RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PICK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100151

Ensembl transcript IDs: ENST00000356976.8, ENST00000404072.7, ENST00000424694.5, ENST00000426258.5, ENST00000432756.6, ENST00000435166.1, ENST00000437453.5, ENST00000445628.5, ENST00000466374.1, ENST00000468288.5, ENST00000469819.5, ENST00000472724.5, ENST00000476157.5, ENST00000484021.5, ENST00000494434.1

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTaGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACT +
Preference number: 1 (lower is better)
Translates to: DTGPEPSPPSEKWPS*GNRINKGRRGVMGT
Trigger: AGTCCCCATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGCTGGACGGGCCGGTCTaGGGCGAGGCAAGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGLDGPV*GEARVP
Trigger: GGGCACCCTTGCCTCGCCCCAGACCGGCCCGTCCAG...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACCTGGACGGGCCGGTCTaGGGCGAGGCAAGGGTGCCC +
Preference number: 2 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNLDGPV*GEARVP
Trigger: GGGCACCCTTGCCTCGCCCCAGACCGGCCCGTCCAG...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACCAAGCTCTCCCTCTaGCCGGGGAGCCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGTKLSL*PGSREG
Trigger: CCCCTCCCGGCTCCCCGGCCAGAGGGAGAGCTTGGT...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR GCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAGCCAGCAGGCCTTTATaGGTCGCCCCCTTGCGCGGC +
Preference number: 2 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGASRPL*VAPLRG
Trigger: GCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGC...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACTCAGCTGTCCACGGCTaGCCCCACTCCCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNSAVHG*PHSQQA
Trigger: AGCCTGCTGGGAGTGGGGCCAGCCGTGGACAGCTGA...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACGTGCCCAGGAGGCATTaGCCCCAACCTCAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNVPRRH*PQPQLS
Trigger: GGACAGCTGAGGTTGGGGTCAATGCCTCCTGGGCAC...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTTCCTCCCACGCACCCTaGCCCCGGCACCACAGCCGC +
Preference number: 2 (lower is better)
Translates to: TRSRARTPATSKSFLFLPSSHAP*PRHHSR
Trigger: GCGGCTGTGGTGCCGGGGGCAGGGTGCGTGGGAGGA...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR GCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACAGCCCAGGTTCGCTGTaGGAGGACAGAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNSPGSL*EDRGAG
Trigger: CCCTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCT...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGCCAGGTCCCAGGCCATaGCCCTGGTGCCTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMPGPRP*PWCLSW
Trigger: CCAGGACAGGCACCAGGGTCATGGCCTGGGACCTGG...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGAGCATCTGCGGTCCCTaGACTCATGTTCTCCACCAG +
Preference number: 2 (lower is better)
Translates to: RLRPRASAVPELMFSTSRSICGP*THVLHQ
Trigger: CTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCT...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
3UTR-3UTR GCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGTCCTCCCACGCACCCTaGCCCCGGCACCACAGCCGC +
Preference number: 2 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWSSHAP*PRHHSR
Trigger: GCGGCTGTGGTGCCGGGGGCAGGGTGCGTGGGAGGA...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR GCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGGGGGCGAGGCAAGGGTaGCCAGGAGGCATTGACCCC +
Preference number: 2 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMGARQG*PGGIDP
Trigger: GGGGTCAATGCCTCCTGGGCACCCTTGCCTCGCCCC...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCAGGTGTGATGGGGACTaGACGGGCCGGTCTGGGGCG +
Preference number: 2 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSRCDGD*TGRSGA
Trigger: CGCCCCAGACCGGCCCGTCCAGTCCCCATCACACCT...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGGCTCCGGGGGCAGTGTaGGCGCCCACAAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWAPGAV*APTRSR
Trigger: CCTGCTCCTTGTGGGCGCTCACACTGCCCCCGGAGC...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGACCAAGCTCTCCCTCTaGCCGGGGAGCCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWTKLSL*PGSREG
Trigger: CCCCTCCCGGCTCCCCGGCCAGAGGGAGAGCTTGGT...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGGTGCCCAGGAGGCATTaGCCCCAACCTCAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMVPRRH*PQPQLS
Trigger: GGACAGCTGAGGTTGGGGTCAATGCCTCCTGGGCAC...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR GCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGGGGGCGAGGCAAGGGTaGCCAGGAGGCATTGACCCC +
Preference number: 2 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWGARQG*PGGIDP
Trigger: GGGGTCAATGCCTCCTGGGCACCCTTGCCTCGCCCC...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAACCAGGTCCCAGGCCATaGCCCTGGTGCCTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SRFVFIRYRPRTQPSFREPGPRP*PWCLSW
Trigger: CCAGGACAGGCACCAGGGTCATGGCCTGGGACCTGG...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR TCA 90 bp TCAGCGGTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGGCTCCTCTAGCCTCTTaGCAAGCCCATCATTGCACA +
Preference number: 2 (lower is better)
Translates to: SAVRSSSSSLLTSPSLHRAPLAS*QAHHCT
Trigger: TGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGC...CCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGACCGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
3UTR-3UTR GCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGAGCCCAGGTTCGCTGTaGGAGGACAGAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWSPGSL*EDRGAG
Trigger: CCCTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCT...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR TCA 72 bp GATGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTaGACTCATGTTCTCCACCAGCCGGTGCTTGACTTT +
Preference number: 3 (lower is better)
Translates to: DGPAQAQSICGP*THVLHQPVLDF
Trigger: AAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
3UTR-3UTR CAA 90 bp CGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCCGGAGCTCCTCTAGCCTCTaGACAAGCCCATCATTGCAC +
Preference number: 3 (lower is better)
Translates to: RSSSSSLLTSPSLHRMARSSSSL*TSPSLH
Trigger: GTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCT...CCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
3UTR CCA 72 bp CCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTaGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTG +
Preference number: 3 (lower is better)
Translates to: PEPSPPSEKWPS*GNRINKGRRGV
Trigger: CACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
3UTR-3UTR CAA 90 bp TCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCCGGCTCAGGCCCAGATCCACCAGCCGGTGCTaGACTTTCTTCAACACTTCA +
Preference number: 3 (lower is better)
Translates to: SSLLTSPSLHRMARLRPRSTSRC*TFFNTS
Trigger: TGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGA...TCTGGGCCTGAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR CCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCAGCCTCGCTCGCAGCTaGCTGGGGCTCCCGCACCCC +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAASLARS*LGLPHP
Trigger: GGGGTGCGGGAGCCCCAGCCAGCTGCGAGCGAGGCT...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCGCTCCGGGGGCAGTGTaGGCGCCCACAAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPAPGAV*APTRSR
Trigger: CCTGCTCCTTGTGGGCGCTCACACTGCCCCCGGAGC...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCGCCAGCAGGCCTTTATaGGTCGCCCCCTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAASRPL*VAPLRG
Trigger: GCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGC...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCCCCCTCGTGTATCCCTaGACGGCTCCCCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPPLVYP*TAPQLP
Trigger: CGGCAGCTGGGGAGCCGTCCAGGGATACACGAGGGG...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
73% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCGGCCAGGCTGGTACCTaGACCCACCTGCCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPGQAGT*THLPFH
Trigger: GTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCC...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCCAATGTCCAGGGACATaGCCTGCTTGGGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPQCPGT*PAWGPP
Trigger: AGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTG...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCTGCCGAACTTCTCGATaGTGCGGTGGGCATCGGCGA +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAACRTSR*CGGHRR
Trigger: TCGCCGATGCCCACCGCAGCATCGAGAAGTTCGGCA...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCGTGGACACGAGGCGCTaGAGCTGGAACACGATGTCC +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPVDTRR*SWNTMS
Trigger: GGACATCGTGTTCCAGCTGCAGCGCCTCGTGTCCAC...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGAGCCTCGCTCGCAGCTaGCTGGGGCTCCCGCACCCC +
Preference number: 4 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQSLARS*LGLPHP
Trigger: GGGGTGCGGGAGCCCCAGCCAGCTGCGAGCGAGGCT...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCCCCCTCCTCCAATGCTaGTCCCGATCAGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPPLLQC*SRSGSE
Trigger: CTCAGAACCTGATCGGGATCAGCATTGGAGGAGGGG...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
69% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCACGATGTCCTGGACGTaGTTCTGGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAATMSWT*FWSSSS
Trigger: GGAGCTGCTGGACCAGAAGCACGTCCAGGACATCGT...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCATCCCGATCAGGTTCTaGGCATCCTTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPIPIRF*ASFCRV
Trigger: GACCCTGCAGAAGGATGCTCAGAACCTGATCGGGAT...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCAGCATCTGCGGTCCCTaGACTCATGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPSICGP*THVLHQ
Trigger: CTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCT...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCACTCATAGTTGCCGGTaGTCACCCGGTAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPTHSCR*SPGKGA
Trigger: AGCCCCTTTACCGGGTGAGCACCGGCAACTATGAGT...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCGGCATCCCGCAGCACTaGGTAGCAGTCGTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAGIPQH*VAVVVV
Trigger: TACTACAACGACTGCTACGCAGTGCTGCGGGATGCC...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACTCCTCCCACGCACCCTaGCCCCGGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNSSHAP*PRHHSR
Trigger: GCGGCTGTGGTGCCGGGGGCAGGGTGCGTGGGAGGA...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCTCCTGGACGTGCTTCTaGTCCAGCAGCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPSWTCF*SSSSIF
Trigger: GAAGATGGAGCTGCTGGACCAGAAGCACGTCCAGGA...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGGCTCCGGGGGCAGTGTaGGCGCCCACAAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGAPGAV*APTRSR
Trigger: CCTGCTCCTTGTGGGCGCTCACACTGCCCCCGGAGC...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAAGGCCGCCGAGGTGTaGTGGGGACTGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGKAAEV*WGLDGP
Trigger: CGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTT...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCGCTCGCCTAGGGCAATaGAGCTGTATTCCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAARLGQ*SCIPRH
Trigger: ATGACGAGGAATACAGCTGCATTGCCCTAGGCGAGC...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCCGGGTCTCCAGGCCCTaGGGAGCTGCCTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: PGSGPEHLRSLNSCSPPARVSRP*GAASVA
Trigger: AGCGACAGAGGCAGCTCCCCAGGGCCTGGAGACCCG...GGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR TCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGAAGGCCGCCGAGGTGTaGTGGGGACTGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGKAAEV*WGLDGP
