RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PICALM (Homo sapiens)

Ensembl gene IDs: ENSG00000073921

Ensembl transcript IDs: ENST00000356360.9, ENST00000393346.8, ENST00000525162.5, ENST00000526033.5, ENST00000526907.1, ENST00000526961.5, ENST00000528256.1, ENST00000528398.5, ENST00000528411.1, ENST00000529016.5, ENST00000529760.5, ENST00000530542.1, ENST00000530692.5, ENST00000531558.1, ENST00000531930.5, ENST00000532041.5, ENST00000532317.5, ENST00000532603.5, ENST00000533350.1, ENST00000534375.1, ENST00000534412.5, ENST00000630913.2

Found 659 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCCTGATACAGGGCCAAAGGGGTTTGGAGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGTTGCGTCATTACAGGAACACTTCCC +
Preference number: 1 (lower is better)
Translates to: APDTGPKGFGGLMTG*LYIKVGCVITGTLP
Trigger: GGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR TCA 90 bp GTATCTGTGCTCCTGATACAGGGCCAAAGGGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTAAGGTTGGTTGCGTCATTACAGGAA +
Preference number: 1 (lower is better)
Translates to: VSVLLIQGQRGLEVS*QAGCILRLVASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR TCA 90 bp ACTAACTTGCTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTGAGAAGTCCACCTAGTTCATCAAAG +
Preference number: 1 (lower is better)
Translates to: TNLLGGSLATGRFWF*EATVGLRSPPSSSK
Trigger: CTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CCA 90 bp AACACTTCCCATTTGTGGAGGAATTCCATATCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGCCATTACAGGGGGTGCCATTGTTGC +
Preference number: 1 (lower is better)
Translates to: NTSHLWRNSISYHAC*CSSRIGHYRGCHCC
Trigger: GCAACAATGGCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR TCA 90 bp CCTGCTGAGGTGGATACAGGAGAGGCTGCAGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCT +
Preference number: 1 (lower is better)
Translates to: PAEVDTGEAAVVKEV*GFFASSFRRCSFKA
Trigger: AGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR CCA 90 bp AAAATATGTCAATGGCTGGTGCAGTCATTATCCCTCCTGCTGAGGTaGATACAGGAGAGGCTGCAGTTGTTAAAGAGGTATGAGGTTTCT +
Preference number: 1 (lower is better)
Translates to: KICQWLVQSLSLLLR*IQERLQLLKRYEVS
Trigger: AGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR GCA 90 bp TCCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACTTTGGTCAGAGATAGACCAGTGCTT +
Preference number: 1 (lower is better)
Translates to: SFKAFKRACSSSNAA*FSLSSTLVRDRPVL
Trigger: AAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR TCA 90 bp GCAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATaGACTGTCCTTCTTAAGGCCCCTCTCCACCCAAATGTTAAAGAT +
Preference number: 1 (lower is better)
Translates to: ATRMLKLMYRIAFLQ*TVLLKAPLHPNVKD
Trigger: ATCTTTAACATTTGGGTGGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR TCA 90 bp ACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTAATGGAAGAAGAGAGTTTAAGAGAT +
Preference number: 1 (lower is better)
Translates to: TFSYKLVPISFMGLH*VTCSILMEEESLRD
Trigger: ATCTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp GGGTGCCATTGTTGCAGCATTCCAAGCGGTTGTTGGTGCAACCTTTGGTTGCCAACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 2 (lower is better)
Translates to: GCHCCSIPSGCWCNLWLPTARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CAA 90 bp CAGTCATTATCCCTCCTGCTGAGGTGGATACAGGAGAGGCTGCAGTaGTTAAAGAGGTATGAGGTTTCTTTGCAAGTTCTTTTAGGCGCT +
Preference number: 2 (lower is better)
Translates to: QSLSLLLRWIQERLQ*LKRYEVSLQVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp GTTTCTTTGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 2 (lower is better)
Translates to: VSLQVLLGAVPLKLSNVPTARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...AGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAACATTAAGGCCAGCTaGAGGGTGTGGCTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLNIKAS*RVWLCN
Trigger: GTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR GCA 90 bp TACATCATTCTTAGTGGTTCCATTTCCGATGCCAAGATTGCCCACAAGGTTGGCTGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 2 (lower is better)
Translates to: YIILSGSISDAKIAHKVGCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...GCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CAA 90 bp TCTGCAGAGACAATGCAACAAGAATGCTTAAACTCATGTACAGAATaGCTTTCCTACAATGAACTGTCCTTCTTAAGGCCCCTCTCCACC +
Preference number: 2 (lower is better)
Translates to: SAETMQQECLNSCTE*LSYNELSFLRPLST
Trigger: GGTGGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTGCATTGTCTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR GCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCAATGTTCAAGGACTTTaGCCCCCTTCCCTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: QQECLNSCTELLSYNELSNVQGL*PPSLPL
Trigger: AAGGGGGAGGGAAGGGGGGCAAAGTCCTTGAACATT...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CCA 90 bp ACACTTCCCATTTGTGGAGGAATTCCATATCCTATCATGCCTGTTGGTGTAGTAAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 2 (lower is better)
Translates to: TLPICGGIPYPIMPVGVVRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...TACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CAA 90 bp TGGATACAGGAGAGGCTGCAGTTGTTAAAGAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTG +
Preference number: 2 (lower is better)
Translates to: WIQERLQLLKRYEVS*QVLLGAVPLKLSNV
Trigger: CACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCGCTTTTCCTAGTCAGTaGACTGTTCCCTGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAAFPSQ*TVPWQN
Trigger: ATTTTGCCAGGGAACAGTTCACTGACTAGGAAAAGC...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CCA 90 bp CATAGGATGTACAGATGGGTGAAAAGTTGGCTGCTGCAAATCAAGCAGATCATTAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 2 (lower is better)
