAATAGGCATTaGTGCACTGCATTTACCAGA +
Preference number: 3 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLDRNRH*CTAFTR
Trigger: TCTGGTAAATGCAGTGCACAAATGCCTATTTCTATC...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATAAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 3 (lower is better)
Translates to: SRTNFPITRTTEAYNPIIKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
3UTR-3UTR CAA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGGATTCACTCCTACAATaGTGTGATGTTATTTGTCTC +
Preference number: 3 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLDSLLQ*CDVICL
Trigger: GAGACAAATAACATCACACAATTGTAGGAGTGAATC...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR-3UTR CAA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCATTTTATCCTCAGAACTaGGCCTTCTGTTTCAGATAT +
Preference number: 3 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSFYPQN*AFCFRY
Trigger: ATATCTGAAACAGAAGGCCAAGTTCTGAGGATAAAA...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR GCA 72 bp TGTAAGATAGTTATCACAGACCATATCCAATTCCTTTaGAAATGCGATTTTTACATGAGGAAAGGAAAGGCA +
Preference number: 3 (lower is better)
Translates to: CKIVITDHIQFL*KCDFYMRKGKA
Trigger: TGCCTTTCCTTTCCTCATGTAAAAATCGCATTTGCAAAGGAATTGGATATGGTCTGTGATAACTATCTTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR CAA 72 bp ATGGCTCCCACATCGTACCCAGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGCGCCGTGCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: MAPTSYPVASYS*ASLGSGAVLPA
Trigger: GGCAGGGAGCACGGCGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGGGAGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCAGTAGAGGTCGGCTTTaGCAGGGCCGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPSRGRL*QGRSPW
Trigger: CCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACT...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGACAGGGCCGTTCTCCATaGGCAGGCTTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGQGRSP*AGLGGW
Trigger: CCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTG...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAGTCCTGGCCTTCCCCTaGCTCCTGGGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGVLAFP*LLGQAQ
Trigger: CTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGAC...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 72 bp GTGCGGCTGTCGTCCGGGCTGACTGCCATACGGTTCTaGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: VRLSSGLTAIRF*PAESSCEPKDR
Trigger: TCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPSDASW*GPGGFL
Trigger: AAGGAAGCCTCCCGGACCTCACCATGATGCATCTGA...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCCAGGGTTATGTTGGCTaGAGGAGGCCGCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPQGYVG*RRPHQG
Trigger: ACCTTGATGCGGCCTCCTTCAGCCAACATAACCCTG...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACATAGGGTTGGCGTGGTaGTACCACGACAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDIGLAW*YHDRSG
Trigger: CCCGGACCTGTCGTGGTACCACCACGCCAACCCTAT...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTCCTCCACCTCCTCGATaGTCTCAGTGGTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTPPPPR*SQWSPG
Trigger: GCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGG...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCTCCTCGGCACCCATaGCTCCCACATCGTACCCAG +
Preference number: 4 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSPPRHP*LPHRTQ
Trigger: CTGGGTACGATGTGGGAGCCATGGGTGCCGAGGAGG...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACCGGCGGCTGGGCCTaGGGACGGACAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTGGWA*GRTTWP
Trigger: GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCAACCGGCGGCTGGGCCTaGGGACGGACAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: ADEEDISMLSILRSLGRATGGWA*GRTTWP
Trigger: GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGT...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAAAGGGTGGACTGCCTTaGGAACAGCATGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGKGGLP*EQHGCF
Trigger: GAAGCAACCATGCTGTTCTCAAGGCAGTCCACCCTT...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCAGTGCAGGTGTAAAATaGACACCAGCAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPSAGVK*TPAERR
Trigger: CCTCCTTTCTGCTGGTGTGCATTTTACACCTGCACT...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAGGCGCCGTGCTCCCTaGCTCCTCCTCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLRRRAP*LLLLLS
Trigger: GCTGAGCAGGAGGAGGAGGCAGGGAGCACGGCGCCT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAATGGCTCGGAGCTGCTaGCGGAGCGCTTCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVMARSC*RSASSG
Trigger: TCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCAT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGGGACGCAAGGCCCATaGCCGTCTATGGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVGTQGP*PSMASR
Trigger: GCGAGAGGCCATAGACGGGCATGGGCCTTGCGTCCC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGTGCGCGGGCGGCGCTaGGAGTCCCTCCCTCACTCG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSVRGRR*ESLPHS
Trigger: CGAGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCAC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGCCTTGTGGGTCCGGTaGGCGGGCGGCGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQALWVR*AGGAAS
Trigger: ACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGACCGGGGTGGGAGCTaGCAGGCGCGCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLDRGGS*QARRTI
Trigger: GATGGTTCTGCGCGCCTGGCAGCTCCCACCCCGGTC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCCACCGCGTCTCCTTTaGCCGGCCTCGTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCPPRLL*PASSPL
Trigger: CAGCGGAGACGAGGCCGGGCAAAGGAGACGCGGTGG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCGVSTA*YTAWAR
Trigger: GCGAGCCCACGCAGTGTACCATGCTGTACTCACGCC...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAACTTGCTGTAGGAGGGTaGGGCCTCCACATCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKLAVGG*GLHIPV
Trigger: GACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAG...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCCAGGACTCGCGTTaGGTAGCCACAACGGATCTG +
Preference number: 4 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSPQDSR*VATTDL
Trigger: CAGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGG...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCCGGAGAGACCGGGGTaGGAGCTGCCAGGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEPERPG*ELPGAQ
Trigger: CTGCGCGCCTGGCAGCTCCCACCCCGGTCTCTCCGG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCGGAGAGCTCATCATCTaGTTCCTCCCTGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCGELII*FLPGHA
Trigger: GGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCC...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACTGCACAAGGGGCTCTTaGAGCCAGATGCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDCTRGS*SQMRIR
Trigger: TCTGATCCGCATCTGGCTGCAAGAGCCCCTTGTGCA...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAGGCGCCGTGCTCCCTaGCTCCTCCTCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRRRRAP*LLLLLS
Trigger: GCTGAGCAGGAGGAGGAGGCAGGGAGCACGGCGCCT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACGGAGGAGTCCCTCCTaGCATGACCGAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVRRSPS*HDRGRA
Trigger: AGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTTCCGGGAAGGTCACATaGACTGACTCCACAGACGCG +
Preference number: 4 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSSGKVT*TDSTDA
Trigger: CGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGA...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTCCGGCTTCTCCAGGCTaGCAGTCAGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTPASPG*QSDASW
Trigger: CCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGG...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTGGCCTCGTACTCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLWPRTP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACTTGCTGTAGGAGGGTaGGGCCTCCACATCCCCGTC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVLAVGG*GLHIPV
Trigger: GACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGCCCATGCCCGTCTATaGCCTCTCGCCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSAHARL*PLAAGS
Trigger: GCTGCCGGCGGCGAGAGGCCATAGACGGGCATGGGC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCCCTCACCAGGCTCTTaGCGGCCACCTAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEPSPGS*RPPSPA
Trigger: CGCCGGGCTAGGTGGCCGCCAAGAGCCTGGTGAGGG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCAATAATCTCCACTCCTaGCCATGGAAGCATGATCAA +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPNNLHS*PWKHDQ
Trigger: TTGATCATGCTTCCATGGTCAGGAGTGGAGATTATT...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGAGTCCCTCCTGCCATaGCCGAGGGAGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVESLLP*PRESSS
Trigger: TGATGAGCTCTCCCTCGGTCATGGCAGGAGGGACTC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTGGGCTCAGGCGCCGTaGTCCCTGCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSWAQAP*SLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGTGGGCTCAGGCGCCGTaGTCCCTGCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLWAQAP*SLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCA...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACCTGCAGAGTCGTCCTaGGAGCCGAAGGACAGATGC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVPAESS*EPKDRC
Trigger: GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGCTGCCATACGGTTCTTaGCTGCAGAGTCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGELPYGS*LQSRPA
Trigger: CGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAG...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVVVRAD*HTVLAC
Trigger: GCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGAC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCGGAGGAGTCCCTCCTaGCATGACCGAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLRRSPS*HDRGRA
Trigger: AGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGGGATGGCTCGGAGCTaGTGCCGGAGCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEGMARS*CRSASS
Trigger: GGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGATGCTTCCTTTTTGACTaGTGTTTCGGGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGCFLFD*CFGCLC
Trigger: GCACAAGCACCCGAAACAGCAGTCAAAAAGGAAGCA...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCATTTTGCCACAGGCCTaGGAAGTTCTCAAACTGATA +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPILPQA*EVLKLI
Trigger: TATCAGTTTGAGAACTTCCCAGGCCTGTGGCAAAAT...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGTCCTGGCCTTCCCCTaGCTCCTGGGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCVLAFP*LLGQAQ
Trigger: CTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGAC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACCTCCACCTCCTCGATaGTCTCAGTGGTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEPPPPR*SQWSPG
Trigger: GCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGAGACGTCCAGGGGCTaGTTGATGACCCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVETSRG*LMTPAT
Trigger: TGTGGCTGGGGTCATCAACCAGCCCCTGGACGTCTC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTGATGCCGGGGCCTTaGAGAGGGACGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLMPGP*RGTLWE
Trigger: CTCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTCGCCCACCGGGCTCTaGGTAGCCCCTCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESPTGL*VAPHQA
Trigger: AGCCTGGTGAGGGGCTACCCAGAGCCCGGTGGGCGA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACTGTGCAGGCCAGGCTaGAAGCCTGGATCAACCAAC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVLCRPG*KPGSTN
Trigger: GTTGGTTGATCCAGGCTTTCAGCCTGGCCTGCACAG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGGCTGTCTGTGCACCTaGAGCAGCTCCGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVGCLCT*SSSGML
Trigger: GAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSGPLA*VQHGTL
Trigger: CAGTGTACCATGCTGTACTCACGCCAGGGGACCACT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRSGPLA*VQHGTL
Trigger: CAGTGTACCATGCTGTACTCACGCCAGGGGACCACT...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGGCTGTCGTCCGGGCTaGCTGCCATACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRGCRPG*LPYGSC
Trigger: GCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGATGGGAAGCAGGAGCGTaGTCATGGAGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRWEAGA*SWRQRP
Trigger: TGGTCTCTGCCTCCATGATCACGCTCCTGCTTCCCA...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATGGGAAGCAGGAGCGTaGTCATGGAGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVWEAGA*SWRQRP
Trigger: TGGTCTCTGCCTCCATGATCACGCTCCTGCTTCCCA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCATTGGAAGAAATACTTaGCTACAATTGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPIGRNT*LQLPPQ
Trigger: CTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAAT...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCGAAGGTCACATGCACTaGCTCCACAGACGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEIEGHMH*LHRRGQ
Trigger: CTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTC...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACCAGTACAGTCTTCCTaGGGTAGAGGGCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVPVQSS*GRGLGP
Trigger: TGGACCGAGCCCTCTACCTCAGGAAGACTGTACTGG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACCCGCACACCACTTCTaGGGCCATCGCGTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTPAHHF*GHRVGP
Trigger: CGGACCGACGCGATGGCCTCAGAAGTGGTGTGCGGG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTCTGGCCCCGTGGCTaGGGGTATCTCTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLFWPRG*GYLFSD
Trigger: GTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGGGTAATCCACGGGGTTaGCGTTCACAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGEGNPRG*RSQSPA
Trigger: TGCTGGTGACTGTGAACGGCAACCCCGTGGATTACC...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACGTCCCAAATGATTCCTaGTTCCCCACTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDVPNDS*FPTGKC
Trigger: ACACTTCCCAGTGGGGAAGCAGGAATCATTTGGGAC...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGGAAGCAGCTCCGGGATaGTCGTCAATGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGEEAAPG*SSMVSS
Trigger: ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTC...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGGGCTCAGGCGCCGTaGTCCCTGCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTWAQAP*SLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVHTVLA*RVVLRA
Trigger: GGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AGCTCATGGGTCAGGGGAGGTAAGATGCTGGACCCCAGCTTGTCGGTGCGGCTGATTCCTCCCTGGCCATaGCACTTTCAGTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: SSWVRGGKMLDPSLSVRLIPPWP*HFQSCH
Trigger: ATGACATGACTGAAAGTGGCATGGCCAGGGAGGAAT...CAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCCGGGAAGGTCACATaGACTGACTCCACAGACGCG +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSGKVT*TDSTDA
Trigger: CGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACGGACAGCTGTCTGCTaGTCCGGGAAGGTCACATGC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIERTAVC*SGKVTC
Trigger: GCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCCTCCGGACAGCTGTCTaGTGCTCCGGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEILRTAV*CSGKVT
Trigger: TGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAG...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGATGGCTCGGAGCTGCTaGCGGAGCGCTTCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQMARSC*RSASSG
Trigger: TCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCAT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGATGGCTCGGAGCTGCTaGCGGAGCGCTTCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLMARSC*RSASSG
Trigger: TCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCAT...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAGGGATGGCTCGGAGCTaGTGCCGGAGCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPGMARS*CRSASS
Trigger: GGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCC...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACATCTCTCCAGGAAGTaGACGGGCCCCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVHLSRK*TGPTEE
Trigger: TTCCTCTGTGGGGCCCGTGCACTTCCTGGAGAGATG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTACAGCATGGTACACTaGGTGGGCTCGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCYSMVH*VGSLDA
Trigger: AGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTA...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCATAGTAGTCATTGGGTaGAACTGCCTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPIVVIG*NCLLKE
Trigger: TTCTTTCAAGAGGCAGTTCCACCCAATGACTACTAT...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAATAGGGTTGGCGTGGTaGTACCACGACAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEIGLAW*YHDRSG
Trigger: CCCGGACCTGTCGTGGTACCACCACGCCAACCCTAT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAGGATAGGGTTGGCGTaGTGGTACCACGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVRIGLA*WYHDRS
Trigger: GGACCTGTCGTGGTACCACCACGCCAACCCTATCCT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACAGGGCCGTTCTCCATaGGCAGGCTTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVQGRSP*AGLGGW
Trigger: CCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLGVSTA*YTAWAR
Trigger: GCGAGCCCACGCAGTGTACCATGCTGTACTCACGCC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTGGCCTCGTACTCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEWPRTP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCCAGAACCGGCGGCTaGGCCTGGGGACGGACAACA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSRTGG*AWGRTT
Trigger: TGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCCCTCAGTATAGACGATaGCCATCATCCAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCPQYRR*PSSRTG
Trigger: GCCGGTTCTGGATGATGGCCATCGTCTATACTGAGG...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCCCCAGGACTCGCGTTaGGTAGCCACAACGGATCTG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLPQDSR*VATTDL
Trigger: CAGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGCTGTGCTCCCGCCTaGCTCCCGGGGCGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTCCAPA*LPGRRL
Trigger: CAAACGACGCCCCGGGAGCCAGGCGGGAGCACAGCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
3UTR CAA 72 bp ACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATaGCATTGTAGCATCTCTCCAGGAAGTGCACGGGCC +
Preference number: 4 (lower is better)
Translates to: TAASPVGMERCI*HCSISPGSARA
Trigger: GGCCCGTGCACTTCCTGGAGAGATGCTACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 72 bp AAGGTCACATGCACTGACTCCACAGACGCGGCCAGGTaGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KVTCTDSTDAAR*MDLRESEESLL
Trigger: CAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAACCTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCCAGGTACAAACACTCTaGTCCCATTGCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCQVQTL*SHCQHQ
Trigger: CTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTG...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGTTTTACCCTCGAAGCTaGCGAAGAAGAACATGCCTC +
Preference number: 4 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSFYPRS*RRRTCL
Trigger: GAGGCATGTTCTTCTTCGTCAGCTTCGAGGGTAAAA...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSDASW*GPGGFL
Trigger: AAGGAAGCCTCCCGGACCTCACCATGATGCATCTGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTCTCCGTCCTCCTCTaGCTCCTCGCTGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLSVLL*LLAVFP
Trigger: GGGAAAGACAGCGAGGAGTCAGAGGAGGACGGAGAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAACATTGTCACCTGCCATaGTTCGCACTGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKHCHLP*FALQPC
Trigger: ACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATG...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTGTGCAGGCCAGGCTaGAAGCCTGGATCAACCAAC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELCRPG*KPGSTN
Trigger: GTTGGTTGATCCAGGCTTTCAGCCTGGCCTGCACAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTGACCATGGAAGCATaGTCAACCCAAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELTMEA*STQGRH
Trigger: GTGGCGGCCTTGGGTTGATCATGCTTCCATGGTCAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTGACCATGGAAGCATaGTCAACCCAAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLTMEA*STQGRH
Trigger: GTGGCGGCCTTGGGTTGATCATGCTTCCATGGTCAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCACTGACCATGGAAGCATaGTCAACCCAAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: ADEEDISMLSILRSLGRALTMEA*STQGRH
Trigger: GTGGCGGCCTTGGGTTGATCATGCTTCCATGGTCAG...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESGPLA*VQHGTL
Trigger: CAGTGTACCATGCTGTACTCACGCCAGGGGACCACT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTGGGAAGCAGGAGCGTaGTCATGGAGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCWEAGA*SWRQRP
Trigger: TGGTCTCTGCCTCCATGATCACGCTCCTGCTTCCCA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGAGTCCCTCCTGCCATaGCCGAGGGAGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRESLLP*PRESSS
Trigger: TGATGAGCTCTCCCTCGGTCATGGCAGGAGGGACTC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGAAGGTCACATGCACTaGCTCCACAGACGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSREGHMH*LHRRGQ
Trigger: CTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCACCAGTACAGTCTTCCTaGGGTAGAGGGCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: ADEEDISMLSILRSLGRAPVQSS*GRGLGP
Trigger: TGGACCGAGCCCTCTACCTCAGGAAGACTGTACTGG...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCGCTTACTGGGTGGGCTaGTGGTCCACAAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCAYWVG*WSTKNL
Trigger: CAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGC...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACGATATACGCGACCATTaGCTTTGGCATGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDDIRDH*LWHGCR
Trigger: TCTACAGCCATGCCAAAGTCAATGGTCGCGTATATC...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACCGGCCCATTTAGTGTaGATCCTGGATCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRPAHLV*ILDPAA
Trigger: CGCTGCCGGATCCAGGATTCACACTAAATGGGCCGG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGAGTCCAGTCATATTTTaGCACAGGCCTGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSSPVIF*HRPGKF
Trigger: GAACTTCCCAGGCCTGTGGCAAAATATGACTGGACT...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTGCCATACGGTTCTTaGCTGCAGAGTCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELPYGS*LQSRPA
Trigger: CGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCGGAGGAGTCCCTCCTaGCATGACCGAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQERRSPS*HDRGRA
Trigger: AGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTCCGGGAAGGTCACATaGACTGACTCCACAGACGCG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSGKVT*TDSTDA
Trigger: CGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTCCGGACAGCTGTCTaGTGCTCCGGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLRTAV*CSGKVT
Trigger: TGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAATAGGGTTGGCGTGGTaGTACCACGACAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVIGLAW*YHDRSG
Trigger: CCCGGACCTGTCGTGGTACCACCACGCCAACCCTAT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTCAGCAGGCCATCAGATaGTTTGTAGTCATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTQQAIR*FVVILG
Trigger: ACCCAGGATGACTACAAACCATCTGATGGCCTGCTG...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCAGGGCCGTTCTCCATaGGCAGGCTTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSQGRSP*AGLGGW
Trigger: CCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACCGGTACTGAGGGGTaGAGTAGAGGTCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTGTEG*SRGRLC
Trigger: GCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAACCGGTACTGAGGGGTaGAGTAGAGGTCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GYCTWHRRAAEIGAAPRRTGTEG*SRGRLC
Trigger: GCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGT...TCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCCGGCTTCTCCAGGCTaGCAGTCAGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCPASPG*QSDASW
Trigger: CCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGACCACAGGACCCTCCTTaGATCCTTTCCGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRPQDPP*ILSAFV
Trigger: AACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGG...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCGGGATGCTCGTCAATaGTGTCCAGTCCCGACTCTC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCRDARQ*CPVPTL
Trigger: GAGAGTCGGGACTGGACACCATTGACGAGCATCCCG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACCTCGATGGTCTCAGTaGTCCCCTGGCGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEPRWSQ*SPGVST
Trigger: TGTACTCACGCCAGGGGACCACTGAGACCATCGAGG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCCTCCACCTCCTCGATaGTCTCAGTGGTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSPPPPR*SQWSPG
Trigger: GCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCCTCCACCTCCTCGATaGTCTCAGTGGTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQPPPPR*SQWSPG
Trigger: GCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGGCCTCGTACTCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTWPRTP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACCACATCGTACCCAGTaGCCTCGTACTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEPHRTQ*PRTPWP
Trigger: AGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGGGGAGGTAAGATGCTaGACCCCAGCTTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRGEVRC*TPACRC
Trigger: GCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGGGGAGGTAAGATGCTaGACCCCAGCTTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVGEVRC*TPACRC
Trigger: GCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACCCCAGGACTCGCGTTaGGTAGCCACAACGGATCTG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVPQDSR*VATTDL
Trigger: CAGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGGAGAGGGACGCTTTaGGAGGGTCCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTWRGTL*EGPGRR
Trigger: CCGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTGGTCCGGGTTCACTATaGTCTTCCAAGTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTGPGSL*SSKYLN
Trigger: GTTCAAGTACTTGGAAGATCATAGTGAACCCGGACC...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAGGTTGGGCCGCACAATaGAATCTGGGAAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: GYCTWHRRAAEIGAAPRRGWAAQ*NLGSTA
Trigger: GGCTGTACTTCCCAGATTTCATTGTGCGGCCCAACC...TCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACAGGGTTATGTTGGCTaGAGGAGGCCGCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEQGYVG*RRPHQG
Trigger: ACCTTGATGCGGCCTCCTTCAGCCAACATAACCCTG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESVAWP*CDPSVA
Trigger: AGCGACAGATGGATCGCATCAAGGCCAGGCAACAGA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTGACCATGGAAGCATaGTCAACCCAAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLTMEA*STQGRH
Trigger: GTGGCGGCCTTGGGTTGATCATGCTTCCATGGTCAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAGGCTGTCTGTGCACCTaGAGCAGCTCCGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPGCLCT*SSSGML
Trigger: GAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCC...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTGGCTGTCGTCCGGGCTaGCTGCCATACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFGCRPG*LPYGSC
Trigger: GCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCC...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGGCTGTCGTCCGGGCTaGCTGCCATACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTGCRPG*LPYGSC
Trigger: GCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTGGCCCAGAGGAAGATaGGGATGGGAAGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSWPRGR*GWEAGA
Trigger: CGCTCCTGCTTCCCATCCTCATCTTCCTCTGGGCCA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTGGCCCAGAGGAAGATaGGGATGGGAAGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPWPRGR*GWEAGA
Trigger: CGCTCCTGCTTCCCATCCTCATCTTCCTCTGGGCCA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAATGGCACTTCAAAATTaGTCGATGAAAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGMALQN*SMKEQS
Trigger: GCTCTGTTCTTTCATCGATCAATTTTGAAGTGCCAT...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGGAGAGCTCATCATCTaGTTCCTCCCTGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVGELII*FLPGHA
Trigger: GGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGAAGGTCACATGCACTaGCTCCACAGACGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQEGHMH*LHRRGQ
Trigger: CTGGCCGCGTCTGTGGAGTCAGTGCATGTGACCTTC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGATGTCTGCAGCTGCTaGGTGTTTCCCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEDVCSC*VFPKGP
Trigger: TGGGCCTTTGGGAAACACTCAGCAGCTGCAGACATC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGATGTCTGCAGCTGCTaGGTGTTTCCCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLDVCSC*VFPKGP
Trigger: TGGGCCTTTGGGAAACACTCAGCAGCTGCAGACATC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAAAGAACATCCAGAAGTaGATTCCGAACACAAGAATG +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGKNIQK*IPNTRM
Trigger: CATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTT...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAAAATTGTAGCTCTTGGTaGGGAAGTTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKNCSSW*GSSPGL
Trigger: GAGTCCTGGGGAACTTCCTCACCAAGAGCTACAATT...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCCCGCACACCACTTCTaGGGCCATCGCGTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSPAHHF*GHRVGP
Trigger: CGGACCGACGCGATGGCCTCAGAAGTGGTGTGCGGG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCTTCTGGCCCCGTGGCTaGGGGTATCTCTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGFWPRG*GYLFSD
Trigger: GTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAA...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAACTTGGAAGCCCCTCTaGAGCCACCGCGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVTWKPL*SHRVSF
Trigger: AAAGGAGACGCGGTGGCTTCAGAGGGGCTTCCAAGT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCTCCGGGTTACTCTGTaGTGCTTCGTCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCLRVTL*CFVCHR
Trigger: CCTGTGACAGACGAAGCAGCACAGAGTAACCCGGAG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATGCACAAGGGGCTCTTaGAGCCAGATGCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIECTRGS*SQMRIR
Trigger: TCTGATCCGCATCTGGCTGCAAGAGCCCCTTGTGCA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGGTAATCCACGGGGTTaGCGTTCACAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCGNPRG*RSQSPA
Trigger: TGCTGGTGACTGTGAACGGCAACCCCGTGGATTACC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAGTAGAGGTCGGCTTTaGCAGGGCCGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSRGRL*QGRSPW
Trigger: CCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTGAATCATCCAAAGAGTaGACGACCAGATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTESSKE*TTRSAA
Trigger: TGCTGCTGATCTGGTCGTGCACTCTTTGGATGATTC...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAATGCTCTGTGAGGTGCTaGCTCAGCAGTAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKCSVRC*LSSSQK
Trigger: TTTTTGGCTACTGCTGAGGCAGCACCTCACAGAGCA...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGATTTCTCTGGTCAGCATaGATCGTTCAATTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGFLWSA*IVQFSE
Trigger: TTCTGAGAATTGAACGATGCATGCTGACCAGAGAAA...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGAAGCAGCTCCGGGATaGTCGTCAATGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEEAAPG*SSMVSS
Trigger: ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSRSSQP*CRRVGP
Trigger: AGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGAGCCGAAGGACAGATaGTCGAAGCTCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCEPKDR*SKLTAL
Trigger: CAAGGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVHTVLA*RVVLRA
Trigger: GGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTGCCATACGGTTCTTaGCTGCAGAGTCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLPYGS*LQSRPA
Trigger: CGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPVVRAD*HTVLAC
Trigger: GCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGAC...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATCAGGGGAGGTAAGATaGTGGACCCCAGCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSGEVR*WTPACR
Trigger: CCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACGGAGGAGTCCCTCCTaGCATGACCGAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPRRSPS*HDRGRA
Trigger: AGCTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCCGGACAGCTGTCTGCTaGTCCGGGAAGGTCACATGC +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPRTAVC*SGKVTC
Trigger: GCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCG...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCGGACAGCTGTCTGCTaGTCCGGGAAGGTCACATGC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRTAVC*SGKVTC
Trigger: GCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCTCCGGACAGCTGTCTaGTGCTCCGGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELRTAV*CSGKVT
Trigger: TGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTCCGGACAGCTGTCTaGTGCTCCGGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLRTAV*CSGKVT
Trigger: TGTGACCTTCCCGGAGCAGCAGACAGCTGTCCGGAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGACTGCTGTTTCGGGTaGTTGTGCTGCCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCDCCFG*LCCLFG
Trigger: CCCAAAGAGGCAGCACAAGCACCCGAAACAGCAGTC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGGGGCAAGAAGGGCGTaGTGTGCTCCCGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSGARRA*CAPAWL
Trigger: GAGCCAGGCGGGAGCACAGCACGCCCTTCTTGCCCC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAGGATAGGGTTGGCGTaGTGGTACCACGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRRIGLA*WYHDRS
Trigger: GGACCTGTCGTGGTACCACCACGCCAACCCTATCCT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACCGCTGTTATTTGGATaGGGCTACAAGCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVPLLFG*GYKPGL
Trigger: AAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTCCATGGGCAGGCTTaGGTGGATGGTGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLHGQA*VDGVVI
Trigger: GATTACCACACCATCCACCCAAGCCTGCCCATGGAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAACCGGTACTGAGGGGTaGAGTAGAGGTCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRTGTEG*SRGRLC
Trigger: GCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCCTTCTTCCTCCTCTTTaGGCTCTCCTTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCLLPPL*ALLPLV
Trigger: TACAAGTGGAAGGAGAGCCCAAAGAGGAGGAAGAAG...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCCCAGACGGCGCAGCTTaGCGTACGGCAGAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGPDGAA*RTAEQK
Trigger: CTTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGG...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCCAGACGGCGCAGCTTaGCGTACGGCAGAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSPDGAA*RTAEQK
Trigger: CTTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGGAAGCAGCAGTACTTaGGCCAGATCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCGSSST*ARSLRW
Trigger: CCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCGGCAAGGAGCAGGTaGGATGCCAATGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSARSR*DANADE
Trigger: TTCATCTGCATTGGCATCCCACCTGCTCCTTGCCGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGTCCTGGCCTTCCCCTaGCTCCTGGGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTVLAFP*LLGQAQ
Trigger: CTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGAC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQGVSTA*YTAWAR
Trigger: GCGAGCCCACGCAGTGTACCATGCTGTACTCACGCC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACCACATCGTACCCAGTaGCCTCGTACTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRPHRTQ*PRTPWP
Trigger: AGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACCACATCGTACCCAGTaGCCTCGTACTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVPHRTQ*PRTPWP
Trigger: AGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACTTGCTGTAGGAGGGTaGGGCCTCCACATCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTLAVGG*GLHIPV
Trigger: GACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTGGCCGTCAGCTCATaGGTCAGGGGAGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLAVSS*VRGGKM
Trigger: CATCTTACCTCCCCTGACCCATGAGCTGACGGCCAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGAAAAGCTGGATCTCTaGGATGGCTCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCEKLDL*DGSELL
Trigger: CAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAACGGCCCCGGGACCTaGTCCTCTGACAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSNGPGT*SSDSEE
Trigger: CTCTTCACTGTCAGAGGACCAGGTCCCGGGGCCGTT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCGAGACGTCCAGGGGCTaGTTGATGACCCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPETSRG*LMTPAT
Trigger: TGTGGCTGGGGTCATCAACCAGCCCCTGGACGTCTC...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCGCATATCGGGTGAGTaGGTCTCCCACTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSRISGE*VSHSLL
Trigger: GAGGAGGGAGTGGGAGACCCACTCACCCGATATGCG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
3UTR CAA 72 bp CACTGGCGTCTTCACGGGCAATTAGTTCCCTCTCTTTaGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HWRLHGQLVPSL*LLETQVGAVCP
Trigger: GGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGGAACTAATTGCCCGTGAAGACGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 72 bp CCCAGGGTAATTGTGACGGAGACGTCCAGGGGCTGGTaGATGACCCCAGCCACAGATTTGATCAAAGACATG +
Preference number: 4 (lower is better)
Translates to: PRVIVTETSRGW*MTPATDLIKDM
Trigger: CATGTCTTTGATCAAATCTGTGGCTGGGGTCATCAACCAGCCCCTGGACGTCTCCGTCACAATTACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACAGGTACAAACACTCTaGTCCCATTGCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVQVQTL*SHCQHQ
Trigger: CTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATTAAGAAGAGCACAGTaGGGCGGTCAATCACCAGGT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVLRRAQ*GGQSPG
Trigger: ACCTGGTGATTGACCGCCTCACTGTGCTCTTCTTAA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGGTTGGGCCGCACAATaGAATCTGGGAAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVGWAAQ*NLGSTA
Trigger: GGCTGTACTTCCCAGATTTCATTGTGCGGCCCAACC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGGTTGGGCCGCACAATaGAATCTGGGAAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRGWAAQ*NLGSTA