Trigger: CGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTT...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCACGCCAGCTGCCACTGTaGCGTCCAAGGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WPGSGPEHLRSLNSCSPPRQLPL*RPRLLG
Trigger: CCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCG...TGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR GCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACGGGGCGAGGCAAGGGTaGCCAGGAGGCATTGACCCC +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNGARQG*PGGIDP
Trigger: GGGGTCAATGCCTCCTGGGCACCCTTGCCTCGCCCC...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACGGGTCCCGGCCAGGCTaGTACCTGAACCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNGSRPG*YLNPPA
Trigger: GGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCC...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGGGCCAGGCTGGTACCTaGACCCACCTGCCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGGQAGT*THLPFH
Trigger: GTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCC...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp ATGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCGGCCAGGCTGGTACCTaGACCCACCTGCCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: MARLRPRASAVPELMFSTGQAGT*THLPFH
Trigger: GTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCC...GGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR GCA 90 bp GGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTTCCAGGGACATGCCCTaGTTGGGGTCCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSGPEHLRSLNSCSPPAGSRDMP*LGSACS
Trigger: GCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGA...ACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCTTCTCCACCAGCCGGTaGTTGACTTTCTTCAACACA +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAFSTSR*LTFFNT
Trigger: TGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAA...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGGGACGGCTCCCCAGCTaGCGTGTCTTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGGRLPS*RVFLLL
Trigger: GAGGAGGAGGAAGACACGGCAGCTGGGGAGCCGTCC...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGTCCCCCTTCACCTCCTaGATCATCTTCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQSPFTS*IIFATS
Trigger: GGAGGTGGCGAAGATGATTCAGGAGGTGAAGGGGGA...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGTACCTGAACCCACCTaGCGTTCCACCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WPGSGPEHLRSLNSCSPPVPEPT*RSTWRW
Trigger: CCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTAC...TGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR GCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGCAGGCCCTGGGGAGCTaGCTCTGTCGCTCACCGGAA +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGQALGS*LCRSPE
Trigger: TTCCGGTGAGCGACAGAGGCAGCTCCCCAGGGCCTG...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356976.8
CDS-3UTR GCA 90 bp CGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCCGGCAGGCCCTGGGGAGCTaGCTCTGTCGCTCACCGGAA +
Preference number: 4 (lower is better)
Translates to: RSSSSSLLTSPSLHRMARQALGS*LCRSPE
Trigger: TTCCGGTGAGCGACAGAGGCAGCTCCCCAGGGCCTG...CCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR GCA 90 bp CCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTCGCCAGCTGCCACTGTaGCGTCCAAGGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRASAVPELMFSTSRCLTRQLPL*RPRLLG
Trigger: CCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCG...AGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR GCA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGCAATGTCCAGGGACATaGCCTGCTTGGGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: RLRPRASAVPELMFSTSRQCPGT*PAWGPP
Trigger: AGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTG...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR GCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTCCTCCCACGCACCCTaGCCCCGGCACCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSSSHAP*PRHHSR
Trigger: GCGGCTGTGGTGCCGGGGGCAGGGTGCGTGGGAGGA...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCGGGTCCCGGCCAGGCTaGTACCTGAACCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: VRSSSSSLLTSPSLHRMAGSRPG*YLNPPA
Trigger: GGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCC...GGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR CCA 90 bp GTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCGCTCACCGGAAGCGTTaGTCCCACAGCCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VRSSSSSLLTSPSLHRMAAHRKR*SHSRVP
Trigger: CGGGACCCGGCTGTGGGACCAACGCTTCCGGTGAGC...GGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR CCA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGGGCCATAGGCCAATGTaGTGTGCGCCAGGTCTACCT +
Preference number: 4 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQGHRPM*CAPGLP
Trigger: AGGTAGACCTGGCGCACACCACATTGGCCTATGGCC...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGTCAGCTGTCCACGGCTaGCCCCACTCCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGSAVHG*PHSQQA
Trigger: AGCCTGCTGGGAGTGGGGCCAGCCGTGGACAGCTGA...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAVIIQV*KHGSES
Trigger: ACTCTCGGAACCATGTTTGCAGACTTGGATTATGAC...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGACTCATAGTTGCCGGTaGTCACCCGGTAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQTHSCR*SPGKGA
Trigger: AGCCCCTTTACCGGGTGAGCACCGGCAACTATGAGT...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGAGAGTTGGAGTGGGCTaGCTAACTGCCCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: RLRPRASAVPELMFSTSRRVGVG*LTAQLG
Trigger: ACCGAGCTGGGCAGTTAGCCAGCCCACTCCAACTCT...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CCA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGCATGGTTCCGAGAGTTaGAGTGGGCTGGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQHGSES*SGLANC
Trigger: GCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATG...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGTCGCTCGCAGCTGGCTaGGGCTCCCGCACCCCGATC +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMSLAAG*GSRTPI
Trigger: GATCGGGGTGCGGGAGCCCCAGCCAGCTGCGAGCGA...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTTCGCTCGCAGCTGGCTaGGGCTCCCGCACCCCGATC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPSLAAG*GSRTPI
Trigger: GATCGGGGTGCGGGAGCCCCAGCCAGCTGCGAGCGA...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACACGAGGCGCTGCAGCTaGAACACGATGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNTRRCS*NTMSWT
Trigger: CGTCCAGGACATCGTGTTCCAGCTGCAGCGCCTCGT...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTACCAAGCTCTCCCTCTaGCCGGGGAGCCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPTKLSL*PGSREG
Trigger: CCCCTCCCGGCTCCCCGGCCAGAGGGAGAGCTTGGT...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGGCTCCTCTAGCCTCTTaGCAAGCCCATCATTGCACA +
Preference number: 4 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQAPLAS*QAHHCT
Trigger: TGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGC...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTCGCCAGCTGCCACTGTaGCGTCCAAGGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPRQLPL*RPRLLG
Trigger: CCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCG...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGCAATGTCCAGGGACATaGCCTGCTTGGGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGQCPGT*PAWGPP
Trigger: AGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTG...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGGCCAGCAGGCCTTTATaGGTCGCCCCCTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMASRPL*VAPLRG
Trigger: GCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGC...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTGGGGCGAGGCAAGGGTaGCCAGGAGGCATTGACCCC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPGARQG*PGGIDP
Trigger: GGGGTCAATGCCTCCTGGGCACCCTTGCCTCGCCCC...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCGGGTCCCGGCCAGGCTaGTACCTGAACCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSGSRPG*YLNPPA
Trigger: GGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCC...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCGCTCACCGGAAGCGTTaGTCCCACAGCCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSAHRKR*SHSRVP
Trigger: CGGGACCCGGCTGTGGGACCAACGCTTCCGGTGAGC...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356976.8
CDS-3UTR CCA 90 bp TGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAAGAGTTGGAGTGGGCTaGCTAACTGCCCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: WPGSGPEHLRSLNSCSPPRVGVG*LTAQLG
Trigger: ACCGAGCTGGGCAGTTAGCCAGCCCACTCCAACTCT...TGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CCA 90 bp CCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCCATGGTTCCGAGAGTTaGAGTGGGCTGGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: PGSGPEHLRSLNSCSPPAHGSES*SGLANC
Trigger: GCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATG...GGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGAGGTGTGATGGGGACTaGACGGGCCGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMRCDGD*TGRSGA
Trigger: CGCCCCAGACCGGCCCGTCCAGTCCCCATCACACCT...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp ATGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCTCGGTAGGGGAATaGGGAACTGGATCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: MARLRPRASAVPELMFSTSSVGE*GTGSGR
Trigger: TCTCCCGGATCCAGTTCCCCATTCCCCTACCGAGCT...GGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR TCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGTCCCCCTTCACCTCCTaGATCATCTTCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGSPFTS*IIFATS
Trigger: GGAGGTGGCGAAGATGATTCAGGAGGTGAAGGGGGA...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAGCATCTGCGGTCCCTaGACTCATGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGSICGP*THVLHQ
Trigger: CTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCT...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTTCCAGGGACATGCCCTaGTTGGGGTCCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPSRDMP*LGSACS
Trigger: GCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGA...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGGGCGGTACTCATAGTTaGCGGTGCTCACCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGGGTHS*RCSPGK
Trigger: TTTACCGGGTGAGCACCGGCAACTATGAGTACCGCC...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACGGCATCCCGCAGCACTaGGTAGCAGTCGTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNGIPQH*VAVVVV
Trigger: TACTACAACGACTGCTACGCAGTGCTGCGGGATGCC...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTGGACGGCTCCCCAGCTaGCGTGTCTTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPGRLPS*RVFLLL
Trigger: GAGGAGGAGGAAGACACGGCAGCTGGGGAGCCGTCC...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGGCCGTCCAAGGCTGCTaGGGTGTTGTCAAATACCTG +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGAVQGC*GVVKYL
Trigger: CAGGTATTTGACAACACCCCAGCAGCCTTGGACGGC...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGTTCTCGATGCTGCGGTaGGCATCGGCGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGFSMLR*ASANFT
Trigger: TGTGAAGTTCGCCGATGCCCACCGCAGCATCGAGAA...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGGGCCATAGGCCAATGTaGTGTGCGCCAGGTCTACCT +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGGHRPM*CAPGLP
Trigger: AGGTAGACCTGGCGCACACCACATTGGCCTATGGCC...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAACTGGACGGGCCGGTCTaGGGCGAGGCAAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRELDGPV*GEARVP
Trigger: GGGCACCCTTGCCTCGCCCCAGACCGGCCCGTCCAG...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTTCCCCCTTCACCTCCTaGATCATCTTCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PRASAVPELMFSTSRCLTSPFTS*IIFATS