Translates to: HRMYRWVKSWLLQIKQIIKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...AATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 2 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 2 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 2 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 2 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 2 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCAGGAAAGTCTTGAAGTaGAAGCAATTCCTCACATTC +
Preference number: 2 (lower is better)
Translates to: RYMIITWHEPKKMFKDFARKVLK*KQFLTF
Trigger: GAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCT...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTATTGCTTTCCTACAATaGACTGTCCTTCTTAAGGCC +
Preference number: 2 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLIAFLQ*TVLLKA
Trigger: GGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAAT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp TTTTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 2 (lower is better)
Translates to: FSFLPRKLNVVPKHQEDCNFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...GCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR GCA 90 bp GCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGATTTTCTTTAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 2 (lower is better)
Translates to: ALESVVALLAAVESLIFFNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...AAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 2 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 2 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 2 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACGCTCTGTATGTCAGCTaGGAAAAGCATTCTGAATCA +
Preference number: 2 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNALYVS*EKHSES
Trigger: TGATTCAGAATGCTTTTCTCAGCTGACATACAGAGC...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCAGGAAAGTCTTGAAGTaGAAGCAATTCCTCACATTC +
Preference number: 2 (lower is better)
Translates to: QQECLNSCTELLSYNELSRKVLK*KQFLTF
Trigger: GAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCT...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR TCA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTCTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 2 (lower is better)
Translates to: FEQEHEGSIYYPICKFIALSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
3UTR-3UTR GCA 90 bp TTTTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 2 (lower is better)
Translates to: FSFLPRKLNVVPKHQEDCNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...GCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR CCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 2 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 2 (lower is better)
Translates to: GFINCIDTFSYKLVPISFSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGGCCCTAATGTCAAATaGAAAATAATGACATGCCAA +
Preference number: 2 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLGPNVK*KIMTCQ
Trigger: TTGGCATGTCATTATTTTCCATTTGACATTAGGGCC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR CAA 90 bp TTAATAATTCCTTCATTGTATGCTGCAAACAGTCTAATGGCATCTTaGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGT +
Preference number: 2 (lower is better)
Translates to: LIIPSLYAANSLMAS*NRSMKAAFITPFVS
Trigger: ACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR TCA 90 bp AGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTAACACTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 2 (lower is better)
Translates to: RSMKAAFITPFVSSLLLTLSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...TGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
3UTR-3UTR CCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCTATATGATCATAACATaGCACGAGCCAAAGAAAATG +
Preference number: 2 (lower is better)
Translates to: QQECLNSCTELLSYNELSYMIIT*HEPKKM
Trigger: CATTTTCTTTGGCTCGTGCCATGTTATGATCATATA...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTATATGATCATAACATaGCACGAGCCAAAGAAAATG +
Preference number: 2 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNYMIIT*HEPKKM
Trigger: CATTTTCTTTGGCTCGTGCCATGTTATGATCATATA...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR TCA 72 bp CTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTGAGAAGTCCACCTAGT +
Preference number: 3 (lower is better)
Translates to: LGGSLATGRFWF*EATVGLRSPPS
Trigger: ACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR TCA 72 bp CTCCTGATACAGGGCCAAAGGGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTAAGGTTGGTTGCGTCA +
Preference number: 3 (lower is better)
Translates to: LLIQGQRGLEVS*QAGCILRLVAS
Trigger: TGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR TCA 72 bp CAGGAAGGTTCTGGTTCTGAGAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCATCAAAGCCCCCAGAAT +
Preference number: 3 (lower is better)
Translates to: QEGSGSERPLLV*EVHLVHQSPQN
Trigger: ATTCTGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CCA 72 bp ACAGGGCCAAAGGGGTTTGGAGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGTTGCGTCATTACAGGA +
Preference number: 3 (lower is better)
Translates to: TGPKGFGGLMTG*LYIKVGCVITG
Trigger: TCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR GCA 72 bp GCAGCATTCCAAGCGGTTGTTGGTGCAACCTTTGGTTaGCAGTTAGATCCCCCAGTTAACTTCTTTTCACCT +
Preference number: 3 (lower is better)
Translates to: AAFQAVVGATFG*QLDPPVNFFSP
Trigger: AGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CCA 72 bp CATTTGTGGAGGAATTCCATATCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGCCATTACAGGGGGTGC +
Preference number: 3 (lower is better)
Translates to: HLWRNSISYHAC*CSSRIGHYRGC
Trigger: GCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR CAA 90 bp TTAAGGTTGGTTGCGTCATTACAGGAACACTTCCCATTTGTGGAGGAATTCCATCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 3 (lower is better)
Translates to: LRLVASLQEHFPFVEEFHHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...ATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR TCA 72 bp AGGATCTCCCCATGTACTTGCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGGGTGAAAAGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: RISPCTCYLRSS*HRMYRWVKSWL