Trigger: GGCTGTACTTCCCAGATTTCATTGTGCGGCCCAACC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCATTGTCACCTGCCATaGTTCGCACTGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCHCHLP*FALQPC
Trigger: ACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRSVAWP*CDPSVA
Trigger: AGCGACAGATGGATCGCATCAAGGCCAGGCAACAGA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSGPLA*VQHGTL
Trigger: CAGTGTACCATGCTGTACTCACGCCAGGGGACCACT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGGCCCAGAGGAAGATaGGGATGGGAAGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTWPRGR*GWEAGA
Trigger: CGCTCCTGCTTCCCATCCTCATCTTCCTCTGGGCCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTACCATGGTTCCAAACTaGATGAGGACCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTTMVPN*MRTITK
Trigger: TTTGGTGATGGTCCTCATTCAGTTTGGAACCATGGT...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCCAGTACAGTCTTCCTaGGGTAGAGGGCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSPVQSS*GRGLGP
Trigger: TGGACCGAGCCCTCTACCTCAGGAAGACTGTACTGG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATGTTTCCAGTCAGGTTaGGAACCCACCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVCFQSG*EPTTHC
Trigger: ACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTGAAGCTCTTCAAACATaGTGGAGTGAGAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTEALQT*WSEKSH
Trigger: GTGGGATTTCTCACTCCATCATGTTTGAAGAGCTTC...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATTCTGGCCCCGTGGCTaGGGGTATCTCTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTFWPRG*GYLFSD
Trigger: GTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAGAGCGCATATCGGGTaGGTGGGTCTCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTRAHIG*VGLPLP
Trigger: AGGGAGTGGGAGACCCACTCACCCGATATGCGCTCT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAGCTCTCTGGAATGCTaGCCTTCGTGGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSSLEC*PSWRFF
Trigger: GAAGAACCTCCACGAAGGTCAGCATTCCAGAGAGCT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACCCATTGTATCGGAATaGACATGCTACTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVPIVSE*TCYCQA
Trigger: TGCCTGGCAGTAGCATGTGCATTCCGATACAATGGG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGCGTCCCGTATGTCCTTaGATCGTCGTTTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGERPVCP*IVVFVG
Trigger: ACCAACAAAAACGACGATGCAAGGACATACGGGACG...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACGATACCAAACAACCTTaGATAGTAGTCATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDDTKQP*IVVIGW
Trigger: CCACCCAATGACTACTATGCAAGGTTGTTTGGTATC...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGTGGGGTAATGGGTTaGGTACCACAGGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSGVMG*VPQAPP
Trigger: AGGCGGAGCCTGTGGTACGCAACCCATTACCCCACT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGGTAATCCACGGGGTTaGCGTTCACAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVGNPRG*RSQSPA
Trigger: TGCTGGTGACTGTGAACGGCAACCCCGTGGATTACC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTCGACATTGTCACCTaGCATGATTCGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLDIVT*HDSHCS
Trigger: GCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCTCGACATTGTCACCTaGCATGATTCGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCLDIVT*HDSHCS
Trigger: GCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGAAGCAGCTCCGGGATaGTCGTCAATGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVEAAPG*SSMVSS
Trigger: ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCTGCAGAGTCGTCCTaGGAGCCGAAGGACAGATGC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPPAESS*EPKDRC
Trigger: GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTGCCATACGGTTCTTaGCTGCAGAGTCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLPYGS*LQSRPA
Trigger: CGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTVVRAD*HTVLAC
Trigger: GCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGAC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGTCAGGGGAGGTAAGATaGTGGACCCCAGCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELSGEVR*WTPACR
Trigger: CCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGA...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCCGGGAAGGTCACATaGACTGACTCCACAGACGCG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSGKVT*TDSTDA
Trigger: CGCGTCTGTGGAGTCAGTGCATGTGACCTTCCCGGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGACTGCTGTTTCGGGTaGTTGTGCTGCCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVDCCFG*LCCLFG
Trigger: CCCAAAGAGGCAGCACAAGCACCCGAAACAGCAGTC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCATCTCTCCAGGAAGTaGACGGGCCCCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQHLSRK*TGPTEE
Trigger: TTCCTCTGTGGGGCCCGTGCACTTCCTGGAGAGATG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCAGGTAGGAGCTGTCTaGCCCCTATTGCTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLQVGAV*PLLLLH
Trigger: ATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTACAGCATGGTACACTaGGTGGGCTCGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCYSMVH*VGSLDA
Trigger: AGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCAGGATAGGGTTGGCGTaGTGGTACCACGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGRIGLA*WYHDRS
Trigger: GGACCTGTCGTGGTACCACCACGCCAACCCTATCCT...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACCGCTGTTATTTGGATaGGGCTACAAGCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEPLLFG*GYKPGL
Trigger: AAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTCCCCGCTGTTATTTaGATGGGGCTACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLPAVI*MGLQAR
Trigger: CCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTCCATGGGCAGGCTTaGGTGGATGGTGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLHGQA*VDGVVI
Trigger: GATTACCACACCATCCACCCAAGCCTGCCCATGGAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACCAGACGGCGCAGCTTaGCGTACGGCAGAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTPDGAA*RTAEQK
Trigger: CTTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGGAAGCAGCAGTACTTaGGCCAGATCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRGSSST*ARSLRW
Trigger: CCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTCGGCAAGGAGCAGGTaGGATGCCAATGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSARSR*DANADE
Trigger: TTCATCTGCATTGGCATCCCACCTGCTCCTTGCCGA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCGGGATGCTCGTCAATaGTGTCCAGTCCCGACTCTC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRDARQ*CPVPTL
Trigger: GAGAGTCGGGACTGGACACCATTGACGAGCATCCCG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCCGGGATGCTCGTCAATaGTGTCCAGTCCCGACTCTC +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPRDARQ*CPVPTL
Trigger: GAGAGTCGGGACTGGACACCATTGACGAGCATCCCG...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGCATGGTACACTGCGTaGGCTCGCTGGAGATACTGT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRAWYTA*ARWRYC
Trigger: ACAGTATCTCCAGCGAGCCCACGCAGTGTACCATGC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR CCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCCCTCGATGGTCTCAGTaGTCCCCTGGCGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPPRWSQ*SPGVST
Trigger: TGTACTCACGCCAGGGGACCACTGAGACCATCGAGG...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCCCACATCGTACCCAGTaGCCTCGTACTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGPHRTQ*PRTPWP
Trigger: AGGCCAAGGAGTACGAGGCCACTGGGTACGATGTGG...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCATCCCCGTCCAAGGTaGAGAACTGTGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCHPRPR*RTVSAL
Trigger: AAGAGCTGACACAGTTCTCCACCTTGGACGGGGATG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGGGGAGGTAAGATGCTaGACCCCAGCTTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTGEVRC*TPACRC
Trigger: GCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTGGCCGTCAGCTCATaGGTCAGGGGAGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLAVSS*VRGGKM
Trigger: CATCTTACCTCCCCTGACCCATGAGCTGACGGCCAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGACCGGCGGCTGGGCCTaGGGACGGACAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPTGGWA*GRTTWP
Trigger: GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTTCCAGAACCGGCGGCTaGGCCTGGGGACGGACAACA +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVSRTGG*AWGRTT
Trigger: TGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGA...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTCCAGAACCGGCGGCTaGGCCTGGGGACGGACAACA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSRTGG*AWGRTT
Trigger: TGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCCTCAGTATAGACGATaGCCATCATCCAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCPQYRR*PSSRTG
Trigger: GCCGGTTCTGGATGATGGCCATCGTCTATACTGAGG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACATCTGATTCCTCCCTaGCCATGCCACTTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVHLIPP*PCHFQS
Trigger: TGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGCCCATGCCCGTCTATaGCCTCTCGCCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRAHARL*PLAAGS
Trigger: GCTGCCGGCGGCGAGAGGCCATAGACGGGCATGGGC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGAGACGTCCAGGGGCTaGTTGATGACCCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTETSRG*LMTPAT
Trigger: TGTGGCTGGGGTCATCAACCAGCCCCTGGACGTCTC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAGGCTTCCTTCCGGGTaGGCCAGTTCATTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVRLPSG*ASSFWW
Trigger: CCACCAAAATGAACTGGCCCACCCGGAAGGAAGCCT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACTTTACAATTGTGGCCTaGAAAAGTTCAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDFTIVA*KSSATL
Trigger: CAAGGTGGCTGAACTTTTCCAGGCCACAATTGTAAA...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGCTTTGGGAGGGTCCTaGGAGGCGGCGCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRALGGS*EAARRA
Trigger: TGCTCGCCGCGCCGCCTCCCAGGACCCTCCCAAAGC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
3UTR CAA 72 bp TGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTaGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: WVGLFTLLPHVC*HRRPQPSRMVP
Trigger: GGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
3UTR CAA 72 bp TGTTTCGGGTGCTTGTGCTGCCTCTTTGGGATCTGTTaGAAGAAAAGCTGGATCTCTGGGATGGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: CFGCLCCLFGIC*KKSWISGMARS
Trigger: GCTCCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAGGCAGCACAAGCACCCGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGAGCTTTTTGCTCTGTaGGGTGCTGCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVELFAL*GAASAV
Trigger: TACTGCTGAGGCAGCACCTCACAGAGCAAAAAGCTC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATTAAGAAGAGCACAGTaGGGCGGTCAATCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELRRAQ*GGQSPG
Trigger: ACCTGGTGATTGACCGCCTCACTGTGCTCTTCTTAA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCAGGGTTATGTTGGCTaGAGGAGGCCGCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEQGYVG*RRPHQG
Trigger: ACCTTGATGCGGCCTCCTTCAGCCAACATAACCCTG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGGGAAGTGTACAGGGTaGATTAGCAGCAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEGKCTG*ISSRHL
Trigger: CAAATGCCTGCTGCTAATTCACCCTGTACACTTCCC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGGCTGTCTGTGCACCTaGAGCAGCTCCGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSGCLCT*SSSGML
Trigger: GAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGAGCCAGGAGCTGGATaGGGTCATAGAGAACATAAC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLEPGAG*GHREHN
Trigger: GTTATGTTCTCTATGACCTCATCCAGCTCCTGGCTC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACACTGCTTCCTTTTTaGCTGCTGTTTCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTLLPF*LLFRVL
Trigger: AAGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGTGTAAAAGAACTGTTTaGTGGGCACATAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSCKRTV*WAHRSP
Trigger: TGGAGATCTATGTGCCCATCAAACAGTTCTTTTACA...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGGATGTCTGCAGCTGCTaGGTGTTTCCCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELDVCSC*VFPKGP
Trigger: TGGGCCTTTGGGAAACACTCAGCAGCTGCAGACATC...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTGACAGTGAAGAGGTaGTGTCTGCAGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLTVKR*CLQLLS
Trigger: ACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTGACAGTGAAGAGGTaGTGTCTGCAGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLTVKR*CLQLLS
Trigger: ACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCACAACCAGGTTCTGGCTaGATTTCCTCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ADEEDISMLSILRSLGRAQPGSG*ISSQSH
Trigger: GTGTGACTGAGAGGAAATTCAGCCAGAACCTGGTTG...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAATTGTAGCTCTTGGTaGGGAAGTTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIENCSSW*GSSPGL
Trigger: GAGTCCTGGGGAACTTCCTCACCAAGAGCTACAATT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAATTGTAGCTCTTGGTaGGGAAGTTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCNCSSW*GSSPGL
Trigger: GAGTCCTGGGGAACTTCCTCACCAAGAGCTACAATT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCGGAATAAGAAGAGGTTaGCGTAATTGTAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCGIRRG*RNCSSW
Trigger: CCAAGAGCTACAATTACGTCAACCTCTTCTTATTCC...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGCTTACTGGGTGGGCTaGTGGTCCACAAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEAYWVG*WSTKNL
Trigger: CAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATGTTTCCAGTCAGGTTaGGAACCCACCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIECFQSG*EPTTHC
Trigger: ACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACCAGTTCCAGGGCCTaGGAGTTCGGATTGTATATT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTSSRA*EFGLYI
Trigger: AATATACAATCCGAACTCTCAGGCCCTGGAACTGGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCCTCCGGGTTACTCTGTaGTGCTTCGTCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGLRVTL*CFVCHR
Trigger: CCTGTGACAGACGAAGCAGCACAGAGTAACCCGGAG...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AGCTCATGGGTCAGGGGAGGTAAGATGCTGGACCCCAGCTTGTCGGTGCGGCTGCATATTTTCTTCTGTTaGGAATCATCCAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSWVRGGKMLDPSLSVRLHIFFC*ESSKEC
Trigger: GCACTCTTTGGATGATTCGCAACAGAAGAAAATATG...CAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTTTGCTCTGTGAGGTaGTGCCTCAGCAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLFCSVR*CLSSSQ
Trigger: TTGGCTACTGCTGAGGCAGCACCTCACAGAGCAAAA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGTCCCAAATGATTCCTaGTTCCCCACTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLVPNDS*FPTGKC
Trigger: ACACTTCCCAGTGGGGAAGCAGGAATCATTTGGGAC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSSESF*MSWPSP
Trigger: AGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGAAGCAGCTCCGGGATaGTCGTCAATGGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEEAAPG*SSMVSS
Trigger: ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATACAGCATGGTACACTaGGTGGGCTCGCTGGAGATA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRYSMVH*VGSLEI
Trigger: TATCTCCAGCGAGCCCACGCAGTGTACCATGCTGTA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTGGGCTCAGGCGCCGTaGTCCCTGCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPWAQAP*SLPPPP
Trigger: AGGAGGAGGAGGCAGGGAGCACGGCGCCTGAGCCCA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGAGCCGAAGGACAGATaGTCGAAGCTCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEEPKDR*SKLTAL
Trigger: CAAGGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGGAGCCGAAGGACAGATaGTCGAAGCTCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELEPKDR*SKLTAL
Trigger: CAAGGCTGTGAGCTTCGAGCATCTGTCCTTCGGCTC...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAATTCCTCCCTGGCCATaGCACTTTCAGTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVIPPWP*HFQSCH
Trigger: ATGACATGACTGAAAGTGGCATGGCCAGGGAGGAAT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGGATGGCTCGGAGCTaGTGCCGGAGCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGMARS*CRSASS
Trigger: GGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGGGATGGCTCGGAGCTaGTGCCGGAGCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPGMARS*CRSASS
Trigger: GGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCATCCC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAAGAAGGGCGTGCTGTaGTCCCGCCTGGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPKKGVL*SRLAPG
Trigger: CCCGGGAGCCAGGCGGGAGCACAGCACGCCCTTCTT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAGATGCGGATCAGAGTaGCCAGAGTGTAGTACATCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVRCGSE*PECSTS
Trigger: TGATGTACTACACTCTGGCCACTCTGATCCGCATCT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AGCTCATGGGTCAGGGGAGGTAAGATGCTGGACCCCAGCTTGTCGGTGCGGCTGAGTCATCCTGGGTCATaGATAAAAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SSWVRGGKMLDPSLSVRLSHPGS*IKVFSH
Trigger: ATGAGAGAAAACTTTTATCCATGACCCAGGATGACT...CAGCCGCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGACCCATGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCAGGGCCGTTCTCCATaGGCAGGCTTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSQGRSP*AGLGGW
Trigger: CCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAACCGGTACTGAGGGGTaGAGTAGAGGTCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTTGTEG*SRGRLC
Trigger: GCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACCGGCTTCTCCAGGCTaGCAGTCAGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTPASPG*QSDASW
Trigger: CCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAGCAGGCGTGGATCATaGCATAGAAATCCATTCGCT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSRRGS*HRNPFA
Trigger: AGCGAATGGATTTCTATGCCATGATCCACGCCTGCT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGGAAGCAGCAGTACTTaGGCCAGATCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQGSSST*ARSLRW
Trigger: CCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCATGCAGATGAAATACTaGAAGGTGATGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCMQMKY*KVMMHA
Trigger: GGCATGCATCATCACCTTCCAGTATTTCATCTGCAT...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESFCMS*PSPGSW
Trigger: CCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSFCMS*PSPGSW
Trigger: CCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCCACAGGACCCTCCTTaGATCCTTTCCGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQPQDPP*ILSAFV
Trigger: AACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTGGATTTCTTTTTGATTaGTTCATCCTCCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTGFLFD*FILPVF
Trigger: GAAGACCGGGAGGATGAACCAATCAAAAAGAAATCC...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACGGGATGCTCGTCAATaGTGTCCAGTCCCGACTCTC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTRDARQ*CPVPTL
Trigger: GAGAGTCGGGACTGGACACCATTGACGAGCATCCCG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCACTGCGTGGGCTCGCTaGAGATACTGTCATGTGAAT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCTAWAR*RYCHVN
Trigger: ATTCACATGACAGTATCTCCAGCGAGCCCACGCAGT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACCTCGATGGTCTCAGTaGTCCCCTGGCGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTPRWSQ*SPGVST
Trigger: TGTACTCACGCCAGGGGACCACTGAGACCATCGAGG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCCTCCTCGGCACCCATaGCTCCCACATCGTACCCAG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSPPRHP*LPHRTQ
Trigger: CTGGGTACGATGTGGGAGCCATGGGTGCCGAGGAGG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACTGGCCGTCAGCTCATaGGTCAGGGGAGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPLAVSS*VRGGKM
Trigger: CATCTTACCTCCCCTGACCCATGAGCTGACGGCCAG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACCTCAGTATAGACGATaGCCATCATCCAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRPQYRR*PSSRTG
Trigger: GCCGGTTCTGGATGATGGCCATCGTCTATACTGAGG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCATCTGATTCCTCCCTaGCCATGCCACTTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCHLIPP*PCHFQS
Trigger: TGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCTTGTGCTGCCTCTTTaGGATCTGTTTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSLVLPL*DLFEEK
Trigger: CTTTTCTTCAAACAGATCCCAAAGAGGCAGCACAAG...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACAAAGTACCAAAGCTaGGCAACCAGGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTKYQS*ATRFWL
Trigger: CAGCCAGAACCTGGTTGCCCAGCTTTGGTACTTTGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELPQWG*SAVYCI
Trigger: AATGCAATATACAGCGCTCCATCCCCACTGGGGAAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCAGCAGCTTCCCCAGTaGGGATGGAGCGCTGTATAT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQQQLPQ*GWSAVY
Trigger: ATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTCAGCTTTTACAATTGTaGCCTGGAAAAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSSGPVAEGISSPTPANTQLLQL*PGKVQP
Trigger: TGGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTG...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGAGCGTGGGGAGAAATaGAGACCAGAGCGCATATCG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEERGEK*RPERIS
Trigger: CGATATGCGCTCTGGTCTCCATTTCTCCCCACGCTC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGGTGCAATACGATGTTaGGCTTCAAGGCTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRGAIRC*ASRLTN
Trigger: GTTGGTGAGCCTTGAAGCTCAACATCGTATTGCACC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACAGGTACAAACACTCTaGTCCCATTGCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVQVQTL*SHCQHQ
Trigger: CTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCGATCTTCCAAGTACTTaGACAGTCCGTTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCDLPST*TVRLNY
Trigger: GTAATTCAAACGGACTGTTCAAGTACTTGGAAGATC...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGGTCCGGGTTCACTATaGTCTTCCAAGTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLGPGSL*SSKYLN
Trigger: GTTCAAGTACTTGGAAGATCATAGTGAACCCGGACC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATGCCCAGGACTTTCATaGTGTCCTGCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIECPGLS*CPAHLL
Trigger: AAGAAGATGAGCAGGACATCATGAAAGTCCTGGGCA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSDASW*GPGGFL
Trigger: AAGGAAGCCTCCCGGACCTCACCATGATGCATCTGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCACCAAAATCCACCACATaGACACCTGCAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ADEEDISMLSILRSLGRAPKSTT*TPAACE
Trigger: TTCACAAGCTGCAGGTGTTCATGTGGTGGATTTTGG...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCATTGTCACCTGCCATaGTTCGCACTGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQHCHLP*FALQPC
Trigger: ACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACAGGGTTATGTTGGCTaGAGGAGGCCGCATCAAGGT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTQGYVG*RRPHQG
Trigger: ACCTTGATGCGGCCTCCTTCAGCCAACATAACCCTG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAGCGCAGGATGCTCTTaGTGGGTTTCAACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSAGCS*WVSTAN
Trigger: ATTTGCTGTTGAAACCCATCAAGAGCATCCTGCGCT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSVAWP*CDPSVA
Trigger: AGCGACAGATGGATCGCATCAAGGCCAGGCAACAGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCACACTGCTTCCTTTTTaGCTGCTGTTTCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEITLLPF*LLFRVL
Trigger: AAGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGT...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACACTGCTTCCTTTTTaGCTGCTGTTTCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTLLPF*LLFRVL
Trigger: AAGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCTGACAGTGAAGAGGTaGTGTCTGCAGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELTVKR*CLQLLS
Trigger: ACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAAGCCAACACTTCAGGATaGATATGTGAGCATAGATGT +
Preference number: 4 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKANTSG*ICEHRC
Trigger: ACATCTATGCTCACATATTCATCCTGAAGTGTTGGC...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCACCAGTTCCAGGGCCTaGGAGTTCGGATTGTATATT +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEITSSRA*EFGLYI
Trigger: AATATACAATCCGAACTCTCAGGCCCTGGAACTGGT...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAAGGGTGGACTGCCTTaGGAACAGCATGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQKGGLP*EQHGCF
Trigger: GAAGCAACCATGCTGTTCTCAAGGCAGTCCACCCTT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTCTTCAGGGGTAGCTaGTGCCGGGGCCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFFRGS*CRGLGE
Trigger: CTCTCCAAGGCCCCGGCATCAGCTACCCCTGAAGAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCGTCCCGTATGTCCTTaGATCGTCGTTTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCRPVCP*IVVFVG
Trigger: ACCAACAAAAACGACGATGCAAGGACATACGGGACG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCGTCCCGTATGTCCTTaGATCGTCGTTTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLRPVCP*IVVFVG
Trigger: ACCAACAAAAACGACGATGCAAGGACATACGGGACG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACGGGTTACTCTGTGCTaGTTCGTCTGTCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVRVTLC*FVCHRF
Trigger: AAACCTGTGACAGACGAAGCAGCACAGAGTAACCCG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACTCCGGGTTACTCTGTaGTGCTTCGTCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTLRVTL*CFVCHR
Trigger: CCTGTGACAGACGAAGCAGCACAGAGTAACCCGGAG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACCAGGACCACCAGGTaGACAGACCCAAAAATACAA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTRTTR*TDPKIQ
Trigger: TTGTATTTTTGGGTCTGTGCACCTGGTGGTCCTGGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGAATCATCCAAAGAGTaGACGACCAGATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLESSKE*TTRSAA
Trigger: TGCTGCTGATCTGGTCGTGCACTCTTTGGATGATTC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATCTTGCAGAGCTTTTTaGTCTGTGAGGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRSCRAF*SVRCCL
Trigger: GAGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAGTGCAGGTGTAAAATaGACACCAGCAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSAGVK*TPAERR
Trigger: CCTCCTTTCTGCTGGTGTGCATTTTACACCTGCACT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAGTGCAGGTGTAAAATaGACACCAGCAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSAGVK*TPAERR
Trigger: CCTCCTTTCTGCTGGTGTGCATTTTACACCTGCACT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGACGATGGCTTTCCTTCTaGGTCTATATAAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRRWLSF*VYIRQR
Trigger: TCGCTGTCTTATATAGACGCAGAAGGAAAGCCATCG...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTCGACATTGTCACCTaGCATGATTCGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLDIVT*HDSHCS
Trigger: GCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGTCCCAAATGATTCCTaGTTCCCCACTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRVPNDS*FPTGKC
Trigger: ACACTTCCCAGTGGGGAAGCAGGAATCATTTGGGAC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSRSSQP*CRRVGP
Trigger: AGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATGGCTCGGAGCTGCTaGCGGAGCGCTTCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPMARSC*RSASSG
Trigger: TCCGGAGGAAGCGCTCCGGCAGCAGCTCCGAGCCAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTGCTTCCTTTTTGACTaGTGTTTCGGGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLCFLFD*CFGCLC
Trigger: GCACAAGCACCCGAAACAGCAGTCAAAAAGGAAGCA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCGTGTATCATTTTCTaGTTACTGGGTGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSCIIF*LLGGLM
Trigger: CATCAGCCCACCCAGTAAGCAGAAAATGATACACGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATGGAGCGCTGTATATTaGATTGTAGCATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVWSAVY*IVASLQ
Trigger: CTGGAGAGATGCTACAATGCAATATACAGCGCTCCA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGCCTCATGTCTGTTTaGACAGGAGACCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTCLMSV*TGDRSP
Trigger: AGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGGACGCAAGGCCCATaGCCGTCTATGGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGTQGP*PSMASR
Trigger: GCGAGAGGCCATAGACGGGCATGGGCCTTGCGTCCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAGATGCGGATCAGAGTaGCCAGAGTGTAGTACATCA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIERCGSE*PECSTS
Trigger: TGATGTACTACACTCTGGCCACTCTGATCCGCATCT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAGATGCGGATCAGAGTaGCCAGAGTGTAGTACATCA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLRCGSE*PECSTS
Trigger: TGATGTACTACACTCTGGCCACTCTGATCCGCATCT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCTTCTTCCTCCTCTTTaGGCTCTCCTTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCLLPPL*ALLPLV
Trigger: TACAAGTGGAAGGAGAGCCCAAAGAGGAGGAAGAAG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAGCAGGCGTGGATCATaGCATAGAAATCCATTCGCT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSRRGS*HRNPFA
Trigger: AGCGAATGGATTTCTATGCCATGATCCACGCCTGCT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGCCAGATCTCTGCGATaGCTTTCCTTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVARSLR*LSFCVY
Trigger: ATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGCCAGATCTCTGCGATaGCTTTCCTTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRARSLR*LSFCVY
Trigger: ATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGTCGGCAAGGAGCAGGTaGGATGCCAATGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLSARSR*DANADE
Trigger: TTCATCTGCATTGGCATCCCACCTGCTCCTTGCCGA...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGCCAGGCTGAAAGCCTaGATCAACCAACAACTATTG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEARLKA*INQQLL
Trigger: CAATAGTTGTTGGTTGATCCAGGCTTTCAGCCTGGC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGCATCCCCGTCCAAGGTaGAGAACTGTGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQHPRPR*RTVSAL
Trigger: AAGAGCTGACACAGTTCTCCACCTTGGACGGGGATG...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCCAGAACCGGCGGCTaGGCCTGGGGACGGACAACA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSRTGG*AWGRTT
Trigger: TGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATGTTTGAAGAAAAGCTaGATCTCTGGGATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIECLKKS*ISGMAR
Trigger: CCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAACGAGGCGAAACCCTTaGAATAAGAAGAGGTTGACG +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIETRRNP*NKKRLT
Trigger: CGTCAACCTCTTCTTATTCCAAGGGTTTCGCCTCGT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCACGAGGCGAAACCCTTaGAATAAGAAGAGGTTGACG +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEITRRNP*NKKRLT
Trigger: CGTCAACCTCTTCTTATTCCAAGGGTTTCGCCTCGT...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGTTCAACTGGCTTTGTTaGGCACTCATTGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSFNWLC*ALIVKI
Trigger: TATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAA...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTTCTGCTTACTGGGTaGGCTGATGGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLFLLTG*ADGPQR
Trigger: TCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTTCTGCTTACTGGGTaGGCTGATGGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCFLLTG*ADGPQR
Trigger: TCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTCCCAATAGCTCTCTaGAATGCTGACCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLFPIAL*NADLRG
Trigger: TCCACGAAGGTCAGCATTCCAGAGAGCTATTGGGAA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCAGGTACAAACACTCTaGTCCCATTGCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQQVQTL*SHCQHQ
Trigger: CTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGCTTGAACAGTCCGTTTaGATTACTGACTTGATACCA +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGELEQSV*ITDLIP
Trigger: TGGTATCAAGTCAGTAATTCAAACGGACTGTTCAAG...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATGCCCAGGACTTTCATaGTGTCCTGCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVCPGLS*CPAHLL
Trigger: AAGAAGATGAGCAGGACATCATGAAAGTCCTGGGCA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATTTTACCCTCGAAGCTaGCGAAGAAGAACATGCCTC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVFYPRS*RRRTCL
Trigger: GAGGCATGTTCTTCTTCGTCAGCTTCGAGGGTAAAA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATTTTACCCTCGAAGCTaGCGAAGAAGAACATGCCTC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRFYPRS*RRRTCL
Trigger: GAGGCATGTTCTTCTTCGTCAGCTTCGAGGGTAAAA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAGCGCAGGATGCTCTTaGTGGGTTTCAACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRSAGCS*WVSTAN
Trigger: ATTTGCTGTTGAAACCCATCAAGAGCATCCTGCGCT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCTGTGCAGGCCAGGCTaGAAGCCTGGATCAACCAAC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLCRPG*KPGSTN
Trigger: GTTGGTTGATCCAGGCTTTCAGCCTGGCCTGCACAG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGGGAAGTGTACAGGGTaGATTAGCAGCAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEGKCTG*ISSRHL
Trigger: CAAATGCCTGCTGCTAATTCACCCTGTACACTTCCC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAAGTTCAGCTCCTCTTaGTGCCAGAATCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSKFSSS*CQNLGS
Trigger: GCTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAACAAACTGGAATGCTaGCCTTCGTGGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRNKLEC*PSWRFF
Trigger: GAAGAACCTCCACGAAGGTCAGCATTCCAGTTTGTT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGCTGTCGTCCGGGCTaGCTGCCATACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGCRPG*LPYGSC
Trigger: GCAAGAACCGTATGGCAGTCAGCCCGGACGACAGCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCACGTAGAATTTCTCTaGCTCTTCAAGCTCATCGTC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLHVEFL*LFKLIV
Trigger: GACGATGAGCTTGAAGAGTCAGAGAAATTCTACGTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGAGCCAGGAGCTGGATaGGGTCATAGAGAACATAAC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEEPGAG*GHREHN
Trigger: GTTATGTTCTCTATGACCTCATCCAGCTCCTGGCTC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTCTTTCATCATCCTCTTCAGAGAGTTTTTGCATGTCCTGGCCTTCCCCTGGCGAGCCAGGAGCTGGATaGGGTCATAGAGAACATAAC +
Preference number: 4 (lower is better)
Translates to: SLSSSSSESFCMSWPSPGEPGAG*GHREHN
Trigger: GTTATGTTCTCTATGACCTCATCCAGCTCCTGGCTC...GCCAGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAGGATGATGAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATTCAAAATTGATCGATaGAAGAACAGAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVFKIDR*KNRARS
Trigger: GCTCCTGGCTCTGTTCTTTCATCGATCAATTTTGAA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGGAGAGCTCATCATCTaGTTCCTCCCTGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSGELII*FLPGHA
Trigger: GGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTGAGTCCCTCCTGCCATaGCCGAGGGAGAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLESLLP*PRESSS
Trigger: TGATGAGCTCTCCCTCGGTCATGGCAGGAGGGACTC...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGATATACTCCGGGTGGATaGGGTTGTAAAAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRYTPGG*GCKRTV
Trigger: AACAGTTCTTTTACAACCTCATCCACCCGGAGTATA...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTGGTTCCAAACTGAATaGGGACCATCACCAAAAACG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLWFQTE*GPSPKT
Trigger: CGTTTTTGGTGATGGTCCTCATTCAGTTTGGAACCA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTGGTTCCAAACTGAATaGGGACCATCACCAAAAACG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCWFQTE*GPSPKT
Trigger: CGTTTTTGGTGATGGTCCTCATTCAGTTTGGAACCA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCAACCAGGTTCTGGCTaGATTTCCTCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQQPGSG*ISSQSH
Trigger: GTGTGACTGAGAGGAAATTCAGCCAGAACCTGGTTG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGCCAACACTTCAGGATaGATATGTGAGCATAGATGT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVANTSG*ICEHRC
Trigger: ACATCTATGCTCACATATTCATCCTGAAGTGTTGGC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAACCAGTTCCAGGGCCTaGGAGTTCGGATTGTATATT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRTSSRA*EFGLYI
Trigger: AATATACAATCCGAACTCTCAGGCCCTGGAACTGGT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGACGGGGCCCATAAATaGTTCCTTCACATGATCAAT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEDGAHK*FLHMIN
Trigger: ATTGATCATGTGAAGGAATCATTTATGGGCCCCGTC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACGTCCCGTATGTCCTTaGATCGTCGTTTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRRPVCP*IVVFVG
Trigger: ACCAACAAAAACGACGATGCAAGGACATACGGGACG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGCGGGTTACTCTGTGCTaGTTCGTCTGTCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQRVTLC*FVCHRF
Trigger: AAACCTGTGACAGACGAAGCAGCACAGAGTAACCCG...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTAGTGGGGTAATGGGTTaGGTACCACAGGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSGVMG*VPQAPP
Trigger: AGGCGGAGCCTGTGGTACGCAACCCATTACCCCACT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCTTGCAGAGCTTTTTaGTCTGTGAGGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSCRAF*SVRCCL
Trigger: GAGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCGGTCAATCACCAGGTaGCATTTGTTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLRSITR*HLFLKS
Trigger: AGACTTAAGGAACAAATGGCACCTGGTGATTGACCG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCGGTCAATCACCAGGTaGCATTTGTTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCRSITR*HLFLKS
Trigger: AGACTTAAGGAACAAATGGCACCTGGTGATTGACCG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACGATGGCTTTCCTTCTaGGTCTATATAAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIERWLSF*VYIRQR
Trigger: TCGCTGTCTTATATAGACGCAGAAGGAAAGCCATCG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTCATCCTCAAAAATCTaGCGTTGTAAGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSSSKI*RCKEAH
Trigger: GTGTGCCTCCTTACAACGGCAGATTTTTGAGGATGA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATCATCCTCAAAAATCTaGCGTTGTAAGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESSSKI*RCKEAH
Trigger: GTGTGCCTCCTTACAACGGCAGATTTTTGAGGATGA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTCATCCTCAAAAATCTaGCGTTGTAAGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSSSKI*RCKEAH