Trigger: GGAGGTGGCGAAGATGATTCAGGAGGTGAAGGGGGA...AGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR TCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACCCGTCAGCATCGGCTTaGTGGTTTTCAGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNPSASA*WFSEAE
Trigger: TTCGGCTTCTGAAAACCATCAAGCCGATGCTGACGG...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGACCGTCAGCATCGGCTTaGTGGTTTTCAGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGPSASA*WFSEAE
Trigger: TTCGGCTTCTGAAAACCATCAAGCCGATGCTGACGG...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGCCGGGATGGCTTTGTTaGGGTACGTGTTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGPGWLC*GTCSDP
Trigger: CGGATCTGAACACGTACCTCAACAAAGCCATCCCGG...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTGTGCCCAGGAGGCATTaGCCCCAACCTCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPVPRRH*PQPQLS
Trigger: GGACAGCTGAGGTTGGGGTCAATGCCTCCTGGGCAC...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTGTACCTGAACCCACCTaGCGTTCCACCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPVPEPT*RSTWRW
Trigger: CCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTAC...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGGTACCTGAACCCACCTaGCGTTCCACCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMVPEPT*RSTWRW
Trigger: CCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTAC...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGTGTGCCGTCCAAGGCTaGTGGGGTGTTGTCAAATAC +
Preference number: 4 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGCAVQG*WGVVKY
Trigger: GTATTTGACAACACCCCAGCAGCCTTGGACGGCACA...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCATGTGCCGTCCAAGGCTaGTGGGGTGTTGTCAAATAC +
Preference number: 4 (lower is better)
Translates to: WPGSGPEHLRSLNSCSPPCAVQG*WGVVKY
Trigger: GTATTTGACAACACCCCAGCAGCCTTGGACGGCACA...TGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR GCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCGCCAGCTGCCACTGTaGCGTCCAAGGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWRQLPL*RPRLLG
Trigger: CCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCG...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTAGCCCAGGTTCGCTGTaGGAGGACAGAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPSPGSL*EDRGAG
Trigger: CCCTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCT...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCACCCAAGTGCCTAAATaGCAACGCCACCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VRSSSSSLLTSPSLHRMATQVPK*QRHPSL
Trigger: GAGGGAGGGGTGGCGTTGGCATTTAGGCACTTGGGT...GGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR CCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCGGGTCTCCAGGCCCTaGGGAGCTGCCTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWRVSRP*GAASVA
Trigger: AGCGACAGAGGCAGCTCCCCAGGGCCTGGAGACCCG...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356976.8
CDS-3UTR CCA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACAGCTCGGTAGGGGAATaGGGAATAGGTACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNSSVGE*GIGTKG
Trigger: CCCCTTTGTACCTATTCCCCATTCCCCTACCGAGCT...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356976.8
CDS-3UTR CCA 90 bp TGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAAGCTCGGTAGGGGAATaGGGAATAGGTACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: WPGSGPEHLRSLNSCSPPSSVGE*GIGTKG
Trigger: CCCCTTTGTACCTATTCCCCATTCCCCTACCGAGCT...TGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR CCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGGCCGTCCAAGGCTGCTaGGGTGTTGTCAAATACCTG +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGAVQGC*GVVKYL
Trigger: CAGGTATTTGACAACACCCCAGCAGCCTTGGACGGC...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAGCTTGTTGTAGTGGATaGTCACCTCCCCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGACCSG*SPPPSP
Trigger: AGGTGAAGGGGGAGGTGACCATCCACTACAACAAGC...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGATGTAGTACTTGGACATaGTGGACACGAGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGCSTWT*WTRGAA
Trigger: TGCAGCGCCTCGTGTCCACCATGTCCAAGTACTACA...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCCCTCGTGTATCCCTaGACGGCTCCCCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWPLVYP*TAPQLP
Trigger: CGGCAGCTGGGGAGCCGTCCAGGGATACACGAGGGG...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGCGTTCCACCTGGCGGTaGCCGCGATTGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMRSTWR*PRLSRH
Trigger: GTGACGTGACAATCGCGGCCACCGCCAGGTGGAACG...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGACCTGCCGTTCCACCTaGCGGTGGCCGCGATTGTCA +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMTCRST*RWPRLS
Trigger: TGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGT...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR CCA 90 bp CAGGGACATGCCCTGCTTGGGGTCCGCCTGCAGCTTGTTGTAGTGGATGGTCACAGGGGAATGGGGAACTaGATCCGGGAGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QGHALLGVRLQLVVVDGHRGMGN*IRERKE
Trigger: CTCCTTTCTCTCCCGGATCCAGTTCCCCATTCCCCT...GTGACCATCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR TCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGACCACCAGCCGGTGCTTaGCTTTCTTCAACACAATGT +
Preference number: 4 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGPPAGA*LSSTQC
Trigger: ACATTGTGTTGAAGAAAGTCAAGCACCGGCTGGTGG...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp TCAGCGGTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGAGCATCTGCGGTCCCTaGACTCATGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SAVRSSSSSLLTSPSLHRSICGP*THVLHQ
Trigger: CTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCT...CCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGACCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR TCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGGCTCCTCTAGCCTCTTaGCAAGCCCATCATTGCACA +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGAPLAS*QAHHCT
Trigger: TGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGC...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGTGTGCCGTCCAAGGCTaGTGGGGTGTTGTCAAATAC +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGCAVQG*WGVVKY
Trigger: GTATTTGACAACACCCCAGCAGCCTTGGACGGCACA...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGTCCAGGGACATGCCCTaGTTGGGGTCCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWSRDMP*LGSACS
Trigger: GCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGA...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGACCAAGTCTGCAAACATaGTTCCGAGAGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGPSLQT*FRELEW
Trigger: CCACTCCAACTCTCGGAACCATGTTTGCAGACTTGG...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGAGGCAGGGACAGTACTaGGCCCCTCCTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMRQGQY*APPPML
Trigger: CAGCATTGGAGGAGGGGCCCAGTACTGTCCCTGCCT...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGCCCGTAGGAGGTTCTTaGTGTGTTCCGTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGPVGGS*CVPSSL
Trigger: AAGGGATGACGGAACACACCAAGAACCTCCTACGGG...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CATCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGACATCCTTGCGCATCTaGGAGAAGCGGGCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: HPGLCLFDTGPEPSPPSETSLRI*EKRARA
Trigger: GGCGCGCGCCCGCTTCTCCCAGATGCGCAAGGATGT...CTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTACGAGGCGCTGCAGCTaGAACACGATGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPTRRCS*NTMSWT
Trigger: CGTCCAGGACATCGTGTTCCAGCTGCAGCGCCTCGT...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAAGGTGTGATGGGGACTaGACGGGCCGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRERCDGD*TGRSGA
Trigger: CGCCCCAGACCGGCCCGTCCAGTCCCCATCACACCT...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CCAGGGACATGCCCTGCTTGGGGTCCGCCTGCAGCTTGTTGTAGTGGATGGTCAGCCGTCCAAGGCTGCTaGGGTGTTGTCAAATACAGT +
Preference number: 4 (lower is better)
Translates to: PGTCPAWGPPAACCSGWSAVQGC*GVVKYS
Trigger: ACTGTATTTGACAACACCCCAGCAGCCTTGGACGGC...TGACCATCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR TCA 90 bp CCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTCAACACTTCACCTCCTaGATCATCTTCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PRASAVPELMFSTSRCLTQHFTS*IIFATS
Trigger: GGAGGTGGCGAAGATGATTCAGGAGGTGAAGTGTTG...AGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR TCA 90 bp TCAGCGGTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGCCACCAGCCGGTGCTTaGCTTTCTTCAACACTTCAC +
Preference number: 4 (lower is better)
Translates to: SAVRSSSSSLLTSPSLHRPPAGA*LSSTLH
Trigger: GTGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGG...CCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGACCGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTCGAACTTCTCGATGCTaGGGTGGGCATCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPRTSRC*GGHRRT
Trigger: AGTTCGCCGATGCCCACCGCAGCATCGAGAAGTTCG...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTACGATGTCCTGGACGTaGTTCTGGTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPTMSWT*FWSSSS
Trigger: GGAGCTGCTGGACCAGAAGCACGTCCAGGACATCGT...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTAGAGTTGGAGTGGGCTaGCTAACTGCCCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPRVGVG*LTAQLG
Trigger: ACCGAGCTGGGCAGTTAGCCAGCCCACTCCAACTCT...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CAATGTCCAGGGACATGCCCTGCTTGGGGTCCGCCTGCAGCTTGTTGTAGTGGAGCTTGTTGTAGTGGATaGTCACCTCCCCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: QCPGTCPAWGPPAACCSGACCSG*SPPPSP
Trigger: AGGTGAAGGGGGAGGTGACCATCCACTACAACAAGC...TCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR CCA 90 bp CCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTCCCGTAGGAGGTTCTTaGTGTGTTCCGTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: PRASAVPELMFSTSRCLTPVGGS*CVPSSL
Trigger: AAGGGATGACGGAACACACCAAGAACCTCCTACGGG...AGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR CCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAACATCCTTGCGCATCTaGGAGAAGCGGGCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRETSLRI*EKRARA
Trigger: GGCGCGCGCCCGCTTCTCCCAGATGCGCAAGGATGT...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGAGTCGTTGTAGTACTTaGACATGGTGGACACGAGGC +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGSRCST*TWWTRG
Trigger: GCCTCGTGTCCACCATGTCCAAGTACTACAACGACT...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTCCGGGATGGCTTTGTTaGGGTACGTGTTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPPGWLC*GTCSDP
Trigger: CGGATCTGAACACGTACCTCAACAAAGCCATCCCGG...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: RLRPRASAVPELMFSTSRVIIQV*KHGSES
Trigger: ACTCTCGGAACCATGTTTGCAGACTTGGATTATGAC...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR GCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGTTCTCCACCAGCCGGTaGTTGACTTTCTTCAACACA +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGFSTSR*LTFFNT
Trigger: TGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAA...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp CGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCCGGTTCTCCACCAGCCGGTaGTTGACTTTCTTCAACACA +
Preference number: 4 (lower is better)
Translates to: RSSSSSLLTSPSLHRMARFSTSR*LTFFNT
Trigger: TGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAA...CCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR GCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGTGCCGAACTTCTCGATaGTGCGGTGGGCATCGGCGA +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWCRTSR*CGGHRR
Trigger: TCGCCGATGCCCACCGCAGCATCGAGAAGTTCGGCA...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGTTTTCAGAAGCCGAATaGCGAACTTCTCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGFSEAE*RTSRCC