Trigger: CAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR CAA 90 bp ACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 3 (lower is better)
Translates to: TLVRDRPVLAREDTALESLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...ACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR CAA 90 bp TTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGCTTCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 3 (lower is better)
Translates to: FRRCSFKAFKRACSSSNASLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...AGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp TTAAGGTTGGTTGCGTCATTACAGGAACACTTCCCATTTGTGGAGGAATTCCATTTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 3 (lower is better)
Translates to: LRLVASLQEHFPFVEEFHFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...ATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR CCA 72 bp TGGTTCCATTTCCGATGCCAAGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGTCATCAGATACTAACT +
Preference number: 3 (lower is better)
Translates to: WFHFRCQDCPQG*LKMNPSHQILT
Trigger: AGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: RYMIITWHEPKKMFKDFALLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 3 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHTAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 3 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 3 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 3 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 3 (lower is better)
Translates to: QQECLNSCTELLSYNELSTAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 3 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGTAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCCCAAAAGAGTCCTGTaGAAATACAGTAAAGGACAC +
Preference number: 3 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSPKRVL*KYSKGH
Trigger: GTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTATCCTAGGCACAGAATaGACTATAAGGATTAATGCA +
Preference number: 3 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLILGTE*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATTCTGTGCCTAGGAT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR TCA 72 bp AAGAAATGGAAAGGTGAACATCACCACTACTTTTTGTaGGGAAAGGATTTAAGCTTGGAATGGCATCATCAA +
Preference number: 3 (lower is better)
Translates to: KKWKGEHHHYFL*GKDLSLEWHHQ
Trigger: TTGATGATGCCATTCCAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTTTCCATTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630913.2
3UTR-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 3 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCTAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR-3UTR CAA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 3 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNTAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 3 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
3UTR-3UTR CAA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 3 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
3UTR GCA 72 bp GTTAAAGATGTATTTACACAAAGCACCGATCAACAGTaGAGTTTAATTCTTCGTTTACTAAACTCTTGGCTA +
Preference number: 3 (lower is better)
Translates to: VKDVFTQSTDQQ*SLILRLLNSWL
Trigger: TAGCCAAGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCTTTAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GGGTGCCATTGTTGCAGCATTCCAAGCGGTTGTTGGTGCAACCTTTGGTTGCCAATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GCHCCSIPSGCWCNLWLPIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp ACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: TLVRDRPVLAREDTALESIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...ACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CCACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAACTGGCCGGACATCTCTaGAGCTCCTCCACCACCCCA +
Preference number: 4 (lower is better)
Translates to: PLWSEIDQCLPGKTLHWKLAGHL*SSSTTP
Trigger: TGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAG...TTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGCAGCCGGCGGGGACTaGGACCCCCAAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHAAGGD*DPQEPE
Trigger: CTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCAGCAGCCGGCGGGGACTaGGACCCCCAAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: ASLNRSMKAAFITPFVSSAAGGD*DPQEPE
Trigger: CTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGC...TGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531558.1
ENST00000630913.2
CDS-3UTR CCA 90 bp AACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTGTAGCAGCCGGCGGGGACTaGGACCCCCAAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: NSISPSLHFCEIKCNLSVAAGGD*DPQEPE
Trigger: CTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGC...TACAGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GGGCCTGTGAAAGGTCTGGTATATCACCTCTGTCAATTCCAACTTGCTCTGCAACGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPVKGLVYHLCQFQLALQRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPVLAREDTALESVVALLHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...AAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTAGCAGCCGGCGGGGACTaGGACCCCCAAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLAAGGD*DPQEPE
Trigger: CTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGC...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTCGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRHCIGKCSCPACSCRIFRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...AAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTGCTAGGGGCCTGTGAAAGGTCTGGTATATCACCTCTGTCAATTCCAACTTGCCGTGGGTCGTGGCCTTaGATACTGTCTTGGATACGG +
Preference number: 4 (lower is better)
Translates to: LLGACERSGISPLSIPTCRGSWP*ILSWIR
Trigger: CCGTATCCAAGACAGTATGCAAGGCCACGACCCACG...GCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTAGGGGCCTCCCTCCTGCTGAGGTaGATACAGGAGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSKEAKCCSKASRRLLGASLLLR*IQERLQ