Trigger: GTGTGCCTCCTTACAACGGCAGATTTTTGAGGATGA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACTCGACATTGTCACCTaGCATGATTCGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPLDIVT*HDSHCS
Trigger: GCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACCGCATCAAGGTTCATaGAGATCTCGACATTGTCAC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVPHQGS*RSRHCH
Trigger: GTGACAATGTCGAGATCTGCATGAACCTTGATGCGG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGATGAAAACTCTTCTTTaGAGCAGGAGGAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGEMKTLL*SRRKAK
Trigger: TTTTGCCTTCCTCCTGCTGCAAAGAAGAGTTTTCAT...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRSSESF*MSWPSP
Trigger: AGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSHTVLA*RVVLRA
Trigger: GGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTCAGGGGAGGTAAGATaGTGGACCCCAGCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSGEVR*WTPACR
Trigger: CCGACAAGCTGGGGTCCAGCATCTTACCTCCCCTGA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATGCTTCCTTTTTGACTaGTGTTTCGGGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVCFLFD*CFGCLC
Trigger: GCACAAGCACCCGAAACAGCAGTCAAAAAGGAAGCA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCACCCAGTCCATCACTaGCCTCAGCTCAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSHPVHH*PQLSQK
Trigger: TTTTTGACTGAGCTGAGGGCAGTGATGGACTGGGTG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTCGTGTATCATTTTCTaGTTACTGGGTGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSCIIF*LLGGLM
Trigger: CATCAGCCCACCCAGTAAGCAGAAAATGATACACGA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTCGTGTATCATTTTCTaGTTACTGGGTGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSCIIF*LLGGLM
Trigger: CATCAGCCCACCCAGTAAGCAGAAAATGATACACGA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCGCTTGATGCTAAACTaGCACTGTCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRLMLN*HCQLMR
Trigger: CCTCATCAGCTGACAGTGGCAGTTTAGCATCAAGCG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTAGGATAGGGTTGGCGTaGTGGTACCACGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSRIGLA*WYHDRS
Trigger: GGACCTGTCGTGGTACCACCACGCCAACCCTATCCT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGTTTTCTCTCATCAGTaGGGTAATGGGTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRVFSHQ*GNGLRT
Trigger: GGTACGCAACCCATTACCCCACTGATGAGAGAAAAC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACAGCAGAAAGGAGGTTaGGATGAATATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEQQKGG*DEYASE
Trigger: TTCACTCGCATATTCATCCCAACCTCCTTTCTGCTG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAATGCAGATGAAATACTaGAAGGTGATGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVMQMKY*KVMMHA
Trigger: GGCATGCATCATCACCTTCCAGTATTTCATCTGCAT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGCCAGGCTGAAAGCCTaGATCAACCAACAACTATTG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVARLKA*INQQLL
Trigger: CAATAGTTGTTGGTTGATCCAGGCTTTCAGCCTGGC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGGATTTCTTTTTGATTaGTTCATCCTCCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVGFLFD*FILPVF
Trigger: GAAGACCGGGAGGATGAACCAATCAAAAAGAAATCC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGATGCTCTCCCGAGTTaGAACATTGCCCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEDALPS*NIALLN
Trigger: ATTAAGAAGGGCAATGTTCCAACTCGGGAGAGCATC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRKLSIL*AVCAPE
Trigger: TTCAGGTGCACAGACAGCCCACAGGATGGATAGTTT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGACTGCGTGGGCTCGCTaGAGATACTGTCATGTGAAT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQTAWAR*RYCHVN
Trigger: ATTCACATGACAGTATCTCCAGCGAGCCCACGCAGT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACATCCCCGTCCAAGGTaGAGAACTGTGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTHPRPR*RTVSAL
Trigger: AAGAGCTGACACAGTTCTCCACCTTGGACGGGGATG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCTGGCCGTCAGCTCATaGGTCAGGGGAGGTAAGATG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLAVSS*VRGGKM
Trigger: CATCTTACCTCCCCTGACCCATGAGCTGACGGCCAG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCACTCCTATGATGTTTaGGGGGTGATACGGTTTATC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLHSYDV*GVIRFI
Trigger: GATAAACCGTATCACCCCCCAAACATCATAGGAGTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGCATCTGATTCCTCCCTaGCCATGCCACTTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLHLIPP*PCHFQS
Trigger: TGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATG...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCAACGGCCCCGGGACCTaGTCCTCTGACAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGNGPGT*SSDSEE
Trigger: CTCTTCACTGTCAGAGGACCAGGTCCCGGGGCCGTT...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAACACAAGAATGACCTaGAAGATGACCTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVNTRMT*KMTFPS
Trigger: ACTGGGAAAGGTCATCTTCCAGGTCATTCTTGTGTT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTGGGCAACCAGGTTCTaGCTGAATTTCCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSWATRF*LNFLSV
Trigger: GACTGAGAGGAAATTCAGCCAGAACCTGGTTGCCCA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACAAAGTACCAAAGCTaGGCAACCAGGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQETKYQS*ATRFWL
Trigger: CAGCCAGAACCTGGTTGCCCAGCTTTGGTACTTTGT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGAAGCTGGTCACTGGTaGACCATAACAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQEAGHW*TITKQV
Trigger: CACCTGCTTTGTTATGGTCCACCAGTGACCAGCTTC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCACCATCTCCTCCATTaGAATCCTCTTCATAGATCA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLHHLLH*NPLHRS
Trigger: TGATCTATGAAGAGGATTTCAATGGAGGAGATGGTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAGTCCGTTTGAATTACTaGCTTGATACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVVRLNY*LDTKQP
Trigger: AGGTTGTTTGGTATCAAGTCAGTAATTCAAACGGAC...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGGTCCGGGTTCACTATaGTCTTCCAAGTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEGPGSL*SSKYLN
Trigger: GTTCAAGTACTTGGAAGATCATAGTGAACCCGGACC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGGAGCTTTTTGCTCTGTaGGGTGCTGCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLELFAL*GAASAV
Trigger: TACTGCTGAGGCAGCACCTCACAGAGCAAAAAGCTC...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSDASW*GPGGFL
Trigger: AAGGAAGCCTCCCGGACCTCACCATGATGCATCTGA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACTCTCCGTCCTCCTCTaGCTCCTCGCTGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLSVLL*LLAVFP
Trigger: GGGAAAGACAGCGAGGAGTCAGAGGAGGACGGAGAG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAACTCTCCGTCCTCCTCTaGCTCCTCGCTGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKLSVLL*LLAVFP
Trigger: GGGAAAGACAGCGAGGAGTCAGAGGAGGACGGAGAG...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGGTTGGGCCGCACAATaGAATCTGGGAAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSGWAAQ*NLGSTA
Trigger: GGCTGTACTTCCCAGATTTCATTGTGCGGCCCAACC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACACACAGAAGCAGCATaGAGTCATAGACGAGAAACA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRHTEAA*SHRRET
Trigger: TGTTTCTCGTCTATGACTTCATGCTGCTTCTGTGTG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAGCGCAGGATGCTCTTaGTGGGTTTCAACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESAGCS*WVSTAN
Trigger: ATTTGCTGTTGAAACCCATCAAGAGCATCCTGCGCT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTTCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVSVAWP*CDPSVA
Trigger: AGCGACAGATGGATCGCATCAAGGCCAGGCAACAGA...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAATAATCTCCACTCCTaGCCATGGAAGCATGATCAA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIENNLHS*PWKHDQ
Trigger: TTGATCATGCTTCCATGGTCAGGAGTGGAGATTATT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAATCAATATGCTCCCTTaGAATGGAGTTAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRINMLP*NGVKPS
Trigger: ACTTGGCTTAACTCCATTTCAAGGGAGCATATTGAT...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATCAAGCTCATCGTCGTaGAACATCTTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSSSSS*NIFFSS
Trigger: GCTGCTGAAAAAGATGTTTCACGACGATGAGCTTGA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTGGCCCAGAGGAAGATaGGGATGGGAAGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPWPRGR*GWEAGA
Trigger: CGCTCCTGCTTCCCATCCTCATCTTCCTCTGGGCCA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCTTCAAAATTGATCGATaGAAGAACAGAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEIFKIDR*KNRARS
Trigger: GCTCCTGGCTCTGTTCTTTCATCGATCAATTTTGAA...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTCTTTGGGATCTGTTTaGAGAAAAGCTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSLGSV*RKAGSL
Trigger: CAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTCTTTGGGATCTGTTTaGAGAAAAGCTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSLGSV*RKAGSL
Trigger: CAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATGTAAAAGAACTGTTTaGTGGGCACATAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVCKRTV*WAHRSP
Trigger: TGGAGATCTATGTGCCCATCAAACAGTTCTTTTACA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGATGTCTGCAGCTGCTaGGTGTTTCCCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSDVCSC*VFPKGP
Trigger: TGGGCCTTTGGGAAACACTCAGCAGCTGCAGACATC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATGGTTCCAAACTGAATaGGGACCATCACCAAAAACG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVWFQTE*GPSPKT
Trigger: CGTTTTTGGTGATGGTCCTCATTCAGTTTGGAACCA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAAGAACATCCAGAAGTaGATTCCGAACACAAGAATG +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVKNIQK*IPNTRM
Trigger: CATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTCACACCAGGTAAGATaGAGAACATCCAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSHQVR*RTSRSE
Trigger: TTCACTTCTGGATGTTCTTCATCTTACCTGGTGTGA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATCACACCAGGTAAGATaGAGAACATCCAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESHQVR*RTSRSE
Trigger: TTCACTTCTGGATGTTCTTCATCTTACCTGGTGTGA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACAACCAGGTTCTGGCTaGATTTCCTCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTQPGSG*ISSQSH
Trigger: GTGTGACTGAGAGGAAATTCAGCCAGAACCTGGTTG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGGAATAAGAAGAGGTTaGCGTAATTGTAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLGIRRG*RNCSSW
Trigger: CCAAGAGCTACAATTACGTCAACCTCTTCTTATTCC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGCCAACACTTCAGGATaGATATGTGAGCATAGATGT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCANTSG*ICEHRC
Trigger: ACATCTATGCTCACATATTCATCCTGAAGTGTTGGC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGCCAACACTTCAGGATaGATATGTGAGCATAGATGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEANTSG*ICEHRC
Trigger: ACATCTATGCTCACATATTCATCCTGAAGTGTTGGC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGCTTACTGGGTGGGCTaGTGGTCCACAAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTAYWVG*WSTKNL
Trigger: CAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGTTGCTTTATAGGTTTTaGGTTAGAATCACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: VDGLERIGGVPPAMTEGELLYRF*VRITRC
Trigger: GCACCTAGTGATTCTAACTCAAAACCTATAAAGCAA...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAGTGAGAAATCCCACTaGAGAATTCACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSEKSH*RIHGQI
Trigger: AATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGATCAAACATGATGGAGTaGGAAATCCCACTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRSNMME*EIPLKN
Trigger: ATTCTTCAGTGGGATTTCTCACTCCATCATGTTTGA...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGAAGCTCTTCAAACATaGTGGAGTGAGAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSREALQT*WSEKSH
Trigger: GTGGGATTTCTCACTCCATCATGTTTGAAGAGCTTC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGACGGGGCCCATAAATaGTTCCTTCACATGATCAAT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRDGAHK*FLHMIN
Trigger: ATTGATCATGTGAAGGAATCATTTATGGGCCCCGTC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGCAGAAGAGCGGTCCTaGCCTCAGTTATTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSAEERS*PQLLKS
Trigger: ACTCTTTAATAACTGAGGTCAGGACCGCTCTTCTGC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGATATACGCGACCATTaGCTTTGGCATGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQDIRDH*LWHGCR
Trigger: TCTACAGCCATGCCAAAGTCAATGGTCGCGTATATC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAAAAGTTCAGCCACCTTaGTGCCAGAATCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPKVQPP*CQNLGS
Trigger: GCTTCCCAGATTCTGGCATCAAGGTGGCTGAACTTT...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGAATGCACATGCTACTaGCAGGCAGATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSECTCY*QADGQQ
Trigger: CTGCTGCCCATCTGCCTGGCAGTAGCATGTGCATTC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGCAGTTGTAGCCAGGTaGAATACGATGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEAVVAR*NTMLSF
Trigger: GAAGCTCAACATCGTATTGCACCTGGCTACAACTGC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGGCAGTTGTAGCCAGGTaGAATACGATGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQAVVAR*NTMLSF
Trigger: GAAGCTCAACATCGTATTGCACCTGGCTACAACTGC...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGACCAGGACCACCAGGTaGACAGACCCAAAAATACAA +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELTRTTR*TDPKIQ
Trigger: TTGTATTTTTGGGTCTGTGCACCTGGTGGTCCTGGT...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGTCATTGGGTGGAACTaGCTCTTGAAAGAATTGGAA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCVIGWN*LLKELE
Trigger: TTCCAATTCTTTCAAGAGGCAGTTCCACCCAATGAC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTAGTGGGGTAATGGGTTaGGTACCACAGGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLSGVMG*VPQAPP
Trigger: AGGCGGAGCCTGTGGTACGCAACCCATTACCCCACT...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGAATCATCCAAAGAGTaGACGACCAGATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEESSKE*TTRSAA
Trigger: TGCTGCTGATCTGGTCGTGCACTCTTTGGATGATTC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGCTCTGTGAGGTGCTaGCTCAGCAGTAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTCSVRC*LSSSQK
Trigger: TTTTTGGCTACTGCTGAGGCAGCACCTCACAGAGCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTTTTTGCTCTGTGAGGTaGTGCCTCAGCAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFFCSVR*CLSSSQ
Trigger: TTGGCTACTGCTGAGGCAGCACCTCACAGAGCAAAA...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATTTTGCTCTGTGAGGTaGTGCCTCAGCAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTFCSVR*CLSSSQ
Trigger: TTGGCTACTGCTGAGGCAGCACCTCACAGAGCAAAA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCATCTTGCAGAGCTTTTTaGTCTGTGAGGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPSCRAF*SVRCCL
Trigger: GAGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGA...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACTTTCATGATGTCCTaGTCATCTTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTFMMS*SSSSSA
Trigger: AGCTGAAGAAGAAGATGAGCAGGACATCATGAAAGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAGTCCAGTCATATTTTaGCACAGGCCTGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSPVIF*HRPGKF
Trigger: GAACTTCCCAGGCCTGTGGCAAAATATGACTGGACT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTCAGCCACAGTAAACTaGTTTAAGCCAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLSATVN*FKPRSS
Trigger: TGAGGATCTTGGCTTAAAGCAGTTTACTGTGGCTGA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACGATTTTGATGATGTaGAACTCCAAAATCCACCAC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTILMM*NSKIHH
Trigger: GTGGTGGATTTTGGAGTTGCACATCATCAAAATCGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCCGCATCAAGGTTCATaGAGATCTCGACATTGTCAC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEPHQGS*RSRHCH
Trigger: GTGACAATGTCGAGATCTGCATGAACCTTGATGCGG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACACAAAAACGTTGTATaGGATCAGCCAGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVHKNVV*DQPVPV
Trigger: TACTGGGACTGGCTGATCGCATACAACGTTTTTGTG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGTCCCAAATGATTCCTaGTTCCCCACTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTVPNDS*FPTGKC
Trigger: ACACTTCCCAGTGGGGAAGCAGGAATCATTTGGGAC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATTTCTCTGGTCAGCATaGATCGTTCAATTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVFLWSA*IVQFSE
Trigger: TTCTGAGAATTGAACGATGCATGCTGACCAGAGAAA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGATAGTACATGTGGATaGTCTCCCGAGTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRDSTCG*SPELEH
Trigger: ATGTTCCAACTCGGGAGAGCATCCACATGTACTATC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTAGGCGCCGTGCTCCCTaGCTCCTCCTCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNIRRRAP*LLLLLS
Trigger: GCTGAGCAGGAGGAGGAGGCAGGGAGCACGGCGCCT...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACCTGCAGAGTCGTCCTaGGAGCCGAAGGACAGATGC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRPAESS*EPKDRC
Trigger: GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGATTCCTCCCTGGCCATaGCACTTTCAGTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQIPPWP*HFQSCH
Trigger: ATGACATGACTGAAAGTGGCATGGCCAGGGAGGAAT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTGCTTCCTTTTTGACTaGTGTTTCGGGTGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQCFLFD*CFGCLC
Trigger: GCACAAGCACCCGAAACAGCAGTCAAAAAGGAAGCA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTCACCAACGTGATGTaGAAAATGATGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLTNVM*KMMCSN
Trigger: GTTGCTGCACATCATTTTCCACATCACGTTGGTGAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTACAGCTGAACAGCAATaGGTCGAACGTCCGGCACCA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSTAEQQ*VERPAP
Trigger: TGGTGCCGGACGTTCGACCCATTGCTGTTCAGCTGT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTGCATAGTAGTCATTaGGTGGAACTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCLHSSH*VELPLE
Trigger: TTCAAGAGGCAGTTCCACCCAATGACTACTATGCAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATAGGGTTGGCGTGGTaGTACCACGACAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPIGLAW*YHDRSG
Trigger: CCCGGACCTGTCGTGGTACCACCACGCCAACCCTAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGTTTTCTCTCATCAGTaGGGTAATGGGTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEVFSHQ*GNGLRT
Trigger: GGTACGCAACCCATTACCCCACTGATGAGAGAAAAC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCTCCATGGGCAGGCTTaGGTGGATGGTGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLHGQA*VDGVVI
Trigger: GATTACCACACCATCCACCCAAGCCTGCCCATGGAG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGATTTTGCCACAGGCCTaGGAAGTTCTCAAACTGATA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLILPQA*EVLKLI
Trigger: TATCAGTTTGAGAACTTCCCAGGCCTGTGGCAAAAT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCCGCACAATGAAATCTaGGAAGTACAGCCACTTTAT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCPHNEI*EVQPLY
Trigger: ATAAAGTGGCTGTACTTCCCAGATTTCATTGTGCGG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGGCCAGGCTGAAAGCCTaGATCAACCAACAACTATTG +
Preference number: 4 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQARLKA*INQQLL
Trigger: CAATAGTTGTTGGTTGATCCAGGCTTTCAGCCTGGC...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTTGATGCCAGAATCTaGGAAGCTTTTATATCAGCC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLDARI*EAFISA
Trigger: GGCTGATATAAAAGCTTCCCAGATTCTGGCATCAAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACAGCTTTTACAATTGTaGCCTGGAAAAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEQLLQL*PGKVQL
Trigger: GAGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCAGCTTTTACAATTGTaGCCTGGAAAAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLQLLQL*PGKVQL
Trigger: GAGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGCTTCAGCTGGTCCATaGACTTCTTCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSASAGP*TSSLPQ
Trigger: TTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEICRFS*SMDFFS
Trigger: AGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGAT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSICRFS*SMDFFS
Trigger: AGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGAT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQICRFS*SMDFFS
Trigger: AGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGAT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCACAGTTTACTTGTGACTTGATAGAAATAGGCATTTGTGCACTGCATTTACCAGTCCTGGCCTTCCCCTaGCTCCTGGGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQFTCDLIEIGICALHLPVLAFP*LLGQAQ
Trigger: CTGAGCTTGACCCAGGAGCCAGGGGAAGGCCAGGAC...TGGTAAATGCAGTGCACAAATGCCTATTTCTATCAAGTCACAAGTAAACTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGATGCTCTCCCGAGTTaGAACATTGCCCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVDALPS*NIALLN
Trigger: ATTAAGAAGGGCAATGTTCCAACTCGGGAGAGCATC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEKLSIL*AVCAPE
Trigger: TTCAGGTGCACAGACAGCCCACAGGATGGATAGTTT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELKLSIL*AVCAPE
Trigger: TTCAGGTGCACAGACAGCCCACAGGATGGATAGTTT...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQKLSIL*AVCAPE
Trigger: TTCAGGTGCACAGACAGCCCACAGGATGGATAGTTT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPGVSTA*YTAWAR
Trigger: GCGAGCCCACGCAGTGTACCATGCTGTACTCACGCC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACACTCCTATGATGTTTaGGGGGTGATACGGTTTATC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRHSYDV*GVIRFI
Trigger: GATAAACCGTATCACCCCCCAAACATCATAGGAGTG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGTGTTTGAAGAAAAGCTaGATCTCTGGGATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLCLKKS*ISGMAR
Trigger: CCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACA...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAACGGCCCCGGGACCTaGTCCTCTGACAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPNGPGT*SSDSEE
Trigger: CTCTTCACTGTCAGAGGACCAGGTCCCGGGGCCGTT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAACACAAGAATGACCTaGAAGATGACCTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIENTRMT*KMTFPS
Trigger: ACTGGGAAAGGTCATCTTCCAGGTCATTCTTGTGTT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTACGAGGCGAAACCCTTaGAATAAGAAGAGGTTGACG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSTRRNP*NKKRLT
Trigger: CGTCAACCTCTTCTTATTCCAAGGGTTTCGCCTCGT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCAGAGAAGCTACTATTaGGGTCCAGGAGTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSQRSYY*GPGVRV
Trigger: TACACGAACTCCTGGACCCCAATAGTAGCTTCTCTG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTLPQWG*SAVYCI
Trigger: AATGCAATATACAGCGCTCCATCCCCACTGGGGAAG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGAAGCTGGTCACTGGTaGACCATAACAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTEAGHW*TITKQV
Trigger: CACCTGCTTTGTTATGGTCCACCAGTGACCAGCTTC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGAACGGCGCGAGCGTaGGGAGAAATGGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGTARA*GEMETR
Trigger: TCTGGTCTCCATTTCTCCCCACGCTCGCGCCGTTCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
3UTR CAA 72 bp CTCTCCTTACCCTTTTTATATTTCTGTTGCCTGGCCTaGATGCGATCCATCTGTCGCTTCAGCTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: LSLPFLYFCCLA*MRSICRFSWSM
Trigger: CATGGACCAGCTGAAGCGACAGATGGATCGCATCAAGGCCAGGCAACAGAAATATAAAAAGGGTAAGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 72 bp GCTCAGCATCCTCTCCTTACCCTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATCCATCTGTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: AQHPLLTLFIFL*PGLDAIHLSLQ
Trigger: CTGAAGCGACAGATGGATCGCATCAAGGCCAGGCAACAGAAATATAAAAAGGGTAAGGAGAGGATGCTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 72 bp AATCATCAAGGGTGGACTGCCTTGAGAACAGCATGGTaGCTTCAGTGTAGCAGCTGGAGATACTGTCATGTG +
Preference number: 4 (lower is better)
Translates to: NHQGWTALRTAW*LQCSSWRYCHV
Trigger: CACATGACAGTATCTCCAGCTGCTACACTGAAGCAACCATGCTGTTCTCAAGGCAGTCCACCCTTGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATCTGTCACAGGTTTCTaGACAATGTTTCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRSVTGF*TMFLQR
Trigger: CCTCTGTAGAAACATTGTTCAGAAACCTGTGACAGA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGATCTTCCAAGTACTTaGACAGTCCGTTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCDLPST*TVRLNY
Trigger: GTAATTCAAACGGACTGTTCAAGTACTTGGAAGATC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGAGCTTTTTGCTCTGTaGGGTGCTGCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSELFAL*GAASAV
Trigger: TACTGCTGAGGCAGCACCTCACAGAGCAAAAAGCTC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTAAGAAGAGCACAGTaGGGCGGTCAATCACCAGGT +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLLRRAQ*GGQSPG
Trigger: ACCTGGTGATTGACCGCCTCACTGTGCTCTTCTTAA...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAACACCTGCAGCTTGTaGAAATACTCCAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLNTCSL*KYSRNF
Trigger: AAAATTCCTGGAGTATTTTCACAAGCTGCAGGTGTT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACCAAAATCCACCACATaGACACCTGCAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTPKSTT*TPAACE
Trigger: TTCACAAGCTGCAGGTGTTCATGTGGTGGATTTTGG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCATTGTCACCTGCCATaGTTCGCACTGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSHCHLP*FALQPC
Trigger: ACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATCCACATGCTCCTATTaGCAGGATATTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESTCSY*QDIFHR
Trigger: ACGATGAAAAATATCCTGTCAATAGGAGCATGTGGA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTTCTGTTGCCTGGCCTTaGTGCGATCCATCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: FMIRRETHCILCGYQDLLSVAWP*CDPSVA
Trigger: AGCGACAGATGGATCGCATCAAGGCCAGGCAACAGA...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAATAATCTCCACTCCTaGCCATGGAAGCATGATCAA +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVNNLHS*PWKHDQ
Trigger: TTGATCATGCTTCCATGGTCAGGAGTGGAGATTATT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCATCGGATTTCTTTTTaGTTGGTTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEHRISF*LVHPPG
Trigger: ACCGGGAGGATGAACCAATCAAAAAGAAATCCGATG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGATCAATATGCTCCCTTaGAATGGAGTTAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLINMLP*NGVKPS
Trigger: ACTTGGCTTAACTCCATTTCAAGGGAGCATATTGAT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTCTGGAAAGGTTCATaGTGTGGTTCTGATAGTACA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLWKGS*CGSDST
Trigger: TGTACTATCAGAACCACATCATGAACCTTTCCAGAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTCAAGCTCATCGTCGTaGAACATCTTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESSSSS*NIFFSS
Trigger: GCTGCTGAAAAAGATGTTTCACGACGATGAGCTTGA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATGGCACTTCAAAATTaGTCGATGAAAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCMALQN*SMKEQS
Trigger: GCTCTGTTCTTTCATCGATCAATTTTGAAGTGCCAT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGGAGAGCTCATCATCTaGTTCCTCCCTGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPGELII*FLPGHA
Trigger: GGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAACACTGCTTCCTTTTTaGCTGCTGTTTCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTTLLPF*LLFRVL
Trigger: AAGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTGTAAAAGAACTGTTTaGTGGGCACATAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLCKRTV*WAHRSP
Trigger: TGGAGATCTATGTGCCCATCAAACAGTTCTTTTACA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTGGTTCCAAACTGAATaGGGACCATCACCAAAAACG +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPWFQTE*GPSPKT
Trigger: CGTTTTTGGTGATGGTCCTCATTCAGTTTGGAACCA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCTCTGAATACTCCATaGAAAAACAACAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSLNTP*KNNREA
Trigger: AGCTTCTCTGTTGTTTTTTCATGGAGTATTCAGAGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAGTGAGAAATCCCACTaGAGAATTCACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSEKSH*RIHGQI
Trigger: AATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCCCCATTGTATCGGAATaGACATGCTACTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLPIVSE*TCYCQA
Trigger: TGCCTGGCAGTAGCATGTGCATTCCGATACAATGGG...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACATTTTTAACTTCGTaGTTTCTTCCAACTCGCCTT +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTFLTS*FLPTRL
Trigger: AAGGCGAGTTGGAAGAAAGCACGAAGTTAAAAATGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGTCATTGGGTGGAACTaGCTCTTGAAAGAATTGGAA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRVIGWN*LLKELE
Trigger: TTCCAATTCTTTCAAGAGGCAGTTCCACCCAATGAC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGATACCAAACAACCTTaGATAGTAGTCATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRDTKQP*IVVIGW
Trigger: CCACCCAATGACTACTATGCAAGGTTGTTTGGTATC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAAGTGGGGTAATGGGTTaGGTACCACAGGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSGVMG*VPQAPP
Trigger: AGGCGGAGCCTGTGGTACGCAACCCATTACCCCACT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAGTAGAGGTCGGCTTTaGCAGGGCCGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSRGRL*QGRSPW
Trigger: CCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAACTTTCATGATGTCCTaGTCATCTTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GYCTWHRRAAEIGAAPRRTFMMS*SSSSSA
Trigger: AGCTGAAGAAGAAGATGAGCAGGACATCATGAAAGT...TCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAATACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAGTGCAGGTGTAAAATaGACACCAGCAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSAGVK*TPAERR
Trigger: CCTCCTTTCTGCTGGTGTGCATTTTACACCTGCACT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGCGGTCAATCACCAGGTaGCATTTGTTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELRSITR*HLFLKS
Trigger: AGACTTAAGGAACAAATGGCACCTGGTGATTGACCG...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAACGATTTTGATGATGTaGAACTCCAAAATCCACCAC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIETILMM*NSKIHH
Trigger: GTGGTGGATTTTGGAGTTGCACATCATCAAAATCGT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTCCGCATCAAGGTTCATaGAGATCTCGACATTGTCAC +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFPHQGS*RSRHCH
Trigger: GTGACAATGTCGAGATCTGCATGAACCTTGATGCGG...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTTCTCTGGTCAGCATaGATCGTTCAATTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCFLWSA*IVQFSE
Trigger: TTCTGAGAATTGAACGATGCATGCTGACCAGAGAAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGATAGTACATGTGGATaGTCTCCCGAGTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEDSTCG*SPELEH
Trigger: ATGTTCCAACTCGGGAGAGCATCCACATGTACTATC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAGAAAGCTTATCTGTTaGTATTTCCGATTTTGCACC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVRKLIC*YFRFCT
Trigger: GGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACATCTCTCCAGGAAGTaGACGGGCCCCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRHLSRK*TGPTEE
Trigger: TTCCTCTGTGGGGCCCGTGCACTTCCTGGAGAGATG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCAGGTAGGAGCTGTCTaGCCCCTATTGCTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSQVGAV*PLLLLH
Trigger: ATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGTCTTTTTACTCTTCTaGCTCATGTCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLVFLLF*LMSVCT
Trigger: TGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGAC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGAACAGAGACACCCTTaGCTCTTTCACAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTEQRHP*LFHRNP
Trigger: TGGGTTTCTGTGAAAGAGGCAAGGGTGTCTCTGTTC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383408.6
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCTCACCAACGTGATGTaGAAAATGATGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQLTNVM*KMMCSN
Trigger: GTTGCTGCACATCATTTTCCACATCACGTTGGTGAG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTCTCCCCGCTGTTATTTaGATGGGGCTACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLLPAVI*MGLQAR
Trigger: CCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAG...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATTTTGCCACAGGCCTaGGAAGTTCTCAAACTGATA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRILPQA*EVLKLI
Trigger: TATCAGTTTGAGAACTTCCCAGGCCTGTGGCAAAAT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCAGCAGAAAGGAGGTTaGGATGAATATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSQQKGG*DEYASE
Trigger: TTCACTCGCATATTCATCCCAACCTCCTTTCTGCTG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTAATGGTTTGGAGCTaGTACAACATTTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCLMVWS*YNILQT
Trigger: CGTCTGCAAAATGTTGTACCAGCTCCAAACCATTAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAGCAGGCGTGGATCATaGCATAGAAATCCATTCGCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSRRGS*HRNPFA
Trigger: AGCGAATGGATTTCTATGCCATGATCCACGCCTGCT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCGGAAGCAGCAGTACTTaGGCCAGATCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGGSSST*ARSLRW
Trigger: CCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCC...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACCGCACAATGAAATCTaGGAAGTACAGCCACTTTAT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVPHNEI*EVQPLY
Trigger: ATAAAGTGGCTGTACTTCCCAGATTTCATTGTGCGG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGCCAGGCTGAAAGCCTaGATCAACCAACAACTATTG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTARLKA*INQQLL
Trigger: CAATAGTTGTTGGTTGATCCAGGCTTTCAGCCTGGC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTGCTTCAGCTGGTCCATaGACTTCTTCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFASAGP*TSSLPQ
Trigger: TTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGC...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPICRFS*SMDFFS
Trigger: AGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGAT...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGATGCTCTCCCGAGTTaGAACATTGCCCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQDALPS*NIALLN
Trigger: ATTAAGAAGGGCAATGTTCCAACTCGGGAGAGCATC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTGGCCTCGTACTCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNIWPRTP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCA...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCCTCAGTATAGACGATaGCCATCATCCAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSPQYRR*PSSRTG
Trigger: GCCGGTTCTGGATGATGGCCATCGTCTATACTGAGG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATCATCCCATAAGCCATaGCACTTCAAAATTGATCGA +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESSHKP*HFKIDR
Trigger: TCGATCAATTTTGAAGTGCCATGGCTTATGGGATGA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTCATCCCATAAGCCATaGCACTTCAAAATTGATCGA +
Preference number: 4 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCSSHKP*HFKIDR
Trigger: TCGATCAATTTTGAAGTGCCATGGCTTATGGGATGA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTTGTGCTGCCTCTTTaGGATCTGTTTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLVLPL*DLFEEK
Trigger: CTTTTCTTCAAACAGATCCCAAAGAGGCAGCACAAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAACACAAGAATGACCTaGAAGATGACCTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVNTRMT*KMTFPS
Trigger: ACTGGGAAAGGTCATCTTCCAGGTCATTCTTGTGTT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACAGAGAAGCTACTATTaGGGTCCAGGAGTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPQRSYY*GPGVRV
Trigger: TACACGAACTCCTGGACCCCAATAGTAGCTTCTCTG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGATTGAAGCTGGTCACTaGTGGACCATAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQIEAGH*WTITKQ
Trigger: CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAAT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTATTCTAGGTCCCACTaGGTTGGTCTTTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLYSRSH*VGLFTL
Trigger: AAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTTCAGTGTAGCAGCTaGAGATACTGTCATGTGAAT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLQCSS*RYCHVN
Trigger: ATTCACATGACAGTATCTCCAGCTGCTACACTGAAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGCATGGTACACTGCGTaGGCTCGCTTGATGCTAAAC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSAWYTA*ARLMLN
Trigger: GTTTAGCATCAAGCGAGCCCACGCAGTGTACCATGC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCGTTTTTGTTGGTTCTaGGAACAGAGGAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRFCWF*EQRNEQ
Trigger: TTGCTCATTCCTCTGTTCTCAGAACCAACAAAAACG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCTGTCACAGGTTTCTaGACAATGTTTCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSVTGF*TMFLQR
Trigger: CCTCTGTAGAAACATTGTTCAGAAACCTGTGACAGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTCTGTCACAGGTTTCTaGACAATGTTTCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPSVTGF*TMFLQR
Trigger: CCTCTGTAGAAACATTGTTCAGAAACCTGTGACAGA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGCACCATCTCCTCCATTaGAATCCTCTTCATAGATCA +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELHHLLH*NPLHRS
Trigger: TGATCTATGAAGAGGATTTCAATGGAGGAGATGGTG...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTTGAACAGTCCGTTTaGATTACTGACTTGATACCA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLEQSV*ITDLIP
Trigger: TGGTATCAAGTCAGTAATTCAAACGGACTGTTCAAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCCTGACTGCCAATTTTaGCTTCCGATAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQPDCQF*LPIKEL
Trigger: AAGCTCTTTTATCGGAAGTCAAAATTGGCAGTCAGG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCCTGACTGCCAATTTTaGCTTCCGATAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEPDCQF*LPIKEL
Trigger: AAGCTCTTTTATCGGAAGTCAAAATTGGCAGTCAGG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTGGGAAGTGTACAGGGTaGATTAGCAGCAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVGKCTG*ISSRHL
Trigger: CAAATGCCTGCTGCTAATTCACCCTGTACACTTCCC...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTAAGTTCAGCTCCTCTTaGTGCCAGAATCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSKFSSS*CQNLGS