Trigger: GCAGCATCGAGAAGTTCGGCATTCGGCTTCTGAAAA...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp CCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTCCAAGTCTGCAAACATaGTTCCGAGAGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PRASAVPELMFSTSRCLTPSLQT*FRELEW
Trigger: CCACTCCAACTCTCGGAACCATGTTTGCAGACTTGG...AGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGAGGCAGGGACAGTACTaGGCCCCTCCTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWRQGQY*APPPML
Trigger: CAGCATTGGAGGAGGGGCCCAGTACTGTCCCTGCCT...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTTCTCGATGCTGCGGTaGGCATCGGCGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSFSMLR*ASANFT
Trigger: TGTGAAGTTCGCCGATGCCCACCGCAGCATCGAGAA...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCAGTACTTGGACATGGTaGACACGAGGCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSSTWTW*TRGAAA
Trigger: AGCTGCAGCGCCTCGTGTCCACCATGTCCAAGTACT...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGAGTACTTGGACATGGTaGACACGAGGCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMSTWTW*TRGAAA
Trigger: AGCTGCAGCGCCTCGTGTCCACCATGTCCAAGTACT...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCCCTCCTCCAATGCTaGTCCCGATCAGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWPLLQC*SRSGSE
Trigger: CTCAGAACCTGATCGGGATCAGCATTGGAGGAGGGG...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp CAACACAATGTCCAGGGACATGCCCTGCTTGGGGTCCGCCTGCAGCTTGTTGTACCACCAGCCGGTGCTTaGCTTTCTTCAACACAATGT +
Preference number: 4 (lower is better)
Translates to: QHNVQGHALLGVRLQLVVPPAGA*LSSTQC
Trigger: ACATTGTGTTGAAGAAAGTCAAGCACCGGCTGGTGG...TACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR TCA 90 bp AGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCGCTCCTCTAGCCTCTTaGCAAGCCCATCATTGCACA +
Preference number: 4 (lower is better)
Translates to: RASAVPELMFSTSRCLTFAPLAS*QAHHCT
Trigger: TGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGC...GAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR GCA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGVIIQV*KHGSES
Trigger: ACTCTCGGAACCATGTTTGCAGACTTGGATTATGAC...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp AGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCTGTGCCGTCCAAGGCTaGTGGGGTGTTGTCAAATAC +
Preference number: 4 (lower is better)
Translates to: RASAVPELMFSTSRCLTFCAVQG*WGVVKY
Trigger: GTATTTGACAACACCCCAGCAGCCTTGGACGGCACA...GAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR GCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGACACGAGGCGCTaGAGCTGGAACACGATGTCC +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFREVDTRR*SWNTMS
Trigger: GGACATCGTGTTCCAGCTGCAGCGCCTCGTGTCCAC...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp CCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCTCCACCAGCCGGTaGTTGACTTTCTTCAACACT +
Preference number: 4 (lower is better)
Translates to: PRASAVPELMFSTSRCLTFSTSR*LTFFNT
Trigger: AGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAA...AGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR CCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTGCTTGTTGTAGTGGATaGTCACCTCCCCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPACCSG*SPPPSP
Trigger: AGGTGAAGGGGGAGGTGACCATCCACTACAACAAGC...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCCCCGTAGGAGGTTCTTaGTGTGTTCCGTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSPVGGS*CVPSSL
Trigger: AAGGGATGACGGAACACACCAAGAACCTCCTACGGG...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGTAGTACTTGGACATaGTGGACACGAGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSCSTWT*WTRGAA
Trigger: TGCAGCGCCTCGTGTCCACCATGTCCAAGTACTACA...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAACCAGGTCTACCTCGATaGGGAAGACGTCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFREPGLPR*GRRRHP
Trigger: GGGATGCCGACGTCTTCCCCATCGAGGTAGACCTGG...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR TCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGATCCCGATCAGGTTCTaGGCATCCTTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWIPIRF*ASFCRV
Trigger: GACCCTGCAGAAGGATGCTCAGAACCTGATCGGGAT...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAACGAACTTCTCGATGCTaGGGTGGGCATCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRERTSRC*GGHRRT
Trigger: AGTTCGCCGATGCCCACCGCAGCATCGAGAAGTTCG...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACTTTCTTCAACACAATGTCCAGGGACATGCCCTGCTTGGGGTCCGCCTGCAGCTTTAAGGAACCCAAGTaGCTAAATGCCAACGCCACC +
Preference number: 4 (lower is better)
Translates to: TFFNTMSRDMPCLGSACSFKEPK*LNANAT
Trigger: GGTGGCGTTGGCATTTAGGCACTTGGGTTCCTTAAA...GCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTGTGTTGAAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR CCA 90 bp CATCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGCATGGTTCCGAGAGTTaGAGTGGGCTGGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: HPGLCLFDTGPEPSPPSEHGSES*SGLANC
Trigger: GCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATG...CTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGCCAAGTCTGCAAACATaGTTCCGAGAGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMPSLQT*FRELEW
Trigger: CCACTCCAACTCTCGGAACCATGTTTGCAGACTTGG...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp AGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCCCAAGTCTGCAAACATaGTTCCGAGAGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RASAVPELMFSTSRCLTFPSLQT*FRELEW
Trigger: CCACTCCAACTCTCGGAACCATGTTTGCAGACTTGG...GAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CCA 90 bp CATCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGTCCTGGACGTGCTTCTaGTCCAGCAGCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: HPGLCLFDTGPEPSPPSESWTCF*SSSSIF
Trigger: GAAGATGGAGCTGCTGGACCAGAAGCACGTCCAGGA...CTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAAGCTCGGTAGGGGAATaGGGAACGGAAGCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRESSVGE*GTEALV
Trigger: GACCAACGCTTCCGTTCCCCATTCCCCTACCGAGCT...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR GCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGGCGGTACTCATAGTTaGCGGTGCTCACCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFREGGTHS*RCSPGK
Trigger: TTTACCGGGTGAGCACCGGCAACTATGAGTACCGCC...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTATTTGCTCCAATCCCTaGAGACAATCCTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TRSRARTPATSKSFLFLPICSNP*RQSFPS
Trigger: GGAAGGGAAGGATTGTCTGCAGGGATTGGAGCAAAT...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR CCA 90 bp GAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCTTCAACACTTCACCTCCTCATGGTTCCGAGAGTTaGAGTGGGCTGGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: ELMFSTSRCLTFFNTSPPHGSES*SGLANC
Trigger: GCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATG...AGGAGGTGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR TCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCACCAGCCGGTGCTTaGCTTTCTTCAACACAATGT +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWPPAGA*LSSTQC
Trigger: ACATTGTGTTGAAGAAAGTCAAGCACCGGCTGGTGG...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGAGTCGTTGTAGTACTTaGACATGGTGGACACGAGGC +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWSRCST*TWWTRG
Trigger: GCCTCGTGTCCACCATGTCCAAGTACTACAACGACT...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CCA 90 bp GAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCTTCAACACTTCACCTCCTGCCGTCCAAGGCTGCTaGGGTGTTGTCAAATACAGT +
Preference number: 4 (lower is better)
Translates to: ELMFSTSRCLTFFNTSPPAVQGC*GVVKYS
Trigger: ACTGTATTTGACAACACCCCAGCAGCCTTGGACGGC...AGGAGGTGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR GCA 90 bp CATCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGTTTTCAGAAGCCGAATaGCGAACTTCTCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: HPGLCLFDTGPEPSPPSEFSEAE*RTSRCC
Trigger: GCAGCATCGAGAAGTTCGGCATTCGGCTTCTGAAAA...CTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR GCA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAACCCCCACTGGATATTTaGTCCAATCCCTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SRFVFIRYRPRTQPSFREPPLDI*SNPCRQ
Trigger: TTGTCTGCAGGGATTGGAGCAAATATCCAGTGGGGG...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR CCA 90 bp GGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGAACGAGAACAAGTATTaGCGGAAGCTCGCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: GLCLFDTGPEPSPPSEKWNENKY*RKLAVS
Trigger: ACTAACAGCGAGCTTCCGCCAATACTTGTTCTCGTT...CCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR GCA 90 bp GAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCTTCAACACTTCACCTCCTGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: ELMFSTSRCLTFFNTSPPVIIQV*KHGSES
Trigger: ACTCTCGGAACCATGTTTGCAGACTTGGATTATGAC...AGGAGGTGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS GCA 90 bp CGCGCGCCTCCTGGCGGCAGCGCAGGATCAGGCGGTACTCATAGTTaGCGGTGCTCACCCGGTAAAGGGGCTCGCCTAGGGCCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: RAPPGGSAGSGGTHS*RCSPGKGARLGPGA
Trigger: CGCCCCAGGCCCTAGGCGAGCCCCTTTACCGGGTGAGCACCGGCAACTATGAGTACCGCCTGATCCTGCGCTGCCGCCAGGAGGCGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS-3UTR CAA 90 bp CAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCCCTGGCGGTGGCCGCGATaGTCACGTCACTTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: QAPQASRPLCVAPLRGGPWRWPR*SRHFRQ
Trigger: TTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCA...GGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CCA 90 bp TCGCTCACCGGAAGCGTTGGTCCCACAGCCGGGTCCCGGCCAGGCTaGTACCTGAACCCACCTGCCGTTCCACCTGGCGGTGGCCGCGAT +
Preference number: 5 (lower is better)
Translates to: SLTGSVGPTAGSRPG*YLNPPAVPPGGGRD
Trigger: ATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCCGGCTGTGGGACCAACGCTTCCGGTGAGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356976.8
ENST00000426258.5
ENST00000469819.5
ENST00000476157.5
CDS GCA 90 bp TGGTCCCACAGCCGGGTCCCGGCCAGGCTGGTACCTGAACCCACCTaGCGTTCCACCTGGCGGTGGCCGCGATTGTCACGTCACTTCCGG +
Preference number: 5 (lower is better)
Translates to: WSHSRVPARLVPEPT*RSTWRWPRLSRHFR
Trigger: CCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCCGGCTGTGGGACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CCA 90 bp ATGGGGAACGGAAGCGTTGGTCCCACAGCCGGGTCCCGGCCAGGCTaGTACCTGAACCCACCTGCCGTTCCACCTGGCGGTGGCCGCGAT +
Preference number: 5 (lower is better)
Translates to: MGNGSVGPTAGSRPG*YLNPPAVPPGGGRD
Trigger: ATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCCGGCTGTGGGACCAACGCTTCCGTTCCCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404072.7
ENST00000437453.5
CDS GCA 90 bp CGCGCGCCTCCTGGCGGCAGCGCAGGATCAGGCGGTACTCATAGTTaGCGGTGCTCACCCGGTAAAGGGGCTCGCCTAGGGCAATGCAGC +
Preference number: 5 (lower is better)
Translates to: RAPPGGSAGSGGTHS*RCSPGKGARLGQCS
Trigger: GCTGCATTGCCCTAGGCGAGCCCCTTTACCGGGTGAGCACCGGCAACTATGAGTACCGCCTGATCCTGCGCTGCCGCCAGGAGGCGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS CCA 90 bp CCGGCCAGGCTGGTACCTGAACCCACCTGCCGTTCCACCTGGCGGTaGCCGCGATTGTCACGTCACTTCCGGCAAGACGCGGAAGTCCCG +
Preference number: 5 (lower is better)
Translates to: PARLVPEPTCRSTWR*PRLSRHFRQDAEVP
Trigger: CGGGACTTCCGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CCA 90 bp CGGGTCCCGGCCAGGCTGGTACCTGAACCCACCTGCCGTTCCACCTaGCGGTGGCCGCGATTGTCACGTCACTTCCGGCAAGACGCGGAA +
Preference number: 5 (lower is better)
Translates to: RVPARLVPEPTCRST*RWPRLSRHFRQDAE
Trigger: TTCCGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CCA 90 bp ATCCAAGTCGGAAGCGTTGGTCCCACAGCCGGGTCCCGGCCAGGCTaGTACCTGAACCCACCTGCCGTTCCACCTGGCGGTGGCCGCGAT +