Trigger: CTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGA...GGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGCAGCCGGCGGGGACTaGGACCCCCAAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGAAGGD*DPQEPE
Trigger: CTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp ATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: MASLNRSMKAAFITPFVSIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...ACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CATAACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HNSISPSLHFCEIKCNLSIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...AGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: SACQGRHCIGKCSCPACSGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...GCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTTCGGGGCCGCGCGCTaGCACCAGTCCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAFGAAR*HQSREN
Trigger: GTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGCAGCCGGCGGGGACTaGGACCCCCAAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLAAGGD*DPQEPE
Trigger: CTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: SACQGRHCIGKCSCPACSSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...GCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTGTGCTGGGCGGCAGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFACAGRQ*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACTGCCGCCCAGCACA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GGGCCTGTGAAAGGTCTGGTATATCACCTCTGTCAATTCCAACTTGCTCTGCAAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GPVKGLVYHLCQFQLALQGRFWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCC...TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTTCGGGGCCGCGCGCTaGCACCAGTCCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLFGAAR*HQSREN
Trigger: GTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTTTCGGGGCCGCGCGCTaGCACCAGTCCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: FEQEHEGSIYYPICKFIAFGAAR*HQSREN
Trigger: GTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAA...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531558.1
CDS-3UTR GCA 90 bp CATAACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTCTGGCCGGACATCTCTaGAGCTCCTCCACCACCCCA +
Preference number: 4 (lower is better)
Translates to: HNSISPSLHFCEIKCNLSLAGHL*SSSTTP
Trigger: TGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAG...AGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCCTGGCCGGACATCTCTaGAGCTCCTCCACCACCCCA +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFALAGHL*SSSTTP
Trigger: TGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAG...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGCCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: NGIFEQEHEGSIYYPICKPVTLC*AAVIRS
Trigger: GGACCGAATCACTGCCGCCCAGCACAGTGTCACCGG...CTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTGTACCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: NSISPSLHFCEIKCNLSVPVTLC*AAVIRS
Trigger: GGACCGAATCACTGCCGCCCAGCACAGTGTCACCGG...TACAGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHPVTLC*AAVIRS
Trigger: GGACCGAATCACTGCCGCCCAGCACAGTGTCACCGG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTGTACGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSISPSLHFCEIKCNLSVRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...TACAGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTGTGCTGGGCGGCAGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSICAGRQ*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACTGCCGCCCAGCACA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTTGTGCTGGGCGGCAGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FEQEHEGSIYYPICKFIACAGRQ*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACTGCCGCCCAGCACA...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCATCATTGGGCAGCTTTaGTGTGCTGTTAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SACQGRHCIGKCSCPACSIIGQL*CAVRRT
Trigger: AGTTCTTCTAACAGCACATCAAAGCTGCCCAATGAT...GCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp GGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTAACATTAAGGCCAGCTaGAGGGTGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GRHCIGKCSCPACSCRIFNIKAS*RVWLCN
Trigger: GTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTT...AAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp GCCTGCTTTTCCCTTTCATCCACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: ACFSLSSTLVRDRPVLARSSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...CCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTGTCGGGCACTCCCTTaGCCCCGCCTCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWCRALP*PRLSSA
Trigger: GGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTTCGGGGCCGCGCGCTaGCACCAGTCCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWFGAAR*HQSREN
Trigger: GTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTACTGGCCGGACATCTCTaGAGCTCCTCCACCACCCCA +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLLAGHL*SSSTTP
Trigger: TGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAG...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTGTGAGGACTGTGACTaGAGGGGCTGGATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHCEDCD*RGWMLP
Trigger: CGGCAGCATCCAGCCCCTCCAGTCACAGTCCTCACA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS-3UTR TCA 90 bp AGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTAACATGTGCTGGGCGGCAGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RSMKAAFITPFVSSLLLTCAGRQ*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACTGCCGCCCAGCACA...TGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATACGGCAGAGCCGGTaGCACTGTGCTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFIRQSR*HCAGRQ