Trigger: GCTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAATAATCTCCACTCCTaGCCATGGAAGCATGATCAA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSNNLHS*PWKHDQ
Trigger: TTGATCATGCTTCCATGGTCAGGAGTGGAGATTATT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGAACAAACTGGAATGCTaGCCTTCGTGGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLNKLEC*PSWRFF
Trigger: GAAGAACCTCCACGAAGGTCAGCATTCCAGTTTGTT...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACATCGGATTTCTTTTTaGTTGGTTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPHRISF*LVHPPG
Trigger: ACCGGGAGGATGAACCAATCAAAAAGAAATCCGATG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTCTGGAAAGGTTCATaGTGTGGTTCTGATAGTACA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLWKGS*CGSDST
Trigger: TGTACTATCAGAACCACATCATGAACCTTTCCAGAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTCACGTAGAATTTCTCTaGCTCTTCAAGCTCATCGTC +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFHVEFL*LFKLIV
Trigger: GACGATGAGCTTGAAGAGTCAGAGAAATTCTACGTG...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAATTGGAAGAAATACTTaGCTACAATTGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVIGRNT*LQLPPQ
Trigger: CTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAAT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGAGCCAGGAGCTGGATaGGGTCATAGAGAACATAAC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSEPGAG*GHREHN
Trigger: GTTATGTTCTCTATGACCTCATCCAGCTCCTGGCTC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCTTTGGGATCTGTTTaGAGAAAAGCTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSLGSV*RKAGSL
Trigger: CAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTATACTCCGGGTGGATaGGGTTGTAAAAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEYTPGG*GCKRTV
Trigger: AACAGTTCTTTTACAACCTCATCCACCCGGAGTATA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAACCATGGTTCCAAACTaGATGAGGACCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTTMVPN*MRTITK
Trigger: TTTGGTGATGGTCCTCATTCAGTTTGGAACCATGGT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCAACCAGGTTCTGGCTaGATTTCCTCTCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSQPGSG*ISSQSH
Trigger: GTGTGACTGAGAGGAAATTCAGCCAGAACCTGGTTG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTTGTTTCCAGTCAGGTTaGGAACCCACCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVCFQSG*EPTTHC
Trigger: ACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACA...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATCAAACATGATGGAGTaGGAAATCCCACTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSNMME*EIPLKN
Trigger: ATTCTTCAGTGGGATTTCTCACTCCATCATGTTTGA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGAAGCTCTTCAAACATaGTGGAGTGAGAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTEALQT*WSEKSH
Trigger: GTGGGATTTCTCACTCCATCATGTTTGAAGAGCTTC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAATGATTCCTTCACATaGTCAATCAGAATGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRNDSFT*SIRMRD
Trigger: GTCTCGCATTCTGATTGATCATGTGAAGGAATCATT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCACAGTTTACTTGTGACTTGATAGAAATAGGCATTTGTGCACTGCATTTACCACTCAGATGGCGAACCTaGCTCCAGCCTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: AQFTCDLIEIGICALHLPLRWRT*LQPVST
Trigger: TGTGGACACAGGCTGGAGTCAGGTTCGCCATCTGAG...TGGTAAATGCAGTGCACAAATGCCTATTTCTATCAAGTCACAAGTAAACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGAATGCACATGCTACTaGCAGGCAGATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRECTCY*QADGQQ
Trigger: CTGCTGCCCATCTGCCTGGCAGTAGCATGTGCATTC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACTCCGGGTTACTCTGTaGTGCTTCGTCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLRVTL*CFVCHR
Trigger: CCTGTGACAGACGAAGCAGCACAGAGTAACCCGGAG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACATTTTTAACTTCGTaGTTTCTTCCAACTCGCCTT +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTFLTS*FLPTRL
Trigger: AAGGCGAGTTGGAAGAAAGCACGAAGTTAAAAATGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAACATTTTTAACTTCGTaGTTTCTTCCAACTCGCCTT +
Preference number: 4 (lower is better)
Translates to: GYCTWHRRAAEIGAAPRRTFLTS*FLPTRL
Trigger: AAGGCGAGTTGGAAGAAAGCACGAAGTTAAAAATGT...TCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGTCATTGGGTGGAACTaGCTCTTGAAAGAATTGGAA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQVIGWN*LLKELE
Trigger: TTCCAATTCTTTCAAGAGGCAGTTCCACCCAATGAC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGTAATCCACGGGGTTaGCGTTCACAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGNPRG*RSQSPA
Trigger: TGCTGGTGACTGTGAACGGCAACCCCGTGGATTACC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACATATTTTCTTCTGTTaGGAATCATCCAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEHIFFC*ESSKEC
Trigger: GCACTCTTTGGATGATTCGCAACAGAAGAAAATATG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGAGAGCTTCCTTTTCTTaGAGAGCTTTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLRASFS*RAFCSV
Trigger: CACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCT...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGAGCTTCCTTTTCTTaGAGAGCTTTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRASFS*RAFCSV
Trigger: CACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAACTTTCATGATGTCCTaGTCATCTTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRTFMMS*SSSSSA
Trigger: AGCTGAAGAAGAAGATGAGCAGGACATCATGAAAGT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAACTTTCATGATGTCCTaGTCATCTTCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVTFMMS*SSSSSA
Trigger: AGCTGAAGAAGAAGATGAGCAGGACATCATGAAAGT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCAGCCACAGTAAACTaGTTTAAGCCAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSATVN*FKPRSS
Trigger: TGAGGATCTTGGCTTAAAGCAGTTTACTGTGGCTGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACGATGGCTTTCCTTCTaGGTCTATATAAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTRWLSF*VYIRQR
Trigger: TCGCTGTCTTATATAGACGCAGAAGGAAAGCCATCG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLRSSQP*CRRVGP
Trigger: AGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCCTGCAGAGTCGTCCTaGGAGCCGAAGGACAGATGC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLPAESS*EPKDRC
Trigger: GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGTCGTCCGGGCTGACTaGCATACGGTTCTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLVVRAD*HTVLAC
Trigger: GCAGGCAAGAACCGTATGGCAGTCAGCCCGGACGAC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCGGACAGCTGTCTGCTaGTCCGGGAAGGTCACATGC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLRTAVC*SGKVTC
Trigger: GCATGTGACCTTCCCGGAGCAGCAGACAGCTGTCCG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGACTGCTGTTTCGGGTaGTTGTGCTGCCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRDCCFG*LCCLFG
Trigger: CCCAAAGAGGCAGCACAAGCACCCGAAACAGCAGTC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAATTTGTTAAAGCTCTaGTGGTCCATAACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVNLLKL*WSITFN
Trigger: GTTGAAAGTTATGGACCAGCAGAGCTTTAACAAATT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCATGATCAATCAGAATaGGAGACACTGTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLHDQSE*ETLLTK
Trigger: TTTAGTCAACAGTGTCTCGCATTCTGATTGATCATG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATGCCTCATGTCTGTTTaGACAGGAGACCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRCLMSV*TGDRSP
Trigger: AGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTCTCACCAACGTGATGTaGAAAATGATGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFLTNVM*KMMCSN
Trigger: GTTGCTGCACATCATTTTCCACATCACGTTGGTGAG...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCCCGCTGTTATTTGGATaGGGCTACAAGCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGPLLFG*GYKPGL
Trigger: AAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGG...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCTCCCCGCTGTTATTTaGATGGGGCTACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPLPAVI*MGLQAR
Trigger: CCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCAGCAGGCCATCAGATaGTTTGTAGTCATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSQQAIR*FVVILG
Trigger: ACCCAGGATGACTACAAACCATCTGATGGCCTGCTG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAACTCCATGGGCAGGCTTaGGTGGATGGTGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKLHGQA*VDGVVI
Trigger: GATTACCACACCATCCACCCAAGCCTGCCCATGGAG...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGATTTTGCCACAGGCCTaGGAAGTTCTCAAACTGATA +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEILPQA*EVLKLI
Trigger: TATCAGTTTGAGAACTTCCCAGGCCTGTGGCAAAAT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCCAGACGGCGCAGCTTaGCGTACGGCAGAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLPDGAA*RTAEQK
Trigger: CTTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCCGCACAATGAAATCTaGGAAGTACAGCCACTTTAT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQPHNEI*EVQPLY
Trigger: ATAAAGTGGCTGTACTTCCCAGATTTCATTGTGCGG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGCAGTGAATAAAATCTaGCACAGGGTTATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQAVNKI*HRVMLA
Trigger: AGCCAACATAACCCTGTGCCAGATTTTATTCACTGC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGCAGTGAATAAAATCTaGCACAGGGTTATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSAVNKI*HRVMLA
Trigger: AGCCAACATAACCCTGTGCCAGATTTTATTCACTGC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCTTGATGCCAGAATCTaGGAAGCTTTTATATCAGCC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLDARI*EAFISA
Trigger: GGCTGATATAAAAGCTTCCCAGATTCTGGCATCAAG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAGCTTCAGCTGGTCCATaGACTTCTTCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFEASAGP*TSSLPQ
Trigger: TTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGC...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACCACAGGACCCTCCTTaGATCCTTTCCGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRPQDPP*ILSAFV
Trigger: AACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGGATTTCTTTTTGATTaGTTCATCCTCCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSGFLFD*FILPVF
Trigger: GAAGACCGGGAGGATGAACCAATCAAAAAGAAATCC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACACTCCTATGATGTTTaGGGGGTGATACGGTTTATC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTHSYDV*GVIRFI
Trigger: GATAAACCGTATCACCCCCCAAACATCATAGGAGTG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGAAAAGCTGGATCTCTaGGATGGCTCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRREKLDL*DGSELL
Trigger: CAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCTTGTGCTGCCTCTTTaGGATCTGTTTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELVLPL*DLFEEK
Trigger: CTTTTCTTCAAACAGATCCCAAAGAGGCAGCACAAG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAACGGCCCCGGGACCTaGTCCTCTGACAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLNGPGT*SSDSEE
Trigger: CTCTTCACTGTCAGAGGACCAGGTCCCGGGGCCGTT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGAACACAAGAATGACCTaGAAGATGACCTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: IHVSHGAILRVDEVVKELNTRMT*KMTFPS
Trigger: ACTGGGAAAGGTCATCTTCCAGGTCATTCTTGTGTT...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTACAAAGTACCAAAGCTaGGCAACCAGGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSTKYQS*ATRFWL
Trigger: CAGCCAGAACCTGGTTGCCCAGCTTTGGTACTTTGT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTCAACTGGCTTTGTTaGGCACTCATTGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLFNWLC*ALIVKI
Trigger: TATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACAGCAGCTTCCCCAGTaGGGATGGAGCGCTGTATAT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRQQLPQ*GWSAVY
Trigger: ATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAATTGAAGCTGGTCACTaGTGGACCATAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTIEAGH*WTITKQ
Trigger: CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAAT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAGGAGGGGAGGCTCACTaGCATCCATGCCTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLGGEAH*HPCLVP
Trigger: AGGCACTAGGCATGGATGCCAGTGAGCCTCCCCTCC...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAAGGCTGTGCCACATGTaGGCATTGGAATTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFERLCHM*ALEFRV
Trigger: CACTCTAAATTCCAATGCCCACATGTGGCACAGCCT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCTGTCACAGGTTTCTaGACAATGTTTCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSVTGF*TMFLQR
Trigger: CCTCTGTAGAAACATTGTTCAGAAACCTGTGACAGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGATCTTCCAAGTACTTaGACAGTCCGTTTGAATTAC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSDLPST*TVRLNY
Trigger: GTAATTCAAACGGACTGTTCAAGTACTTGGAAGATC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGAGCTTTTTGCTCTGTaGGGTGCTGCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPELFAL*GAASAV
Trigger: TACTGCTGAGGCAGCACCTCACAGAGCAAAAAGCTC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTTTACCCTCGAAGCTaGCGAAGAAGAACATGCCTC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFYPRS*RRRTCL
Trigger: GAGGCATGTTCTTCTTCGTCAGCTTCGAGGGTAAAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAACACCTGCAGCTTGTaGAAATACTCCAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQENTCSL*KYSRNF
Trigger: AAAATTCCTGGAGTATTTTCACAAGCTGCAGGTGTT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGAACACCTGCAGCTTGTaGAAATACTCCAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQNTCSL*KYSRNF
Trigger: AAAATTCCTGGAGTATTTTCACAAGCTGCAGGTGTT...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAACACCTGCAGCTTGTaGAAATACTCCAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQNTCSL*KYSRNF
Trigger: AAAATTCCTGGAGTATTTTCACAAGCTGCAGGTGTT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTATCAATATGCTCCCTTaGAATGGAGTTAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSINMLP*NGVKPS
Trigger: ACTTGGCTTAACTCCATTTCAAGGGAGCATATTGAT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACTCTGGAAAGGTTCATaGTGTGGTTCTGATAGTACA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTLWKGS*CGSDST
Trigger: TGTACTATCAGAACCACATCATGAACCTTTCCAGAG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGGGAAGCAGGAGCGTaGTCATGGAGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLWEAGA*SWRQRP
Trigger: TGGTCTCTGCCTCCATGATCACGCTCCTGCTTCCCA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATTCAAAATTGATCGATaGAAGAACAGAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTFKIDR*KNRARS
Trigger: GCTCCTGGCTCTGTTCTTTCATCGATCAATTTTGAA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAAGAACATCCAGAAGTaGATTCCGAACACAAGAATG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSKNIQK*IPNTRM
Trigger: CATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATCTCTGAATACTCCATaGAAAAACAACAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRSLNTP*KNNREA
Trigger: AGCTTCTCTGTTGTTTTTTCATGGAGTATTCAGAGA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATTGCTTTATAGGTTTTaGGTTAGAATCACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLLYRF*VRITRC
Trigger: GCACCTAGTGATTCTAACTCAAAACCTATAAAGCAA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAGTGAGAAATCCCACTaGAGAATTCACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESEKSH*RIHGQI
Trigger: AATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAATGCGAGACACTGTTaGCTAAAACATAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVNARHC*LKHKAS
Trigger: ACTTGCTTTATGTTTTAGTCAACAGTGTCTCGCATT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAATGATTCCTTCACATaGTCAATCAGAATGCGAGAC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSNDSFT*SIRMRD
Trigger: GTCTCGCATTCTGATTGATCATGTGAAGGAATCATT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAATGATTCCTTCACATaGTCAATCAGAATGCGAGAC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQENDSFT*SIRMRD
Trigger: GTCTCGCATTCTGATTGATCATGTGAAGGAATCATT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTCAAAAATACATAGTTaGACAGAGACACCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSKIHS*TETPLP
Trigger: AGGCAAGGGTGTCTCTGTTCAACTATGTATTTTTGA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383408.6
CDS-3UTR TCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAAGATTTGCAGGAAAGTaGTGTGGACTCTACATCACG +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFERFAGK*CGLYIT
Trigger: CGTGATGTAGAGTCCACATCACTTTCCTGCAAATCT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAATGGGCCTTATATCCTTaGACAGAAGCACTGTCATTC +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFEWALYP*TEALSF
Trigger: GAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCA...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCCACAGAGGCAAGCCTaGGGAACATTTTTAACTTCG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSPQRQA*GTFLTS
Trigger: CGAAGTTAAAAATGTTCCGCAGGCTTGCCTCTGTGG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTACCAGGACCACCAGGTaGACAGACCCAAAAATACAA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSTRTTR*TDPKIQ
Trigger: TTGTATTTTTGGGTCTGTGCACCTGGTGGTCCTGGT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAGTCATTGGGTGGAACTaGCTCTTGAAAGAATTGGAA +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPVIGWN*LLKELE
Trigger: TTCCAATTCTTTCAAGAGGCAGTTCCACCCAATGAC...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTTCAGCCACAGTAAACTaGTTTAAGCCAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFSATVN*FKPRSS
Trigger: TGAGGATCTTGGCTTAAAGCAGTTTACTGTGGCTGA...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTACGATTTTGATGATGTaGAACTCCAAAATCCACCAC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSTILMM*NSKIHH
Trigger: GTGGTGGATTTTGGAGTTGCACATCATCAAAATCGT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCCGCATCAAGGTTCATaGAGATCTCGACATTGTCAC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSPHQGS*RSRHCH
Trigger: GTGACAATGTCGAGATCTGCATGAACCTTGATGCGG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTATGAAAACTCTTCTTTaGAGCAGGAGGAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSMKTLL*SRRKAK
Trigger: TTTTGCCTTCCTCCTGCTGCAAAGAAGAGTTTTCAT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSFLYFC*LALMRS
Trigger: GGATCGCATCAAGGCCAGGCAACAGAAATATAAAAA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGTGTCTTTGTCGGAGTaGTGTTTTAGGATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEVSLSE*CFRISN
Trigger: ATTACTGATCCTAAAACAGCACTCCGACAAAGACAC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGGATAGTACATGTGGATaGTCTCCCGAGTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLDSTCG*SPELEH
Trigger: ATGTTCCAACTCGGGAGAGCATCCACATGTACTATC...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTCGAAGCTCACAGCCTTaGTGTAGGAGGGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNIRSSQP*CRRVGP
Trigger: AGGCCCCACCCTCCTACAGCAAGGCTGTGAGCTTCG...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATACATACGGTTCTTGCCTaGAGAGTCGTCCTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIIHTVLA*RVVLRA
Trigger: GGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATG...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCCACCCAGTCCATCACTaGCCTCAGCTCAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGHPVHH*PQLSQK
Trigger: TTTTTGACTGAGCTGAGGGCAGTGATGGACTGGGTG...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAATTTGTTAAAGCTCTaGTGGTCCATAACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLNLLKL*WSITFN
Trigger: GTTGAAAGTTATGGACCAGCAGAGCTTTAACAAATT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCTCGTGTATCATTTTCTaGTTACTGGGTGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLSCIIF*LLGGLM
Trigger: CATCAGCCCACCCAGTAAGCAGAAAATGATACACGA...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACAAGGTAGCTTTTACTaGAGAAGGATATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTQGSFY*RRISAP
Trigger: AGGAGCTGATATCCTTCTGCAGTAAAAGCTACCTTG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACATGATCAATCAGAATaGGAGACACTGTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRHDQSE*ETLLTK
Trigger: TTTAGTCAACAGTGTCTCGCATTCTGATTGATCATG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCAGGTAGGAGCTGTCTaGCCCCTATTGCTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPQVGAV*PLLLLH
Trigger: ATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGTCTTTTTACTCTTCTaGCTCATGTCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSVFLLF*LMSVCT
Trigger: TGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGAC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTCGCTTGATGCTAAACTaGCACTGTCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLRLMLN*HCQLMR
Trigger: CCTCATCAGCTGACAGTGGCAGTTTAGCATCAAGCG...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGATAGTAGTCATTGGGTaGAACTGCCTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQIVVIG*NCLLKE
Trigger: TTCTTTCAAGAGGCAGTTCCACCCAATGACTACTAT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGATAGTAGTCATTGGGTaGAACTGCCTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEIVVIG*NCLLKE
Trigger: TTCTTTCAAGAGGCAGTTCCACCCAATGACTACTAT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTAGATGCGGATCAGAGTaGCCAGAGTGTAGTACATCA +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVRCGSE*PECSTS
Trigger: TGATGTACTACACTCTGGCCACTCTGATCCGCATCT...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCCGCTGTTATTTGGATaGGGCTACAAGCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPPLLFG*GYKPGL
Trigger: AAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCCGGCTTCTCCAGGCTaGCAGTCAGATGCATCATGG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLPASPG*QSDASW
Trigger: CCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGTTAATGGTTTGGAGCTaGTACAACATTTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLLMVWS*YNILQT
Trigger: CGTCTGCAAAATGTTGTACCAGCTCCAAACCATTAA...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTTAATGGTTTGGAGCTaGTACAACATTTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELMVWS*YNILQT
Trigger: CGTCTGCAAAATGTTGTACCAGCTCCAAACCATTAA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCAGGCTTAATGGTTTaGAGCTGGTACAACATTTTG +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSGLMV*SWYNIL
Trigger: CAAAATGTTGTACCAGCTCCAAACCATTAAGCCTGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTCAGGCTTAATGGTTTaGAGCTGGTACAACATTTTG +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSGLMV*SWYNIL
Trigger: CAAAATGTTGTACCAGCTCCAAACCATTAAGCCTGA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAATGCAGATGAAATACTaGAAGGTGATGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTMQMKY*KVMMHA
Trigger: GGCATGCATCATCACCTTCCAGTATTTCATCTGCAT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACAGCTTTTACAATTGTaGCCTGGAAAAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTQLLQL*PGKVQL
Trigger: GAGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTGGGGAGGTAAGATGCTaGACCCCAGCTTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFGEVRC*TPACRC
Trigger: GCACCGACAAGCTGGGGTCCAGCATCTTACCTCCCC...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTCCATAACTTTCAACTaGCTTTGTTGGGCACTCATT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSSITFN*LCWALI
Trigger: AATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCAATTCGATCCACATTTaGAAGCTCTTCAAACATGAT +
Preference number: 4 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEINSIHI*KLFKHD
Trigger: ATCATGTTTGAAGAGCTTCCAAATGTGGATCGAATT...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATTCCTGAGAAGTCACTaGTGTTTAATGGAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRFLRSH*CLMERY
Trigger: ATACCTTTCCATTAAACACCAGTGACTTCTCAGGAA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGTGTCTCTGGAAGAATTaGACCCCGGGCTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLCLWKN*TPGSKT
Trigger: GGTCTTTGAGCCCGGGGTCCAATTCTTCCAGAGACA...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAGTTTTTGCTGTTCATTaGTCGTCTCTGAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFEVFAVH*SSLSIR
Trigger: CCTGATGCTCAGAGACGACCAATGAACAGCAAAAAC...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCACCAGGCCCAGAGTACTaGGTCCAGGCCTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSPGPEY*VQALGN
Trigger: ATTTCCCAAGGCCTGGACCCAGTACTCTGGGCCTGG...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTGCCTTGAGAACAGCATaGTTGCTTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLALRTA*LLQCSS
Trigger: GCTGCTACACTGAAGCAACCATGCTGTTCTCAAGGC...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGGACTTAAGTTTTGGGTaGGCTGATGGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLDLSFG*ADGPQR
Trigger: TCTTTGTGGACCATCAGCCCACCCAAAACTTAAGTC...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581680.1
3UTR CAA 72 bp AAAGCTCTGCTGGTCCATAACTTTCAACTGGCTTTGTaGGGCACTCATTGTGAAAATAGGCTGATACCCTCC +
Preference number: 4 (lower is better)
Translates to: KALLVHNFQLAL*GTHCENRLIPS
Trigger: GGAGGGTATCAGCCTATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGACCAGCAGAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTAAGAAGAGCACAGTaGGGCGGTCAATCACCAGGT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPLRRAQ*GGQSPG
Trigger: ACCTGGTGATTGACCGCCTCACTGTGCTCTTCTTAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCCACATGCTCCTATTaGCAGGATATTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSTCSY*QDIFHR
Trigger: ACGATGAAAAATATCCTGTCAATAGGAGCATGTGGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTCTGTGCAGGCCAGGCTaGAAGCCTGGATCAACCAAC +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNILCRPG*KPGSTN
Trigger: GTTGGTTGATCCAGGCTTTCAGCCTGGCCTGCACAG...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGGAAGTGTACAGGGTaGATTAGCAGCAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGKCTG*ISSRHL
Trigger: CAAATGCCTGCTGCTAATTCACCCTGTACACTTCCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGAAGTTCAGCTCCTCTTaGTGCCAGAATCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLKFSSS*CQNLGS
Trigger: GCTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTT...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCATCGGATTTCTTTTTaGTTGGTTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSHRISF*LVHPPG
Trigger: ACCGGGAGGATGAACCAATCAAAAAGAAATCCGATG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAATTGGAAGAAATACTTaGCTACAATTGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTIGRNT*LQLPPQ
Trigger: CTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAAT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAATTGTAGCTCTTGGTaGGGAAGTTCCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPNCSSW*GSSPGL
Trigger: GAGTCCTGGGGAACTTCCTCACCAAGAGCTACAATT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTTGCTTTATAGGTTTTaGGTTAGAATCACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELLYRF*VRITRC
Trigger: GCACCTAGTGATTCTAACTCAAAACCTATAAAGCAA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAATGTTTCCAGTCAGGTTaGGAACCCACCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKCFQSG*EPTTHC
Trigger: ACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACA...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTAGTGAGAAATCCCACTaGAGAATTCACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFSEKSH*RIHGQI
Trigger: AATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACT...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAATGCGAGACACTGTTaGCTAAAACATAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSNARHC*LKHKAS
Trigger: ACTTGCTTTATGTTTTAGTCAACAGTGTCTCGCATT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGAACCTACTGGAAGCATaGTCAACCCAAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLNLLEA*STQGRH
Trigger: GTGGCGGCCTTGGGTTGATCATGCTTCCAGTAGGTT...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp GCACAGTTTACTTGTGACTTGATAGAAATAGGCATTTGTGCACTGCATTTACCAGAAAGGCAACCACAATaGCCGCGGTGGGAATTTACC +
Preference number: 4 (lower is better)
Translates to: AQFTCDLIEIGICALHLPERQPQ*PRWEFT
Trigger: GGTAAATTCCCACCGCGGTCATTGTGGTTGCCTTTC...TGGTAAATGCAGTGCACAAATGCCTATTTCTATCAAGTCACAAGTAAACTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAAAGATACACAGTGGGTaGATTGGGCCTTATATCCTT +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFEKIHSG*IGPYIL
Trigger: AAGGATATAAGGCCCAATTCACCCACTGTGTATCTT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACGGGTTACTCTGTGCTaGTTCGTCTGTCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRRVTLC*FVCHRF
Trigger: AAACCTGTGACAGACGAAGCAGCACAGAGTAACCCG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGACATTTTTAACTTCGTaGTTTCTTCCAACTCGCCTT +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQTFLTS*FLPTRL
Trigger: AAGGCGAGTTGGAAGAAAGCACGAAGTTAAAAATGT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGCACAAGGGGCTCTTaGAGCCAGATGCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLCTRGS*SQMRIR
Trigger: TCTGATCCGCATCTGGCTGCAAGAGCCCCTTGTGCA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCATATTTTCTTCTGTTaGGAATCATCCAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSHIFFC*ESSKEC
Trigger: GCACTCTTTGGATGATTCGCAACAGAAGAAAATATG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTTTGCTCTGTGAGGTaGTGCCTCAGCAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFCSVR*CLSSSQ
Trigger: TTGGCTACTGCTGAGGCAGCACCTCACAGAGCAAAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATCTTGCAGAGCTTTTTaGTCTGTGAGGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSCRAF*SVRCCL
Trigger: GAGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCACAAAAACGTTGTATaGGATCAGCCAGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSHKNVV*DQPVPV
Trigger: TACTGGGACTGGCTGATCGCATACAACGTTTTTGTG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTCACAAAAACGTTGTATaGGATCAGCCAGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVHKNVV*DQPVPV
Trigger: TACTGGGACTGGCTGATCGCATACAACGTTTTTGTG...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCC +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTFLYFC*LALMRS
Trigger: GGATCGCATCAAGGCCAGGCAACAGAAATATAAAAA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCACCCAGTCCATCACTaGCCTCAGCTCAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPHPVHH*PQLSQK
Trigger: TTTTTGACTGAGCTGAGGGCAGTGATGGACTGGGTG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGAAAGCTTATCTGTTaGTATTTCCGATTTTGCACC +
Preference number: 4 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRKLIC*YFRFCT
Trigger: GGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTTCTGTGCTGTTGCCTaGTATCATTTTAGCGATATT +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEFCAVA*YHFSDI
Trigger: AATATCGCTAAAATGATAGCAGGCAACAGCACAGAA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGCCTCATGTCTGTTTaGACAGGAGACCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLCLMSV*TGDRSP
Trigger: AGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGGCTCACTGGCATCCATaGCTAGTGCCTTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLAHWHP*LVPYRE
Trigger: TTCTCTGTAAGGCACTAGGCATGGATGCCAGTGAGC...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCTCCCCGCTGTTATTTaGATGGGGCTACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLPAVI*MGLQAR
Trigger: CCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTGTTTTCTCTCATCAGTaGGGTAATGGGTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLVFSHQ*GNGLRT
Trigger: GGTACGCAACCCATTACCCCACTGATGAGAGAAAAC...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACAGCAGGCCATCAGATaGTTTGTAGTCATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRQQAIR*FVVILG
Trigger: ACCCAGGATGACTACAAACCATCTGATGGCCTGCTG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGGGCCAGTCTGTAGATaGTGTTGTCTTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPGPVCR*CCLLCW
Trigger: CCAGCAAAGAAGACAACACCATCTACAGACTGGCCC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGCCAGATCTCTGCGATaGCTTTCCTTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPARSLR*LSFCVY
Trigger: ATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLSFCMS*PSPGSW
Trigger: CCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLSFCMS*PSPGSW
Trigger: CCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACT...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATAAGTTTTTGCATGTCCTaGCCTTCCCCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIISFCMS*PSPGSW
Trigger: CCAGGAGCCAGGGGAAGGCCAGGACATGCAAAAACT...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGCATGGTACACTGCGTaGGCTCGCTGGAGATACTGT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLAWYTA*ARWRYC
Trigger: ACAGTATCTCCAGCGAGCCCACGCAGTGTACCATGC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTCACTCCTATGATGTTTaGGGGGTGATACGGTTTATC +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVHSYDV*GVIRFI
Trigger: GATAAACCGTATCACCCCCCAAACATCATAGGAGTG...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACATCTGATTCCTCCCTaGCCATGCCACTTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRHLIPP*PCHFQS
Trigger: TGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTGGGCAACCAGGTTCTaGCTGAATTTCCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPWATRF*LNFLSV
Trigger: GACTGAGAGGAAATTCAGCCAGAACCTGGTTGCCCA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTTCAACTGGCTTTGTTaGGCACTCATTGTGAAAATA +
Preference number: 4 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEFNWLC*ALIVKI
Trigger: TATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTTCCATAACTTTCAACTaGCTTTGTTGGGCACTCATT +
Preference number: 4 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFSITFN*LCWALI
Trigger: AATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGA...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACTTCCCCAGTGGGGATaGAGCGCTGTATATTGCATT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLPQWG*SAVYCI
Trigger: AATGCAATATACAGCGCTCCATCCCCACTGGGGAAG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCAGCAGCTTCCCCAGTaGGGATGGAGCGCTGTATAT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLQQLPQ*GWSAVY
Trigger: ATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGAAGCTGGTCACTGGTaGACCATAACAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRREAGHW*TITKQV
Trigger: CACCTGCTTTGTTATGGTCCACCAGTGACCAGCTTC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATATTCTAGGTCCCACTaGGTTGGTCTTTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTYSRSH*VGLFTL
Trigger: AAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAATCGAGAAAACCTACTaGAAGCATGATCAACCCAAG +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFEIEKTY*KHDQPK
Trigger: CTTGGGTTGATCATGCTTCCAGTAGGTTTTCTCGAT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGGGATCAAACCATGCATaGAACACATGGGTCACGGGA +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLGSNHA*NTWVTG
Trigger: TCCCGTGACCCATGTGTTCCATGCATGGTTTGATCC...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAATAGAAGAGTCACACTaGACTCCGACTGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFEIEESH*TPTGIF
Trigger: AAAGATTCCAGTCGGAGTCCAGTGTGACTCTTCTAT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGCCTTGAGAACAGCATaGTTGCTTCAGTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRALRTA*LLQCSS
Trigger: GCTGCTACACTGAAGCAACCATGCTGTTCTCAAGGC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTCTAAATCATCAAGGGTaGACTGCCTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVLNHQG*TALRTA
Trigger: TGCTGTTCTCAAGGCAGTCCACCCTTGATGATTTAG...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 72 bp AAGAAAGAACCAGGCCCAGAGTACTGGGTCCAGGCCTaGGGAAATAAATGCAATACAACACAAGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: KKEPGPEYWVQA*GNKCNTTQVRI
Trigger: TATTCTCACTTGTGTTGTATTGCATTTATTTCCCAAGGCCTGGACCCAGTACTCTGGGCCTGGTTCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGTCCGGGTTCACTATaGTCTTCCAAGTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGPGSL*SSKYLN
Trigger: GTTCAAGTACTTGGAAGATCATAGTGAACCCGGACC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCCTGACTGCCAATTTTaGCTTCCGATAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSPDCQF*LPIKEL
Trigger: AAGCTCTTTTATCGGAAGTCAAAATTGGCAGTCAGG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACCAAAATCCACCACATaGACACCTGCAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRPKSTT*TPAACE
Trigger: TTCACAAGCTGCAGGTGTTCATGTGGTGGATTTTGG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCCAAAATCCACCACATaGACACCTGCAGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPPKSTT*TPAACE
Trigger: TTCACAAGCTGCAGGTGTTCATGTGGTGGATTTTGG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTCCACATGCTCCTATTaGCAGGATATTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLSTCSY*QDIFHR
Trigger: ACGATGAAAAATATCCTGTCAATAGGAGCATGTGGA...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAACAAACTGGAATGCTaGCCTTCGTGGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPNKLEC*PSWRFF
Trigger: GAAGAACCTCCACGAAGGTCAGCATTCCAGTTTGTT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR TCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTCTCTGGAAAGGTTCATaGTGTGGTTCTGATAGTACA +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVLWKGS*CGSDST
Trigger: TGTACTATCAGAACCACATCATGAACCTTTCCAGAG...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTCAAAATTGATCGATaGAAGAACAGAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFKIDR*KNRARS
Trigger: GCTCCTGGCTCTGTTCTTTCATCGATCAATTTTGAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTCACACCAGGTAAGATaGAGAACATCCAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSHQVR*RTSRSE
Trigger: TTCACTTCTGGATGTTCTTCATCTTACCTGGTGTGA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGGAATAAGAAGAGGTTaGCGTAATTGTAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSGIRRG*RNCSSW
Trigger: CCAAGAGCTACAATTACGTCAACCTCTTCTTATTCC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCTCTGAATACTCCATaGAAAAACAACAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSLNTP*KNNREA
Trigger: AGCTTCTCTGTTGTTTTTTCATGGAGTATTCAGAGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGACCAGTTCCAGGGCCTaGGAGTTCGGATTGTATATT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPTSSRA*EFGLYI
Trigger: AATATACAATCCGAACTCTCAGGCCCTGGAACTGGT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAATGCGAGACACTGTTaGCTAAAACATAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTNARHC*LKHKAS
Trigger: ACTTGCTTTATGTTTTAGTCAACAGTGTCTCGCATT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATTCAGAACGTCTGTGCTaGTGTCTCTGGAAGAATTGG +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYSERLC*CLWKNW