Preference number: 5 (lower is better)
Translates to: IQVGSVGPTAGSRPG*YLNPPAVPPGGGRD
Trigger: ATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCCGGCTGTGGGACCAACGCTTCCGACTTGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468288.5
CDS GCA 90 bp GGACGTGCTTCTGGTCCAGCAGCTCCATCTTCTCCAGCACATCCTTaGGCATCTGGGAGAAGCGGGCGCGCGCCTCCTGGCGGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: GRASGPAAPSSPAHP*ASGRSGRAPPGGSA
Trigger: TGCGCTGCCGCCAGGAGGCGCGCGCCCGCTTCTCCCAGATGCGCAAGGATGTGCTGGAGAAGATGGAGCTGCTGGACCAGAAGCACGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CCA 90 bp GTTCCCGGCCGGGTGCCCAGCACCCCGAGGCCCAGCGAGCGGGACTaGGAAGATGGCCCTAAATCTCCAGGAACGAGAGTCCAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: VPGRVPSTPRPSERD*EDGPKSPGTRVQPS
Trigger: ACTTGGCTGGACTCTCGTTCCTGGAGATTTAGGGCCATCTTCCCAGTCCCGCTCGCTGGGCCTCGGGGTGCTGGGCACCCGGCCGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS-3UTR CAA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACCGCTCACCGGAAGCGTaGGTCCCACAGCCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNRSPEA*VPQPGP
Trigger: GGGACCCGGCTGTGGGACCAACGCTTCCGGTGAGCG...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356976.8
CDS-3UTR CAA 90 bp GGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTCGCTCACCGGAAGCGTaGGTCCCACAGCCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GSGPEHLRSLNSCSPPAGRSPEA*VPQPGP
Trigger: GGGACCCGGCTGTGGGACCAACGCTTCCGGTGAGCG...ACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS-3UTR CAA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCGTGTCCGGGATGGCTTaGTTGAGGTACGTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAVSGMA*LRYVFR
Trigger: TCTGAACACGTACCTCAACAAAGCCATCCCGGACAC...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp TGGTGCCTGTCCTGGGCAGGAGCCCAGGTTCGCTGTGCGAGGACAGAGGAGCAGCACCAGCTTCCACCCTaGTCCAAGGGCCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: WCLSWAGAQVRCARTEEQHQLPP*SKGPAA
Trigger: GGCTGCTGGGCCCTTGGACAAGGGTGGAAGCTGGTG...CTGCTCCTCTGTCCTCGCACAGCGAACCTGGGCTCCTGCCCAGGACAGGCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS CCA 90 bp GCTGATCTAGATGTTCCCCGCAGGCCCATCGCAAATCCCAGCACCTaGGACCAGGCCCAGCCCAGAGGGAGCCTGAGGTCAGGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: ADLDVPRRPIANPST*DQAQPRGSLRSGAV
Trigger: CACAGCGCCTGACCTCAGGCTCCCTCTGGGCTGGGCCTGGTCCCAGGTGCTGGGATTTGCGATGGGCCTGCGGGGAACATCTAGATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472724.5
CDS-3UTR CAA 90 bp GGCAGGCGCCCCAAGCCAGCAGGCCTTTATGCGTCGCCCCCTTGCGCGGCGGCCAAGGCTGCTGGGGTGTaGTCAAATACCTGGACGATA +
Preference number: 5 (lower is better)
Translates to: GRRPKPAGLYASPPCAAAKAAGV*SNTWTI
Trigger: TATCGTCCAGGTATTTGACAACACCCCAGCAGCCTT...GGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCTGCTGGCTTGGGGCGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAGGGACATGCCCTGCTaGGGGTCCGCCTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGRDMPC*GSACSL
Trigger: CAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCT...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS CCA 90 bp CATGGAAGCCGAGGCGCTGGCCAATGTCCAGGGACATGCCCTGCTTaGGGTCCGCCTGCAGCTTGTTGTAGTGGATGGTCACCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: HGSRGAGQCPGTCPA*GPPAACCSGWSPPP
Trigger: AGGGGGAGGTGACCATCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTGGCCAGCGCCTCGGCTTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437453.5
CDS-3UTR CAA 90 bp CCAGGGACATGCCCTGCTTGGGGTCCGCCTGCAGCTTGTTGTAGTGGATGGTCAAGGGACATGCCCTGCTaGGGGTCCGCCTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PGTCPAWGPPAACCSGWSRDMPC*GSACSL
Trigger: CAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCT...TGACCATCCACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS GCA 90 bp CTTTGGGCCAGGGCCCATCCAGGGAGGCTGCTGGACACCCGTAACTaGTCTGACCAGCTTACCAATGTCCAGGGACATGCCCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LWARAHPGRLLDTRN*SDQLTNVQGHALLG
Trigger: CCCAAGCAGGGCATGTCCCTGGACATTGGTAAGCTGGTCAGAGCAGTTACGGGTGTCCAGCAGCCTCCCTGGATGGGCCCTGGCCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS-3UTR CAA 90 bp CCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGCCCGTAGGAGGTTCTaGGTGTGTTCCGTCATCCCT +
Preference number: 5 (lower is better)
Translates to: PGSGPEHLRSLNSCSPPAARRRF*VCSVIP
Trigger: AGGGATGACGGAACACACCAAGAACCTCCTACGGGC...GGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS GCA 90 bp CGCCAGGTCTACCTCGATGGGGAAGACGTCGGCATCCCGCAGCACTaGGTAGCAGTCGTTGTAGTACTTGGACATGGTGGACACGAGGCG +
Preference number: 5 (lower is better)
Translates to: RQVYLDGEDVGIPQH*VAVVVVLGHGGHEA
Trigger: CGCCTCGTGTCCACCATGTCCAAGTACTACAACGACTGCTACGCAGTGCTGCGGGATGCCGACGTCTTCCCCATCGAGGTAGACCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS GCA 90 bp TGGCTGTGGCACTTCTCCTTTGGGCCAGGGCCCATCCAGGGAGGCTaGTGGACACCCGTAACTGCTCTGACCAGCTTACCAATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: WLWHFSFGPGPIQGG*WTPVTALTSLPMSR
Trigger: CCTGGACATTGGTAAGCTGGTCAGAGCAGTTACGGGTGTCCAGCAGCCTCCCTGGATGGGCCCTGGCCCAAAGGAGAAGTGCCACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS CCA 90 bp TCTTGTCTCCTCGCCAGCCTCTGCTGCCACTGCTATTGTGTAAAGTaGGTTCCCTGGGGGAGGTTGGCTCTCCCAGAGCCACAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SCLLASLCCHCYCVK*VPWGRLALPEPQPG
Trigger: GCCTGGCTGTGGCTCTGGGAGAGCCAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS-3UTR CAA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGAACGGAAGCGTaGGTCCCACAGCCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSWGTEA*VPQPGP
Trigger: GGGACCCGGCTGTGGGACCAACGCTTCCGTTCCCCA...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS-3UTR CAA 90 bp CGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCCGGTTGACAAGCCCATCATaGCACAGGATGGCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: RSSSSSLLTSPSLHRMARLTSPS*HRMARL
Trigger: GAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAA...CCGGGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CAA 90 bp CCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCAGCTCCTCTAGCCTCTaGACAAGCCCATCATTGCAC +
Preference number: 5 (lower is better)
Translates to: PGSGPEHLRSLNSCSPPASSSSL*TSPSLH
Trigger: GTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCT...GGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CAA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGTGTTCCGTCATCCCTTaGTATAGCTCAGCGGTCCGC +
Preference number: 5 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGCSVIP*YSSAVR
Trigger: GCGGACCGCTGAGCTATACAAAGGGATGACGGAACA...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp ATGGCCCGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCTGTTCCGTCATCCCTTaGTATAGCTCAGCGGTCCGC +
Preference number: 5 (lower is better)
Translates to: MARLRPRASAVPELMFSTCSVIP*YSSAVR
Trigger: GCGGACCGCTGAGCTATACAAAGGGATGACGGAACA...GGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR CAA 90 bp TCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACGTCCAGGTACTTCTaGATGGTGAGGCGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SIQAQNPALLQRSGRAGGTSRYF*MVRRVS
Trigger: GGACACTCGCCTCACCATCAAGAAGTACCTGGACGT...TCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCCACCAGCTTCCACCCTaGTCCAAGGGCCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSHQLPP*SKGPAA
Trigger: GGCTGCTGGGCCCTTGGACAAGGGTGGAAGCTGGTG...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS TCA 90 bp GGACAGTACTGGGCCCCTCCTCCAATGCTGATCCCGATCAGGTTCTaGGCATCCTTCTGCAGGGTCACCTTCCCAGGCACAGTCGGGATT +
Preference number: 5 (lower is better)
Translates to: GQYWAPPPMLIPIRF*ASFCRVTFPGTVGI
Trigger: AATCCCGACTGTGCCTGGGAAGGTGACCCTGCAGAAGGATGCTCAGAACCTGATCGGGATCAGCATTGGAGGAGGGGCCCAGTACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS TCA 90 bp CTGGAAGAGCAGCACACACAGACTAGTGAGCGAGGCTCCACACCCTaGGCCCCTTCCCAGCCAAGACTGTTCTGGACTGAGACTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LEEQHTQTSERGSTP*APSQPRLFWTETPE
Trigger: CTCAGGAGTCTCAGTCCAGAACAGTCTTGGCTGGGAAGGGGCTCAGGGTGTGGAGCCTCGCTCACTAGTCTGTGTGTGCTGCTCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494434.1
CDS GCA 90 bp TCCCCAGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTGCTGCCACTaGTATTGTGTAAAGTGGGTTCCCTGGGGGAGGTTGGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: SPESESCLLASLCCH*YCVKWVPWGRLALP
Trigger: TGGGAGAGCCAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS GCA 90 bp CAGTGCTCCCCAGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTGCTaGCACTGCTATTGTGTAAAGTGGGTTCCCTGGGGGAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: QCSPESESCLLASLC*HCYCVKWVPWGRLA
Trigger: AGCCAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGGGGAGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS GCA 90 bp GGTGGGACAGGAGTGCCTGCTCAGGGACGGCCTCGCACCGCACTGTaGTTTCAAAGCCACGGCTGTTCTTCATTCCTGAGACCTCATTTC +
Preference number: 5 (lower is better)
Translates to: GGTGVPAQGRPRTAL*FQSHGCSSFLRPHF
Trigger: GAAATGAGGTCTCAGGAATGAAGAACAGCCGTGGCTTTGAAAGCACAGTGCGGTGCGAGGCCGTCCCTGAGCAGGCACTCCTGTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS CCA 90 bp CATCCCGCAGCACTGCGTAGCAGTCGTTGTAGTACTTGGACATGGTaGACACGAGGCGCTGCAGCTGGAACACGATGTCCTGGACGTGCT +
Preference number: 5 (lower is better)
Translates to: HPAALRSSRCSTWTW*TRGAAAGTRCPGRA
Trigger: AGCACGTCCAGGACATCGTGTTCCAGCTGCAGCGCCTCGTGTCCACCATGTCCAAGTACTACAACGACTGCTACGCAGTGCTGCGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CCA 90 bp AGACGTCGGCATCCCGCAGCACTGCGTAGCAGTCGTTGTAGTACTTaGACATGGTGGACACGAGGCGCTGCAGCTGGAACACGATGTCCT +
Preference number: 5 (lower is better)
Translates to: RRRHPAALRSSRCST*TWWTRGAAAGTRCP
Trigger: AGGACATCGTGTTCCAGCTGCAGCGCCTCGTGTCCACCATGTCCAAGTACTACAACGACTGCTACGCAGTGCTGCGGGATGCCGACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS-3UTR CAA 90 bp TTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAGCTCCTCTAGCCTCTaGACAAGCCCATCATTGCAC +
Preference number: 5 (lower is better)
Translates to: FDTGPEPSPPSEKWPSWGSSSSL*TSPSLH
Trigger: GTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCT...CCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGACGTCCAGGTACTTCTaGATGGTGAGGCGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGTSRYF*MVRRVS
Trigger: GGACACTCGCCTCACCATCAAGAAGTACCTGGACGT...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTCCACCAGCCGGTGCTaGACTTTCTTCAACACTTCA +
Preference number: 5 (lower is better)
Translates to: RLRPRASAVPELMFSTSRSTSRC*TFFNTS
Trigger: TGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGA...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS TCA 90 bp GGACGATATAGAGGCAGGGACAGTACTGGGCCCCTCCTCCAATGCTaGTCCCGATCAGGTTCTGAGCATCCTTCTGCAGGGTCACCTTCC +
Preference number: 5 (lower is better)
Translates to: GRYRGRDSTGPLLQC*SRSGSEHPSAGSPS
Trigger: GGAAGGTGACCCTGCAGAAGGATGCTCAGAACCTGATCGGGATCAGCATTGGAGGAGGGGCCCAGTACTGTCCCTGCCTCTATATCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS GCA 90 bp ACAAGTATTGGCGGAAGCTCGCTGAGGCTCGGGAAATGCTATCAGTaGTCCCCAGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TSIGGSSLRLGKCYQ*SPESESCLLASLCC
Trigger: GCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGGGGAGCACTGATAGCATTTCCCGAGCCTCAGCGAGCTTCCGCCAATACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS GCA 90 bp CAGATGCAGGGAGAGCACCGGGAGGCCTCCCAGGCCTTTCAGATTTaGTTGGTCAGAGGTCAGAGCCCACAGCCATGTAACTCTGGATTC +
Preference number: 5 (lower is better)
Translates to: QMQGEHREASQAFQI*LVRGQSPQPCNSGF
Trigger: GAATCCAGAGTTACATGGCTGTGGGCTCTGACCTCTGACCAAGCAAATCTGAAAGGCCTGGGAGGCCTCCCGGTGCTCTCCCTGCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS GCA 90 bp GAAACGCGGGGGAGTGAGAAACCAGGGACAGAGTACAAGAACAGATaGAGGGAGAGCACCGGGAGGCCTCCCAGGCCTTTCAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: ETRGSEKPGTEYKNR*RESTGRPPRPFRFA