Trigger: CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTAT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp ATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: MASLNRSMKAAFITPFVSFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...ACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GGGCCTGTGAAAGGTCTGGTATATCACCTCTGTCAATTCCAACTTGCTCTGCAAAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GPVKGLVYHLCQFQLALQRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp TACATCATTCTTAGTGGTTCCATTTCCGATGCCAAGATTGCCCACAAGGTTGGCTCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: YIILSGSISDAKIAHKVGSEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...GCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp GTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTTATGTCAATGGCTGGTaGAGTCATTATCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VRDRPVLAREDTALESVVYVNGW*SHYPSC
Trigger: GCAGGAGGGATAATGACTGCACCAGCCATTGACATA...AACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp GGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTCCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GRHCIGKCSCPACSCRIFPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...AAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTGTCGGGCACTCCCTTaGCCCCGCCTCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLCRALP*PRLSSA
Trigger: GGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTTGTCGGGCACTCCCTTaGCCCCGCCTCAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSCRALP*PRLSSA
Trigger: GGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACA...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGPVTLC*AAVIRS
Trigger: GGACCGAATCACTGCCGCCCAGCACAGTGTCACCGG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTCCCTTTCATCCACTTTaGTCAGAGATAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: VRDRPVLAREDTALESVVPFHPL*SEIDQC
Trigger: GCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGG...AACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATCCCTCCTGCTGAGGTaGATACAGGAGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASLNRSMKAAFITPFVSSSLLLR*IQERLQ
Trigger: CTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGA...TGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTCGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IFEQEHEGSIYYPICKFIRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...AATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTGTGCTGGGCGGCAGTaGTTCGGTCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLCAGRQ*FGPSGS
Trigger: AGAGCCTGACGGACCGAATCACTGCCGCCCAGCACA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTTTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FEQEHEGSIYYPICKFIAFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TCTGCAACTTTGAGGAACTCTGAGATTCTTGTCATCCTAGTTAGGAACTTCTTATTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SATLRNSEILVILVRNFLFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...TAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GTTTCTTTGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VSLQVLLGAVPLKLSNVPHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...AGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GGGCCTGTGAAAGGTCTGGTATATCACCTCTGTCAATTCCAACTTGCTCTGCAATACCTGAGAAGCAGTTaGCATAGGATGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: GPVKGLVYHLCQFQLALQYLRSS*HRMYRW
Trigger: CCATCTGTACATCCTATGTCAACTGCTTCTCAGGTA...TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp CCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTAGGGGCCTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: PSKEAKCCSKASRRLLGASSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...GGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGCTGGCCGGACATCTCTaGAGCTCCTCCACCACCCCA +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRLAGHL*SSSTTP
Trigger: TGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAG...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACCTGGCCGGACATCTCTaGAGCTCCTCCACCACCCCA +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNLAGHL*SSSTTP
Trigger: TGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAG...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTPVTLC*AAVIRS
Trigger: GGACCGAATCACTGCCGCCCAGCACAGTGTCACCGG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTCCCTCCTGCTGAGGTaGATACAGGAGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSISLLLR*IQERLQ
Trigger: CTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGTACTCTGAACCCTATGCACTACTAAATAGGCAATATGATACAATCAAAGGTCGGTCCGTCAGGCTCTaGCCGGACATCTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MYSEPYALLNRQYDTIKGRSVRL*PDISAA
Trigger: AGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCG...ACCTTTGATTGTATCATATTGCCTATTTAGTAGTGCATAGGGTTCAGAGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFATARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACAAAGGGGTCCTTTCCTaGAGCTCTGTGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHKGVLS*SSVRTV
Trigger: CACAGTCCTCACAGAGCTTCAGGAAAGGACCCCTTT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCGTGGGTCGTGGCCTTaGATACTGTCTTGGATACGG +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRGSWP*ILSWIR
Trigger: CCGTATCCAAGACAGTATGCAAGGCCACGACCCACG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCGTGGGTCGTGGCCTTaGATACTGTCTTGGATACGG +
Preference number: 4 (lower is better)
Translates to: SLNRSMKAAFITPFVSSLRGSWP*ILSWIR
Trigger: CCGTATCCAAGACAGTATGCAAGGCCACGACCCACG...CAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTAATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGGGGGTGCCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LMASLNRSMKAAFITPFVRGCHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGGCACCCCCT...TACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTCCCTCCTGCTGAGGTaGATACAGGAGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWSLLLR*IQERLQ