Trigger: CCAATTCTTCCAGAGACATCAGCACAGACGTTCTGA...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATAGAATGCACATGCTACTaGCAGGCAGATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDIECTCY*QADGQQ
Trigger: CTGCTGCCCATCTGCCTGGCAGTAGCATGTGCATTC...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGCAGTTGTAGCCAGGTaGAATACGATGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPAVVAR*NTMLSF
Trigger: GAAGCTCAACATCGTATTGCACCTGGCTACAACTGC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGCAGTTGTAGCCAGGTaGAATACGATGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRAVVAR*NTMLSF
Trigger: GAAGCTCAACATCGTATTGCACCTGGCTACAACTGC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACCACAGAGGCAAGCCTaGGGAACATTTTTAACTTCG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRPQRQA*GTFLTS
Trigger: CGAAGTTAAAAATGTTCCGCAGGCTTGCCTCTGTGG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCCACAGAGGCAAGCCTaGGGAACATTTTTAACTTCG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPPQRQA*GTFLTS
Trigger: CGAAGTTAAAAATGTTCCGCAGGCTTGCCTCTGTGG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGATACCAAACAACCTTaGATAGTAGTCATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSDTKQP*IVVIGW
Trigger: CCACCCAATGACTACTATGCAAGGTTGTTTGGTATC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAAGTCCAGTCATATTTTaGCACAGGCCTGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSPVIF*HRPGKF
Trigger: GAACTTCCCAGGCCTGTGGCAAAATATGACTGGACT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAGTCCAGTCATATTTTaGCACAGGCCTGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSPVIF*HRPGKF
Trigger: GAACTTCCCAGGCCTGTGGCAAAATATGACTGGACT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTCAGCCACAGTAAACTaGTTTAAGCCAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSATVN*FKPRSS
Trigger: TGAGGATCTTGGCTTAAAGCAGTTTACTGTGGCTGA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACGATTTTGATGATGTaGAACTCCAAAATCCACCAC +
Preference number: 4 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLTILMM*NSKIHH
Trigger: GTGGTGGATTTTGGAGTTGCACATCATCAAAATCGT...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCTCATCCTCAAAAATCTaGCGTTGTAAGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGSSSKI*RCKEAH
Trigger: GTGTGCCTCCTTACAACGGCAGATTTTTGAGGATGA...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSSESF*MSWPSP
Trigger: AGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATTCCTCCCTGGCCATaGCACTTTCAGTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRIPPWP*HFQSCH
Trigger: ATGACATGACTGAAAGTGGCATGGCCAGGGAGGAAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTGACTGCTGTTTCGGGTaGTTGTGCTGCCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFDCCFG*LCCLFG
Trigger: CCCAAAGAGGCAGCACAAGCACCCGAAACAGCAGTC...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACATGATCAATCAGAATaGGAGACACTGTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTHDQSE*ETLLTK
Trigger: TTTAGTCAACAGTGTCTCGCATTCTGATTGATCATG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATACAAGGATCAAACCATaGATGGAACACATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TVGELGLISLNRSTVIRYTRIKP*MEHMGH
Trigger: GTGACCCATGTGTTCCATGCATGGTTTGATCCTTGT...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTGCATAGTAGTCATTaGGTGGAACTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLHSSH*VELPLE
Trigger: TTCAAGAGGCAGTTCCACCCAATGACTACTATGCAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTTTGCATAGTAGTCATTaGGTGGAACTGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVLHSSH*VELPLE
Trigger: TTCAAGAGGCAGTTCCACCCAATGACTACTATGCAA...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGTTTTCTCTCATCAGTaGGGTAATGGGTTGCGTACC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPVFSHQ*GNGLRT
Trigger: GGTACGCAACCCATTACCCCACTGATGAGAGAAAAC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAGTCATCCTGGGTCATaGATAAAAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSHPGS*IKVFSH
Trigger: ATGAGAGAAAACTTTTATCCATGACCCAGGATGACT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACTTCTTCCTCCTCTTTaGGCTCTCCTTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLLPPL*ALLPLV
Trigger: TACAAGTGGAAGGAGAGCCCAAAGAGGAGGAAGAAG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCCAGCAGAAAGGAGGTTaGGATGAATATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGQQKGG*DEYASE
Trigger: TTCACTCGCATATTCATCCCAACCTCCTTTCTGCTG...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTCCGCACAATGAAATCTaGGAAGTACAGCCACTTTAT +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVPHNEI*EVQPLY
Trigger: ATAAAGTGGCTGTACTTCCCAGATTTCATTGTGCGG...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTGCAGTGAATAAAATCTaGCACAGGGTTATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVAVNKI*HRVMLA
Trigger: AGCCAACATAACCCTGTGCCAGATTTTATTCACTGC...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGCTTCAGCTGGTCCATaGACTTCTTCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPASAGP*TSSLPQ
Trigger: TTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGCTTCAGCTGGTCCATaGACTTCTTCTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRASAGP*TSSLPQ
Trigger: TTGAGGAAGAGAAGAAGTCCATGGACCAGCTGAAGC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCATCCCCGTCCAAGGTaGAGAACTGTGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLHPRPR*RTVSAL
Trigger: AAGAGCTGACACAGTTCTCCACCTTGGACGGGGATG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTCATCCCATAAGCCATaGCACTTCAAAATTGATCGA +
Preference number: 4 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLSSHKP*HFKIDR
Trigger: TCGATCAATTTTGAAGTGCCATGGCTTATGGGATGA...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTGAAAAGCTGGATCTCTaGGATGGCTCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFEKLDL*DGSELL
Trigger: CAGCAGCTCCGAGCCATCCCAGAGATCCAGCTTTTC...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATTTCTGCTTACTGGGTaGGCTGATGGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRFLLTG*ADGPQR
Trigger: TCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCAGAGAAGCTACTATTaGGGTCCAGGAGTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPQRSYY*GPGVRV
Trigger: TACACGAACTCCTGGACCCCAATAGTAGCTTCTCTG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCACATGCATGGAACACATaGGTCACGGGAACGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSHAWNT*VTGTPE
Trigger: TTCAGGCGTTCCCGTGACCCATGTGTTCCATGCATG...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATGGACTCTACATCACGTaGTCGTTTGGGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYGLYIT*SFGKTQ
Trigger: CTGTGTTTTCCCAAACGACCACGTGATGTAGAGTCC...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGTGCAGGAAAGTGATGTaGACTCTACATCACGTGGTC +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLCRKVM*TLHHVV
Trigger: GACCACGTGATGTAGAGTCCACATCACTTTCCTGCA...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCAGGCTTCCTTCCGGGTaGGCCAGTCTATTTATTATT +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGRLPSG*ASLFII
Trigger: AATAATAAATAGACTGGCCCACCCGGAAGGAAGCCT...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 72 bp CTCTTGATGATATTATCTGGTCCATCGGATTTCTTTTaGATTGGTTCATCCTCCCGGTCTTCCCATTCCACA +
Preference number: 4 (lower is better)
Translates to: LLMILSGPSDFF*IGSSSRSSHST
Trigger: TGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAAATCCGATGGACCAGATAATATCATCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
3UTR CAA 72 bp ACCATTAAAGTAATGCCTTCACATAAGCCGAGAGATTaGCAGGAAAGTGATGTGGACTCTACATCACGTGGT +
Preference number: 4 (lower is better)
Translates to: TIKVMPSHKPRD*QESDVDSTSRG
Trigger: ACCACGTGATGTAGAGTCCACATCACTTTCCTGCAAATCTCTCGGCTTATGTGAAGGCATTACTTTAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTCCGTTTGAATTACTaGCTTGATACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSVRLNY*LDTKQP
Trigger: AGGTTGTTTGGTATCAAGTCAGTAATTCAAACGGAC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCCCTGACTGCCAATTTTaGCTTCCGATAAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGPDCQF*LPIKEL
Trigger: AAGCTCTTTTATCGGAAGTCAAAATTGGCAGTCAGG...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCACACAGAAGCAGCATaGAGTCATAGACGAGAAACA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPHTEAA*SHRRET
Trigger: TGTTTCTCGTCTATGACTTCATGCTGCTTCTGTGTG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAAGTTCAGCTCCTCTTaGTGCCAGAATCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLKFSSS*CQNLGS
Trigger: GCTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCATCGGATTTCTTTTTaGTTGGTTCATCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPHRISF*LVHPPG
Trigger: ACCGGGAGGATGAACCAATCAAAAAGAAATCCGATG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACACGTAGAATTTCTCTaGCTCTTCAAGCTCATCGTC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRHVEFL*LFKLIV
Trigger: GACGATGAGCTTGAAGAGTCAGAGAAATTCTACGTG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCACGTAGAATTTCTCTaGCTCTTCAAGCTCATCGTC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPHVEFL*LFKLIV
Trigger: GACGATGAGCTTGAAGAGTCAGAGAAATTCTACGTG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTCTGACAGTGAAGAGGTaGTGTCTGCAGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFLTVKR*CLQLLS
Trigger: ACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAG...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAACCATGGTTCCAAACTaGATGAGGACCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRTMVPN*MRTITK
Trigger: TTTGGTGATGGTCCTCATTCAGTTTGGAACCATGGT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGCTTACTGGGTGGGCTaGTGGTCCACAAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLAYWVG*WSTKNL
Trigger: CAAATTCTTTGTGGACCATCAGCCCACCCAGTAAGC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGTTTCCAGTCAGGTTaGGAACCCACCACTCACTGT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLCFQSG*EPTTHC
Trigger: ACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGAAGCTCTTCAAACATaGTGGAGTGAGAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRREALQT*WSEKSH
Trigger: GTGGGATTTCTCACTCCATCATGTTTGAAGAGCTTC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGACGGGGCCCATAAATaGTTCCTTCACATGATCAAT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPDGAHK*FLHMIN
Trigger: ATTGATCATGTGAAGGAATCATTTATGGGCCCCGTC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCAGGTCACGGGAACGCCTaGATTCTGGTCAAGGATATA +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSGHGNA*ILVKDI
Trigger: TATATCCTTGACCAGAATTCAGGCGTTCCCGTGACC...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTATTCATTGGTCGTCTCTaGGCATCAGGTGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLFIGRL*ASGGLK
Trigger: CTTCAAGCCACCTGATGCTCAGAGACGACCAATGAA...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGCTCTGTGAGGTGCTaGCTCAGCAGTAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLCSVRC*LSSSQK
Trigger: TTTTTGGCTACTGCTGAGGCAGCACCTCACAGAGCA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACGGTCAATCACCAGGTaGCATTTGTTCCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRRSITR*HLFLKS
Trigger: AGACTTAAGGAACAAATGGCACCTGGTGATTGACCG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCGATGGCTTTCCTTCTaGGTCTATATAAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPRWLSF*VYIRQR
Trigger: TCGCTGTCTTATATAGACGCAGAAGGAAAGCCATCG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTATGAAAACTCTTCTTTaGAGCAGGAGGAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSMKTLL*SRRKAK
Trigger: TTTTGCCTTCCTCCTGCTGCAAAGAAGAGTTTTCAT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFLYFC*LALMRS
Trigger: GGATCGCATCAAGGCCAGGCAACAGAAATATAAAAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTTCTCTGGTCAGCATaGATCGTTCAATTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFLWSA*IVQFSE
Trigger: TTCTGAGAATTGAACGATGCATGCTGACCAGAGAAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGATAGTACATGTGGATaGTCTCCCGAGTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPDSTCG*SPELEH
Trigger: ATGTTCCAACTCGGGAGAGCATCCACATGTACTATC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCACCCAGTCCATCACTaGCCTCAGCTCAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLHPVHH*PQLSQK
Trigger: TTTTTGACTGAGCTGAGGGCAGTGATGGACTGGGTG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAAATTTGTTAAAGCTCTaGTGGTCCATAACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPNLLKL*WSITFN
Trigger: GTTGAAAGTTATGGACCAGCAGAGCTTTAACAAATT...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCTTCTGTGCTGTTGCCTaGTATCATTTTAGCGATATT +
Preference number: 4 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLFCAVA*YHFSDI
Trigger: AATATCGCTAAAATGATAGCAGGCAACAGCACAGAA...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATGGAGCGCTGTATATTaGATTGTAGCATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRWSAVY*IVASLQ
Trigger: CTGGAGAGATGCTACAATGCAATATACAGCGCTCCA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCTCACCAACGTGATGTaGAAAATGATGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPLTNVM*KMMCSN
Trigger: GTTGCTGCACATCATTTTCCACATCACGTTGGTGAG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGGGCCAGTCTGTAGATaGTGTTGTCTTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLGPVCR*CCLLCW
Trigger: CCAGCAAAGAAGACAACACCATCTACAGACTGGCCC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302079.10
ENST00000383408.6
CDS-3UTR CCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATAGCCAGATCTCTGCGATaGCTTTCCTTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIIARSLR*LSFCVY
Trigger: ATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGC...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGGGCAACCAGGTTCTaGCTGAATTTCCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLWATRF*LNFLSV
Trigger: GACTGAGAGGAAATTCAGCCAGAACCTGGTTGCCCA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATTGAAGCTGGTCACTaGTGGACCATAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRIEAGH*WTITKQ
Trigger: CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTATTCTAGGTCCCACTaGGTTGGTCTTTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSYSRSH*VGLFTL
Trigger: AAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCTAAATCATCAAGGGTaGACTGCCTTGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPLNHQG*TALRTA
Trigger: TGCTGTTCTCAAGGCAGTCCACCCTTGATGATTTAG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTGCATGGTACACTGCGTaGGCTCGCTTGATGCTAAAC +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNIAWYTA*ARLMLN
Trigger: GTTTAGCATCAAGCGAGCCCACGCAGTGTACCATGC...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACGTTTTTGTTGGTTCTaGGAACAGAGGAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRRFCWF*EQRNEQ
Trigger: TTGCTCATTCCTCTGTTCTCAGAACCAACAAAAACG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAACGTTTTTGTTGGTTCTaGGAACAGAGGAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKRFCWF*EQRNEQ
Trigger: TTGCTCATTCCTCTGTTCTCAGAACCAACAAAAACG...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCGTTTTTGTTGGTTCTaGGAACAGAGGAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPRFCWF*EQRNEQ
Trigger: TTGCTCATTCCTCTGTTCTCAGAACCAACAAAAACG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACACCATCTCCTCCATTaGAATCCTCTTCATAGATCA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRHHLLH*NPLHRS
Trigger: TGATCTATGAAGAGGATTTCAATGGAGGAGATGGTG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATATGCCCAGGACTTTCATaGTGTCCTGCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIICPGLS*CPAHLL
Trigger: AAGAAGATGAGCAGGACATCATGAAAGTCCTGGGCA...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGCCCAGGACTTTCATaGTGTCCTGCTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLCPGLS*CPAHLL
Trigger: AAGAAGATGAGCAGGACATCATGAAAGTCCTGGGCA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAATCTTTGGGATCTGTTTaGAGAAAAGCTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKSLGSV*RKAGSL
Trigger: CAGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGA...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGAATAAGAAGAGGTTaGCGTAATTGTAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGIRRG*RNCSSW
Trigger: CCAAGAGCTACAATTACGTCAACCTCTTCTTATTCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGCAGAAGAGCGGTCCTaGCCTCAGTTATTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLAEERS*PQLLKS
Trigger: ACTCTTTAATAACTGAGGTCAGGACCGCTCTTCTGC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATTTCTTCTTCCCTTTCTaGGCCCATAAATTATGCCCT +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYFFFPF*AHKLCP
Trigger: AGGGCATAATTTATGGGCTCAGAAAGGGAAGAAGAA...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATGGCGTAGTAAGAAAGTaGGTGCATTTTAAGTTATCC +
Preference number: 4 (lower is better)
Translates to: TVGELGLISLNRSTVIRYGVVRK*VHFKLS
Trigger: GGATAACTTAAAATGCACTCACTTTCTTACTACGCC...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATCCTCATTCATCTTTATaGTCAGGAGGGAAACACACT +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYPHSSL*SGGKHT
Trigger: AGTGTGTTTCCCTCCTGATCATAAAGATGAATGAGG...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAACCAGATTGTTAGCGTaGCTGTCATACCCTGAACAG +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLTRLLA*LSYPEQ
Trigger: CTGTTCAGGGTATGACAGTCACGCTAACAATCTGGT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACCAGGACCACCAGGTaGACAGACCCAAAAATACAA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTRTTR*TDPKIQ
Trigger: TTGTATTTTTGGGTCTGTGCACCTGGTGGTCCTGGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCATATTTTCTTCTGTTaGGAATCATCCAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSHIFFC*ESSKEC
Trigger: GCACTCTTTGGATGATTCGCAACAGAAGAAAATATG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAGAGCTTCCTTTTCTTaGAGAGCTTTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPRASFS*RAFCSV
Trigger: CACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCATCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSSSESF*MSWPSP
Trigger: AGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGA...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTAGAAAGCTTATCTGTTaGTATTTCCGATTTTGCACC +
Preference number: 4 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVRKLIC*YFRFCT
Trigger: GGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCT...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTCATCAAGGGTGGACTaGCTTGAGAACAGCATGGTT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLSSRVD*LENSMV
Trigger: AACCATGCTGTTCTCAAGGCAGTCCACCCTTGATGA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCTTCTTCCTCCTCTTTaGGCTCTCCTTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLLPPL*ALLPLV
Trigger: TACAAGTGGAAGGAGAGCCCAAAGAGGAGGAAGAAG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACTTGATGCCAGAATCTaGGAAGCTTTTATATCAGCC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLDARI*EAFISA
Trigger: GGCTGATATAAAAGCTTCCCAGATTCTGGCATCAAG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGCAGCTTTTACAATTGTaGCCTGGAAAAGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLQLLQL*PGKVQL
Trigger: GAGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTG...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAATCTGTCGCTTCAGCTaGTCCATGGACTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLICRFS*SMDFFS
Trigger: AGAGAAGAAGTCCATGGACCAGCTGAAGCGACAGAT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGATTTCTTTTTGATTaGTTCATCCTCCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGFLFD*FILPVF
Trigger: GAAGACCGGGAGGATGAACCAATCAAAAAGAAATCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTGTTTGAAGAAAAGCTaGATCTCTGGGATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLCLKKS*ISGMAR
Trigger: CCGAGCCATCCCAGAGATCCAGCTTTTCTTCAAACA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATGGGCAACCAGGTTCTaGCTGAATTTCCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDIWATRF*LNFLSV
Trigger: GACTGAGAGGAAATTCAGCCAGAACCTGGTTGCCCA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATAACAAAGTACCAAAGCTaGGCAACCAGGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDITKYQS*ATRFWL
Trigger: CAGCCAGAACCTGGTTGCCCAGCTTTGGTACTTTGT...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACGAGGCGAAACCCTTaGAATAAGAAGAGGTTGACG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTRRNP*NKKRLT
Trigger: CGTCAACCTCTTCTTATTCCAAGGGTTTCGCCTCGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTCCTGAGAAGTCACTaGTGTTTAATGGAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFLRSH*CLMERY
Trigger: ATACCTTTCCATTAAACACCAGTGACTTCTCAGGAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATAATCAGAGTCCAAGGTaGAGCCCAAGCTCATTTTTA +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYNQSPR*SPSSFL
Trigger: TAAAAATGAGCTTGGGCTCCACCTTGGACTCTGATT...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAATGCTCAGGCATCTTTTaGATGACATATTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: WLEGCATCGHWNLECLFECSGIF*MTYFDL
Trigger: AAGATCAAAATATGTCATCCAAAAGATGCCTGAGCA...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGTCCGTTTGAATTACTaGCTTGATACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPVRLNY*LDTKQP
Trigger: AGGTTGTTTGGTATCAAGTCAGTAATTCAAACGGAC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACTTGAACAGTCCGTTTaGATTACTGACTTGATACCA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLEQSV*ITDLIP
Trigger: TGGTATCAAGTCAGTAATTCAAACGGACTGTTCAAG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATACACACAGAAGCAGCATaGAGTCATAGACGAGAAACA +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIIHTEAA*SHRRET
Trigger: TGTTTCTCGTCTATGACTTCATGCTGCTTCTGTGTG...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCACACAGAAGCAGCATaGAGTCATAGACGAGAAACA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLHTEAA*SHRRET
Trigger: TGTTTCTCGTCTATGACTTCATGCTGCTTCTGTGTG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTAGCGCAGGATGCTCTTaGTGGGTTTCAACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNISAGCS*WVSTAN
Trigger: ATTTGCTGTTGAAACCCATCAAGAGCATCCTGCGCT...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCCACATGCTCCTATTaGCAGGATATTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSTCSY*QDIFHR
Trigger: ACGATGAAAAATATCCTGTCAATAGGAGCATGTGGA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATGGCACTTCAAAATTaGTCGATGAAAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPMALQN*SMKEQS
Trigger: GCTCTGTTCTTTCATCGATCAATTTTGAAGTGCCAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACCATGGTTCCAAACTaGATGAGGACCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTMVPN*MRTITK
Trigger: TTTGGTGATGGTCCTCATTCAGTTTGGAACCATGGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCAAACATGATGGAGTaGGAAATCCCACTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSNMME*EIPLKN
Trigger: ATTCTTCAGTGGGATTTCTCACTCCATCATGTTTGA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATCAAACATGATGGAGTaGGAAATCCCACTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSNMME*EIPLKN
Trigger: ATTCTTCAGTGGGATTTCTCACTCCATCATGTTTGA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGCATAAAATATGTATGTaGATAGGGCTCTCGACCTCA +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLHKICM*IGLSTS
Trigger: TGAGGTCGAGAGCCCTATTCACATACATATTTTATG...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCATTTAGAGTGCCTTTTTaGAATTGGGGAGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSFRVPF*NWGGGV
Trigger: TACGCCTCCTCCCCAATTTCAAAAAGGCACTCTAAA...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATAGCAAATATAGCCACTaGGTTCCAGAATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYSKYSH*VPEFLI
Trigger: AATGAGGAATTCTGGAACTCAGTGGCTATATTTGCT...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATAAAGTTTTGGGTGGGCTaGTGGTCCACAAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIIKFWVG*WSTKNL
Trigger: CAAATTCTTTGTGGACCATCAGCCCACCCAAAACTT...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581680.1
CDS-3UTR GCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTCCACAGAGGCAAGCCTaGGGAACATTTTTAACTTCG +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNIPQRQA*GTFLTS
Trigger: CGAAGTTAAAAATGTTCCGCAGGCTTGCCTCTGTGG...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCACAAAAACGTTGTATaGGATCAGCCAGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLHKNVV*DQPVPV
Trigger: TACTGGGACTGGCTGATCGCATACAACGTTTTTGTG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATTTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCC +
Preference number: 4 (lower is better)
Translates to: KSEASIHEDTQWVNWALYFLYFC*LALMRS
Trigger: GGATCGCATCAAGGCCAGGCAACAGAAATATAAAAA...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATCTTCAGAGAGTTTTTaGATGTCCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDISSESF*MSWPSP
Trigger: AGGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTTTTGAACTTTCTGTaGTGTTGCCTGCTATCATTT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFLNFL*CCLLSF
Trigger: AAATGATAGCAGGCAACAGCACAGAAAGTTCAAAAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGTCTTTTTACTCTTCTaGCTCATGTCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPVFLLF*LMSVCT
Trigger: TGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGAC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAAGGAGGGAAACACACTaGATTCTATGTGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLRRETH*ILCGYQ
Trigger: CTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATCATCAAGGGTGGACTaGCTTGAGAACAGCATGGTT +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDISSRVD*LENSMV
Trigger: AACCATGCTGTTCTCAAGGCAGTCCACCCTTGATGA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATAGTAGTCATTGGGTaGAACTGCCTCTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRIVVIG*NCLLKE
Trigger: TTCTTTCAAGAGGCAGTTCCACCCAATGACTACTAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATCAGGCTTAATGGTTTaGAGCTGGTACAACATTTTG +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSGLMV*SWYNIL
Trigger: CAAAATGTTGTACCAGCTCCAAACCATTAAGCCTGA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAATCAGGCTTAATGGTTTaGAGCTGGTACAACATTTTG +
Preference number: 4 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKSGLMV*SWYNIL
Trigger: CAAAATGTTGTACCAGCTCCAAACCATTAAGCCTGA...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATAAGCAGGCGTGGATCATaGCATAGAAATCCATTCGCT +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDISRRGS*HRNPFA
Trigger: AGCGAATGGATTTCTATGCCATGATCCACGCCTGCT...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATCCATAACTTTCAACTaGCTTTGTTGGGCACTCATT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSITFN*LCWALI
Trigger: AATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATTTCTGCTTACTGGGTaGGCTGATGGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDIFLLTG*ADGPQR
Trigger: TCTTTGTGGACCATCAGCCCACCCAGTAAGCAGAAA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTAATTCGATCCACATTTaGAAGCTCTTCAAACATGAT +
Preference number: 4 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSNSIHI*KLFKHD
Trigger: ATCATGTTTGAAGAGCTTCCAAATGTGGATCGAATT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCAACACTGGACTCCGACTaGAATCTTTTGTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSTLDSD*NLLSLD
Trigger: GTCCAAAGACAAAAGATTCCAGTCGGAGTCCAGTGT...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGCATCACGTGGTCGTTTaGGAAAACACAGACTATTAT +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLHHVVV*ENTDYY
Trigger: ATAATAGTCTGTGTTTTCCCAAACGACCACGTGATG...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
3UTR CAA 72 bp ATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTaGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IKELQSILGPTG*VFLLFCLMSVC
Trigger: GCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTCAAGCTCATCGTCGTaGAACATCTTTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TFCAVACYHFSDILSSNISSSSS*NIFFSS
Trigger: GCTGCTGAAAAAGATGTTTCACGACGATGAGCTTGA...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTATACTCCGGGTGGATaGGGTTGTAAAAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLYTPGG*GCKRTV
Trigger: AACAGTTCTTTTACAACCTCATCCACCCGGAGTATA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATTGCTTTATAGGTTTTaGGTTAGAATCACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLLYRF*VRITRC
Trigger: GCACCTAGTGATTCTAACTCAAAACCTATAAAGCAA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCAGTGACTGTCATACCCTaGACAGTAAATAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSVTVIP*TVNRRV
Trigger: GACTCTTCTATTTACTGTTCAGGGTATGACAGTCAC...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR TCA 90 bp GCACAGTTTACTTGTGACTTGATAGAAATAGGCATTTGTGCACTGCATTTACCATTACCCCAGGTGAGGTaGAAAAACATTCAATATGAC +
Preference number: 4 (lower is better)
Translates to: AQFTCDLIEIGICALHLPLPQVR*KNIQYD
Trigger: GTCATATTGAATGTTTTTTCACCTCACCTGGGGTAA...TGGTAAATGCAGTGCACAAATGCCTATTTCTATCAAGTCACAAGTAAACTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGATACCAAACAACCTTaGATAGTAGTCATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLDTKQP*IVVIGW
Trigger: CCACCCAATGACTACTATGCAAGGTTGTTTGGTATC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAGAGCTTCCTTTTCTTaGAGAGCTTTTTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLRASFS*RAFCSV
Trigger: CACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTCTGTGCTGTTGCCTaGTATCATTTTAGCGATATT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFCAVA*YHFSDI
Trigger: AATATCGCTAAAATGATAGCAGGCAACAGCACAGAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTTTTTTGAACTTTCTGTaGTGTTGCCTGCTATCATTT +
Preference number: 4 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLFLNFL*CCLLSF
Trigger: AAATGATAGCAGGCAACAGCACAGAAAGTTCAAAAA...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGCATTGGAATTTAGAGTaGCTTTTTGAAATTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLHWNLE*LFEIGE
Trigger: CTCCCCAATTTCAAAAAGGCACTCTAAATTCCAATG...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAATAAGCCGAGAGATTTaGAGGAAAGTGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLISREI*RKVMWT
Trigger: AGTCCACATCACTTTCCTGCAAATCTCTCGGCTTAT...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAGTCATCCTGGGTCATaGATAAAAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSHPGS*IKVFSH
Trigger: ATGAGAGAAAACTTTTATCCATGACCCAGGATGACT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCATGCAGATGAAATACTaGAAGGTGATGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLMQMKY*KVMMHA
Trigger: GGCATGCATCATCACCTTCCAGTATTTCATCTGCAT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATACTTGATGCCAGAATCTaGGAAGCTTTTATATCAGCC +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIILDARI*EAFISA
Trigger: GGCTGATATAAAAGCTTCCCAGATTCTGGCATCAAG...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATAGATGCTCTCCCGAGTTaGAACATTGCCCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDIDALPS*NIALLN
Trigger: ATTAAGAAGGGCAATGTTCCAACTCGGGAGAGCATC...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTAGCCACATGTGGGCATTaGAATTTAGAGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLATCGH*NLECLF
Trigger: AAAAAGGCACTCTAAATTCCAATGCCCACATGTGGC...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTGGCAAGGCTAAAATaGCTGATGCAAACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLARLK*LMQTSQ
Trigger: TTGGGAAGTTTGCATCAGCCATTTTAGCCTTGCCAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
3UTR CAA 72 bp GAGGAAAAGAAAGCTTATCTGTTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTCTCTGAATACTCCATG +
Preference number: 4 (lower is better)
Translates to: EEKKAYLLLFPI*HPDLSFSEYSM
Trigger: CATGGAGTATTCAGAGAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTTTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAAGAACATCCAGAAGTaGATTCCGAACACAAGAATG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLKNIQK*IPNTRM
Trigger: CATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR TCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATCACACCAGGTAAGATaGAGAACATCCAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDISHQVR*RTSRSE
Trigger: TTCACTTCTGGATGTTCTTCATCTTACCTGGTGTGA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCATGAAAACTCTTCTTTaGAGCAGGAGGAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLMKTLL*SRRKAK
Trigger: TTTTGCCTTCCTCCTGCTGCAAAGAAGAGTTTTCAT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGTGTCTTTGTCGGAGTaGTGTTTTAGGATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLVSLSE*CFRISN
Trigger: ATTACTGATCCTAAAACAGCACTCCGACAAAGACAC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAATTTGTTAAAGCTCTaGTGGTCCATAACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPNLLKL*WSITFN
Trigger: GTTGAAAGTTATGGACCAGCAGAGCTTTAACAAATT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATTTTTGAACTTTCTGTaGTGTTGCCTGCTATCATTT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRFLNFL*CCLLSF
Trigger: AAATGATAGCAGGCAACAGCACAGAAAGTTCAAAAA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTAATGGTTTGGAGCTaGTACAACATTTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLMVWS*YNILQT
Trigger: CGTCTGCAAAATGTTGTACCAGCTCCAAACCATTAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTCATCCCATAAGCCATaGCACTTCAAAATTGATCGA +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLSSHKP*HFKIDR
Trigger: TCGATCAATTTTGAAGTGCCATGGCTTATGGGATGA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTCCATAACTTTCAACTaGCTTTGTTGGGCACTCATT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLSITFN*LCWALI
Trigger: AATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAAATTCGATCCACATTTaGAAGCTCTTCAAACATGAT +
Preference number: 4 (lower is better)
Translates to: DISSFCLPIRRETNHFRRNSIHI*KLFKHD
Trigger: ATCATGTTTGAAGAGCTTCCAAATGTGGATCGAATT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGACACTGCATTCTATGTaGCTATCAGGATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLTLHSM*LSGSAF
Trigger: AAAAGCAGATCCTGATAGCCACATAGAATGCAGTGT...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTCTTCAGTGTAGCAGCTaGAGATACTGTCATGTGAAT +
Preference number: 4 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFLQCSS*RYCHVN
Trigger: ATTCACATGACAGTATCTCCAGCTGCTACACTGAAG...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATAGTCCGTTTGAATTACTaGCTTGATACCAAACAACCT +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDIVRLNY*LDTKQP
Trigger: AGGTTGTTTGGTATCAAGTCAGTAATTCAAACGGAC...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATATCTCTGAATACTCCATaGAAAAACAACAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SRTNFPITRTTEAYNPIISLNTP*KNNREA
Trigger: AGCTTCTCTGTTGTTTTTTCATGGAGTATTCAGAGA...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR TCA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTAGTGAGAAATCCCACTaGAGAATTCACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFSEKSH*RIHGQI
Trigger: AATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACT...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR TCA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGCCACCAATATTTATGTaGGCTAGTGGAATTATCACA +
Preference number: 4 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLPPIFM*ASGIIT
Trigger: TGTGATAATTCCACTAGCTCACATAAATATTGGTGG...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR GCA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATATTTTTATATTTCTGTTaGCTGGCCTTGATGCGATCC +
Preference number: 4 (lower is better)
Translates to: FLISLVSMHRSILRTVDIFLYFC*LALMRS
Trigger: GGATCGCATCAAGGCCAGGCAACAGAAATATAAAAA...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAGAAAGCTTATCTGTTaGTATTTCCGATTTTGCACC +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLRKLIC*YFRFCT
Trigger: GGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGTGCTGTTGCCTaGTATCATTTTAGCGATATT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLFCAVA*YHFSDI
Trigger: AATATCGCTAAAATGATAGCAGGCAACAGCACAGAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAGTCATCCTGGGTCATaGATAAAAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLSHPGS*IKVFSH
Trigger: ATGAGAGAAAACTTTTATCCATGACCCAGGATGACT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCCTGAGAAGTCACTaGTGTTTAATGGAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLFLRSH*CLMERY
Trigger: ATACCTTTCCATTAAACACCAGTGACTTCTCAGGAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR GCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTTTTGAACTTTCTGTaGTGTTGCCTGCTATCATTT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLFLNFL*CCLLSF
Trigger: AAATGATAGCAGGCAACAGCACAGAAAGTTCAAAAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAATTCGATCCACATTTaGAAGCTCTTCAAACATGAT +
Preference number: 4 (lower is better)
Translates to: VIKELQSILGPTGLVFLLNSIHI*KLFKHD
Trigger: ATCATGTTTGAAGAGCTTCCAAATGTGGATCGAATT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CCA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTATTTATCCTCAGAACTTaGCCTTCTGTTTCAGATATT +
Preference number: 4 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLFILRT*PSVSDI
Trigger: AATATCTGAAACAGAAGGCCAAGTTCTGAGGATAAA...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS GCA 90 bp ACCGCGTCTCCTTTGCCCGGCCTCGTCTCCGCTGCCCACGCAGGCTaGCGCGCTCTGGCCTCGGCCCCGGCTCTCGGAGCTGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: TASPLPGLVSAAHAG*RALASAPALGAARR
Trigger: CCGCCGGGCAGCTCCGAGAGCCGGGGCCGAGGCCAGAGCGCGGCAGCCTGCGTGGGCAGCGGAGACGAGGCCGGGCAAAGGAGACGCGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS GCA 90 bp CGCCACCACGGGGCTCGCCTTGTGGGTCCGGTGCGCGGGCGGCGCTaGGAGTCCCTCCCTCACTCGAAGGAACGGCGCGAGCGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RHHGARLVGPVRGRR*ESLPHSKERRERGE
Trigger: CTCCCCACGCTCGCGCCGTTCCTTCGAGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 90 bp TGCCAGGCGCGCAGAACCATCCCCGCCACCACGGGGCTCGCCTTGTaGGTCCGGTGCGCGGGCGGCGCTGCGAGTCCCTCCCTCACTCGA +
Preference number: 5 (lower is better)
Translates to: CQARRTIPATTGLAL*VRCAGGAASPSLTR
Trigger: TCGAGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCGGGGATGGTTCTGCGCGCCTGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS GCA 90 bp CGCAGAACCATCCCCGCCACCACGGGGCTCGCCTTGTGGGTCCGGTaGGCGGGCGGCGCTGCGAGTCCCTCCCTCACTCGAAGGAACGGC +
Preference number: 5 (lower is better)
Translates to: RRTIPATTGLALWVR*AGGAASPSLTRRNG
Trigger: GCCGTTCCTTCGAGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCGGGGATGGTTCTGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 90 bp CGAGGGTCCCTAGGGGTGGTGGGACGCAAGGCCCATGCCCGTCTATaGCCTCTCGCCGCCGGCAGCTCGCAGCCACCCGAGCATCGCCTC +