Trigger: AGCAAATCTGAAAGGCCTGGGAGGCCTCCCGGTGCTCTCCCTGCATCTGTTCTTGTACTCTGTCCCTGGTTTCTCACTCCCCCGCGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS-3UTR CAA 90 bp GGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTTCCACCAGCCGGTGCTaGACTTTCTTCAACACAATG +
Preference number: 5 (lower is better)
Translates to: GSGPEHLRSLNSCSPPAGSTSRC*TFFNTM
Trigger: CATTGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGA...ACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432756.6
CDS-3UTR CAA 90 bp AGAATAAATAAAGGCCGCCGAGGTGTGATGGGGACTGGACGGGCCGGTCTGGGGAGCTCCTCTAGCCTCTaGACAAGCCCATCATTGCAC +
Preference number: 5 (lower is better)
Translates to: RINKGRRGVMGTGRAGLGSSSSL*TSPSLH
Trigger: GTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCT...CCCCAGACCGGCCCGTCCAGTCCCCATCACACCTCGGCGGCCTTTATTTATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS TCA 90 bp GAGCTCCTGGGAGAGCAGGGTCCATTGCTGCTTCAGTACAACAACTaGTCCACCGCTGAGAAGCAAGGGTCTGTGGGACTGGGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: ELLGEQGPLLLQYNN*STAEKQGSVGLGSP
Trigger: TGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGACCCTGCTCTCCCAGGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 90 bp TATCAGTGCTCCCCAGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTaGTGCCACTGCTATTGTGTAAAGTGGGTTCCCTGGGGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: YQCSPESESCLLASL*CHCYCVKWVPWGRL
Trigger: CAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGGGGAGCACTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS CCA 90 bp TTGATGGTTTTCAGAAGCCGAATGCCGAACTTCTCGATGCTGCGGTaGGCATCGGCGAACTTCACAAAAGCCTCGCTCGCAGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LMVFRSRMPNFSMLR*ASANFTKASLAAGW
Trigger: CCAGCCAGCTGCGAGCGAGGCTTTTGTGAAGTTCGCCGATGCCCACCGCAGCATCGAGAAGTTCGGCATTCGGCTTCTGAAAACCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000484021.5
CDS-3UTR CAA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAAGGGACATGCCCTGCTaGGGGTCCGCCTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRERDMPC*GSACSL
Trigger: CAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCT...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGTTGACAAGCCCATCATaGCACAGGATGGCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMLTSPS*HRMARL
Trigger: GAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAA...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp AGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTTGACTTTCTTGACAAGCCCATCATaGCACAGGATGGCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: RASAVPELMFSTSRCLTFLTSPS*HRMARL
Trigger: GAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAA...GAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CAA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCGCCCGTAGGAGGTTCTaGGTGTGTTCCGTCATCCCT +
Preference number: 5 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSARRRF*VCSVIP
Trigger: AGGGATGACGGAACACACCAAGAACCTCCTACGGGC...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTGCCCGTAGGAGGTTCTaGGTGTGTTCCGTCATCCCT +
Preference number: 5 (lower is better)
Translates to: TRSRARTPATSKSFLFLPARRRF*VCSVIP
Trigger: AGGGATGACGGAACACACCAAGAACCTCCTACGGGC...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTTTCTCCAGCACATCCTaGCGCATCTGGGAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: TRSRARTPATSKSFLFLPFSSTS*RIWEKR
Trigger: CCGCTTCTCCCAGATGCGCAAGGATGTGCTGGAGAA...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGTTCTCCAGCACATCCTaGCGCATCTGGGAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMFSSTS*RIWEKR
Trigger: CCGCTTCTCCCAGATGCGCAAGGATGTGCTGGAGAA...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGAAGGCTGCTGGGGTGTaGTCAAATACAGTTTATCCT +
Preference number: 5 (lower is better)
Translates to: RLRPRASAVPELMFSTSRKAAGV*SNTVYP
Trigger: AGGATAAACTGTATTTGACAACACCCCAGCAGCCTT...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS GCA 90 bp ACTGGATCCGGGAGAGAAAGGAGCATAGGATTTAAGGAACCCAAGTaGCTAAATGCCAACGCCACCCCTCCCTCCACCACCTCATACGGG +
Preference number: 5 (lower is better)
Translates to: TGSGRERSIGFKEPK*LNANATPPSTTSYG
Trigger: CCCGTATGAGGTGGTGGAGGGAGGGGTGGCGTTGGCATTTAGGCACTTGGGTTCCTTAAATCCTATGCTCCTTTCTCTCCCGGATCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432756.6
ENST00000435166.1
CDS-3UTR CAA 90 bp CGGCTCAGGCCCAGAGCATCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGACCTTAGTTTTCCCTTaGATTGACCTGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: RLRPRASAVPELMFSTSRTLVFP*IDLPLT
Trigger: TGTCAATGGCAGGTCAATCAAAGGGAAAACTAAGGT...CCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGATGCTCTGGGCCTGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CAA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGTGTTCCGTCATCCCTTaGTATAGCTCAGCGGTCCGC +
Preference number: 5 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMCSVIP*YSSAVR
Trigger: GCGGACCGCTGAGCTATACAAAGGGATGACGGAACA...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS TCA 90 bp AGAGCAGGGTCCATTGCTGCTTCAGTACAACAACTGATCCACCGCTaGGAAGCAAGGGTCTGTGGGACTGGGAAGTCCAGGGAAATGAGG +
Preference number: 5 (lower is better)
Translates to: RAGSIAASVQQLIHR*EARVCGTGKSREMR
Trigger: CCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGACCCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 90 bp AGCCCCCTACAAATAGTGAGCTCCTGGGAGAGCAGGGTCCATTGCTaGTTCAGTACAACAACTGATCCACCGCTGAGAAGCAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SPLQIVSSWESRVHC*FSTTTDPPLRSKGL
Trigger: CAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGACCCTGCTCTCCCAGGAGCTCACTATTTGTAGGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 90 bp CACAGCCCCCTACAAATAGTGAGCTCCTGGGAGAGCAGGGTCCATTaGTGCTTCAGTACAACAACTGATCCACCGCTGAGAAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: HSPLQIVSSWESRVH*CFSTTTDPPLRSKG
Trigger: ACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGACCCTGCTCTCCCAGGAGCTCACTATTTGTAGGGGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CCA 90 bp TTCCCGGCTCCCGGGACGCTCGGAACCAAGAACGAGAACAAGTATTaGCGGAAGCTCGCTGTTAGTAGGAACAAGCGAAAACAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: FPAPGTLGTKNENKY*RKLAVSRNKRKQRN
Trigger: GTTCCTCTGTTTTCGCTTGTTCCTACTAACAGCGAGCTTCCGCCAATACTTGTTCTCGTTCTTGGTTCCGAGCGTCCCGGGAGCCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404072.7
ENST00000424694.5
CDS-3UTR CAA 90 bp GATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTGGGGGAACACCTTAGTTTTCCCTTaGATTGACCTGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: DTGPEPSPPSEKWPSWGNTLVFP*IDLPLT
Trigger: TGTCAATGGCAGGTCAATCAAAGGGAAAACTAAGGT...GTTCCCCCAGCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp ACAAGGAGCAGGGCTCGGACTCCTGCCACCTCCAAGTCCTTTCTTTTCCTTCCTTCCGTCAGCATCGGCTaGATGGTTTTCAGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: TRSRARTPATSKSFLFLPSVSIG*MVFRSR
Trigger: TCGGCTTCTGAAAACCATCAAGCCGATGCTGACGGA...AGGAAGGAAAAGAAAGGACTTGGAGGTGGCAGGAGTCCGAGCCCTGCTCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp TGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAGTGGCCGAGCTCCGGGATGGCTTTGTaGAGGTACGTGTTCAGATCC +
Preference number: 5 (lower is better)
Translates to: CLFDTGPEPSPPSEKWPSSGMAL*RYVFRS
Trigger: GGATCTGAACACGTACCTCAACAAAGCCATCCCGGA...GCTCGGCCACTTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS TCA 90 bp ACCGCTGAGAAGCAAGGGTCTGTGGGACTGGGAAGTCCAGGGAAATaGGGAACTTGGGGCTCCTATACTGCTGGAACTTGGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: TAEKQGSVGLGSPGK*GTWGSYTAGTWGNK
Trigger: TTTATTCCCCCAAGTTCCAGCAGTATAGGAGCCCCAAGTTCCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CCA 90 bp AGTACAACAACTGATCCACCGCTGAGAAGCAAGGGTCTGTGGGACTaGGAAGTCCAGGGAAATGAGGAACTTGGGGCTCCTATACTGCTG +
Preference number: 5 (lower is better)
Translates to: STTTDPPLRSKGLWD*EVQGNEELGAPILL
Trigger: CAGCAGTATAGGAGCCCCAAGTTCCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS-3UTR CAA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGTTGATTGACCTGCCATaGACACCGGTGATCTCATCG +
Preference number: 5 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMLIDLP*TPVISS
Trigger: CGATGAGATCACCGGTGTCAATGGCAGGTCAATCAA...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp GAGAAGTGGCCGAGCTGGGGGAACAGAATAAATAAAGGCCGCCGAGGTGTGATGTCCACCAGCCGGTGCTaGACTTTCTTCAACACAATG +
Preference number: 5 (lower is better)
Translates to: EKWPSWGNRINKGRRGVMSTSRC*TFFNTM
Trigger: CATTGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGA...CATCACACCTCGGCGGCCTTTATTTATTCTGTTCCCCCAGCTCGGCCACTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAATTGACAAGCCCATCATaGCACAGGATGGCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRELTSPS*HRMARL
Trigger: GAGCCGGGCCATCCTGTGCAATGATGGGCTTGTCAA...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp GTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCAAGGCTGCTGGGGTGTaGTCAAATACAGTTTATCCT +
Preference number: 5 (lower is better)
Translates to: VRSSSSSLLTSPSLHRMAKAAGV*SNTVYP
Trigger: AGGATAAACTGTATTTGACAACACCCCAGCAGCCTT...GGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS CCA 90 bp TGCTTCAGTACAACAACTGATCCACCGCTGAGAAGCAAGGGTCTGTaGGACTGGGAAGTCCAGGGAAATGAGGAACTTGGGGCTCCTATA +
Preference number: 5 (lower is better)
Translates to: CFSTTTDPPLRSKGL*DWEVQGNEELGAPI
Trigger: TATAGGAGCCCCAAGTTCCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS-3UTR CAA 90 bp GTCCGCTCCAGCTCCTCTAGCCTCTTGACAAGCCCATCATTGCACAGGATGGCCACCTTAGTTTTCCCTTaGATTGACCTGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: VRSSSSSLLTSPSLHRMATLVFP*IDLPLT
Trigger: TGTCAATGGCAGGTCAATCAAAGGGAAAACTAAGGT...GGCCATCCTGTGCAATGATGGGCTTGTCAAGAGGCTAGAGGAGCTGGAGCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS-3UTR CAA 90 bp CATCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGTCCGGGATGGCTTTGTaGAGGTACGTGTTCAGATCC +
Preference number: 5 (lower is better)
Translates to: HPGLCLFDTGPEPSPPSESGMAL*RYVFRS
Trigger: GGATCTGAACACGTACCTCAACAAAGCCATCCCGGA...CTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp CATCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGGTGTCCGGGATGGCTTaGTTGAGGTACGTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: HPGLCLFDTGPEPSPPSEVSGMA*LRYVFR
Trigger: TCTGAACACGTACCTCAACAAAGCCATCCCGGACAC...CTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS-3UTR CAA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAATCCGTCAGCATCGGCTaGATGGTTTTCAGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRESVSIG*MVFRSR
Trigger: TCGGCTTCTGAAAACCATCAAGCCGATGCTGACGGA...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS GCA 90 bp AGTCGGGATTCCGAGTTTATCCTCTTCGATGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGTTGGAGTGGGCTGGCTAACTGCCCA +
Preference number: 5 (lower is better)
Translates to: SRDSEFILFDVIIQV*KHGSESWSGLANCP
Trigger: TGGGCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACTCGGAATCCCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000445628.5
ENST00000466374.1
ENST00000469819.5
ENST00000484021.5
CDS-3UTR CAA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAAAGGCTGCTGGGGTGTaGTCAAATACCTGGACGATA +
Preference number: 5 (lower is better)
Translates to: SRFVFIRYRPRTQPSFREKAAGV*SNTWTI
Trigger: TATCGTCCAGGTATTTGACAACACCCCAGCAGCCTT...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS GCA 90 bp AAGCTTTCCTTGACCATCCCAGCAGAAGCACTGCTCCATCTGCTTTaGTCTTCTTGTCACCAAGTCATGCTAATAGTGCCCTTATGGCAC +
Preference number: 5 (lower is better)
Translates to: KLSLTIPAEALLHLL*SSCHQVMLIVPLWH
Trigger: GTGCCATAAGGGCACTATTAGCATGACTTGGTGACAAGAAGAGCAAAGCAGATGGAGCAGTGCTTCTGCTGGGATGGTCAAGGAAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS-3UTR CAA 90 bp TCCAGGTTTGTGTTTATTCGATACAGGCCCAGAACCCAGCCCTCCTTCAGAGAAACCTTAGTTTTCCCTTaGATTGACCTGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: SRFVFIRYRPRTQPSFRETLVFP*IDLPLT