Trigger: CTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: TLVRDRPVLAREDTALESKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...ACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTGTGACTGGAGGGGCTaGATGCTGCCGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLCDWRG*MLPTAV
Trigger: CACAGCTGTCGGCAGCATCCAGCCCCTCCAGTCACA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTTTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTTTTTCTTGGGCCCCATaGTCTCGTGGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSFSWAP*SRGSWP
Trigger: AGGCCACGACCCACGAGATCATGGGGCCCAAGAAAA...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 4 (lower is better)
Translates to: FEQEHEGSIYYPICKFIATARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTAAGGTTGGTTGCGTCATTACAGGAACACTTCCCATTTGTGGAGGAATTCCATGGATGTACAGATGGGTaGAAAGTTGGCTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LRLVASLQEHFPFVEEFHGCTDG*KVGCCK
Trigger: TTTGCAGCAGCCAACTTTTCACCCATCTGTACATCC...ATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGGCCACTGTTGGTTTaGGAAGTCCACCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRPLLV*EVHPQN
Trigger: ATTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529760.5
ENST00000530692.5
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGGCCACTGTTGGTTTaGGAAGTCCACCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRPLLV*EVHPQN
Trigger: ATTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCGACAGCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCRQLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGCTGTCG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS-3UTR GCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFASEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHSEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGGGGGTGCCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRGCHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGGCACCCCCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGCCCTTTCATCCACTTTaGTCAGAGATAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LLGAVPLKLSNVPVLPLMPFHPL*SEIDQC
Trigger: GCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGG...CATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHVWLCN*RRSESN
Trigger: GTTGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTAATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: LMASLNRSMKAAFITPFVVWLCN*RRSESN
Trigger: GTTGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...TACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp CATAACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: HNSISPSLHFCEIKCNLSCWCNL*LPVRSP
Trigger: GGGGGATCTAACTGGCAACCAAAGGTTGCACCAACA...AGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCTGAGAGGCCACTGTTaGTTTGAGAAGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLRGHC*FEKSTP
Trigger: GGGGGTGGACTTCTCAAACCAACAGTGGCCTCTCAG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACTGAGAGGCCACTGTTaGTTTGAGAAGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGLRGHC*FEKSTP
Trigger: GGGGGTGGACTTCTCAAACCAACAGTGGCCTCTCAG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
3UTR CAA 72 bp TTGGCTAAAGATGAATCCAAGTCATCAGATACTAACTaGCTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LAKDESKSSDTN*LGGSLATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGTARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTCATTATCCCTCCTGCTaGGGTGGATACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAHYPSC*GGYRRG
Trigger: GCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATG...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAACATTAAGGCCAGCTaGAGGGTGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGNIKAS*RVWLCN
Trigger: GTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAACATTAAGGCCAGCTaGAGGGTGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWNIKAS*RVWLCN
Trigger: GTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWGRFWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCC...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QQECLNSCTELLSYNELSGRFWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCC...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGGRFWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGCCACTGTTGGTTTaGGAAGTCCACCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWRPLLV*EVHPQN
Trigger: ATTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCAACTGGAGAAGGAGTaGATCCTCCCCATGTACTTG +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLQLEKE*ILPMYL
Trigger: CAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTG...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR GCA 90 bp ATGTACTCTGAACCCTATGCACTACTAAATAGGCAATATGATACAATCAAAGGTCGTGGGTCGTGGCCTTaGATACTGTCTTGGATACGG +
Preference number: 4 (lower is better)
Translates to: MYSEPYALLNRQYDTIKGRGSWP*ILSWIR
Trigger: CCGTATCCAAGACAGTATGCAAGGCCACGACCCACG...ACCTTTGATTGTATCATATTGCCTATTTAGTAGTGCATAGGGTTCAGAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR GCA 90 bp GAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTAACATTCGTGGGTCGTGGCCTTaGATACTGTCTTGGATACGG +
Preference number: 4 (lower is better)
Translates to: EHEGSIYYPICKFIAINIRGSWP*ILSWIR
Trigger: CCGTATCCAAGACAGTATGCAAGGCCACGACCCACG...AATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSISEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLSEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp CCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTGTATGAATGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: PSAPLFTFVKSNATCLYEWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...TTCATACAGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGGTGCAACCTTTGGTTaGCAGTTAGATCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLGATFG*QLDPPV
Trigger: AACTGGGGGATCTAACTGGCAACCAAAGGTTGCACC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAATGTTCAAGGACTTTaGCCCCCTTCCCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGNVQGL*PPSLPL