Preference number: 5 (lower is better)
Translates to: RGSLGVVGRKAHARL*PLAAGSSQPPEHRL
Trigger: GAGGCGATGCTCGGGTGGCTGCGAGCTGCCGGCGGCGAGAGGCCATAGACGGGCATGGGCCTTGCGTCCCACCACCCCTAGGGACCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS TCA 90 bp CCACCTAGCCCGGCGCCCGGCCCCCTGCGGCCGGCCCATTTAGTGTaGATCCTGGATCCGGCAGCGGCGGCGGCTTCTTCAGGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PPSPAPGPLRPAHLV*ILDPAAAAASSGVA
Trigger: AGCTACCCCTGAAGAAGCCGCCGCCGCTGCCGGATCCAGGATTCACACTAAATGGGCCGGCCGCAGGGGGCCGGGCGCCGGGCTAGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 90 bp GTAGCTGATGCCGGGGCCTTGGAGAGGGACGCTTTGGGAGGGTCCTaGGAGGCGGCGCGGCGAGCAAAGGGGGCAAGAAGGGCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: VADAGALERDALGGS*EAARRAKGARRACC
Trigger: ACAGCACGCCCTTCTTGCCCCCTTTGCTCGCCGCGCCGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 90 bp GCAGATGGGCAGCAGCAGCCTGAAGATGAGCCCGCACACCACTTCTaGGGCCATCGCGTCGGTCCGGCGAGTCGGAGCAGAGGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: ADGQQQPEDEPAHHF*GHRVGPASRSRGAR
Trigger: CCTCGCCCCTCTGCTCCGACTCGCCGGACCGACGCGATGGCCTCAGAAGTGGTGTGCGGGCTCATCTTCAGGCTGCTGCTGCCCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS TCA 90 bp GTGAATCCTGGATCCGGCAGCGGCGGCGGCTTCTTCAGGGGTAGCTaGTGCCGGGGCCTTGGAGAGGGACGCTTTGGGAGGGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VNPGSGSGGGFFRGS*CRGLGEGRFGRVLG
Trigger: TCCCAGGACCCTCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAGCTACCCCTGAAGAAGCCGCCGCCGCTGCCGGATCCAGGATTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS GCA 90 bp CAGAGGGCTCCCACCGGTACTGAGGGGTGGAGTAGAGGTCGGCTTTaGCAGGGCCGTTCTCCATGGGCAGGCTTGGGTGGATGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: QRAPTGTEGWSRGRL*QGRSPWAGLGGWCG
Trigger: ACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGTGGGAGCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACCACGGGGCTCGCCTaGTGGGTCCGGTGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTTGLA*WVRCAG
Trigger: GCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 90 bp GGTCGGCTTTGCCAGGGCCGTTCTCCATGGGCAGGCTTGGGTGGATaGTGTGGTAATCCACGGGGTTGCCGTTCACAGTCACCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GRLCQGRSPWAGLGG*CGNPRGCRSQSPAG
Trigger: GCCTGCTGGTGACTGTGAACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 90 bp GAGTCCCTCCCTCACTCGAAGGAACGGCGCGAGCGTGGGGAGAAATaGAGACCAGAGCGCATATCGGGTGAGTGGGTCTCCCACTCCCTC +
Preference number: 5 (lower is better)
Translates to: ESLPHSKERRERGEK*RPERISGEWVSHSL
Trigger: GAGGGAGTGGGAGACCCACTCACCCGATATGCGCTCTGGTCTCCATTTCTCCCCACGCTCGCGCCGTTCCTTCGAGTGAGGGAGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CAA 90 bp GCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCTCGATGCTGGACCCCAGCTaGTCGGTGCGGCTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: AIRFLPAESSCEPKDRCSMLDPS*SVRLSS
Trigger: GGACGACAGCCGCACCGACAAGCTGGGGTCCAGCAT...CGAGCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS TCA 90 bp TCCTCACCTCCGGCTTCTCCAGGCTGGCAGTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTTCCGGGTGGGCCAGTCTGTAGATGG +
Preference number: 5 (lower is better)
Translates to: SSPPASPGWQSDASW*GPGGFLPGGPVCRW
Trigger: CCATCTACAGACTGGCCCACCCGGAAGGAAGCCTCCCGGACCTCACCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGGAGGTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000583325.1
CDS GCA 90 bp TCAGCCAACTTCCTCACCTCCGGCTTCTCCAGGCTGGCAGTCAGATaGATCATGGTGAGGTCCGGGAGGCTTCCTTCCGGGTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: SANFLTSGFSRLAVR*IMVRSGRLPSGWAS
Trigger: ACTGGCCCACCCGGAAGGAAGCCTCCCGGACCTCACCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGGAGGTGAGGAAGTTGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS CCA 90 bp ACTGAGGGGTGGAGTAGAGGTCGGCTTTGCCAGGGCCGTTCTCCATaGGCAGGCTTGGGTGGATGGTGTGGTAATCCACGGGGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: TEGWSRGRLCQGRSP*AGLGGWCGNPRGCR
Trigger: ACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCACCCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAACTGCCATACGGTTCTaGCCTGCAGAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGTAIRF*PAESSC
Trigger: GCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS TCA 90 bp CTGCTCAGCCTCCACCTCCTCGATGGTCTCAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTGCGTGGGCTCGCTGGAGATACTGTC +
Preference number: 5 (lower is better)
Translates to: LLSLHLLDGLSGPLA*VQHGTLRGLAGDTV
Trigger: GACAGTATCTCCAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGGCTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
CDS CCA 90 bp GGAGTAGAGGTCGGCTTTGCCAGGGCCGTTCTCCATGGGCAGGCTTaGGTGGATGGTGTGGTAATCCACGGGGTTGCCGTTCACAGTCAC +
Preference number: 5 (lower is better)
Translates to: GVEVGFARAVLHGQA*VDGVVIHGVAVHSH
Trigger: GTGACTGTGAACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 90 bp GCTTTTCTGAGGATTCATCAGAGGGCTCCCACCGGTACTGAGGGGTaGAGTAGAGGTCGGCTTTGCCAGGGCCGTTCTCCATGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AFLRIHQRAPTGTEG*SRGRLCQGRSPWAG
Trigger: GCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGTGGGAGCCCTCTGATGAATCCTCAGAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 90 bp TCCTCCTGCTCAGCCTCCACCTCCTCGATGGTCTCAGTGGTCCCCTaGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTGGAGATA +
Preference number: 5 (lower is better)
Translates to: SSCSASTSSMVSVVP*REYSMVHCVGSLEI
Trigger: TATCTCCAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAGGCTGAGCAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
CDS-3UTR CAA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACAGCAGGAGGATAGGGTaGGCGTGGTGGTACCACGAC +
Preference number: 5 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDSRRIG*AWWYHD
Trigger: GTCGTGGTACCACCACGCCAACCCTATCCTCCTGCT...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS TCA 90 bp TCCTCACCTCCGGCTTCTCCAGGCTGGCAGTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTTCCGGGTGGGCCAGTTCATTTTGGT +
Preference number: 5 (lower is better)
Translates to: SSPPASPGWQSDASW*GPGGFLPGGPVHFG
Trigger: ACCAAAATGAACTGGCCCACCCGGAAGGAAGCCTCCCGGACCTCACCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGGAGGTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580640.5
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCAGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ADEEDISMLSILRSLGRAVASYS*ASLGSG
Trigger: GCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCAC...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCVASYS*ASLGSG
Trigger: GCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCAC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCTTCTTCTGGCCCCGTGGCTGAGGGTATCTCTTCTCCGACTCCCGCCAACACTTCCCCAGGACTCGCGTaGGGTAGCCACAACGGATCT +
Preference number: 5 (lower is better)
Translates to: SSSGPVAEGISSPTPANTSPGLA*GSHNGS
Trigger: AGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGGA...AGTGTTGGCGGGAGTCGGAGAAGAGATACCCTCAGCCACGGGGCCAGAAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS TCA 90 bp ACGGCGCGAGCGTGGGGAGAAATGGAGACCAGAGCGCATATCGGGTaGGTGGGTCTCCCACTCCCTCCTCCACCGCCTCAATTTAAAACT +
Preference number: 5 (lower is better)
Translates to: TARAWGEMETRAHIG*VGLPLPPPPPQFKT
Trigger: AGTTTTAAATTGAGGCGGTGGAGGAGGGAGTGGGAGACCCACTCACCCGATATGCGCTCTGGTCTCCATTTCTCCCCACGCTCGCGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 90 bp GGGTTGCGTACCACAGGCTCCGCCTCCTCCCCGCTGTTATTTGGATaGGGCTACAAGCCAGGGCTTTGTCCTCTTCTTTGGTCCCCTCAT +
Preference number: 5 (lower is better)
Translates to: GLRTTGSASSPLLFG*GYKPGLCPLLWSPH
Trigger: ATGAGGGGACCAAAGAAGAGGACAAAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGGAGGCGGAGCCTGTGGTACGCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGACAGTGGGGTAATGGGTaGCGTACCACAGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRQWGNG*RTTGSA
Trigger: GGCGGAGCCTGTGGTACGCAACCCATTACCCCACTG...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CGATGGCCATCATCCAGAACCGGCGGCTGGGCCTGGGGACGGACAACATGGCCCTTCTTCAGCTTCCTCTaGCTCTACCTTCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: RWPSSRTGGWAWGRTTWPFFSFL*LYLLSL
Trigger: GAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAA...GGGCCATGTTGTCCGTCCCCAGGCCCAGCCGCCGGTTCTGGATGATGGCCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAATGCTGGACCCCAGCTaGTCGGTGCGGCTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEMLDPS*SVRLSS
Trigger: GGACGACAGCCGCACCGACAAGCTGGGGTCCAGCAT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGACGTCCAGGGGCTGGTaGATGACCCCAGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: VDGLERIGGVPPAMTEGETSRGW*MTPATD
Trigger: ATCTGTGGCTGGGGTCATCAACCAGCCCCTGGACGT...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTGCCACCGCGTCTCCTTaGCCCGGCCTCGTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSATASP*PGLVSA
Trigger: AGCGGAGACGAGGCCGGGCAAAGGAGACGCGGTGGC...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 90 bp TCCTCACCTCCGGCTTCTCCAGGCTGGCAGTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTTCCGGGTGGGCCAGTCTATTTATTA +
Preference number: 5 (lower is better)
Translates to: SSPPASPGWQSDASW*GPGGFLPGGPVYLL
Trigger: TAATAAATAGACTGGCCCACCCGGAAGGAAGCCTCCCGGACCTCACCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGGAGGTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS CCA 90 bp CGCGAGCGTGGGGAGAAATGGAGACCAGAGCGCATATCGGGTGAGTaGGTCTCCCACTCCCTCCTCCACCGCCTCAATTTAAAACTCAAG +
Preference number: 5 (lower is better)
Translates to: RERGEKWRPERISGE*VSHSLLHRLNLKLK
Trigger: CTTGAGTTTTAAATTGAGGCGGTGGAGGAGGGAGTGGGAGACCCACTCACCCGATATGCGCTCTGGTCTCCATTTCTCCCCACGCTCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAACCTCCCCGCTGTTATTaGGATGGGGCTACAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKPPRCY*DGATSQ
Trigger: CTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGG...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCAGTGGGGTAATGGGTaGCGTACCACAGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLQWGNG*RTTGSA
Trigger: GGCGGAGCCTGTGGTACGCAACCCATTACCCCACTG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ACTGCCATACGGTTCTTGCCTGCAGAGTCGTCCTGCGAGCCGAAGGACAGATGCCCGTCCCGTATGTCCTaGCATCGTCGTTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: TAIRFLPAESSCEPKDRCPSRMS*HRRFCW
Trigger: CCAACAAAAACGACGATGCAAGGACATACGGGACGG...GCATCTGTCCTTCGGCTCGCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACCTCCCCGCTGTTATTaGGATGGGGCTACAAGCCAG +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVPPRCY*DGATSQ
Trigger: CTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGCCAGACGGCGCAGCTaGGCGTACGGCAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVARRRS*AYGRAK
Trigger: TTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGGC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGAGTAATCACAAAAACGTaGTATGCGATCAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGVITKT*YAISQS
Trigger: GGACTGGCTGATCGCATACAACGTTTTTGTGATTAC...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATCCACAGGACCCTCCTaGGATCCTTTCCGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVSTGPS*DPFRLR
Trigger: ACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGGA...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATCCCCAGGACTCGCGTaGGGTAGCCACAACGGATCT +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESPGLA*GSHNGS
Trigger: AGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGGA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS TCA 90 bp CATTTTGCAGACGATGATCACACACGTCCAGACTGTGCAGACACTTaGAGCCAGACGGCGCAGCTTGGCGTACGGCAGAGCAAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: HFADDDHTRPDCADT*SQTAQLGVRQSKSP
Trigger: TGGGCTTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGGCTTCAAGTGTCTGCACAGTCTGGACGTGTGTGATCATCGTCTGCAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 90 bp TCTCCATGGGCAGGCTTGGGTGGATGGTGTGGTAATCCACGGGGTTaGCGTTCACAGTCACCAGCAGGCCATCAGATGGTTTGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: SPWAGLGGWCGNPRG*RSQSPAGHQMVCSH
Trigger: ATGACTACAAACCATCTGATGGCCTGCTGGTGACTGTGAACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 90 bp AGCAGTGAAAATAGCCAGCAGAACACAGAGACAGCTGAACAGCAATaGGTCGAACGTCCGGCACCAGGACCACCAGGTGCACAGACCCAA +
Preference number: 5 (lower is better)
Translates to: SSENSQQNTETAEQQ*VERPAPGPPGAQTQ
Trigger: TTGGGTCTGTGCACCTGGTGGTCCTGGTGCCGGACGTTCGACCCATTGCTGTTCAGCTGTCTCTGTGTTCTGCTGGCTATTTTCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAGCAGGAGGATAGGGTaGGCGTGGTGGTACCACGAC +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSRRIG*AWWYHD
Trigger: GTCGTGGTACCACCACGCCAACCCTATCCTCCTGCT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTCAGTGGGGTAATGGGTaGCGTACCACAGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSQWGNG*RTTGSA
Trigger: GGCGGAGCCTGTGGTACGCAACCCATTACCCCACTG...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGCCAGACGGCGCAGCTaGGCGTACGGCAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEARRRS*AYGRAK
Trigger: TTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGGC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACAGCCACTTTATGATGTaGTCATTGAAGCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDSHFMM*SLKLAP
Trigger: GGGTGCCAGCTTCAATGACAACATCATAAAGTGGCT...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCATGGCACAGGGTTATGTaGGCTGAAGGAGGCCGCATC +
Preference number: 5 (lower is better)
Translates to: ADEEDISMLSILRSLGRAWHRVM*AEGGRI
Trigger: GATGCGGCCTCCTTCAGCCAACATAACCCTGTGCCA...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTGGCACAGGGTTATGTaGGCTGAAGGAGGCCGCATC +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLWHRVM*AEGGRI
Trigger: GATGCGGCCTCCTTCAGCCAACATAACCCTGTGCCA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAACTGCCATACGGTTCTaGCCTGCAGAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIETAIRF*PAESSC
Trigger: GCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAACAGACGCGGCCAGGTaGATGGACTTGAGAGAATCG +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVTDAAR*MDLRES
Trigger: CGATTCTCTCAAGTCCATCAACCTGGCCGCGTCTGT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCACAGCCTTGCTGTAGGAGGGTGGGGCCTCCACATCCCCGTCCAAGGTGGACTCTTTGGGATCTGTTaGAAGAAAAGCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: AHSLAVGGWGLHIPVQGGLFGIC*KKSWIS
Trigger: AGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAG...TCCACCTTGGACGGGGATGTGGAGGCCCCACCCTCCTACAGCAAGGCTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTGCCTCATGTCTGTTaGCACAGGAGACCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLPHVC*HRRPQP
Trigger: GGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS TCA 90 bp TTCTTCCTCCTCCTCGGATTCCTCCTCTTCCTCTCCGTCCTCCTCTaGCTCCTCGCTGTCTTTCCCAAGATCACCCTTCTGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: FFLLLGFLLFLSVLL*LLAVFPKITLLGFF
Trigger: GAAAAAGCCCAGAAGGGTGATCTTGGGAAAGACAGCGAGGAGTCAGAGGAGGACGGAGAGGAAGAGGAGGAATCCGAGGAGGAGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000578145.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 90 bp GGAAGCAGCAGTACTTGGGCCAGATCTCTGCGATGGCTTTCCTTCTaGGTCTATATAAGACAGCGATCAGCCAGCAGGCGTGGATCATGG +
Preference number: 5 (lower is better)
Translates to: GSSSTWARSLRWLSF*VYIRQRSASRRGSW
Trigger: CCATGATCCACGCCTGCTGGCTGATCGCTGTCTTATATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 90 bp GGGACGGAAGGTCTGATGGAGACTGCCAGTGAACAACAAGGCCTCTaGCATGCTGTGGGTCTGGATGAACATCTGGACATGGTCTCACAT +
Preference number: 5 (lower is better)
Translates to: GTEGLMETASEQQGL*HAVGLDEHLDMVSH
Trigger: ATGTGAGACCATGTCCAGATGTTCATCCAGACCCACAGCATGGCAGAGGCCTTGTTGTTCACTGGCAGTCTCCATCAGACCTTCCGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS-3UTR CAA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAATTGCCAATGAACTCCTaGAGCTTAGAGGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKLPMNS*SLEATE
Trigger: CTCTGTGGCCTCTAAGCTCAAGGAGTTCATTGGCAA...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAGCAGGAGGATAGGGTaGGCGTGGTGGTACCACGAC +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESRRIG*AWWYHD
Trigger: GTCGTGGTACCACCACGCCAACCCTATCCTCCTGCT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCTGCACAAGGGGCTCTaGCAGCCAGATGCGGATCAG +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELHKGL*QPDADQ
Trigger: CTGATCCGCATCTGGCTGCAAGAGCCCCTTGTGCAG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCCTGCACAAGGGGCTCTaGCAGCCAGATGCGGATCAG +
Preference number: 5 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPLHKGL*QPDADQ
Trigger: CTGATCCGCATCTGGCTGCAAGAGCCCCTTGTGCAG...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACCTCCCCGCTGTTATTaGGATGGGGCTACAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVPPRCY*DGATSQ
Trigger: CTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACCTCCCCGCTGTTATTaGGATGGGGCTACAAGCCAG +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRPPRCY*DGATSQ
Trigger: CTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTGATGGACTTGAGAGAATCGGAGGAGTCCCTCCTGCCATGACCGAGGGAGAGCAGTCCAGTCATATTTaGCCACAGGCCTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: VDGLERIGGVPPAMTEGEQSSHI*PQAWEV
Trigger: AACTTCCCAGGCCTGTGGCAAAATATGACTGGACTG...CTCTCCCTCGGTCATGGCAGGAGGGACTCCTCCGATTCTCTCAAGTCCATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGCCAGACGGCGCAGCTaGGCGTACGGCAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTARRRS*AYGRAK
Trigger: TTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGGC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAGACTGTGCAGACACTaGAAGCCAGACGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRRLCRH*KPDGAA
Trigger: AGCTGCGCCGTCTGGCTTCAAGTGTCTGCACAGTCT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAGGAAGCAGCAGTACTaGGGCCAGATCTCTGCGATG +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCRKQQY*GQISAM
Trigger: CATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCCT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTCTGTTGCCTGGCCTaGATGCGATCCATCTGTCGC +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLFCCLA*MRSICR
Trigger: GCGACAGATGGATCGCATCAAGGCCAGGCAACAGAA...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACTCTTCAGAGAGTTTTaGCATGTCCTGGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVLFREF*HVLAFP
Trigger: GGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATCCACAGGACCCTCCTaGGATCCTTTCCGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSTGPS*DPFRLR
Trigger: ACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGGA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGCCAGGTTGATGGACTaGAGAGAATCGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEARLMD*RESEES
Trigger: GGACTCCTCCGATTCTCTCAAGTCCATCAACCTGGC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACAGACGCGGCCAGGTaGATGGACTTGAGAGAATCG +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTDAAR*MDLRES
Trigger: CGATTCTCTCAAGTCCATCAACCTGGCCGCGTCTGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATGCTGTTTCGGGTGCTaGTGCTGCCTCTTTGGGATC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIECCFGC*CCLFGI
Trigger: GATCCCAAAGAGGCAGCACAAGCACCCGAAACAGCA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTCCCCAGGACTCGCGTaGGGTAGCCACAACGGATCT +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSPGLA*GSHNGS
Trigger: AGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGGA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACTGTTTCCAGTCAGGTaGAGAACCCACCACTCACTG +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVLFPVR*RTHHSL
Trigger: CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCTGCCTCATGTCTGTTaGCACAGGAGACCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQLPHVC*HRRPQP
Trigger: GGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACAAGGGTGGACTGCCTaGAGAACAGCATGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVQGWTA*RTAWLL
Trigger: AAGCAACCATGCTGTTCTCAAGGCAGTCCACCCTTG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 90 bp GTTGCCTTTGAAGATCCTCCAAAGAACATCCTGGGACGGAAGGTCTaGTGGAGACTGCCAGTGAACAACAAGGCCTCTGCCATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VAFEDPPKNILGRKV*WRLPVNNKASAMLW
Trigger: CCACAGCATGGCAGAGGCCTTGTTGTTCACTGGCAGTCTCCATCAGACCTTCCGTCCCAGGATGTTCTTTGGAGGATCTTCAAAGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS CCA 90 bp GGCTCGCTGGAGATACTGTCATGTGAATCTAAACTATCCATCCTGTaGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATG +
Preference number: 5 (lower is better)
Translates to: GSLEILSCESKLSIL*AVCAPEAAPGCSSM
Trigger: CATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCACAGGATGGATAGTTTAGATTCACATGACAGTATCTCCAGCGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
CDS CCA 90 bp GTGAACAACAAGGCCTCTGCCATGCTGTGGGTCTGGATGAACATCTaGACATGGTCTCACATGCAGCCTAAAAGCCATAGCCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VNNKASAMLWVWMNI*TWSHMQPKSHSQPG
Trigger: TCCTGGCTGGCTATGGCTTTTAGGCTGCATGTGAGACCATGTCCAGATGTTCATCCAGACCCACAGCATGGCAGAGGCCTTGTTGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS-3UTR CAA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCTTGCATCGTCGTTTTaGTTGGTTCTGAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSLASSF*LVLRTE
Trigger: CTCTGTTCTCAGAACCAACAAAAACGACGATGCAAG...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVNTLIP*PASAPF
Trigger: AAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGACTGTGCAGACACTaGAAGCCAGACGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRLCRH*KPDGAA
Trigger: AGCTGCGCCGTCTGGCTTCAAGTGTCTGCACAGTCT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAGACTGTGCAGACACTaGAAGCCAGACGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSRLCRH*KPDGAA
Trigger: AGCTGCGCCGTCTGGCTTCAAGTGTCTGCACAGTCT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAGGAAGCAGCAGTACTaGGGCCAGATCTCTGCGATG +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRRKQQY*GQISAM
Trigger: CATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCCT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTATTCGCACTGCAGCCTaGTTCTCATCCTCAAAAATC +
Preference number: 5 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSIRTAA*FSSSKI
Trigger: GATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAAT...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTGGCACAGGGTTATGTaGGCTGAAGGAGGCCGCATC +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEWHRVM*AEGGRI
Trigger: GATGCGGCCTCCTTCAGCCAACATAACCCTGTGCCA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TGGGCTGTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTATTAGCAGCAGGCATTaGATAGCCTTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: WAVCAPEAAPGCSSMVSSISSRH*IAFDCA
Trigger: TGCACAGTCAAAGGCTATCAAATGCCTGCTGCTAAT...ACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTCTTCAGAGAGTTTTaGCATGTCCTGGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELFREF*HVLAFP
Trigger: GGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTCCACAGGACCCTCCTaGGATCCTTTCCGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSTGPS*DPFRLR
Trigger: ACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGGA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTATGCTGGACCCCAGCTaGTCGGTGCGGCTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSMLDPS*SVRLSS
Trigger: GGACGACAGCCGCACCGACAAGCTGGGGTCCAGCAT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTGTTTCCAGTCAGGTaGAGAACCCACCACTCACTG +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLFPVR*RTHHSL
Trigger: CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGAATGGTTCCCCTCATaGAAGCTGGTCACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLEWFPS*KLVTGG
Trigger: TCCACCAGTGACCAGCTTCAATGAGGGGAACCATTC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACTAGGTCCCACTGGGTaGGTCTTTTTACTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVLGPTG*VFLLFC
Trigger: GCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS GCA 90 bp TGCCATGACCGAGGGAGAGCTCATCATCTGATTCCTCCCTGGCCATaGCACTTTCAGTCATGTCATCTTCATCCCATAAGCCATGGCACA +
Preference number: 5 (lower is better)
Translates to: CHDRGRAHHLIPPWP*HFQSCHLHPISHGT
Trigger: TGTGCCATGGCTTATGGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATGAGCTCTCCCTCGGTCATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538948.5
CDS CCA 90 bp TGGAGACTGCCAGTGAACAACAAGGCCTCTGCCATGCTGTGGGTCTaGATGAACATCTGGACATGGTCTCACATGCAGCCTAAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: WRLPVNNKASAMLWV*MNIWTWSHMQPKSH
Trigger: ATGGCTTTTAGGCTGCATGTGAGACCATGTCCAGATGTTCATCCAGACCCACAGCATGGCAGAGGCCTTGTTGTTCACTGGCAGTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACCGTCCCGTATGTCCTaGCATCGTCGTTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRPSRMS*HRRFCW
Trigger: CCAACAAAAACGACGATGCAAGGACATACGGGACGG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACCGTCCCGTATGTCCTaGCATCGTCGTTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVPSRMS*HRRFCW
Trigger: CCAACAAAAACGACGATGCAAGGACATACGGGACGG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCNTLIP*PASAPF
Trigger: AAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCCAGTCCAGTCATATTTaGCCACAGGCCTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCQSSHI*PQAWEV
Trigger: AACTTCCCAGGCCTGTGGCAAAATATGACTGGACTG...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTAGGAAGCAGCAGTACTaGGGCCAGATCTCTGCGATG +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSRKQQY*GQISAM
Trigger: CATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCCT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACTTTATGATGTTGTCATaGAAGCTGGCACCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDFMMLS*KLAPLN
Trigger: ATTCAAGGGTGCCAGCTTCAATGACAACATCATAAA...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGACGAGAAACACAGGGTaGGGCCGCACAATGAAATCT +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLTRNTG*GRTMKS
Trigger: AGATTTCATTGTGCGGCCCAACCCTGTGTTTCTCGT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATGCAGATCTCGACATaGTCACCTGCCATGATTCGC +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCMQIST*SPAMIR
Trigger: GCGAATCATGGCAGGTGACAATGTCGAGATCTGCAT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGGCACAGGGTTATGTaGGCTGAAGGAGGCCGCATC +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTWHRVM*AEGGRI
Trigger: GATGCGGCCTCCTTCAGCCAACATAACCCTGTGCCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGTTCTGTTGCCTGGCCTaGATGCGATCCATCTGTCGC +
Preference number: 5 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQFCCLA*MRSICR
Trigger: GCGACAGATGGATCGCATCAAGGCCAGGCAACAGAA...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTACCATCGGATTTCTTTTaGATTGGTTCATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVPSDFF*IGSSSR
Trigger: CCGGGAGGATGAACCAATCAAAAAGAAATCCGATGG...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRVASYS*ASLGSG
Trigger: GCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCAC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGTGGCCTCGTACTCCTaGGCCTCCCTGGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPVASYS*ASLGSG
Trigger: GCCTGAGCCCAGGGAGGCCAAGGAGTACGAGGCCAC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGGCCAGGTTGATGGACTaGAGAGAATCGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEARLMD*RESEES
Trigger: GGACTCCTCCGATTCTCTCAAGTCCATCAACCTGGC...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGACAGACGCGGCCAGGTaGATGGACTTGAGAGAATCG +
Preference number: 5 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLTDAAR*MDLRES
Trigger: CGATTCTCTCAAGTCCATCAACCTGGCCGCGTCTGT...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTGCTGTTTCGGGTGCTaGTGCTGCCTCTTTGGGATC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQCCFGC*CCLFGI
Trigger: GATCCCAAAGAGGCAGCACAAGCACCCGAAACAGCA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTGTGCACCTGAAGCAGCTCCGGGATGCTCGTCAATGGTGTCCAGTCCCGACTTTCAACTGGCTTTGTaGGGCACTCATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: VCAPEAAPGCSSMVSSPDFQLAL*GTHCEN
Trigger: ATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAA...GTCGGGACTGGACACCATTGACGAGCATCCCGGAGCTGCTTCAGGTGCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTTGGGGGACTGACTTaGTCATTGAAGACCACCAGT +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELGGLT*SLKTTS
Trigger: ACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTAGGTCCCACTGGGTaGGTCTTTTTACTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELGPTG*VFLLFC
Trigger: GCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTACTGCGTGGGCTCGCTaGATGCTAAACTGCCACTGT +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSTAWAR*MLNCHC
Trigger: ACAGTGGCAGTTTAGCATCAAGCGAGCCCACGCAGT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 90 bp AAACGTTGTATGCGATCAGCCAGTCCCAGTAGCGCAGGATGCTCTTaGTGGGTTTCAACAGCAAATCGCCCCCAAAGAGCAGGAAGTAGA +
Preference number: 5 (lower is better)
Translates to: KRCMRSASPSSAGCS*WVSTANRPQRAGSR
Trigger: TCTACTTCCTGCTCTTTGGGGGCGATTTGCTGTTGAAACCCATCAAGAGCATCCTGCGCTACTGGGACTGGCTGATCGCATACAACGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 90 bp AGGTGGGATGCCAATGCAGATGAAATACTGGAAGGTGATGATGCATaGCAGGAAGCAGCAGTACTTGGGCCAGATCTCTGCGATGGCTTT +
Preference number: 5 (lower is better)
Translates to: RWDANADEILEGDDA*QEAAVLGPDLCDGF
Trigger: AAAGCCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCCTGGCATGCATCATCACCTTCCAGTATTTCATCTGCATTGGCATCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 90 bp GCTTTTAAGTCCCTTTTCCGAGGATGCTCCCATGTTTGTGTTGGGTaGCAGAAGCACCACGCAAGTCCTGAGGAAGATGAACCCAACCTT +
Preference number: 5 (lower is better)
Translates to: AFKSLFRGCSHVCVG*QKHHASPEEDEPNL
Trigger: AAGGTTGGGTTCATCTTCCTCAGGACTTGCGTGGTGCTTCTGGCACCCAACACAAACATGGGAGCATCCTCGGAAAAGGGACTTAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583325.1
CDS CCA 90 bp CCTACACTCCGACCCCCTATCAAGTCACAAGGATCAAACCATGCATaGAACACATGGGTCACGGGAACGCCTGAATTCTGGTCAAGGATA +
Preference number: 5 (lower is better)
Translates to: PTLRPPIKSQGSNHA*NTWVTGTPEFWSRI
Trigger: TATCCTTGACCAGAATTCAGGCGTTCCCGTGACCCATGTGTTCCATGCATGGTTTGATCCTTGTGACTTGATAGGGGGTCGGAGTGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CCA 90 bp CAAGTCCTGAGGAAGATGAACCCAACCTTTCTAACAACTTCCACCTaGGCAGGAAATCAGCTGCAACAGGTGGTCTTCCTTGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: QVLRKMNPTFLTTST*AGNQLQQVVFLEVL
Trigger: CAGCACCTCAAGGAAGACCACCTGTTGCAGCTGATTTCCTGCCCAGGTGGAAGTTGTTAGAAAGGTTGGGTTCATCTTCCTCAGGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583325.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVNTLIP*PASAPF
Trigger: AAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATTGCCAATGAACTCCTaGAGCTTAGAGGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLPMNS*SLEATE
Trigger: CTCTGTGGCCTCTAAGCTCAAGGAGTTCATTGGCAA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGGGGTGGAACTGCCTCTaGAAAGAATTGGAACTGGTA +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLGWNCL*KELELV
Trigger: TACCAGTTCCAATTCTTTCAAGAGGCAGTTCCACCC...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCTGCACAAGGGGCTCTaGCAGCCAGATGCGGATCAG +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLHKGL*QPDADQ
Trigger: CTGATCCGCATCTGGCTGCAAGAGCCCCTTGTGCAG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCTCCATGGGCAGGCTaGGGTGGATGGTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSPWAG*GGWCGN
Trigger: ATTACCACACCATCCACCCAAGCCTGCCCATGGAGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAATGGTGAAAAGGATTTaGGAAGCAAGTTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVMVKRI*EASSPG
Trigger: GCCAGGAGAACTTGCTTCCAAAATCCTTTTCACCAT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATTCTTGCAGAGCTTTTaGCTCTGTGAGGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRFLQSF*LCEVLP
Trigger: AGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGAA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAGGGCTCTCCTTCCACTaGTATATCTTGAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEGLSFH*YILKFL
Trigger: GAGGAACTTCAAGATATACAAGTGGAAGGAGAGCCC...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCGCCAGACGGCGCAGCTaGGCGTACGGCAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGARRRS*AYGRAK
Trigger: TTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGGC...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAGCCACTTTATGATGTaGTCATTGAAGCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIESHFMM*SLKLAP
Trigger: GGGTGCCAGCTTCAATGACAACATCATAAAGTGGCT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCAAAGTTCAGCTCCTCTaGATGCCAGAATCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCKVQLL*MPESGK
Trigger: CTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTTT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCTCTTCAGAGAGTTTTaGCATGTCCTGGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQELFREF*HVLAFP
Trigger: GGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATTGTGAAAATAGGCTGATACCCTCCCAGGGTAATTGTGACGGAGACGTCCAGCTCTTCAGAGAGTTTTaGCATGTCCTGGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: HCENRLIPSQGNCDGDVQLFREF*HVLAFP
Trigger: GGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG...CTGGACGTCTCCGTCACAATTACCCTGGGAGGGTATCAGCCTATTTTCACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATGCTGGACCCCAGCTaGTCGGTGCGGCTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRMLDPS*SVRLSS
Trigger: GGACGACAGCCGCACCGACAAGCTGGGGTCCAGCAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAGAGCAGCAGAAATCAACACTGCTTCCTTTTaGACTGCTGTTTCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: SPSGPPGYCTWHRRAAEINTASF*TAVSGA
Trigger: AGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGTT...GATTTCTGCTGCTCTTCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAACACTGCTTCCTTTTaGACTGCTGTTTCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLNTASF*TAVSGA
Trigger: AGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGTT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAACAGAGAAGCTACTATaGGGGTCCAGGAGTTCGTGT +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVTEKLL*GSRSSC
Trigger: ACACGAACTCCTGGACCCCAATAGTAGCTTCTCTGT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAACAGAGAAGCTACTATaGGGGTCCAGGAGTTCGTGT +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRTEKLL*GSRSSC
Trigger: ACACGAACTCCTGGACCCCAATAGTAGCTTCTCTGT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTTGGGGGACTGACTTaGTCATTGAAGACCACCAGT +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLGGLT*SLKTTS
Trigger: ACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTTGGGGGACTGACTTaGTCATTGAAGACCACCAGT +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLGGLT*SLKTTS
Trigger: ACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTAGGTCCCACTGGGTaGGTCTTTTTACTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLGPTG*VFLLFC
Trigger: GCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTACTGCGTGGGCTCGCTaGATGCTAAACTGCCACTGT +
Preference number: 5 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFTAWAR*MLNCHC
Trigger: ACAGTGGCAGTTTAGCATCAAGCGAGCCCACGCAGT...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATTGGAGAGGGACGCTTaGGGAGGGTCCTGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLERDA*GGSWEA
Trigger: CGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCAA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 90 bp AGGCCGCATCAAGGTTCATGCAGATCTCGACATTGTCACCTGCCATaGTTCGCACTGCAGCCTTGTTCTCATCCTCAAAAATCTGCCGTT +
Preference number: 5 (lower is better)
Translates to: RPHQGSCRSRHCHLP*FALQPCSHPQKSAV
Trigger: AACGGCAGATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGCATGAACCTTGATGCGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 90 bp GAAGGAGGCCGCATCAAGGTTCATGCAGATCTCGACATTGTCACCTaGCATGATTCGCACTGCAGCCTTGTTCTCATCCTCAAAAATCTG +
Preference number: 5 (lower is better)
Translates to: EGGRIKVHADLDIVT*HDSHCSLVLILKNL
Trigger: CAGATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGCATGAACCTTGATGCGGCCTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACCGTCCCGTATGTCCTaGCATCGTCGTTTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTPSRMS*HRRFCW
Trigger: CCAACAAAAACGACGATGCAAGGACATACGGGACGG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAAGGTGCAATACGATGTaGAGCTTCAAGGCTCACCAA +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVRCNTM*SFKAHQ
Trigger: TTGGTGAGCCTTGAAGCTCAACATCGTATTGCACCT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTTGCCAATGAACTCCTaGAGCTTAGAGGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLPMNS*SLEATE
Trigger: CTCTGTGGCCTCTAAGCTCAAGGAGTTCATTGGCAA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAAGCATATTTTCTTCTGTaGCGAATCATCCAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKAYFLL*RIIQRV
Trigger: CACTCTTTGGATGATTCGCAACAGAAGAAAATATGC...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GCTGATGAGGAGGACATATCCATGCTGAGCATTTTACGGAGCCTAGGCCGAGCAATGGTGAAAAGGATTTaGGAAGCAAGTTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: ADEEDISMLSILRSLGRAMVKRI*EASSPG
Trigger: GCCAGGAGAACTTGCTTCCAAAATCCTTTTCACCAT...TGCTCGGCCTAGGCTCCGTAAAATGCTCAGCATGGATATGTCCTCCTCATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGTTCTTGCAGAGCTTTTaGCTCTGTGAGGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLFLQSF*LCEVLP
Trigger: AGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGAA...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATTCTTCAGCTTCCTCTaGCTCTACCTTCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEFFSFL*LYLLSL
Trigger: GAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCAGTCCAGTCATATTTaGCCACAGGCCTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQQSSHI*PQAWEV
Trigger: AACTTCCCAGGCCTGTGGCAAAATATGACTGGACTG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGCAGTCCAGTCATATTTaGCCACAGGCCTGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEQSSHI*PQAWEV
Trigger: AACTTCCCAGGCCTGTGGCAAAATATGACTGGACTG...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTTGCTGGGAATGGACTaGAGGTCTGTGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQLLGMD*RSVSSR
Trigger: CCTTGAACTCACAGACCTCAAGTCCATTCCCAGCAA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTTGCTGGGAATGGACTaGAGGTCTGTGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPLLGMD*RSVSSR
Trigger: CCTTGAACTCACAGACCTCAAGTCCATTCCCAGCAA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTAGACTGTGCAGACACTaGAAGCCAGACGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVRLCRH*KPDGAA