Trigger: TGTCAATGGCAGGTCAATCAAAGGGAAAACTAAGGT...TTCTCTGAAGGAGGGCTGGGTTCTGGGCCTGTATCGAATAAACACAAACCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356976.8
ENST00000404072.7
CDS TCA 90 bp TGCTCTTCTTGTCACCAAGTCATGCTAATAGTGCCCTTATGGCACTaGGCTGTGATTATCCCTTTAACTGTCCACAGCCCCCTACAAATA +
Preference number: 5 (lower is better)
Translates to: CSSCHQVMLIVPLWH*AVIIPLTVHSPLQI
Trigger: TATTTGTAGGGGGCTGTGGACAGTTAAAGGGATAATCACAGCTCAGTGCCATAAGGGCACTATTAGCATGACTTGGTGACAAGAAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 90 bp TGTTGTCAAATACAGTTTATCCTCTTCGATGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGTTGGAGTGGGCTGGCTAACTGCCCA +
Preference number: 5 (lower is better)
Translates to: CCQIQFILFDVIIQV*KHGSESWSGLANCP
Trigger: TGGGCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACTGTATTTGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS TCA 90 bp TGCTTTCAAAGCCACGGCTGTTCTTCATTCCTGAGACCTCATTTCTaGGACTTCAGTGTTTCTCAGAAGCACTCAGTGATAGCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: CFQSHGCSSFLRPHF*DFSVSQKHSVIALK
Trigger: CTTCAAAGCTATCACTGAGTGCTTCTGAGAAACACTGAAGTCTCAGAAATGAGGTCTCAGGAATGAAGAACAGCCGTGGCTTTGAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS GCA 90 bp ATAAAATACTCACAGTTTATCCTCTTCGATGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGTTGGAGTGGGCTGGCTAACTGCCCA +
Preference number: 5 (lower is better)
Translates to: IKYSQFILFDVIIQV*KHGSESWSGLANCP
Trigger: TGGGCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACTGTGAGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 72 bp AGCCGGGTCCCGGCCAGGCTGGTACCTGAACCCACCTaGCGTTCCACCTGGCGGTGGCCGCGATTGTCACGT +
Preference number: 6 (lower is better)
Translates to: SRVPARLVPEPT*RSTWRWPRLSR
Trigger: ACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGCCGGGACCCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404072.7
ENST00000437453.5
CDS CCA 72 bp CCGATTTCCCTCCAAGAGTCCCCCAGACTGAGGGAGTaGTTCCCGGCCGGGTGCCCAGCACCCCGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: PISLQESPRLRE*FPAGCPAPRGP
Trigger: TGGGCCTCGGGGTGCTGGGCACCCGGCCGGGAACCACTCCCTCAGTCTGGGGGACTCTTGGAGGGAAATCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS CAA 90 bp GCACCACAGCCGCGGGGCACTCAGGAGTCACACCAGCTTCCACCCTaGTCCAAGGGCCCAGCAGCCCCTCGTGTATCCCTGGACGGCTCC +
Preference number: 6 (lower is better)
Translates to: APQPRGTQESHQLPP*SKGPAAPRVSLDGS
Trigger: GGAGCCGTCCAGGGATACACGAGGGGCTGCTGGGCCCTTGGACAAGGGTGGAAGCTGGTGTGACTCCTGAGTGCCCCGCGGCTGTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS GCA 72 bp CCTGGCGGCAGCGCAGGATCAGGCGGTACTCATAGTTaGCGGTGCTCACCCGGTAAAGGGGCTCGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: PGGSAGSGGTHS*RCSPGKGARLG
Trigger: CCCTAGGCGAGCCCCTTTACCGGGTGAGCACCGGCAACTATGAGTACCGCCTGATCCTGCGCTGCCGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CCA 72 bp CCTTGTCCAAGGGCCCAGCAGCCCCTCGTGTATCCCTaGACGGCTCCCCAGCTGCCGTGTCTTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PCPRAQQPLVYP*TAPQLPCLPPP
Trigger: AGGAGGAGGAAGACACGGCAGCTGGGGAGCCGTCCAGGGATACACGAGGGGCTGCTGGGCCCTTGGACAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CCA 72 bp CGGGTGCCCAGCACCCCGAGGCCCAGCGAGCGGGACTaGGAAGATGGCCCTAAATCTCCAGGAACGAGAGTC +
Preference number: 6 (lower is better)
Translates to: RVPSTPRPSERD*EDGPKSPGTRV
Trigger: GACTCTCGTTCCTGGAGATTTAGGGCCATCTTCCCAGTCCCGCTCGCTGGGCCTCGGGGTGCTGGGCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS CAA 72 bp GAACCCACCTGCCGTTCCACCTGGCGGTGGCCGCGATaGTCACGTCACTTCCGGCAAGACGCGGAAGTCCCG +
Preference number: 6 (lower is better)
Translates to: EPTCRSTWRWPR*SRHFRQDAEVP
Trigger: CGGGACTTCCGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CAA 90 bp CTGGTACCTGAACCCACCTGCCGTTCCACCTGGCGGTGGCCGCGATaGTCACGTCACTTCCGGCAAGACGCGGAAGTCCCGGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: LVPEPTCRSTWRWPR*SRHFRQDAEVPAFP
Trigger: GGGGAAAGCCGGGACTTCCGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CAA 90 bp GGTAGGGGAATGGGGAACTGCCGTTCCACCTGGCGGTGGCCGCGATaGTCACGTCACTTCCGGCAAGACGCGGAAGTCCCGGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: GRGMGNCRSTWRWPR*SRHFRQDAEVPAFP
Trigger: GGGGAAAGCCGGGACTTCCGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGTTCCCCATTCCCCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424694.5
ENST00000445628.5
ENST00000484021.5
CDS CCA 72 bp TCGGCGAACTTCACAAAAGCCTCGCTCGCAGCTGGCTaGGGCTCCCGCACCCCGATCACGGAGAACACGTCC +
Preference number: 6 (lower is better)
Translates to: SANFTKASLAAG*GSRTPITENTS
Trigger: GGACGTGTTCTCCGTGATCGGGGTGCGGGAGCCCCAGCCAGCTGCGAGCGAGGCTTTTGTGAAGTTCGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000484021.5
CDS CCA 72 bp GCCAGGCTGGTACCTGAACCCACCTGCCGTTCCACCTaGCGGTGGCCGCGATTGTCACGTCACTTCCGGCAA +
Preference number: 6 (lower is better)
Translates to: ARLVPEPTCRST*RWPRLSRHFRQ
Trigger: TTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGGTGGGTTCAGGTACCAGCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404072.7
CDS CCA 72 bp GGTAGGGGAATGGGGAACTGCCGTTCCACCTGGCGGTaGCCGCGATTGTCACGTCACTTCCGGCAAGACGCG +
Preference number: 6 (lower is better)
Translates to: GRGMGNCRSTWR*PRLSRHFRQDA
Trigger: CGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGTTCCCCATTCCCCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424694.5
ENST00000445628.5
ENST00000484021.5
CDS CAA 72 bp ATGGGGAACTGCCGTTCCACCTGGCGGTGGCCGCGATaGTCACGTCACTTCCGGCAAGACGCGGAAGTCCCG +
Preference number: 6 (lower is better)
Translates to: MGNCRSTWRWPR*SRHFRQDAEVP
Trigger: CGGGACTTCCGCGTCTTGCCGGAAGTGACGTGACAATCGCGGCCACCGCCAGGTGGAACGGCAGTTCCCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424694.5
ENST00000445628.5
ENST00000484021.5
CDS GCA 72 bp CATGGAAGCCGAGGCGCTGGCCAATGTCCAGGGACATaGCCTGCTTGGGGTCCGCCTGCAGCTTGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: HGSRGAGQCPGT*PAWGPPAACCS
Trigger: ACTACAACAAGCTGCAGGCGGACCCCAAGCAGGGCATGTCCCTGGACATTGGCCAGCGCCTCGGCTTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437453.5
CDS CCA 72 bp CATAGGCCAATGTGGTGTGCGCCAGGTCTACCTCGATaGGGAAGACGTCGGCATCCCGCAGCACTGCGTAGC +
Preference number: 6 (lower is better)
Translates to: HRPMWCAPGLPR*GRRRHPAALRS
Trigger: GCTACGCAGTGCTGCGGGATGCCGACGTCTTCCCCATCGAGGTAGACCTGGCGCACACCACATTGGCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CAA 90 bp CTCTGCTGCCACTGCTATTGTGTAAAGTGGGTTCCCTGGGGGAGGTaGGCTCTCCCAGAGCCACAGCCAGGCATCCACCTCATCCGGCAG +
Preference number: 6 (lower is better)
Translates to: LCCHCYCVKWVPWGR*ALPEPQPGIHLIRQ
Trigger: CTGCCGGATGAGGTGGATGCCTGGCTGTGGCTCTGGGAGAGCCAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS GCA 72 bp GGCGGAAGCTCGCTGAGGCTCGGGAAATGCTATCAGTaGTCCCCAGAGTCCGAATCTTGTCTCCTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: GGSSLRLGKCYQ*SPESESCLLAS
Trigger: GCTGGCGAGGAGACAAGATTCGGACTCTGGGGAGCACTGATAGCATTTCCCGAGCCTCAGCGAGCTTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS GCA 72 bp AGGGCCCATCCAGGGAGGCTGCTGGACACCCGTAACTaGTCTGACCAGCTTACCAATGTCCAGGGACATGCC +
Preference number: 6 (lower is better)
Translates to: RAHPGRLLDTRN*SDQLTNVQGHA
Trigger: GGCATGTCCCTGGACATTGGTAAGCTGGTCAGAGCAGTTACGGGTGTCCAGCAGCCTCCCTGGATGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS GCA 72 bp CACTTCTCCTTTGGGCCAGGGCCCATCCAGGGAGGCTaGTGGACACCCGTAACTGCTCTGACCAGCTTACCA +
Preference number: 6 (lower is better)
Translates to: HFSFGPGPIQGG*WTPVTALTSLP
Trigger: TGGTAAGCTGGTCAGAGCAGTTACGGGTGTCCAGCAGCCTCCCTGGATGGGCCCTGGCCCAAAGGAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS CCA 72 bp CTCGCCAGCCTCTGCTGCCACTGCTATTGTGTAAAGTaGGTTCCCTGGGGGAGGTTGGCTCTCCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: LASLCCHCYCVK*VPWGRLALPEP
Trigger: TGGCTCTGGGAGAGCCAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS TCA 72 bp TGGGCCCCTCCTCCAATGCTGATCCCGATCAGGTTCTaGGCATCCTTCTGCAGGGTCACCTTCCCAGGCACA +
Preference number: 6 (lower is better)
Translates to: WAPPPMLIPIRF*ASFCRVTFPGT
Trigger: TGTGCCTGGGAAGGTGACCCTGCAGAAGGATGCTCAGAACCTGATCGGGATCAGCATTGGAGGAGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS TCA 72 bp AGAGGCAGGGACAGTACTGGGCCCCTCCTCCAATGCTaGTCCCGATCAGGTTCTGAGCATCCTTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RGRDSTGPLLQC*SRSGSEHPSAG
Trigger: CCCTGCAGAAGGATGCTCAGAACCTGATCGGGATCAGCATTGGAGGAGGGGCCCAGTACTGTCCCTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS TCA 72 bp CAGCACACACAGACTAGTGAGCGAGGCTCCACACCCTaGGCCCCTTCCCAGCCAAGACTGTTCTGGACTGAG +
Preference number: 6 (lower is better)
Translates to: QHTQTSERGSTP*APSQPRLFWTE
Trigger: CTCAGTCCAGAACAGTCTTGGCTGGGAAGGGGCTCAGGGTGTGGAGCCTCGCTCACTAGTCTGTGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494434.1
CDS GCA 72 bp GGAGAGCACCGGGAGGCCTCCCAGGCCTTTCAGATTTaGTTGGTCAGAGGTCAGAGCCCACAGCCATGTAAC +
Preference number: 6 (lower is better)
Translates to: GEHREASQAFQI*LVRGQSPQPCN
Trigger: GTTACATGGCTGTGGGCTCTGACCTCTGACCAAGCAAATCTGAAAGGCCTGGGAGGCCTCCCGGTGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS GCA 72 bp GGGAGTGAGAAACCAGGGACAGAGTACAAGAACAGATaGAGGGAGAGCACCGGGAGGCCTCCCAGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: GSEKPGTEYKNR*RESTGRPPRPF
Trigger: GAAAGGCCTGGGAGGCCTCCCGGTGCTCTCCCTGCATCTGTTCTTGTACTCTGTCCCTGGTTTCTCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS GCA 72 bp GGAGTGCCTGCTCAGGGACGGCCTCGCACCGCACTGTaGTTTCAAAGCCACGGCTGTTCTTCATTCCTGAGA +
Preference number: 6 (lower is better)
Translates to: GVPAQGRPRTAL*FQSHGCSSFLR
Trigger: TCTCAGGAATGAAGAACAGCCGTGGCTTTGAAAGCACAGTGCGGTGCGAGGCCGTCCCTGAGCAGGCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484021.5
CDS CAA 90 bp AGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTGCTGCCACTGCTATaGTGTAAAGTGGGTTCCCTGGGGGAGGTTGGCTCTCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RVRILSPRQPLLPLL*CKVGSLGEVGSPRA
Trigger: GGCTCTGGGAGAGCCAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS CAA 90 bp ATGCAGGGAGAGCACCGGGAGGCCTCCCAGGCCTTTCAGATTTGCTaGGTCAGAGGTCAGAGCCCACAGCCATGTAACTCTGGATTCTCC +
Preference number: 6 (lower is better)
Translates to: MQGEHREASQAFQIC*VRGQSPQPCNSGFS
Trigger: GGAGAATCCAGAGTTACATGGCTGTGGGCTCTGACCTCTGACCAAGCAAATCTGAAAGGCCTGGGAGGCCTCCCGGTGCTCTCCCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS GCA 72 bp CCAGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTGCTaGCACTGCTATTGTGTAAAGTGGGTTCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PESESCLLASLC*HCYCVKWVPWG
Trigger: CCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS CAA 72 bp GAGCACCGGGAGGCCTCCCAGGCCTTTCAGATTTGCTaGGTCAGAGGTCAGAGCCCACAGCCATGTAACTCT +
Preference number: 6 (lower is better)
Translates to: EHREASQAFQIC*VRGQSPQPCNS
Trigger: AGAGTTACATGGCTGTGGGCTCTGACCTCTGACCAAGCAAATCTGAAAGGCCTGGGAGGCCTCCCGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466374.1
CDS GCA 72 bp TACCTCGATGGGGAAGACGTCGGCATCCCGCAGCACTaGGTAGCAGTCGTTGTAGTACTTGGACATGGTGGA +
Preference number: 6 (lower is better)
Translates to: YLDGEDVGIPQH*VAVVVVLGHGG
Trigger: TCCACCATGTCCAAGTACTACAACGACTGCTACGCAGTGCTGCGGGATGCCGACGTCTTCCCCATCGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS GCA 72 bp TCCGAATCTTGTCTCCTCGCCAGCCTCTGCTGCCACTaGTATTGTGTAAAGTGGGTTCCCTGGGGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: SESCLLASLCCH*YCVKWVPWGRL
Trigger: CAACCTCCCCCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS GCA 72 bp TCCCCAGAGTCCGAATCTTGTCTCCTCGCCAGCCTCTaGTGCCACTGCTATTGTGTAAAGTGGGTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: SPESESCLLASL*CHCYCVKWVPW
Trigger: CCAGGGAACCCACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS CCA 72 bp CTCATCGCCAGCTGCCACTGTGCCGTCCAAGGCTGCTaGGGTGTTGTCAAATACCTGGACGATATAGAGGCA +