Trigger: AAGGGGGAGGGAAGGGGGGCAAAGTCCTTGAACATT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCCCTTTCATCCACTTTaGTCAGAGATAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHPFHPL*SEIDQC
Trigger: GCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIVWLCN*RRSESN
Trigger: GTTGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSICWCNL*LPVRSP
Trigger: GGGGGATCTAACTGGCAACCAAAGGTTGCACCAACA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACATTCCAAGCGGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHIPSGC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAAT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ACACTTCCCATTTGTGGAGGAATTCCATATCCTATCATGCCTGTTGGTGTAGTAGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: TLPICGGIPYPIMPVGVVGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...TACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCTGAGAGGCCACTGTTaGTTTGAGAAGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLRGHC*FEKSTP
Trigger: GGGGGTGGACTTCTCAAACCAACAGTGGCCTCTCAG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529760.5
ENST00000530692.5
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGVWLCN*RRSESS
Trigger: GGAGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRTARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCACTGCTAGGGGCCTGTaGAAGGTCTGGTATATCACC +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCTARGL*KVWYIT
Trigger: GGTGATATACCAGACCTTTCACAGGCCCCTAGCAGT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGGATGTACAGATGGGTaGAAAGTTGGCTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLGCTDG*KVGCCK
Trigger: TTTGCAGCAGCCAACTTTTCACCCATCTGTACATCC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAACATTAAGGCCAGCTaGAGGGTGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTNIKAS*RVWLCN
Trigger: GTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAACATTAAGGCCAGCTaGAGGGTGTGGCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFNIKAS*RVWLCN
Trigger: GTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCGRFWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTGRFWF*EATVGL
Trigger: CAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCC...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTACTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACCTGTATCTGTGCTCCTaGTACAGGGCCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNLYLCS*YRAKGV
Trigger: AACCCCTTTGGCCCTGTATCAGGAGCACAGATACAG...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: GRHCIGKCSCPACSCRIFNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...AAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGTGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLGAVPLKLSNVPVLPLMCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...CATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp GCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGATTTTCTTTATTGGAAAGTGTAGTTaGCCTGCTTGCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ALESVVALLAAVESLIFFIGKCS*PACSCR
Trigger: TCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT...AAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHSSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTATGTCAATGGCTGGTaGAGTCATTATCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIYVNGW*SHYPSC
Trigger: GCAGGAGGGATAATGACTGCACCAGCCATTGACATA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTATGTCAATGGCTGGTaGAGTCATTATCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLYVNGW*SHYPSC
Trigger: GCAGGAGGGATAATGACTGCACCAGCCATTGACATA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGTGCAACCTTTGGTTaGCAGTTAGATCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGGATFG*QLDPPV
Trigger: AACTGGGGGATCTAACTGGCAACCAAAGGTTGCACC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTTGTGGAGGCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILWRHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGCCTCCACAA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532603.5
CDS-3UTR GCA 90 bp GGGCCTGTGAAAGGTCTGGTATATCACCTCTGTCAATTCCAACTTGCTCTGCAATATATTAAGGTTGGTTaGGTCATTACAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: GPVKGLVYHLCQFQLALQYIKVG*VITGTL
Trigger: AAGTGTTCCTGTAATGACGCAACCAACCTTAATATA...TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAGGGGGTGCCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFRGCHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGGCACCCCCT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000630913.2
CDS-3UTR GCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTAATGTTCAAGGACTTTaGCCCCCTTCCCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLNVQGL*PPSLPL
Trigger: AAGGGGGAGGGAAGGGGGGCAAAGTCCTTGAACATT...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAATGTTCAAGGACTTTaGCCCCCTTCCCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFNVQGL*PPSLPL
Trigger: AAGGGGGAGGGAAGGGGGGCAAAGTCCTTGAACATT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGCWCNL*LPVRSP
Trigger: GGGGGATCTAACTGGCAACCAAAGGTTGCACCAACA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTAATTCCAAGCGGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLIPSGC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAAT...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFVWLCN*RRSESS
Trigger: GGAGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLVWLCN*RRSESS
Trigger: GGAGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532317.5
3UTR CAA 72 bp GAGACAGCAGTTTGGATTTTGCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCC +
Preference number: 4 (lower is better)
Translates to: ETAVWILLEVRI*LLEHLSFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
3UTR CAA 72 bp GAGAGGCTGCAGTTGTTAAAGAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: ERLQLLKRYEVS*QVLLGAVPLKL
Trigger: AAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGATTTTCTTTCCTTCCAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 4 (lower is better)