Trigger: AGCTGCGCCGTCTGGCTTCAAGTGTCTGCACAGTCT...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTACGAGAAACACAGGGTaGGGCCGCACAATGAAATCT +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSTRNTG*GRTMKS
Trigger: AGATTTCATTGTGCGGCCCAACCCTGTGTTTCTCGT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTCGCACTGCAGCCTaGTTCTCATCCTCAAAAATC +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCIRTAA*FSSSKI
Trigger: GATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAAT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTAGCAGCAGGCATTaGATAGCCTTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCISSRH*IAFDCA
Trigger: TGCACAGTCAAAGGCTATCAAATGCCTGCTGCTAAT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCCTGGCGTGAGTACAGCATGGTACACTGCGTGGGCTCGCTTGATGCTAAATTACAGCTTTTACAATaGTGGCCTGGAAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VPWREYSMVHCVGSLDAKLQLLQ*WPGKVQ
Trigger: CTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAA...TTTAGCATCAAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGAAACTTTCAACTGGCTTaGTTGGGCACTCATTGTGAA +
Preference number: 5 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRNFQLA*LGTHCE
Trigger: TTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTT...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACTGTTTCCAGTCAGGTaGAGAACCCACCACTCACTG +
Preference number: 5 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPLFPVR*RTHHSL
Trigger: CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACAAGGGTGGACTGCCTaGAGAACAGCATGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPQGWTA*RTAWLL
Trigger: AAGCAACCATGCTGTTCTCAAGGCAGTCCACCCTTG...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS TCA 90 bp TTCTTCAAATTCTTCTTTCTCTTCCTCTTCCTCCTCTCGCTTTTCTaGGGATTCATCAGAGGGCTCCCACCGGTACTGAGGGGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: FFKFFFLFLFLLSLF*GFIRGLPPVLRGGV
Trigger: TACTCCACCCCTCAGTACCGGTGGGAGCCCTCTGATGAATCCTCAGAAAAGCGAGAGGAGGAAGAGGAAGAGAAAGAAGAATTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTACAAAGGAGAGCCCATaGTATCGGAATGCACATGCT +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSTKESP*YRNAHA
Trigger: AGCATGTGCATTCCGATACAATGGGCTCTCCTTTGT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCACAAAGGAGAGCCCATaGTATCGGAATGCACATGCT +
Preference number: 5 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPTKESP*YRNAHA
Trigger: AGCATGTGCATTCCGATACAATGGGCTCTCCTTTGT...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGACTTGCATCGTCGTTTTaGTTGGTTCTGAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRLASSF*LVLRTE
Trigger: CTCTGTTCTCAGAACCAACAAAAACGACGATGCAAG...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGGTGCAATACGATGTaGAGCTTCAAGGCTCACCAA +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQRCNTM*SFKAHQ
Trigger: TTGGTGAGCCTTGAAGCTCAACATCGTATTGCACCT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAAGCAGGAGGATAGGGTaGGCGTGGTGGTACCACGAC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSRRIG*AWWYHD
Trigger: GTCGTGGTACCACCACGCCAACCCTATCCTCCTGCT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTCTCCATGGGCAGGCTaGGGTGGATGGTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSSPWAG*GGWCGN
Trigger: ATTACCACACCATCCACCCAAGCCTGCCCATGGAGA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTGAAAAGGATTTaGGAAGCAAGTTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRMVKRI*EASSPG
Trigger: GCCAGGAGAACTTGCTTCCAAAATCCTTTTCACCAT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGAAGAGCTTCCTTTTCTaGCAGAGCTTTTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLKSFLF*QSFLLC
Trigger: ACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCTT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGGGGCTCTCCTTCCACTaGTATATCTTGAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: IHVSHGAILRVDEVVKELGLSFH*YILKFL
Trigger: GAGGAACTTCAAGATATACAAGTGGAAGGAGAGCCC...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATTCTTCAGCTTCCTCTaGCTCTACCTTCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVFFSFL*LYLLSL
Trigger: GAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATTCTTCAGCTTCCTCTaGCTCTACCTTCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRFFSFL*LYLLSL
Trigger: GAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAATCACCAGGTGCCATTaGTTCCTTAAGTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEITRCH*FLKSDV
Trigger: AACATCAGACTTAAGGAACAAATGGCACCTGGTGAT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAGCCACTTTATGATGTaGTCATTGAAGCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQESHFMM*SLKLAP
Trigger: GGGTGCCAGCTTCAATGACAACATCATAAAGTGGCT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGCCACTTTATGATGTaGTCATTGAAGCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSHFMM*SLKLAP
Trigger: GGGTGCCAGCTTCAATGACAACATCATAAAGTGGCT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATTAGCAGCAGGCATTaGATAGCCTTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRISSRH*IAFDCA
Trigger: TGCACAGTCAAAGGCTATCAAATGCCTGCTGCTAAT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAACTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELFIFL*PGLDAI
Trigger: GATCGCATCAAGGCCAGGCAACAGAAATATAAAAAG...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTTCTCTTTGTGTCTTaGTCGGAGTGCTGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCFLFVS*SECCFR
Trigger: CCTAAAACAGCACTCCGACAAAGACACAAAGAGAAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGCCATCGGATTTCTTTTaGATTGGTTCATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: IHVSHGAILRVDEVVKELPSDFF*IGSSSR
Trigger: CCGGGAGGATGAACCAATCAAAAAGAAATCCGATGG...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATCCCGAGTTGGAACATaGCCCTTCTTAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVSRVGT*PFLISL
Trigger: CAGAGAAATTAAGAAGGGCAATGTTCCAACTCGGGA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTGCCAGGTTGATGGACTaGAGAGAATCGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVARLMD*RESEES
Trigger: GGACTCCTCCGATTCTCTCAAGTCCATCAACCTGGC...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGCTCTTTGGGATCTGTTaGAAGAAAAGCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLLFGIC*KKSWIS
Trigger: AGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAG...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTGCTGTTTCGGGTGCTaGTGCTGCCTCTTTGGGATC +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSCCFGC*CCLFGI
Trigger: GATCCCAAAGAGGCAGCACAAGCACCCGAAACAGCA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAACACTGCTTCCTTTTaGACTGCTGTTTCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQENTASF*TAVSGA
Trigger: AGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGTT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCCCCAGGACTCGCGTaGGGTAGCCACAACGGATCT +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSPGLA*GSHNGS
Trigger: AGATCCGTTGTGGCTACCCAACGCGAGTCCTGGGGA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCTCTCTTTTGCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGATAATTTTCCAGAAATaGCATAGCACCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: PSLLLLETQVGAVCPLLLIIFQK*HSTGVP
Trigger: AGGGACACCGGTGCTATGCAATTTCTGGAAAATTAT...CAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGCAAAAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAACAGAGAAGCTACTATaGGGGTCCAGGAGTTCGTGT +
Preference number: 5 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPTEKLL*GSRSSC
Trigger: ACACGAACTCCTGGACCCCAATAGTAGCTTCTCTGT...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CGAAGTAGCACACCATCTCCGAGCGGGCCACCAGGGTATTGTACATGGCATAGATTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: RSSTPSPSGPPGYCTWHRLLFPI*HPDLSF
Trigger: GAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAA...TCTATGCCATGTACAATACCCTGGTGGCCCGCTCGGAGATGGTGTGCTACTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATGGTCACTGGTGTTTTaGAACTTTCTGTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVWSLVF*NFLCCC
Trigger: GCAACAGCACAGAAAGTTCAAAAACACCAGTGACCA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGCTGTTTCCAGTCAGGTaGAGAACCCACCACTCACTG +
Preference number: 5 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLLFPVR*RTHHSL
Trigger: CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAG...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAATGGAGCGCTGTATATaGCATTGTAGCATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVMERCI*HCSISP
Trigger: TGGAGAGATGCTACAATGCAATATACAGCGCTCCAT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAACGTCCAGGGGCTGGTaGATGACCCCAGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRTSRGW*MTPATD
Trigger: ATCTGTGGCTGGGGTCATCAACCAGCCCCTGGACGT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGAAAAGTTCAGCCACCTaGATGCCAGAATCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLKSSAT*MPESGK
Trigger: CTTCCCAGATTCTGGCATCAAGGTGGCTGAACTTTT...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGCTGATGCCGGGGCCTaGGAGAGGGACGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLADAGA*ERDALG
Trigger: TCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAGC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 90 bp GAAGTCATAGACGAGAAACACAGGGTTGGGCCGCACAATGAAATCTaGGAAGTACAGCCACTTTATGATGTTGTCATTGAAGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: EVIDEKHRVGPHNEI*EVQPLYDVVIEAGT
Trigger: GGTGCCAGCTTCAATGACAACATCATAAAGTGGCTGTACTTCCCAGATTTCATTGTGCGGCCCAACCCTGTGTTTCTCGTCTATGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGGGTGGAACTGCCTCTaGAAAGAATTGGAACTGGTA +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTGWNCL*KELELV
Trigger: TACCAGTTCCAATTCTTTCAAGAGGCAGTTCCACCC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTTCTCCATGGGCAGGCTaGGGTGGATGGTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLSPWAG*GGWCGN
Trigger: ATTACCACACCATCCACCCAAGCCTGCCCATGGAGA...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGATGGTGAAAAGGATTTaGGAAGCAAGTTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQMVKRI*EASSPG
Trigger: GCCAGGAGAACTTGCTTCCAAAATCCTTTTCACCAT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAGCTGGTACAACATTTaGCAGACGATGATCACACAC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQSWYNI*QTMITH
Trigger: GTGTGTGATCATCGTCTGCAAAATGTTGTACCAGCT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTAGGAAGCAGCAGTACTaGGGCCAGATCTCTGCGATG +
Preference number: 5 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLRKQQY*GQISAM
Trigger: CATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCCT...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTTATGATGTTGTCATaGAAGCTGGCACCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCFMMLS*KLAPLN
Trigger: ATTCAAGGGTGCCAGCTTCAATGACAACATCATAAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTATTCGCACTGCAGCCTaGTTCTCATCCTCAAAAATC +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSIRTAA*FSSSKI
Trigger: GATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAAT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGTAATCACAAAAACGTaGTATGCGATCAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQVITKT*YAISQS
Trigger: GGACTGGCTGATCGCATACAACGTTTTTGTGATTAC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATCAACCAACAACTATaGTGCACCAATGTTCCAATG +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCINQQL*CTNVPM
Trigger: CATTGGAACATTGGTGCACAATAGTTGTTGGTTGAT...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAATCAACCAACAACTATaGTGCACCAATGTTCCAATG +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEINQQL*CTNVPM
Trigger: CATTGGAACATTGGTGCACAATAGTTGTTGGTTGAT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAAAGTTCAGCTCCTCTaGATGCCAGAATCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTKVQLL*MPESGK
Trigger: CTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTTT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATTACAGCTTTTACAATaGTGGCCTGGAAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIELQLLQ*WPGKVQ
Trigger: CTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATC +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLFIFL*PGLDAI
Trigger: GATCGCATCAAGGCCAGGCAACAGAAATATAAAAAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGTCCCGAGTTGGAACATaGCCCTTCTTAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLSRVGT*PFLISL
Trigger: CAGAGAAATTAAGAAGGGCAATGTTCCAACTCGGGA...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAACTGCCATACGGTTCTaGCCTGCAGAGTCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRTAIRF*PAESSC
Trigger: GCAGGACGACTCTGCAGGCAAGAACCGTATGGCAGT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTACTCTTTGGGATCTGTTaGAAGAAAAGCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLFGIC*KKSWIS
Trigger: AGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAG...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAACACTGCTTCCTTTTaGACTGCTGTTTCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTNTASF*TAVSGA
Trigger: AGCACCCGAAACAGCAGTCAAAAAGGAAGCAGTGTT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAATTTCAACTGGCTTTGTaGGGCACTCATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEFQLAL*GTHCEN
Trigger: ATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAA...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAACTTTCAACTGGCTTaGTTGGGCACTCATTGTGAA +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRNFQLA*LGTHCE
Trigger: TTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCTTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: HLVSSQQLPQWGWSAVYCLLFPI*HPDLSF
Trigger: GAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAA...GCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp AAGGCTCATCTAGTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTAAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: KAHLVSSQQLPQWGWSAVKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...TACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGACTAGATGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTCTGTTTCCAGTCAGGTaGAGAACCCACCACTCACTG +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSLFPVR*RTHHSL
Trigger: CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAG...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCCTTGGGGGACTGACTTaGTCATTGAAGACCACCAGT +
Preference number: 5 (lower is better)
Translates to: LRVRIVYSVSSQVENPPLLGGLT*SLKTTS
Trigger: ACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG...GAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCAACAGTGCCTTAACTaGCAAGGTAGCTTTTACTGC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQQQCLN*QGSFYC
Trigger: GCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTTG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTACCCCAGCCACAGATTaGATCAAAGACATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSTPATD*IKDMKR
Trigger: TCTCTTCATGTCTTTGATCAAATCTGTGGCTGGGGT...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAATCAGTAATCCAGGCTaGATAAACAAACTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEISNPG*INKLCS
Trigger: GCTGCAAAGTTTGTTTATCAAGCCTGGATTACTGAT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 90 bp ACAAGGATCAAACCATGCATGGAACACATGGGTCACGGGAACGCCTaGATTCTGGTCAAGGATATAAGGGTTAGAGTCGATGAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: TRIKPCMEHMGHGNA*ILVKDIRVRVDEVV
Trigger: TACAACCTCATCGACTCTAACCCTTATATCCTTGACCAGAATTCAGGCGTTCCCGTGACCCATGTGTTCCATGCATGGTTTGATCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS GCA 90 bp ACTGTGCAGGCCAGGCTGAAAGCCTGGATCAACCAACAACTATTGTaGACCAATGTTCCAATGTATCCACATGCTCCTATTGACAGGATA +
Preference number: 5 (lower is better)
Translates to: TVQARLKAWINQQLL*TNVPMYPHAPIDRI
Trigger: TATCCTGTCAATAGGAGCATGTGGATACATTGGAACATTGGTGCACAATAGTTGTTGGTTGATCCAGGCTTTCAGCCTGGCCTGCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGGGGTGGAACTGCCTCTaGAAAGAATTGGAACTGGTA +
Preference number: 5 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLGWNCL*KELELV
Trigger: TACCAGTTCCAATTCTTTCAAGAGGCAGTTCCACCC...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCTACAAGCCAGGGCTTaGTCCTCTTCTTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPLQARA*SSSLVP
Trigger: GGGGACCAAAGAAGAGGACAAAGCCCTGGCTTGTAG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATCTCCATGGGCAGGCTaGGGTGGATGGTGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRSPWAG*GGWCGN
Trigger: ATTACCACACCATCCACCCAAGCCTGCCCATGGAGA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAGCATATTTTCTTCTGTaGCGAATCATCCAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRAYFLL*RIIQRV
Trigger: CACTCTTTGGATGATTCGCAACAGAAGAAAATATGC...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCAAGAGCTTCCTTTTCTaGCAGAGCTTTTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPKSFLF*QSFLLC
Trigger: ACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCTT...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGATTTATGATGTTGTCATaGAAGCTGGCACCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRFMMLS*KLAPLN
Trigger: ATTCAAGGGTGCCAGCTTCAATGACAACATCATAAA...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAGTAATCACAAAAACGTaGTATGCGATCAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTVITKT*YAISQS
Trigger: GGACTGGCTGATCGCATACAACGTTTTTGTGATTAC...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTAATCCACATGCTCCTATaGACAGGATATTTTTCATCG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVIHMLL*TGYFSS
Trigger: CGATGAAAAATATCCTGTCAATAGGAGCATGTGGAT...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATCAACCAACAACTATaGTGCACCAATGTTCCAATG +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRINQQL*CTNVPM
Trigger: CATTGGAACATTGGTGCACAATAGTTGTTGGTTGAT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCTCATCACAGCAGCTTCCCCAGTGGGGATGGAGCGCTGTATATTGCATTGTATTACAGCTTTTACAATaGTGGCCTGGAAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VSSQQLPQWGWSAVYCIVLQLLQ*WPGKVQ
Trigger: CTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAA...TACAATGCAATATACAGCGCTCCATCCCCACTGGGGAAGCTGCTGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTCTGTTGCCTGGCCTaGATGCGATCCATCTGTCGC +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFCCLA*MRSICR
Trigger: GCGACAGATGGATCGCATCAAGGCCAGGCAACAGAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQLFIFL*PGLDAI
Trigger: GATCGCATCAAGGCCAGGCAACAGAAATATAAAAAG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ATACACGTCAGTCACGGCGCTATACTCCGGGTGGATGAGGTTGTAAAAGAACTGCTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATC +
Preference number: 5 (lower is better)
Translates to: IHVSHGAILRVDEVVKELLFIFL*PGLDAI
Trigger: GATCGCATCAAGGCCAGGCAACAGAAATATAAAAAG...CAGTTCTTTTACAACCTCATCCACCCGGAGTATAGCGCCGTGACTGACGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATCTCTTCAGAGAGTTTTaGCATGTCCTGGCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: TVGELGLISLNRSTVIRYLFREF*HVLAFP
Trigger: GGGGAAGGCCAGGACATGCAAAAACTCTCTGAAGAG...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp CATCATCTGATTCCTCCCTGGCCATGCCACTTTCAGTCATGTCATCTTCATCCCTTTCTCTTTGTGTCTTaGTCGGAGTGCTGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: HHLIPPWPCHFQSCHLHPFLFVS*SECCFR
Trigger: CCTAAAACAGCACTCCGACAAAGACACAAAGAGAAA...GGGATGAAGATGACATGACTGAAAGTGGCATGGCCAGGGAGGAATCAGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATCCCGAGTTGGAACATaGCCCTTCTTAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTSRVGT*PFLISL
Trigger: CAGAGAAATTAAGAAGGGCAATGTTCCAACTCGGGA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAATGCTGTTTCGGGTGCTaGTGCTGCCTCTTTGGGATC +
Preference number: 5 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKCCFGC*CCLFGI
Trigger: GATCCCAAAGAGGCAGCACAAGCACCCGAAACAGCA...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAATGGTTCCCCTCATTGAAAAAGCTTGTATAAATTaGTTAAAGCTCTGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: HVCLHRRPQPSRMVPLIEKACIN*LKLCWS
Trigger: GGACCAGCAGAGCTTTAACAAATTTATACAAGCTTT...TTCAATGAGGGGAACCATTCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTACAGAGAAGCTACTATaGGGGTCCAGGAGTTCGTGT +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSTEKLL*GSRSSC
Trigger: ACACGAACTCCTGGACCCCAATAGTAGCTTCTCTGT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 5 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATGGTCACTGGTGTTTTaGAACTTTCTGTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTWSLVF*NFLCCC
Trigger: GCAACAGCACAGAAAGTTCAAAAACACCAGTGACCA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGGATATCAGCTCCTTTaGTCTACCTATCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQGYQLL*STYQKR
Trigger: TCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTTAGTTCCCTCTCTTTaGCTCCTAGAAACACAGGTA +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLVPSL*LLETQV
Trigger: TACCTGTGTTTCTAGGAGCAAAAGAGAGGGAACTAA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACGTCCAGGGGCTGGTaGATGACCCCAGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTSRGW*MTPATD
Trigger: ATCTGTGGCTGGGGTCATCAACCAGCCCCTGGACGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTATGTCTCTGGAAGAATaGGACCCCGGGCTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: FMIRRETHCILCGYQDLLMSLEE*DPGLKD
Trigger: GTCTTTGAGCCCGGGGTCCAATTCTTCCAGAGACAT...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAACATAAGCCGAGAGATTaGCAGGAAAGTGATGTGGAC +
Preference number: 5 (lower is better)
Translates to: WLEGCATCGHWNLECLFEHKPRD*QESDVD
Trigger: GTCCACATCACTTTCCTGCAAATCTCTCGGCTTATG...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS GCA 90 bp AGGACTTTCATGATGTCCTGCTCATCTTCTTCTTCAGCTTCCTCTTaGTCTACCTTCTTTCTCTCTTGCTTCTCTTCCTTCGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RTFMMSCSSSSSASS*STFFLSCFSSFASS
Trigger: AGAGGAAGCGAAGGAAGAGAAGCAAGAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAAGAAGATGAGCAGGACATCATGAAAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTACAAAGGAGAGCCCATaGTATCGGAATGCACATGCT +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSTKESP*YRNAHA
Trigger: AGCATGTGCATTCCGATACAATGGGCTCTCCTTTGT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGGCATATTTTCTTCTGTaGCGAATCATCCAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQAYFLL*RIIQRV
Trigger: CACTCTTTGGATGATTCGCAACAGAAGAAAATATGC...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAAAGAGCTTCCTTTTCTaGCAGAGCTTTTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTKSFLF*QSFLLC
Trigger: ACAGAGCAAAAAGCTCTGCAAGAAAAGGAAGCTCTT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTAAAGTTCAGCTCCTCTaGATGCCAGAATCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSKVQLL*MPESGK
Trigger: CTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTTT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGCATGGCACTTCAAAATaGATCGATGAAAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQHGTSK*IDERTE
Trigger: CTCTGTTCTTTCATCGATCAATTTTGAAGTGCCATG...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TTCTTTTTGATTGGTTCATCCTCCCGGTCTTCCCATTCCACAGGACCCTCCTTGCATGGCACTTCAAAATaGATCGATGAAAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: FFLIGSSSRSSHSTGPSLHGTSK*IDERTE
Trigger: CTCTGTTCTTTCATCGATCAATTTTGAAGTGCCATG...CAAGGAGGGTCCTGTGGAATGGGAAGACCGGGAGGATGAACCAATCAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTTTCAACTGGCTTTGTaGGGCACTCATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQFQLAL*GTHCEN
Trigger: ATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGACCGCAGCCCTCCAGAAAAGCTTGTATAAATTaGTTAAAGCTCTGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LFTLLPHVCLHRRPQPSRKACIN*LKLCWS
Trigger: GGACCAGCAGAGCTTTAACAAATTTATACAAGCTTT...TCTGGAGGGCTGCGGTCTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAATAATTTTCCAGAAATaGCATAGCACCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTIIFQK*HSTGVP
Trigger: AGGGACACCGGTGCTATGCAATTTCTGGAAAATTAT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GCTCCTAGAAACACAGGTAGGAGCTGTCTGCCCCCTATTGCTGTTGCATTTTCTTTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: APRNTGRSCLPPIAVAFSLLFPI*HPDLSF
Trigger: GAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAA...AGAAAATGCAACAGCAATAGGGGGCAGACAGCTCCTACCTGTGTTTCTAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGTTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQLLFPI*HPDLSF
Trigger: GAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAA...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGTTTTCTCTAGTCCATTaGATCATTGTCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQEFSLVH*IIVSGE
Trigger: CTCACCAGAGACAATGATCAAATGGACTAGAGAAAA...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGAATGGTTCCCCTCATaGAAGCTGGTCACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRREWFPS*KLVTGG
Trigger: TCCACCAGTGACCAGCTTCAATGAGGGGAACCATTC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS CCA 90 bp AAGGAACAGTTAACAGAGAAGTTCTCAGGCTTAATGGTTTGGAGCTaGTACAACATTTTGCAGACGATGATCACACACGTCCAGACTGTG +
Preference number: 5 (lower is better)
Translates to: KEQLTEKFSGLMVWS*YNILQTMITHVQTV
Trigger: CACAGTCTGGACGTGTGTGATCATCGTCTGCAAAATGTTGTACCAGCTCCAAACCATTAAGCCTGAGAACTTCTCTGTTAACTGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKNTLIP*PASAPF
Trigger: AAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTT...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp TCACGGACAAATTTCCCAATCACAAGGACAACTGAAGCATATAATCCCATAATACTACAAGCCAGGGCTTaGTCCTCTTCTTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SRTNFPITRTTEAYNPIILQARA*SSSLVP
Trigger: GGGGACCAAAGAAGAGGACAAAGCCCTGGCTTGTAG...TATTATGGGATTATATGCTTCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCTACAAGCCAGGGCTTaGTCCTCTTCTTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLQARA*SSSLVP
Trigger: GGGGACCAAAGAAGAGGACAAAGCCCTGGCTTGTAG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTCTTGCAGAGCTTTTaGCTCTGTGAGGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFLQSF*LCEVLP
Trigger: AGGCAGCACCTCACAGAGCAAAAAGCTCTGCAAGAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATTGCTGGGAATGGACTaGAGGTCTGTGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLLGMD*RSVSSR
Trigger: CCTTGAACTCACAGACCTCAAGTCCATTCCCAGCAA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTGCTGGGAATGGACTaGAGGTCTGTGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPLLGMD*RSVSSR
Trigger: CCTTGAACTCACAGACCTCAAGTCCATTCCCAGCAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTATTCGCACTGCAGCCTaGTTCTCATCCTCAAAAATC +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSIRTAA*FSSSKI
Trigger: GATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAAT...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATGCAGATCTCGACATaGTCACCTGCCATGATTCGC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRMQIST*SPAMIR
Trigger: GCGAATCATGGCAGGTGACAATGTCGAGATCTGCAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATGCAGATCTCGACATaGTCACCTGCCATGATTCGC +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPMQIST*SPAMIR
Trigger: GCGAATCATGGCAGGTGACAATGTCGAGATCTGCAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAGTAGTGAAACTGTCCACTGTTGCCAGAAATAGGACCCAGGTAAATTTCAAAATGCAGATCTCGACATaGTCACCTGCCATGATTCGC +
Preference number: 5 (lower is better)
Translates to: QVVKLSTVARNRTQVNFKMQIST*SPAMIR
Trigger: GCGAATCATGGCAGGTGACAATGTCGAGATCTGCAT...TTTGAAATTTACCTGGGTCCTATTTCTGGCAACAGTGGACAGTTTCACTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACAATCCACATGCTCCTATaGACAGGATATTTTTCATCG +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTIHMLL*TGYFSS
Trigger: CGATGAAAAATATCCTGTCAATAGGAGCATGTGGAT...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGTTCTGTTGCCTGGCCTaGATGCGATCCATCTGTCGC +
Preference number: 5 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLFCCLA*MRSICR
Trigger: GCGACAGATGGATCGCATCAAGGCCAGGCAACAGAA...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTCCACAGGACCCTCCTaGGATCCTTTCCGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: TFCAVACYHFSDILSSNISTGPS*DPFRLR
Trigger: ACGAAGGCGGAAAGGATCCAAGGAGGGTCCTGTGGA...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGTTTGCACAGGAGAATTGGAAGAAATACTaGACTACAATTGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: VPLGWSFYSSASCLFAQENWKKY*TTIATS
Trigger: TGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATT...CTCCTGTGCAAACAGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACACATGGCACTTCAAAATaGATCGATGAAAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTHGTSK*IDERTE
Trigger: CTCTGTTCTTTCATCGATCAATTTTGAAGTGCCATG...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGCCAGGTTGATGGACTaGAGAGAATCGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLARLMD*RESEES
Trigger: GGACTCCTCCGATTCTCTCAAGTCCATCAACCTGGC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACAGACGCGGCCAGGTaGATGGACTTGAGAGAATCG +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTDAAR*MDLRES
Trigger: CGATTCTCTCAAGTCCATCAACCTGGCCGCGTCTGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTGACTCCTCTTCTGTTTCTCTTAGGGACGGGGCCCATAAATGATTCCTTCACATTTCAACTGGCTTTGTaGGGCACTCATTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LTPLLFLLGTGPINDSFTFQLAL*GTHCEN
Trigger: ATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAA...TGTGAAGGAATCATTTATGGGCCCCGTCCCTAAGAGAAACAGAAGAGGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TCCAGAATGGTTCCCCTCATTGAAGCTGGTCACTGGTGGACCATAACAAAGCAGAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: SRMVPLIEAGHWWTITKQKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...CTGCTTTGTTATGGTCCACCAGTGACCAGCTTCAATGAGGGGAACCATTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ATTGTACATGGCATAGAAGAGCAGCAGAAATCGGGGCTGCCCCACGTAGAATTTTTTTCTCTAGTCCATTaGATCATTGTCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: IVHGIEEQQKSGLPHVEFFSLVH*IIVSGE
Trigger: CTCACCAGAGACAATGATCAAATGGACTAGAGAAAA...AAATTCTACGTGGGGCAGCCCCGATTTCTGCTGCTCTTCTATGCCATGTACAAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATGGTTTTTGCTGTTCATaGGTCGTCTCTGAGCATCAG +
Preference number: 5 (lower is better)
Translates to: TVGELGLISLNRSTVIRYGFCCS*VVSEHQ
Trigger: CTGATGCTCAGAGACGACCAATGAACAGCAAAAACC...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAACATCACGTGGTCGTTaGGGAAAACACAGACTATTA +
Preference number: 5 (lower is better)
Translates to: WLEGCATCGHWNLECLFETSRGR*GKHRLL
Trigger: TAATAGTCTGTGTTTTCCCAAACGACCACGTGATGT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CCA 90 bp TTCTCTCTTGCTTCTCTTCCTTCGCTTCCTCTTCTTCCTCCTCTTTaGGCTCTCCTTCCACTTGTATATCTTGAAGTTCCTCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: FSLASLPSLPLLPPL*ALLPLVYLEVPHLF
Trigger: AAAAAGATGAGGAACTTCAAGATATACAAGTGGAAGGAGAGCCCAAAGAGGAGGAAGAAGAGGAAGCGAAGGAAGAGAAGCAAGAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAGGTGCAATACGATGTaGAGCTTCAAGGCTCACCAA +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPRCNTM*SFKAHQ
Trigger: TTGGTGAGCCTTGAAGCTCAACATCGTATTGCACCT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGGGTGGAACTGCCTCTaGAAAGAATTGGAACTGGTA +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPGWNCL*KELELV
Trigger: TACCAGTTCCAATTCTTTCAAGAGGCAGTTCCACCC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCAGCTGGTACAACATTTaGCAGACGATGATCACACAC +
Preference number: 5 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGSWYNI*QTMITH
Trigger: GTGTGTGATCATCGTCTGCAAAATGTTGTACCAGCT...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATAAAGTTCAGCTCCTCTaGATGCCAGAATCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KSEASIHEDTQWVNWALYKVQLL*MPESGK
Trigger: CTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTTT...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTTCTCTTTGTGTCTTaGTCGGAGTGCTGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFLFVS*SECCFR
Trigger: CCTAAAACAGCACTCCGACAAAGACACAAAGAGAAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGCCATCGGATTTCTTTTaGATTGGTTCATCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPPSDFF*IGSSSR
Trigger: CCGGGAGGATGAACCAATCAAAAAGAAATCCGATGG...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAGGGCCTGAGAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCAAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: QGLRVRIVYSVSSQVENPKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...TGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTCTCAGGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp GAAGAACATCCAGAAGTGAATTCCGAACACAAGAATGACCTGGAAGATGACCTTACCCCAGCCACAGATTaGATCAAAGACATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: EEHPEVNSEHKNDLEDDLTPATD*IKDMKR
Trigger: TCTCTTCATGTCTTTGATCAAATCTGTGGCTGGGGT...AAGGTCATCTTCCAGGTCATTCTTGTGTTCGGAATTCACTTCTGGATGTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGAGTGCCTTTTTGAAATaGGGGAGGAGGCGTAGTAAG +
Preference number: 5 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLSAFLK*GRRRSK
Trigger: CTTACTACGCCTCCTCCCCAATTTCAAAAAGGCACT...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATCTCTTACACACGTGTTaGTTAGCTCAGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: KSEASIHEDTQWVNWALYLLHTC*LAQMAN
Trigger: GTTCGCCATCTGAGCTAACAAACACGTGTGTAAGAG...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTGCCAATGAACTCCTaGAGCTTAGAGGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLPMNS*SLEATE
Trigger: CTCTGTGGCCTCTAAGCTCAAGGAGTTCATTGGCAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGAGCTGGTACAACATTTaGCAGACGATGATCACACAC +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPSWYNI*QTMITH
Trigger: GTGTGTGATCATCGTCTGCAAAATGTTGTACCAGCT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACGAGAAACACAGGGTaGGGCCGCACAATGAAATCT +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTRNTG*GRTMKS
Trigger: AGATTTCATTGTGCGGCCCAACCCTGTGTTTCTCGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATTAGCAGCAGGCATTaGATAGCCTTTGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRISSRH*IAFDCA
Trigger: TGCACAGTCAAAGGCTATCAAATGCCTGCTGCTAAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAGTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGAAAGCTTGTATAAATTaGTTAAAGCTCTGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EFGLYILFPVRLRTHHSLKACIN*LKLCWS
Trigger: GGACCAGCAGAGCTTTAACAAATTTATACAAGCTTT...CAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCATAATTTTCCAGAAATaGCATAGCACCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGIIFQK*HSTGVP
Trigger: AGGGACACCGGTGCTATGCAATTTCTGGAAAATTAT...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTGGTCACTGGTGTTTTaGAACTTTCTGTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPWSLVF*NFLCCC
Trigger: GCAACAGCACAGAAAGTTCAAAAACACCAGTGACCA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTCTGCCTCATGTCTTTTTCTCTAGTCCATTaGATCATTGTCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: QSILGPTGLVFLLFCLMSFSLVH*IIVSGE
Trigger: CTCACCAGAGACAATGATCAAATGGACTAGAGAAAA...AGACATGAGGCAGAAGAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGACAACAGTGCCTTAACTaGCAAGGTAGCTTTTACTGC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRQQCLN*QGSFYC
Trigger: GCAGTAAAAGCTACCTTGCAAGTTAAGGCACTGTTG...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATGGAGCGCTGTATATaGCATTGTAGCATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRMERCI*HCSISP
Trigger: TGGAGAGATGCTACAATGCAATATACAGCGCTCCAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAAAGCAATAATGCAATCTaGTGTGTGTACATAGGTATG +
Preference number: 5 (lower is better)
Translates to: WLEGCATCGHWNLECLFESNNAI*CVYIGM
Trigger: CATACCTATGTACACACACAAGATTGCATTATTGCT...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp TGGCTTGAAGGCTGTGCCACATGTGGGCATTGGAATTTAGAGTGCCTTTTTGAATTTTATCCTCAGAACTaGGCCTTCTGTTTCAGATAT +
Preference number: 5 (lower is better)
Translates to: WLEGCATCGHWNLECLFEFYPQN*AFCFRY
Trigger: ATATCTGAAACAGAAGGCCAAGTTCTGAGGATAAAA...TTCAAAAAGGCACTCTAAATTCCAATGCCCACATGTGGCACAGCCTTCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATTACTGGGTCCAGGCCTaGGGAAATAAATGCAATACA +
Preference number: 5 (lower is better)
Translates to: KSEASIHEDTQWVNWALYYWVQA*GNKCNT
Trigger: TGTATTGCATTTATTTCCCAAGGCCTGGACCCAGTA...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS TCA 90 bp CACCCAGACTTAAGTTTTGGGTGGGCTGATGGTCCACAAAGAATTTaGGTTTCCTTCCAGTTCTGCTACTGTTATGTCTTCTTTTTCATA +
Preference number: 5 (lower is better)
Translates to: HPDLSFGWADGPQRI*VSFQFCYCYVFFFI
Trigger: TATGAAAAAGAAGACATAACAGTAGCAGAACTGGAAGGAAACTCAAATTCTTTGTGGACCATCAGCCCACCCAAAACTTAAGTCTGGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581680.1
CDS GCA 90 bp CCTACTGTGGTTCTGTTCAGCCTGATGATAGGACAAATGTTCACTTaGCTCTTTCACAGAAACCCAGATAATGTAAGAGGAAACGATTTT +
Preference number: 5 (lower is better)
Translates to: PTVVLFSLMIGQMFT*LFHRNPDNVRGNDF
Trigger: AAAATCGTTTCCTCTTACATTATCTGGGTTTCTGTGAAAGAGGCAAGTGAACATTTGTCCTATCATCAGGCTGAACAGAACCACAGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578145.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACAAAGGAGAGCCCATaGTATCGGAATGCACATGCT +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTKESP*YRNAHA
Trigger: AGCATGTGCATTCCGATACAATGGGCTCTCCTTTGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGGGCTCTCCTTCCACTaGTATATCTTGAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLGLSFH*YILKFL
Trigger: GAGGAACTTCAAGATATACAAGTGGAAGGAGAGCCC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATCACCAGGTGCCATTaGTTCCTTAAGTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPITRCH*FLKSDV
Trigger: AACATCAGACTTAAGGAACAAATGGCACCTGGTGAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAATCACCAGGTGCCATTaGTTCCTTAAGTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRITRCH*FLKSDV
Trigger: AACATCAGACTTAAGGAACAAATGGCACCTGGTGAT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp TTCTTAATTTCTCTGGTCAGCATGCATCGTTCAATTCTCAGAACTGTAGATATAACGAGAAACACAGGGTaGGGCCGCACAATGAAATCT +
Preference number: 5 (lower is better)
Translates to: FLISLVSMHRSILRTVDITRNTG*GRTMKS
Trigger: AGATTTCATTGTGCGGCCCAACCCTGTGTTTCTCGT...TATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp CCCAAATTGGAAGAAATACTTGACTACAATTGCCACCTCAGTATAGACGATGGCATCAACCAACAACTATaGTGCACCAATGTTCCAATG +
Preference number: 5 (lower is better)
Translates to: PKLEEILDYNCHLSIDDGINQQL*CTNVPM
Trigger: CATTGGAACATTGGTGCACAATAGTTGTTGGTTGAT...GCCATCGTCTATACTGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATCTTTTTATATTTCTGTaGCCTGGCCTTGATGCGATC +
Preference number: 5 (lower is better)
Translates to: KSEASIHEDTQWVNWALYLFIFL*PGLDAI
Trigger: GATCGCATCAAGGCCAGGCAACAGAAATATAAAAAG...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTTCTCTTTGTGTCTTaGTCGGAGTGCTGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFLFVS*SECCFR