Preference number: 6 (lower is better)
Translates to: LIASCHCAVQGC*GVVKYLDDIEA
Trigger: TGCCTCTATATCGTCCAGGTATTTGACAACACCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS CCA 72 bp TTCAGAAGCCGAATGCCGAACTTCTCGATGCTGCGGTaGGCATCGGCGAACTTCACAAAAGCCTCGCTCGCA +
Preference number: 6 (lower is better)
Translates to: FRSRMPNFSMLR*ASANFTKASLA
Trigger: TGCGAGCGAGGCTTTTGTGAAGTTCGCCGATGCCCACCGCAGCATCGAGAAGTTCGGCATTCGGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000484021.5
CDS CCA 72 bp GCACTGCGTAGCAGTCGTTGTAGTACTTGGACATGGTaGACACGAGGCGCTGCAGCTGGAACACGATGTCCT +
Preference number: 6 (lower is better)
Translates to: ALRSSRCSTWTW*TRGAAAGTRCP
Trigger: AGGACATCGTGTTCCAGCTGCAGCGCCTCGTGTCCACCATGTCCAAGTACTACAACGACTGCTACGCAGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CCA 72 bp AAGTCTGCAAACATGGTTCCGAGAGTTGGAGTGGGCTaGCTAACTGCCCAGCTCGGTAGGGGAATGGGGAAC +
Preference number: 6 (lower is better)
Translates to: KSANMVPRVGVG*LTAQLGRGMGN
Trigger: GTTCCCCATTCCCCTACCGAGCTGGGCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000404072.7
ENST00000424694.5
ENST00000432756.6
ENST00000435166.1
ENST00000437453.5
ENST00000445628.5
ENST00000484021.5
CDS CCA 72 bp CCCGGGACGCTCGGAACCAAGAACGAGAACAAGTATTaGCGGAAGCTCGCTGAGGCTCGGGAAATGCTATCA +
Preference number: 6 (lower is better)
Translates to: PGTLGTKNENKY*RKLAEAREMLS
Trigger: TGATAGCATTTCCCGAGCCTCAGCGAGCTTCCGCCAATACTTGTTCTCGTTCTTGGTTCCGAGCGTCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS CCA 72 bp ACTGATCCACCGCTGAGAAGCAAGGGTCTGTGGGACTaGGAAGTCCAGGGAAATGAGGAACTTGGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: TDPPLRSKGLWD*EVQGNEELGAP
Trigger: AGGAGCCCCAAGTTCCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CAA 90 bp GCTGAGGCTCGGGAAATGCTATCAGTGCTCCCCAGAGTCCGAATCTaGTCTCCTCGCCAGCCTCTGCTGCCACTGCTATTGTGTAAAGTG +
Preference number: 6 (lower is better)
Translates to: AEAREMLSVLPRVRI*SPRQPLLPLLLCKV
Trigger: CACTTTACACAATAGCAGTGGCAGCAGAGGCTGGCGAGGAGACAAGATTCGGACTCTGGGGAGCACTGATAGCATTTCCCGAGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS TCA 72 bp GGAGAGCAGGGTCCATTGCTGCTTCAGTACAACAACTaGTCCACCGCTGAGAAGCAAGGGTCTGTGGGACTG +
Preference number: 6 (lower is better)
Translates to: GEQGPLLLQYNN*STAEKQGSVGL
Trigger: CAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGACCCTGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 72 bp TGGTTTTCAGAAGCCGAATGCCGAACTTCTCGATGCTaGGGTGGGCATCGGCGAACTTCACAAAAGCCTCGC +
Preference number: 6 (lower is better)
Translates to: WFSEAECRTSRC*GGHRRTSQKPR
Trigger: GCGAGGCTTTTGTGAAGTTCGCCGATGCCCACCGCAGCATCGAGAAGTTCGGCATTCGGCTTCTGAAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000484021.5
CDS CCA 72 bp AAGTCTGCAAACATGGTTCCGAGAGTTGGAGTGGGCTaGCTAACTGCCCAGCTCGGTAGGGGAATGGGGAAT +
Preference number: 6 (lower is better)
Translates to: KSANMVPRVGVG*LTAQLGRGMGN
Trigger: ATTCCCCATTCCCCTACCGAGCTGGGCAGTTAGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356976.8
ENST00000426258.5
ENST00000466374.1
ENST00000469819.5
ENST00000476157.5
CDS CAA 90 bp ATCTTCGCCACCTCCACCTTAGTTTTCCCTTTGATTGACCTGCCATaGACACCGGTGATCTCATCGCCAGCTGCCACTGTGCCGTCCAAG +
Preference number: 6 (lower is better)
Translates to: IFATSTLVFPLIDLP*TPVISSPAATVPSK
Trigger: CTTGGACGGCACAGTGGCAGCTGGCGATGAGATCACCGGTGTCAATGGCAGGTCAATCAAAGGGAAAACTAAGGTGGAGGTGGCGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000426258.5
ENST00000432756.6
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS TCA 72 bp AAGCAAGGGTCTGTGGGACTGGGAAGTCCAGGGAAATaGGGAACTTGGGGCTCCTATACTGCTGGAACTTGG +
Preference number: 6 (lower is better)
Translates to: KQGSVGLGSPGK*GTWGSYTAGTW
Trigger: CCAAGTTCCAGCAGTATAGGAGCCCCAAGTTCCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS TCA 72 bp TCCATTGCTGCTTCAGTACAACAACTGATCCACCGCTaGGAAGCAAGGGTCTGTGGGACTGGGAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SIAASVQQLIHR*EARVCGTGKSR
Trigger: CCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 72 bp GATCTCATCGCCAGCTGCCACTGTGCCGTCCAAGGCTaGTGGGGTGTTGTCAAATACAGTTTATCCTCTTCG +
Preference number: 6 (lower is better)
Translates to: DLIASCHCAVQG*WGVVKYSLSSS
Trigger: CGAAGAGGATAAACTGTATTTGACAACACCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCGATGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS GCA 72 bp ACAAGTATTGGCGGAAGCTCGCTGAGGCTCGGGAAATaGTATCAGTGCTCCCCAGAGTCCGAATCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: TSIGGSSLRLGK*YQCSPESESCL
Trigger: GAGACAAGATTCGGACTCTGGGGAGCACTGATAGCATTTCCCGAGCCTCAGCGAGCTTCCGCCAATACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445628.5
CDS CCA 72 bp CTCATCGCCAGCTGCCACTGTGCCGTCCAAGGCTGCTaGGGTGTTGTCAAATACAGTTTATCCTCTTCGATG +
Preference number: 6 (lower is better)
Translates to: LIASCHCAVQGC*GVVKYSLSSSM
Trigger: CATCGAAGAGGATAAACTGTATTTGACAACACCCCAGCAGCCTTGGACGGCACAGTGGCAGCTGGCGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS CCA 72 bp ACAACAACTGATCCACCGCTGAGAAGCAAGGGTCTGTaGGACTGGGAAGTCCAGGGAAATGAGGAACTTGGG +
Preference number: 6 (lower is better)
Translates to: TTTDPPLRSKGL*DWEVQGNEELG
Trigger: CCCAAGTTCCTCATTTCCCTGGACTTCCCAGTCCCACAGACCCTTGCTTCTCAGCGGTGGATCAGTTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CAA 72 bp TTCTTGATGGTGAGGCGAGTGTCCGGGATGGCTTTGTaGAGGTACGTGTTCAGATCCGTCAGCATCGGCTTG +
Preference number: 6 (lower is better)
Translates to: FLMVRRVSGMAL*RYVFRSVSIGL
Trigger: CAAGCCGATGCTGACGGATCTGAACACGTACCTCAACAAAGCCATCCCGGACACTCGCCTCACCATCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CAA 72 bp TACTTCTTGATGGTGAGGCGAGTGTCCGGGATGGCTTaGTTGAGGTACGTGTTCAGATCCGTCAGCATCGGC +
Preference number: 6 (lower is better)
Translates to: YFLMVRRVSGMA*LRYVFRSVSIG
Trigger: GCCGATGCTGACGGATCTGAACACGTACCTCAACAAAGCCATCCCGGACACTCGCCTCACCATCAAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CAA 90 bp ACGTCCAGGTACTTCTTGATGGTGAGGCGAGTGTCCGGGATGGCTTaGTTGAGGTACGTGTTCAGATCCGTCAGCATCGGCTTGATGGTT +
Preference number: 6 (lower is better)
Translates to: TSRYFLMVRRVSGMA*LRYVFRSVSIGLMV
Trigger: AACCATCAAGCCGATGCTGACGGATCTGAACACGTACCTCAACAAAGCCATCCCGGACACTCGCCTCACCATCAAGAAGTACCTGGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CCA 72 bp CCCGGGACGCTCGGAACCAAGAACGAGAACAAGTATTaGCGGAAGCTCGCTGTTAGTAGGAACAAGCGAAAA +
Preference number: 6 (lower is better)
Translates to: PGTLGTKNENKY*RKLAVSRNKRK
Trigger: TTTTCGCTTGTTCCTACTAACAGCGAGCTTCCGCCAATACTTGTTCTCGTTCTTGGTTCCGAGCGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404072.7
ENST00000424694.5
CDS CAA 72 bp ACCTCCACCTTAGTTTTCCCTTTGATTGACCTGCCATaGACACCGGTGATCTCATCGCCAGCTGCCACTGTG +
Preference number: 6 (lower is better)
Translates to: TSTLVFPLIDLP*TPVISSPAATV
Trigger: CACAGTGGCAGCTGGCGATGAGATCACCGGTGTCAATGGCAGGTCAATCAAAGGGAAAACTAAGGTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000426258.5
ENST00000432756.6
ENST00000435166.1
ENST00000437453.5
ENST00000466374.1
ENST00000468288.5
ENST00000469819.5
ENST00000484021.5
CDS CAA 90 bp TCCAGGTACTTCTTGATGGTGAGGCGAGTGTCCGGGATGGCTTTGTaGAGGTACGTGTTCAGATCCGTCAGCATCGGCTTGATGGTTTTC +
Preference number: 6 (lower is better)
Translates to: SRYFLMVRRVSGMAL*RYVFRSVSIGLMVF
Trigger: GAAAACCATCAAGCCGATGCTGACGGATCTGAACACGTACCTCAACAAAGCCATCCCGGACACTCGCCTCACCATCAAGAAGTACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CAA 90 bp TTCAGGCAGTACGACAGGTACTCAAACTTCACGTCCAGGTACTTCTaGATGGTGAGGCGAGTGTCCGGGATGGCTTTGTTGAGGTACGTG +
Preference number: 6 (lower is better)
Translates to: FRQYDRYSNFTSRYF*MVRRVSGMALLRYV
Trigger: CACGTACCTCAACAAAGCCATCCCGGACACTCGCCTCACCATCAAGAAGTACCTGGACGTGAAGTTTGAGTACCTGTCGTACTGCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS GCA 72 bp TCTGCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTaGTTGACTTTCTTCAACACTTCACCTCCTGAATCA +
Preference number: 6 (lower is better)
Translates to: SAVPELMFSTSR*LTFFNTSPPES
Trigger: TGATTCAGGAGGTGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS GCA 72 bp CTACAAATAGTGAGCTCCTGGGAGAGCAGGGTCCATTaGTGCTTCAGTACAACAACTGATCCACCGCTGAGA +
Preference number: 6 (lower is better)
Translates to: LQIVSSWESRVH*CFSTTTDPPLR
Trigger: TCTCAGCGGTGGATCAGTTGTTGTACTGAAGCAGCAATGGACCCTGCTCTCCCAGGAGCTCACTATTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CCA 72 bp TTAACTGTCCACAGCCCCCTACAAATAGTGAGCTCCTaGGAGAGCAGGGTCCATTGCTGCTTCAGTACAACA +
Preference number: 6 (lower is better)
Translates to: LTVHSPLQIVSS*ESRVHCCFSTT
Trigger: TGTTGTACTGAAGCAGCAATGGACCCTGCTCTCCCAGGAGCTCACTATTTGTAGGGGGCTGTGGACAGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CAA 72 bp TACGACAGGTACTCAAACTTCACGTCCAGGTACTTCTaGATGGTGAGGCGAGTGTCCGGGATGGCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: YDRYSNFTSRYF*MVRRVSGMALL
Trigger: CAACAAAGCCATCCCGGACACTCGCCTCACCATCAAGAAGTACCTGGACGTGAAGTTTGAGTACCTGTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000484021.5
CDS CAA 72 bp GCGGTCCCTGAACTCATGTTCTCCACCAGCCGGTGCTaGACTTTCTTCAACACTTCACCTCCTGAATCATCT +
Preference number: 6 (lower is better)
Translates to: AVPELMFSTSRC*TFFNTSPPESS
Trigger: AGATGATTCAGGAGGTGAAGTGTTGAAGAAAGTCAAGCACCGGCTGGTGGAGAACATGAGTTCAGGGACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426258.5
CDS CAA 90 bp CTTGACCATCCCAGCAGAAGCACTGCTCCATCTGCTTTGCTCTTCTaGTCACCAAGTCATGCTAATAGTGCCCTTATGGCACTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: LDHPSRSTAPSALLF*SPSHANSALMALSC
Trigger: ACAGCTCAGTGCCATAAGGGCACTATTAGCATGACTTGGTGACAAGAAGAGCAAAGCAGATGGAGCAGTGCTTCTGCTGGGATGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CAA 72 bp CCCAGCAGAAGCACTGCTCCATCTGCTTTGCTCTTCTaGTCACCAAGTCATGCTAATAGTGCCCTTATGGCA +
Preference number: 6 (lower is better)
Translates to: PSRSTAPSALLF*SPSHANSALMA
Trigger: TGCCATAAGGGCACTATTAGCATGACTTGGTGACAAGAAGAGCAAAGCAGATGGAGCAGTGCTTCTGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CAA 72 bp CTTGACCATCCCAGCAGAAGCACTGCTCCATCTGCTTaGCTCTTCTTGTCACCAAGTCATGCTAATAGTGCC +
Preference number: 6 (lower is better)
Translates to: LDHPSRSTAPSA*LFLSPSHANSA
Trigger: GGCACTATTAGCATGACTTGGTGACAAGAAGAGCAAAGCAGATGGAGCAGTGCTTCTGCTGGGATGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS CAA 90 bp GAAGCTTTCCTTGACCATCCCAGCAGAAGCACTGCTCCATCTGCTTaGCTCTTCTTGTCACCAAGTCATGCTAATAGTGCCCTTATGGCA +
Preference number: 6 (lower is better)
Translates to: EAFLDHPSRSTAPSA*LFLSPSHANSALMA
Trigger: TGCCATAAGGGCACTATTAGCATGACTTGGTGACAAGAAGAGCAAAGCAGATGGAGCAGTGCTTCTGCTGGGATGGTCAAGGAAAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 72 bp TCCGAGTTTATCCTCTTCGATGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGTTGGAGTGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SEFILFDVIIQV*KHGSESWSGLA
Trigger: AGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356976.8
ENST00000404072.7
ENST00000424694.5
ENST00000435166.1
ENST00000437453.5
ENST00000445628.5
ENST00000466374.1
ENST00000469819.5
ENST00000484021.5
CDS GCA 72 bp TCACAGTTTATCCTCTTCGATGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGTTGGAGTGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SQFILFDVIIQV*KHGSESWSGLA
Trigger: AGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476157.5
CDS GCA 72 bp ATACAGTTTATCCTCTTCGATGTCATAATCCAAGTCTaGAAACATGGTTCCGAGAGTTGGAGTGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: IQFILFDVIIQV*KHGSESWSGLA
Trigger: AGCCAGCCCACTCCAACTCTCGGAACCATGTTTGCAGACTTGGATTATGACATCGAAGAGGATAAACTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426258.5
ENST00000432756.6
CDS CCA 72 bp AACCAAACCCAAACCTCTGCCACATTCAATGAACACTaGCCACGAAATGGATCCCGACAGCAGAAAAATCAA +
Preference number: 6 (lower is better)
Translates to: NQTQTSATFNEH*PRNGSRQQKNQ
Trigger: TTGATTTTTCTGCTGTCGGGATCCATTTCGTGGCCAGTGTTCATTGAATGTGGCAGAGGTTTGGGTTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484021.5