Trigger: CCTAAAACAGCACTCCGACAAAGACACAAAGAGAAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAAACTTTCAACTGGCTTaGTTGGGCACTCATTGTGAA +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRNFQLA*LGTHCE
Trigger: TTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATAATTTTCCAGAAATaGCATAGCACCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPIIFQK*HSTGVP
Trigger: AGGGACACCGGTGCTATGCAATTTCTGGAAAATTAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTCTTGGGGGACTGACTTaGTCATTGAAGACCACCAGT +
Preference number: 5 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFLGGLT*SLKTTS
Trigger: ACTGGTGGTCTTCAATGACAAAGTCAGTCCCCCAAG...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGGGATATCAGCTCCTTTaGTCTACCTATCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPGYQLL*STYQKR
Trigger: TCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCC...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAGGATATCAGCTCCTTTaGTCTACCTATCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRGYQLL*STYQKR
Trigger: TCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCC...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGATTAGTTCCCTCTCTTTaGCTCCTAGAAACACAGGTA +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRLVPSL*LLETQV
Trigger: TACCTGTGTTTCTAGGAGCAAAAGAGAGGGAACTAA...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp ACAGTGGGTGAATTGGGCCTTATATCCTTGAACAGAAGCACTGTCATTCGTTATATAGTTTTCTGGTTTTaGCTGTTCATTGGTCGTCTC +
Preference number: 5 (lower is better)
Translates to: TVGELGLISLNRSTVIRYIVFWF*LFIGRL
Trigger: GAGACGACCAATGAACAGCAAAAACCAGAAAACTAT...ATAACGAATGACAGTGCTTCTGTTCAAGGATATAAGGCCCAATTCACCCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp GTTCGGATTGTATATTCTGTTTCCAGTCAGGTTGAGAACCCACCACTCACTGTTTTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: VRIVYSVSSQVENPPLTVLLFPI*HPDLSF
Trigger: AAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAA...AACAGTGAGTGGTGGGTTCTCAACCTGACTGGAAACAGAATATACAATCCGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581680.1
CDS TCA 90 bp GCACAATTAATAAGTCCATCATCTAGATGTAGTCTTGTAATGTCATaGAAGATAGTTCTAGACACAGGGGCCGTCAGGTTATTTCGACCT +
Preference number: 5 (lower is better)
Translates to: AQLISPSSRCSLVMS*KIVLDTGAVRLFRP
Trigger: AGGTCGAAATAACCTGACGGCCCCTGTGTCTAGAACTATCTTTCATGACATTACAAGACTACATCTAGATGATGGACTTATTAATTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCGCATCGTCGTTTTTGTaGGTTCTGAGAACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLASSFL*VLRTEE
Trigger: TTCCTCTGTTCTCAGAACCAACAAAAACGACGATGC...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCTTGCATCGTCGTTTTaGTTGGTTCTGAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLASSF*LVLRTE
Trigger: CTCTGTTCTCAGAACCAACAAAAACGACGATGCAAG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTAGGTGCAATACGATGTaGAGCTTCAAGGCTCACCAA +
Preference number: 5 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFRCNTM*SFKAHQ
Trigger: TTGGTGAGCCTTGAAGCTCAACATCGTATTGCACCT...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTTATGATGTTGTCATaGAAGCTGGCACCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFMMLS*KLAPLN
Trigger: ATTCAAGGGTGCCAGCTTCAATGACAACATCATAAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGATCCACATGCTCCTATaGACAGGATATTTTTCATCG +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPIHMLL*TGYFSS
Trigger: CGATGAAAAATATCCTGTCAATAGGAGCATGTGGAT...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GAAGGATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTTTTCTCTAGTCCATTaGATCATTGTCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: EGYQLLLSTYQKRNKPFPFSLVH*IIVSGE
Trigger: CTCACCAGAGACAATGATCAAATGGACTAGAGAAAA...CGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCACCCCAGCCACAGATTaGATCAAAGACATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLTPATD*IKDMKR
Trigger: TCTCTTCATGTCTTTGATCAAATCTGTGGCTGGGGT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCATGCCACATGTGGGCATaGGAATTTAGAGTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSCHMWA*EFRVPF
Trigger: AAAAGGCACTCTAAATTCCAATGCCCACATGTGGCA...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp GCACAGTTTACTTGTGACTTGATAGAAATAGGCATTTGTGCACTGCATTTACCATTAGAAAATTATGTCTaGGGAGAGAGAGGCCAACGT +
Preference number: 5 (lower is better)
Translates to: AQFTCDLIEIGICALHLPLENYV*GERGQR
Trigger: ACGTTGGCCTCTCTCTCCCAAGACATAATTTTCTAA...TGGTAAATGCAGTGCACAAATGCCTATTTCTATCAAGTCACAAGTAAACTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp AAATCTGAAGCCTCCATTCATGAAGATACACAGTGGGTGAATTGGGCCTTATATGATAGAAATAGGCATTaGTGCACTGCATTTACCAGA +
Preference number: 5 (lower is better)
Translates to: KSEASIHEDTQWVNWALYDRNRH*CTAFTR
Trigger: TCTGGTAAATGCAGTGCACAAATGCCTATTTCTATC...ATATAAGGCCCAATTCACCCACTGTGTATCTTCATGAATGGAGGCTTCAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTCTAAGAAATAGCTGTTaGAAAGCCCAGTTACTCAAA +
Preference number: 5 (lower is better)
Translates to: FMIRRETHCILCGYQDLLLRNSC*KAQLLK
Trigger: TTTGAGTAACTGGGCTTTCAAACAGCTATTTCTTAG...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp TTTATGATCAGGAGGGAAACACACTGCATTCTATGTGGCTATCAGGATCTGCTTCAAGCAGTGGTAACATaGATTTTACCATTAGAAACC +
Preference number: 5 (lower is better)
Translates to: FMIRRETHCILCGYQDLLQAVVT*ILPLET
Trigger: GGTTTCTAATGGTAAAATCAATGTTACCACTGCTTG...AAGCAGATCCTGATAGCCACATAGAATGCAGTGTGTTTCCCTCCTGATCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp AATAATGCAATCTTGTGTGTGTACATAGGTATGGAAGTAGGAAATCTGTCCCTATACACAGTGGGTGAATaGGGCCTTATATCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: NNAILCVYIGMEVGNLSLYTVGE*GLISLN
Trigger: GTTCAAGGATATAAGGCCCAATTCACCCACTGTGTA...TAGGGACAGATTTCCTACTTCCATACCTATGTACACACACAAGATTGCATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCCTCTTTGGGATCTGTTaGAAGAAAAGCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLFGIC*KKSWIS
Trigger: AGAGATCCAGCTTTTCTTCAAACAGATCCCAAAGAG...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAACTTTCAACTGGCTTaGTTGGGCACTCATTGTGAA +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLNFQLA*LGTHCE
Trigger: TTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GATATCAGCTCCTTTTGTCTACCTATCAGAAGAGAAACAAACCATTTCCGTCGAAAAGCTTGTATAAATTaGTTAAAGCTCTGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: DISSFCLPIRRETNHFRRKACIN*LKLCWS
Trigger: GGACCAGCAGAGCTTTAACAAATTTATACAAGCTTT...TCGACGGAAATGGTTTGTTTCTCTTCTGATAGGTAGACAAAAGGAGCTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTGAACTTTCTGTGCTGTaGCCTGCTATCATTTTAGCG +
Preference number: 5 (lower is better)
Translates to: LSVLLPAIILAIFFRVIFELSVL*PAIILA
Trigger: CGCTAAAATGATAGCAGGCAACAGCACAGAAAGTTC...AAATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTTGGTCACTGGTGTTTTaGAACTTTCTGTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: TFCAVACYHFSDILSSNIWSLVF*NFLCCC
Trigger: GCAACAGCACAGAAAGTTCAAAAACACCAGTGACCA...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTAGTTCCCTCTCTTTaGCTCCTAGAAACACAGGTA +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLVPSL*LLETQV
Trigger: TACCTGTGTTTCTAGGAGCAAAAGAGAGGGAACTAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GGCAGTACTGAACCAATATTGAAACATAAGGTATTGGAATGGAAGGTATCATTGAGGGTCACTGACCCTTaGAATAGAATGATCATCCTT +
Preference number: 5 (lower is better)
Translates to: GSTEPILKHKVLEWKVSLRVTDP*NRMIIL
Trigger: AAGGATGATCATTCTATTCAAAGGGTCAGTGACCCT...CAATGATACCTTCCATTCCAATACCTTATGTTTCAATATTGGTTCAGTACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp AGGTATGGAAGTAGGAAATCTGTCCCTATACAGACCATGCTAAAATCTTCACTGTTCGTTATTTTCATTTaGAAGAAAGAACCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RYGSRKSVPIQTMLKSSLFVIFI*KKEPGP
Trigger: TGGGCCTGGTTCTTTCTTCAAAATGAAAATAACGAA...CAGTGAAGATTTTAGCATGGTCTGTATAGGGACAGATTTCCTACTTCCATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTATCACCAGGTGCCATTaGTTCCTTAAGTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: TFCAVACYHFSDILSSNIITRCH*FLKSDV
Trigger: AACATCAGACTTAAGGAACAAATGGCACCTGGTGAT...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCTTACAGCTTTTACAATaGTGGCCTGGAAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLLQLLQ*WPGKVQ
Trigger: CTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAA...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCATTACAGCTTTTACAATaGTGGCCTGGAAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSLQLLQ*WPGKVQ
Trigger: CTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAA...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CCA 90 bp TTTATTAGATTTTGGAACCTGAGCTTTCTCCTTGGTAATGTAAACTaGAATGCTACTGTTTTCCTTGGAGAATTTAGGGAGATAGATTCC +
Preference number: 5 (lower is better)
Translates to: FIRFWNLSFLLGNVN*NATVFLGEFREIDS
Trigger: GGAATCTATCTCCCTAAATTCTCCAAGGAAAACAGTAGCATTCCAGTTTACATTACCAAGGAGAAAGCTCAGGTTCCAAAATCTAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578145.1
CDS-3UTR CAA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTATCCACATGCTCCTATaGACAGGATATTTTTCATCG +
Preference number: 5 (lower is better)
Translates to: TFCAVACYHFSDILSSNIIHMLL*TGYFSS
Trigger: CGATGAAAAATATCCTGTCAATAGGAGCATGTGGAT...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAATTGGAAGAAATACTaGACTACAATTGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLNWKKY*TTIATS
Trigger: TGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp GTTATTAAAGAGTTACAAAGTATTCTAGGTCCCACTGGGTTGGTCTTTTTACTCAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: VIKELQSILGPTGLVFLLKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...GAGTAAAAAGACCAACCCAGTGGGACCTAGAATACTTTGTAACTCTTTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000674853.1
CDS-3UTR CAA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCACTCTCGACCTCAGAATaGGGCAATATAATATTCAAT +
Preference number: 5 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSLSTSE*GNIIFN
Trigger: ATTGAATATTATATTGCCCAATTCTGAGGTCGAGAG...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCAGATTCACTCCTACAATaGTGTGATGTTATTTGTCTC +
Preference number: 5 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSDSLLQ*CDVICL
Trigger: GAGACAAATAACATCACACAATTGTAGGAGTGAATC...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS-3UTR CAA 90 bp CCATCTGTTAAATTAGTGAGTAGAAAAGCTCTTACACACGTGTTTGTTAGCTCAATCTTAAGTTGTCTTTaGGGCCTATACATTGTAAGG +
Preference number: 5 (lower is better)
Translates to: PSVKLVSRKALTHVFVSSILSCL*GLYIVR
Trigger: CCTTACAATGTATAGGCCCAAAAGACAACTTAAGAT...TGAGCTAACAAACACGTGTGTAAGAGCTTTTCTACTCACTAATTTAACAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS TCA 90 bp TTAACTTTGTGTTACCAAAGAATGAAGTTGCATTCCTCATACACATaGATCTGTAGATGGACATTTTGTACCAGCTGCATATACCTAACA +
Preference number: 5 (lower is better)
Translates to: LTLCYQRMKLHSSYT*ICRWTFCTSCIYLT
Trigger: TGTTAGGTATATGCAGCTGGTACAAAATGTCCATCTACAGATTCATGTGTATGAGGAATGCAACTTCATTCTTTGGTAACACAAAGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579151.1
CDS-3UTR CAA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTAATTGGAAGAAATACTaGACTACAATTGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: TFCAVACYHFSDILSSNINWKKY*TTIATS
Trigger: TGAGGTGGCAATTGTAGTCAAGTATTTCTTCCAATT...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS-3UTR CAA 90 bp ACTTTCTGTGCTGTTGCCTGCTATCATTTTAGCGATATTCTTTCGAGTAATATTAAGAAAGCTTATCTGTaGCTATTTCCGATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: TFCAVACYHFSDILSSNIKKAYL*LFPILH
Trigger: GTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTT...AATATTACTCGAAAGAATATCGCTAAAATGATAGCAGGCAACAGCACAGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581680.1
ENST00000582913.5
CDS CCA 72 bp GCCCACCGGGCTCTGGGTAGCCCCTCACCAGGCTCTTaGCGGCCACCTAGCCCGGCGCCCGGCCCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: AHRALGSPSPGS*RPPSPAPGPLR
Trigger: CCGCAGGGGGCCGGGCGCCGGGCTAGGTGGCCGCCAAGAGCCTGGTGAGGGGCTACCCAGAGCCCGGTGGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 72 bp GCGCGCAGAACCATCCCCGCCACCACGGGGCTCGCCTaGTGGGTCCGGTGCGCGGGCGGCGCTGCGAGTCCC +
Preference number: 6 (lower is better)
Translates to: ARRTIPATTGLA*WVRCAGGAASP
Trigger: GGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCGGGGATGGTTCTGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 72 bp CGCAGAACCATCCCCGCCACCACGGGGCTCGCCTTGTaGGTCCGGTGCGCGGGCGGCGCTGCGAGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: RRTIPATTGLAL*VRCAGGAASPS
Trigger: GGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCGGGGATGGTTCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS GCA 72 bp GGGGCTCGCCTTGTGGGTCCGGTGCGCGGGCGGCGCTaGGAGTCCCTCCCTCACTCGAAGGAACGGCGCGAG +
Preference number: 6 (lower is better)
Translates to: GARLVGPVRGRR*ESLPHSKERRE
Trigger: CTCGCGCCGTTCCTTCGAGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS GCA 72 bp ATCCCCGCCACCACGGGGCTCGCCTTGTGGGTCCGGTaGGCGGGCGGCGCTGCGAGTCCCTCCCTCACTCGA +
Preference number: 6 (lower is better)
Translates to: IPATTGLALWVR*AGGAASPSLTR
Trigger: TCGAGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCGGGGAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 90 bp AGCTGCCAGGCGCGCAGAACCATCCCCGCCACCACGGGGCTCGCCTaGTGGGTCCGGTGCGCGGGCGGCGCTGCGAGTCCCTCCCTCACT +
Preference number: 6 (lower is better)
Translates to: SCQARRTIPATTGLA*WVRCAGGAASPSLT
Trigger: AGTGAGGGAGGGACTCGCAGCGCCGCCCGCGCACCGGACCCACAAGGCGAGCCCCGTGGTGGCGGGGATGGTTCTGCGCGCCTGGCAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS GCA 72 bp GAGGCGGCGCGGCGAGCAAAGGGGGCAAGAAGGGCGTaGTGTGCTCCCGCCTGGCTCCCGGGGCGTCGTTTG +
Preference number: 6 (lower is better)
Translates to: EAARRAKGARRA*CAPAWLPGRRL
Trigger: CAAACGACGCCCCGGGAGCCAGGCGGGAGCACAGCACGCCCTTCTTGCCCCCTTTGCTCGCCGCGCCGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 90 bp CCGGCAGCGGCGGCGGCTTCTTCAGGGGTAGCTGATGCCGGGGCCTaGGAGAGGGACGCTTTGGGAGGGTCCTGGGAGGCGGCGCGGCGA +
Preference number: 6 (lower is better)
Translates to: PAAAAASSGVADAGA*ERDALGGSWEAARR
Trigger: TCGCCGCGCCGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAGCTACCCCTGAAGAAGCCGCCGCCGCTGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 72 bp CCGGCGCCCGGCCCCCTGCGGCCGGCCCATTTAGTGTaGATCCTGGATCCGGCAGCGGCGGCGGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PAPGPLRPAHLV*ILDPAAAAASS
Trigger: TGAAGAAGCCGCCGCCGCTGCCGGATCCAGGATTCACACTAAATGGGCCGGCCGCAGGGGGCCGGGCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 72 bp CTAGGGGTGGTGGGACGCAAGGCCCATGCCCGTCTATaGCCTCTCGCCGCCGGCAGCTCGCAGCCACCCGAG +
Preference number: 6 (lower is better)
Translates to: LGVVGRKAHARL*PLAAGSSQPPE
Trigger: CTCGGGTGGCTGCGAGCTGCCGGCGGCGAGAGGCCATAGACGGGCATGGGCCTTGCGTCCCACCACCCCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS CCA 72 bp GCCGGGGCCTTGGAGAGGGACGCTTTGGGAGGGTCCTaGGAGGCGGCGCGGCGAGCAAAGGGGGCAAGAAGG +
Preference number: 6 (lower is better)
Translates to: AGALERDALGGS*EAARRAKGARR
Trigger: CCTTCTTGCCCCCTTTGCTCGCCGCGCCGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCAAGGCCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 72 bp GGGGTAGCTGATGCCGGGGCCTTGGAGAGGGACGCTTaGGGAGGGTCCTGGGAGGCGGCGCGGCGAGCAAAG +
Preference number: 6 (lower is better)
Translates to: GVADAGALERDA*GGSWEAARRAK
Trigger: CTTTGCTCGCCGCGCCGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAGCTACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 72 bp GCGGCGGCTTCTTCAGGGGTAGCTGATGCCGGGGCCTaGGAGAGGGACGCTTTGGGAGGGTCCTGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: AAASSGVADAGA*ERDALGGSWEA
Trigger: CGCCTCCCAGGACCCTCCCAAAGCGTCCCTCTCCAAGGCCCCGGCATCAGCTACCCCTGAAGAAGCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 72 bp CTACTTGGAAGCCCCTCTGAAGCCACCGCGTCTCCTTaGCCCGGCCTCGTCTCCGCTGCCCACGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: LLGSPSEATASP*PGLVSAAHAGC
Trigger: GCAGCCTGCGTGGGCAGCGGAGACGAGGCCGGGCAAAGGAGACGCGGTGGCTTCAGAGGGGCTTCCAAGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CAA 90 bp GGGAGTTTTCTACTTGGAAGCCCCTCTGAAGCCACCGCGTCTCCTTaGCCCGGCCTCGTCTCCGCTGCCCACGCAGGCTGCCGCGCTCTG +
Preference number: 6 (lower is better)
Translates to: GSFLLGSPSEATASP*PGLVSAAHAGCRAL
Trigger: CAGAGCGCGGCAGCCTGCGTGGGCAGCGGAGACGAGGCCGGGCAAAGGAGACGCGGTGGCTTCAGAGGGGCTTCCAAGTAGAAAACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS TCA 72 bp CCGGCTTCTCCAGGCTGGCAGTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTTCCGGGTGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: PASPGWQSDASW*GPGGFLPGGPV
Trigger: GACTGGCCCACCCGGAAGGAAGCCTCCCGGACCTCACCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000582913.5
ENST00000583325.1
CDS TCA 72 bp CAGCAGCAGCCTGAAGATGAGCCCGCACACCACTTCTaGGGCCATCGCGTCGGTCCGGCGAGTCGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: QQQPEDEPAHHF*GHRVGPASRSR
Trigger: TCTGCTCCGACTCGCCGGACCGACGCGATGGCCTCAGAAGTGGTGTGCGGGCTCATCTTCAGGCTGCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383408.6
ENST00000674853.1
CDS GCA 72 bp CCCACCGGTACTGAGGGGTGGAGTAGAGGTCGGCTTTaGCAGGGCCGTTCTCCATGGGCAGGCTTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: PTGTEGWSRGRL*QGRSPWAGLGG
Trigger: TCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS TCA 72 bp CCGGCTTCTCCAGGCTGGCAGTCAGATGCATCATGGTaGGGTCCGGGAGGCTTCCTTCCGGGTGGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: PASPGWQSDASW*GPGGFLPGGPV
Trigger: AACTGGCCCACCCGGAAGGAAGCCTCCCGGACCTCACCATGATGCATCTGACTGCCAGCCTGGAGAAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580640.5
ENST00000674853.1
CDS CAA 72 bp GGTCGGCTTTGCCAGGGCCGTTCTCCATGGGCAGGCTaGGGTGGATGGTGTGGTAATCCACGGGGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: GRLCQGRSPWAG*GGWCGNPRGCR
Trigger: ACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS TCA 72 bp CTCCACCTCCTCGATGGTCTCAGTGGTCCCCTGGCGTaGGTACAGCATGGTACACTGCGTGGGCTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: LHLLDGLSGPLA*VQHGTLRGLAG
Trigger: TCCAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCGAGGAGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
CDS TCA 72 bp GCGTGGGGAGAAATGGAGACCAGAGCGCATATCGGGTaGGTGGGTCTCCCACTCCCTCCTCCACCGCCTCAA +
Preference number: 6 (lower is better)
Translates to: AWGEMETRAHIG*VGLPLPPPPPQ
Trigger: TTGAGGCGGTGGAGGAGGGAGTGGGAGACCCACTCACCCGATATGCGCTCTGGTCTCCATTTCTCCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 72 bp GTCGGCTTTGCCAGGGCCGTTCTCCATGGGCAGGCTTaGGTGGATGGTGTGGTAATCCACGGGGTTGCCGTT +
Preference number: 6 (lower is better)
Translates to: VGFARAVLHGQA*VDGVVIHGVAV
Trigger: AACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp CCTCACTCGAAGGAACGGCGCGAGCGTGGGGAGAAATaGAGACCAGAGCGCATATCGGGTGAGTGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PHSKERRERGEK*RPERISGEWVS
Trigger: GGAGACCCACTCACCCGATATGCGCTCTGGTCTCCATTTCTCCCCACGCTCGCGCCGTTCCTTCGAGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674853.1
CDS CCA 72 bp TGCCAGGGCCGTTCTCCATGGGCAGGCTTGGGTGGATaGTGTGGTAATCCACGGGGTTGCCGTTCACAGTCA +
Preference number: 6 (lower is better)
Translates to: CQGRSPWAGLGG*CGNPRGCRSQS
Trigger: TGACTGTGAACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp TGGAGTAGAGGTCGGCTTTGCCAGGGCCGTTCTCCATaGGCAGGCTTGGGTGGATGGTGTGGTAATCCACGG +
Preference number: 6 (lower is better)
Translates to: WSRGRLCQGRSP*AGLGGWCGNPR
Trigger: CCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp AGGATTCATCAGAGGGCTCCCACCGGTACTGAGGGGTaGAGTAGAGGTCGGCTTTGCCAGGGCCGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: RIHQRAPTGTEG*SRGRLCQGRSP
Trigger: TGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCACCCCTCAGTACCGGTGGGAGCCCTCTGATGAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 90 bp TGGAGTAGAGGTCGGCTTTGCCAGGGCCGTTCTCCATGGGCAGGCTaGGGTGGATGGTGTGGTAATCCACGGGGTTGCCGTTCACAGTCA +
Preference number: 6 (lower is better)
Translates to: WSRGRLCQGRSPWAG*GGWCGNPRGCRSQS
Trigger: TGACTGTGAACGGCAACCCCGTGGATTACCACACCATCCACCCAAGCCTGCCCATGGAGAACGGCCCTGGCAAAGCCGACCTCTACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp GCGTACCACAGGCTCCGCCTCCTCCCCGCTGTTATTTaGATGGGGCTACAAGCCAGGGCTTTGTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: AYHRLRLLPAVI*MGLQARALSSS
Trigger: AGAAGAGGACAAAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGGAGGCGGAGCCTGTGGTACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 90 bp GTAATGGGTTGCGTACCACAGGCTCCGCCTCCTCCCCGCTGTTATTaGGATGGGGCTACAAGCCAGGGCTTTGTCCTCTTCTTTGGTCCC +
Preference number: 6 (lower is better)
Translates to: VMGCVPQAPPPPRCY*DGATSQGFVLFFGP
Trigger: GGGACCAAAGAAGAGGACAAAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGGAGGCGGAGCCTGTGGTACGCAACCCATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp ACCACAGGCTCCGCCTCCTCCCCGCTGTTATTTGGATaGGGCTACAAGCCAGGGCTTTGTCCTCTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: TTGSASSPLLFG*GYKPGLCPLLW
Trigger: CCAAAGAAGAGGACAAAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGGGGAGGAGGCGGAGCCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp CGATGGTCTCAGTGGTCCCCTGGCGTGAGTACAGCATaGTACACTGCGTGGGCTCGCTGGAGATACTGTCAT +
Preference number: 6 (lower is better)
Translates to: RWSQWSPGVSTA*YTAWARWRYCH
Trigger: ATGACAGTATCTCCAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGAGACCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
CDS TCA 72 bp CTCCTCGGATTCCTCCTCTTCCTCTCCGTCCTCCTCTaGCTCCTCGCTGTCTTTCCCAAGATCACCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LLGFLLFLSVLL*LLAVFPKITLL
Trigger: CAGAAGGGTGATCTTGGGAAAGACAGCGAGGAGTCAGAGGAGGACGGAGAGGAAGAGGAGGAATCCGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000578145.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS TCA 72 bp ACATCCTGGGACGGAAGGTCTGATGGAGACTGCCAGTaGACAACAAGGCCTCTGCCATGCTGTGGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: TSWDGRSDGDCQ*TTRPLPCCGSG
Trigger: TCCAGACCCACAGCATGGCAGAGGCCTTGTTGTTCACTGGCAGTCTCCATCAGACCTTCCGTCCCAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS CCA 72 bp AATAGCCAGCAGAACACAGAGACAGCTGAACAGCAATaGGTCGAACGTCCGGCACCAGGACCACCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: NSQQNTETAEQQ*VERPAPGPPGA
Trigger: TGCACCTGGTGGTCCTGGTGCCGGACGTTCGACCCATTGCTGTTCAGCTGTCTCTGTGTTCTGCTGGCTATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp TCAGTGGTCCCCTGGCGTGAGTACAGCATGGTACACTaGGTGGGCTCGCTGGAGATACTGTCATGTGAATCT +
Preference number: 6 (lower is better)
Translates to: SVVPWREYSMVH*VGSLEILSCES
Trigger: AGATTCACATGACAGTATCTCCAGCGAGCCCACGCAGTGTACCATGCTGTACTCACGCCAGGGGACCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
CDS CAA 72 bp CCCGCTGTTATTTGGATGGGGCTACAAGCCAGGGCTTaGTCCTCTTCTTTGGTCCCCTCATCCTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: PAVIWMGLQARA*SSSLVPSSCTR
Trigger: CCTTGTGCAGGATGAGGGGACCAAAGAAGAGGACAAAGCCCTGGCTTGTAGCCCCATCCAAATAACAGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS TCA 72 bp ATGCGATCAGCCAGTCCCAGTAGCGCAGGATGCTCTTaGTGGGTTTCAACAGCAAATCGCCCCCAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: MRSASPSSAGCS*WVSTANRPQRA
Trigger: TGCTCTTTGGGGGCGATTTGCTGTTGAAACCCATCAAGAGCATCCTGCGCTACTGGGACTGGCTGATCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS TCA 72 bp GAAGATCCTCCAAAGAACATCCTGGGACGGAAGGTCTaGTGGAGACTGCCAGTGAACAACAAGGCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: EDPPKNILGRKV*WRLPVNNKASA
Trigger: GGCAGAGGCCTTGTTGTTCACTGGCAGTCTCCATCAGACCTTCCGTCCCAGGATGTTCTTTGGAGGATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS GCA 72 bp GGTCTGATGGAGACTGCCAGTGAACAACAAGGCCTCTaGCATGCTGTGGGTCTGGATGAACATCTGGACATG +
Preference number: 6 (lower is better)
Translates to: GLMETASEQQGL*HAVGLDEHLDM
Trigger: CATGTCCAGATGTTCATCCAGACCCACAGCATGGCAGAGGCCTTGTTGTTCACTGGCAGTCTCCATCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS CCA 72 bp CCAGTGAACAACAAGGCCTCTGCCATGCTGTGGGTCTaGATGAACATCTGGACATGGTCTCACATGCAGCCT +
Preference number: 6 (lower is better)
Translates to: PVNNKASAMLWV*MNIWTWSHMQP
Trigger: AGGCTGCATGTGAGACCATGTCCAGATGTTCATCCAGACCCACAGCATGGCAGAGGCCTTGTTGTTCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS CAA 72 bp TTCCCAGCAGTGGTGATCATGTTGCCAATGAACTCCTaGAGCTTAGAGGCCACAGAGGCAAGCCTGCGGAAC +
Preference number: 6 (lower is better)
Translates to: FPAVVIMLPMNS*SLEATEASLRN
Trigger: GTTCCGCAGGCTTGCCTCTGTGGCCTCTAAGCTCAAGGAGTTCATTGGCAACATGATCACCACTGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp AGTACTTGGGCCAGATCTCTGCGATGGCTTTCCTTCTaGGTCTATATAAGACAGCGATCAGCCAGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: STWARSLRWLSF*VYIRQRSASRR
Trigger: ACGCCTGCTGGCTGATCGCTGTCTTATATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGCCCAAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp TCCCTTTTCCGAGGATGCTCCCATGTTTGTGTTGGGTaGCAGAAGCACCACGCAAGTCCTGAGGAAGATGAA +
Preference number: 6 (lower is better)
Translates to: SLFRGCSHVCVG*QKHHASPEEDE
Trigger: TTCATCTTCCTCAGGACTTGCGTGGTGCTTCTGGCACCCAACACAAACATGGGAGCATCCTCGGAAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583325.1
CDS CCA 72 bp AGACTGTGCAGACACTTGAAGCCAGACGGCGCAGCTTaGCGTACGGCAGAGCAAAAGCCCAAGAAATCAAAA +
Preference number: 6 (lower is better)
Translates to: RLCRHLKPDGAA*RTAEQKPKKSK
Trigger: TTTTGATTTCTTGGGCTTTTGCTCTGCCGTACGCCAAGCTGCGCCGTCTGGCTTCAAGTGTCTGCACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp CGACCCCCTATCAAGTCACAAGGATCAAACCATGCATaGAACACATGGGTCACGGGAACGCCTGAATTCTGG +
Preference number: 6 (lower is better)
Translates to: RPPIKSQGSNHA*NTWVTGTPEFW
Trigger: CCAGAATTCAGGCGTTCCCGTGACCCATGTGTTCCATGCATGGTTTGATCCTTGTGACTTGATAGGGGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CAA 72 bp AAGGAGGCCGCATCAAGGTTCATGCAGATCTCGACATaGTCACCTGCCATGATTCGCACTGCAGCCTTGTTC +
Preference number: 6 (lower is better)
Translates to: KEAASRFMQIST*SPAMIRTAALF
Trigger: GAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGCATGAACCTTGATGCGGCCTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 72 bp TGCAAACACGGAGAAGCAGCCACAGGAAGGTTGCCTTaGAAGATCCTCCAAAGAACATCCTGGGACGGAAGG +
Preference number: 6 (lower is better)
Translates to: CKHGEAATGRLP*KILQRTSWDGR
Trigger: CCTTCCGTCCCAGGATGTTCTTTGGAGGATCTTCAAAGGCAACCTTCCTGTGGCTGCTTCTCCGTGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS CAA 90 bp TGTTGGCTGAAGGAGGCCGCATCAAGGTTCATGCAGATCTCGACATaGTCACCTGCCATGATTCGCACTGCAGCCTTGTTCTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: CWLKEAASRFMQIST*SPAMIRTAALFSSS
Trigger: TGAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGCATGAACCTTGATGCGGCCTCCTTCAGCCAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 90 bp CTAGCAATGAACATCCCGATGTCAGGTACAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTTAAGAGTTCAGCATGGCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LAMNIPMSGTNTLIP*PASAPFKSSAWLGR
Trigger: CCTCCCCAGCCATGCTGAACTCTTAAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTGACATCGGGATGTTCATTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579899.1
CDS CAA 90 bp TCACTGCTTTTAAGTCCCTTTTCCGAGGATGCTCCCATGTTTGTGTaGGGTGCCAGAAGCACCACGCAAGTCCTGAGGAAGATGAACCCA +
Preference number: 6 (lower is better)
Translates to: SLLLSPFSEDAPMFV*GARSTTQVLRKMNP
Trigger: TGGGTTCATCTTCCTCAGGACTTGCGTGGTGCTTCTGGCACCCAACACAAACATGGGAGCATCCTCGGAAAAGGGACTTAAAAGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583325.1
CDS GCA 72 bp GCCAATGCAGATGAAATACTGGAAGGTGATGATGCATaGCAGGAAGCAGCAGTACTTGGGCCAGATCTCTGC +
Preference number: 6 (lower is better)
Translates to: ANADEILEGDDA*QEAAVLGPDLC
Trigger: GCAGAGATCTGGCCCAAGTACTGCTGCTTCCTGGCATGCATCATCACCTTCCAGTATTTCATCTGCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp CGCATCAAGGTTCATGCAGATCTCGACATTGTCACCTaGCATGATTCGCACTGCAGCCTTGTTCTCATCCTC +
Preference number: 6 (lower is better)
Translates to: RIKVHADLDIVT*HDSHCSLVLIL
Trigger: GAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGCATGAACCTTGATGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp ATGGCAGAAGAAGAAGCAAACACATCCTTCTTCACATaGAGGCAGCAAGAGACGTGCAGTGTGAAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: MAEEEANTSFFT*RQQETCSVKWG
Trigger: CCCCCACTTCACACTGCACGTCTCTTGCTGCCTCCATGTGAAGAAGGATGTGTTTGCTTCTTCTTCTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579899.1
CDS CAA 90 bp CTAGCAATGAACATCCCGATGTCAGGTACAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTTAAGCTTTCAAAGCCGATCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LAMNIPMSGTNTLIP*PASAPFKLSKPICR
Trigger: CCGGCAGATCGGCTTTGAAAGCTTAAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTGACATCGGGATGTTCATTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp GCAGATCTCGACATTGTCACCTGCCATGATTCGCACTaGAGCCTTGTTCTCATCCTCAAAAATCTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: ADLDIVTCHDSH*SLVLILKNLPL
Trigger: CAACGGCAGATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp CTGAGATTCACTGCTTTTAAGTCCCTTTTCCGAGGATaGTCCCATGTTTGTGTTGGGTGCCAGAAGCACCAC +
Preference number: 6 (lower is better)
Translates to: LRFTAFKSLFRG*SHVCVGCQKHH
Trigger: GTGGTGCTTCTGGCACCCAACACAAACATGGGAGCATCCTCGGAAAAGGGACTTAAAAGCAGTGAATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583325.1
CDS CCA 72 bp TGCCAGCATCAGCTCCCTTTAAGAGTTCAGCATGGCTaGGGAGGCCTCAGGAAACTTAAAATCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: CQHQLPLRVQHG*GGLRKLKIMAE
Trigger: TTCTGCCATGATTTTAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTCTTAAAGGGAGCTGATGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579899.1
CDS CAA 90 bp ATGCAGATCTCGACATTGTCACCTGCCATGATTCGCACTGCAGCCTaGTTCTCATCCTCAAAAATCTGCCGTTGTAAGGAGGCACACAGA +
Preference number: 6 (lower is better)
Translates to: MQISTLSPAMIRTAA*FSSSKICRCKEAHR
Trigger: TCTGTGTGCCTCCTTACAACGGCAGATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGAGATCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 90 bp AGTCCATTTTCAAACTGCAAACACGGAGAAGCAGCCACAGGAAGGTaGCCTTTGAAGATCCTCCAAAGAACATCCTGGGACGGAAGGTCT +
Preference number: 6 (lower is better)
Translates to: SPFSNCKHGEAATGR*PLKILQRTSWDGRS
Trigger: AGACCTTCCGTCCCAGGATGTTCTTTGGAGGATCTTCAAAGGCAACCTTCCTGTGGCTGCTTCTCCGTGTTTGCAGTTTGAAAATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582937.1
CDS TCA 72 bp TGGCGTGGTGGTACCACGACAGGTCCGGGTTCACTATaGTCTTCCAAGTACTTGAACAGTCCGTTTGAATTA +
Preference number: 6 (lower is better)
Translates to: WRGGTTTGPGSL*SSKYLNSPFEL
Trigger: TAATTCAAACGGACTGTTCAAGTACTTGGAAGATCATAGTGAACCCGGACCTGTCGTGGTACCACCACGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579112.1
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS GCA 72 bp ATTCGCACTGCAGCCTTGTTCTCATCCTCAAAAATCTaGCGTTGTAAGGAGGCACACAGAAGCAGCATGAAG +
Preference number: 6 (lower is better)
Translates to: IRTAALFSSSKI*RCKEAHRSSMK
Trigger: CTTCATGCTGCTTCTGTGTGCCTCCTTACAACGGCAGATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 72 bp AACATCCCGATGTCAGGTACAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTTAAGCTTTCAAAGCCG +
Preference number: 6 (lower is better)
Translates to: NIPMSGTNTLIP*PASAPFKLSKP
Trigger: CGGCTTTGAAAGCTTAAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTGACATCGGGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 72 bp TCGACATTGTCACCTGCCATGATTCGCACTGCAGCCTaGTTCTCATCCTCAAAAATCTGCCGTTGTAAGGAG +
Preference number: 6 (lower is better)
Translates to: STLSPAMIRTAA*FSSSKICRCKE
Trigger: CTCCTTACAACGGCAGATTTTTGAGGATGAGAACAAGGCTGCAGTGCGAATCATGGCAGGTGACAATGTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 72 bp AACATCCCGATGTCAGGTACAAACACTCTGATCCCATaGCCAGCATCAGCTCCCTTTAAGAGTTCAGCATGG +
Preference number: 6 (lower is better)
Translates to: NIPMSGTNTLIP*PASAPFKSSAW
Trigger: CCATGCTGAACTCTTAAAGGGAGCTGATGCTGGCAATGGGATCAGAGTGTTTGTACCTGACATCGGGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579899.1
CDS CAA 90 bp ATGAAATACTGGAAGGTGATGATGCATGCCAGGAAGCAGCAGTACTaGGGCCAGATCTCTGCGATGGCTTTCCTTCTGCGTCTATATAAG +
Preference number: 6 (lower is better)
Translates to: MKYWKVMMHARKQQY*GQISAMAFLLRLYK
Trigger: CTTATATAGACGCAGAAGGAAAGCCATCGCAGAGATCTGGCCCAAGTACTGCTGCTTCCTGGCATGCATCATCACCTTCCAGTATTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 90 bp TTGACTGTGCAGGCCAGGCTGAAAGCCTGGATCAACCAACAACTATaGTGCACCAATGTTCCAATGTATCCACATGCTCCTATTGACAGG +
Preference number: 6 (lower is better)
Translates to: LTVQARLKAWINQQL*CTNVPMYPHAPIDR
Trigger: CCTGTCAATAGGAGCATGTGGATACATTGGAACATTGGTGCACAATAGTTGTTGGTTGATCCAGGCTTTCAGCCTGGCCTGCACAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 90 bp CAGGACTTTCATGATGTCCTGCTCATCTTCTTCTTCAGCTTCCTCTaGCTCTACCTTCTTTCTCTCTTGCTTCTCTTCCTTCGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: QDFHDVLLIFFFSFL*LYLLSLLLLFLRFL
Trigger: GAGGAAGCGAAGGAAGAGAAGCAAGAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAAGAAGATGAGCAGGACATCATGAAAGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS TCA 72 bp AAACCATGCATGGAACACATGGGTCACGGGAACGCCTaGATTCTGGTCAAGGATATAAGGGTTAGAGTCGAT +
Preference number: 6 (lower is better)
Translates to: KPCMEHMGHGNA*ILVKDIRVRVD
Trigger: ATCGACTCTAACCCTTATATCCTTGACCAGAATTCAGGCGTTCCCGTGACCCATGTGTTCCATGCATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CCA 72 bp GCTTCTCTTCCTTCGCTTCCTCTTCTTCCTCCTCTTTaGGCTCTCCTTCCACTTGTATATCTTGAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: ASLPSLPLLPPL*ALLPLVYLEVP
Trigger: AGGAACTTCAAGATATACAAGTGGAAGGAGAGCCCAAAGAGGAGGAAGAAGAGGAAGCGAAGGAAGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS CCA 72 bp AAGCTCTGCTGGTCCATAACTTTCAACTGGCTTTGTTaGGCACTCATTGTGAAAATAGGCTTCTCCGACTCC +
Preference number: 6 (lower is better)
Translates to: KLCWSITFNWLC*ALIVKIGFSDS
Trigger: GGAGTCGGAGAAGCCTATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGACCAGCAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302079.10
CDS CCA 72 bp ATCAAGTCACAAGGATCAAACCATGCATGGAACACATaGGTCACGGGAACGCCTGAATTCTGGTCAAGGATA +
Preference number: 6 (lower is better)
Translates to: IKSQGSNHAWNT*VTGTPEFWSRI
Trigger: TATCCTTGACCAGAATTCAGGCGTTCCCGTGACCCATGTGTTCCATGCATGGTTTGATCCTTGTGACTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CAA 72 bp AGATCTGCAGTGAATAAAATCTGGCACAGGGTTATGTaGGCTGAAGGAGGCCGCATCAAGGTTCATGCAGAT +
Preference number: 6 (lower is better)
Translates to: RSAVNKIWHRVM*AEGGRIKVHAD
Trigger: ATCTGCATGAACCTTGATGCGGCCTCCTTCAGCCAACATAACCCTGTGCCAGATTTTATTCACTGCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 72 bp AATGTCAGAACGTCTGTGCTGATGTCTCTGGAAGAATaGGACCCCGGGCTCAAAGACCCACTGACATTAAAA +
Preference number: 6 (lower is better)
Translates to: NVRTSVLMSLEE*DPGLKDPLTLK
Trigger: TTTTAATGTCAGTGGGTCTTTGAGCCCGGGGTCCAATTCTTCCAGAGACATCAGCACAGACGTTCTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579949.2
CDS CAA 72 bp ATGAAGGGAGAGCTGATCATGGCATATTTTCTTCTGTaGCGAATCATCCAAAGAGTGCACGACCAGATCAGC +
Preference number: 6 (lower is better)
Translates to: MKGELIMAYFLL*RIIQRVHDQIS
Trigger: GCTGATCTGGTCGTGCACTCTTTGGATGATTCGCAACAGAAGAAAATATGCCATGATCAGCTCTCCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CAA 72 bp AAAGCTCTGCTGGTCCATAACTTTCAACTGGCTTTGTaGGGCACTCATTGTGAAAATAGGCTTCTCCGACTC +
Preference number: 6 (lower is better)
Translates to: KALLVHNFQLAL*GTHCENRLLRL
Trigger: GAGTCGGAGAAGCCTATTTTCACAATGAGTGCCCAACAAAGCCAGTTGAAAGTTATGGACCAGCAGAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302079.10
CDS GCA 72 bp ATGATGTCCTGCTCATCTTCTTCTTCAGCTTCCTCTTaGTCTACCTTCTTTCTCTCTTGCTTCTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: MMSCSSSSSASS*STFFLSCFSSF
Trigger: GAAGGAAGAGAAGCAAGAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAAGAAGATGAGCAGGACATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS GCA 72 bp CAGGATATTTTTCATCGTAATCACAAAAACGTTGTATaGGATCAGCCAGTCCCAGTAGCGCAGGATGCTCTT +
Preference number: 6 (lower is better)
Translates to: QDIFHRNHKNVV*DQPVPVAQDAL
Trigger: AAGAGCATCCTGCGCTACTGGGACTGGCTGATCGCATACAACGTTTTTGTGATTACGATGAAAAATATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS CCA 72 bp TCAATTCTTGCCTTTACAGCTTTTACAATTGTGGCCTaGAAAAGTTCAGCCACCTTGATGCCAGAATCTGGG +
Preference number: 6 (lower is better)
Translates to: SILAFTAFTIVA*KSSATLMPESG
Trigger: CCCAGATTCTGGCATCAAGGTGGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAAAGGCAAGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582913.5
CDS CAA 72 bp CATGATGTCCTGCTCATCTTCTTCTTCAGCTTCCTCTaGCTCTACCTTCTTTCTCTCTTGCTTCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: HDVLLIFFFSFL*LYLLSLLLLFL
Trigger: AAGGAAGAGAAGCAAGAGAGAAAGAAGGTAGAGCAAGAGGAAGCTGAAGAAGAAGATGAGCAGGACATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000583325.1
ENST00000674853.1
CDS CCA 72 bp GCCTGGAAAAGTTCAGCTCCTCTTGATGCCAGAATCTaGGAAGCTTTTATATCAGCCACAACATGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: AWKSSAPLDARI*EAFISATTCRK
Trigger: TTTTCTACATGTTGTGGCTGATATAAAAGCTTCCCAGATTCTGGCATCAAGAGGAGCTGAACTTTTCCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000674853.1
CDS CCA 72 bp CTTCCTCAATTCTTGCCTTTACAGCTTTTACAATTGTaGCCTGGAAAAGTTCAGCTCCTCTTGATGCCAGAA +
Preference number: 6 (lower is better)
Translates to: LPQFLPLQLLQL*PGKVQLLLMPE
Trigger: TTCTGGCATCAAGAGGAGCTGAACTTTTCCAGGCCACAATTGTAAAAGCTGTAAAGGCAAGAATTGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000579949.2
ENST00000580640.5
ENST00000674853.1
CDS CAA 72 bp GAGGAAAAGAAAGCTTATCTGTTGCTATTTCCGATTTaGCACCCAGACTTAAGTTTTGGGTGGGCTGATGGT +
Preference number: 6 (lower is better)
Translates to: EEKKAYLLLFPI*HPDLSFGWADG
Trigger: ACCATCAGCCCACCCAAAACTTAAGTCTGGGTGCAAAATCGGAAATAGCAACAGATAAGCTTTCTTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581680.1
CDS TCA 72 bp TTAAGTTTTGGGTGGGCTGATGGTCCACAAAGAATTTaGGTTTCCTTCCAGTTCTGCTACTGTTATGTCTTC +
Preference number: 6 (lower is better)
Translates to: LSFGWADGPQRI*VSFQFCYCYVF
Trigger: GAAGACATAACAGTAGCAGAACTGGAAGGAAACTCAAATTCTTTGTGGACCATCAGCCCACCCAAAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581680.1
CDS TCA 72 bp ATAAGTCCATCATCTAGATGTAGTCTTGTAATGTCATaGAAGATAGTTCTAGACACAGGGGCCGTCAGGTTA +
Preference number: 6 (lower is better)
Translates to: ISPSSRCSLVMS*KIVLDTGAVRL
Trigger: TAACCTGACGGCCCCTGTGTCTAGAACTATCTTTCATGACATTACAAGACTACATCTAGATGATGGACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302079.10
ENST00000383408.6
ENST00000503781.7
ENST00000580640.5
ENST00000582913.5
ENST00000674853.1
CDS TCA 72 bp TGTTACCAAAGAATGAAGTTGCATTCCTCATACACATaGATCTGTAGATGGACATTTTGTACCAGCTGCATA +
Preference number: 6 (lower is better)
Translates to: CYQRMKLHSSYT*ICRWTFCTSCI
Trigger: TATGCAGCTGGTACAAAATGTCCATCTACAGATTCATGTGTATGAGGAATGCAACTTCATTCTTTGGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579151.1