Translates to: ESVVALLAAVESLIFFPSNFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...GGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CATAGGATGTACAGATGGGTGAAAAGTTGGCTGCTGCAAATCAAGCAGATCATTAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 4 (lower is better)
Translates to: HRMYRWVKSWLLQIKQIINFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...AATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGCTCTGTATGTCAGCTaGGAAAAGCATTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHALYVS*EKHSES
Trigger: TGATTCAGAATGCTTTTCTCAGCTGACATACAGAGC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCAACTGGAGAAGGAGTaGATCCTCCCCATGTACTTG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFQLEKE*ILPMYL
Trigger: CAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCAACTGGAGAAGGAGTaGATCCTCCCCATGTACTTG +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCQLEKE*ILPMYL
Trigger: CAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTAATTGGAAAGTGTAGTTaGCCTGCTTGCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLIGKCS*PACSCR
Trigger: TCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFSEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTCAGAGATAGACCAGTaGTTGCCAGGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSASEIDQ*LPGKTL
Trigger: CAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLSSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSISSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGGTGCAACCTTTGGTTaGCAGTTAGATCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCGATFG*QLDPPV
Trigger: AACTGGGGGATCTAACTGGCAACCAAAGGTTGCACC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGGTGCAACCTTTGGTTaGCAGTTAGATCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTGATFG*QLDPPV
Trigger: AACTGGGGGATCTAACTGGCAACCAAAGGTTGCACC...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGCCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACACCAAGCGGTTGTTGGTaGAACCTTTGGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTPSGCW*NLWLPV
Trigger: AACTGGCAACCAAAGGTTGCACCAACAACCGCTTGG...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCATGCCATTCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIHAIHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGAATGGCATG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACCCTTTCATCCACTTTaGTCAGAGATAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGPFHPL*SEIDQC
Trigger: GCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLNRSMKAAFITPFVSSLRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...CAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCATAGGATGTACAGATaGGTGAAAAGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLHRMYR*VKSWLL
Trigger: CAGCAGCCAACTTTTCACCCATCTGTACATCCTATG...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTACATAGGATGTACAGATaGGTGAAAAGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLHRMYR*VKSWLL
Trigger: CAGCAGCCAACTTTTCACCCATCTGTACATCCTATG...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTGTGTGGCTGTGCAACTaGAGAAGGAGTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAVWLCN*RRSESN
Trigger: GTTGGATTCACTCCTTCTCCAGTTGCACAGCCACAC...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR CCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTCWCNL*LPVRSP
Trigger: GGGGGATCTAACTGGCAACCAAAGGTTGCACCAACA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSACWCNL*LPVRSP
Trigger: GGGGGATCTAACTGGCAACCAAAGGTTGCACCAACA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTGTTGGTGCAACCTTTaGTTGCCAGTTAGATCCCCC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFCWCNL*LPVRSP
Trigger: GGGGGATCTAACTGGCAACCAAAGGTTGCACCAACA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAATTCCAAGCGGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGIPSGC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAAT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFASQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: MASLNRSMKAAFITPFVSSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...ACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGGGGGTGCGTATTGTaGAAAATGCATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRGCVL*KMHAIH
Trigger: ATGAATGGCATGCATTTTCCACAATACGCACCCCCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR TCA 90 bp CATAGGATGTACAGATGGGTGAAAAGTTGGCTGCTGCAAATCAAGCAGATCATTCTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 4 (lower is better)
Translates to: HRMYRWVKSWLLQIKQIILSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...AATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFANFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTATCATTGGGCAGCTTTaGTGTGCTGTTAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLIIGQL*CAVRRT
Trigger: AGTTCTTCTAACAGCACATCAAAGCTGCCCAATGAT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGGGATGTACAGATGGGTaGAAAGTTGGCTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRGCTDG*KVGCCK
Trigger: TTTGCAGCAGCCAACTTTTCACCCATCTGTACATCC...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGGATGTACAGATGGGTaGAAAGTTGGCTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCGCTDG*KVGCCK
Trigger: TTTGCAGCAGCCAACTTTTCACCCATCTGTACATCC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCGGATGTACAGATGGGTaGAAAGTTGGCTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFGCTDG*KVGCCK
Trigger: TTTGCAGCAGCCAACTTTTCACCCATCTGTACATCC...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATACCTGAGAAGCAGTTaGCATAGGATGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGYLRSS*HRMYRW
Trigger: CCATCTGTACATCCTATGTCAACTGCTTCTCAGGTA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: QQECLNSCTELLSYNELSYLRSS*HRMYRW
Trigger: CCATCTGTACATCCTATGTCAACTGCTTCTCAGGTA...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp AACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTGTACACCACTACTTTTTGTaGGGAAAGGATTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: NSISPSLHFCEIKCNLSVHHYFL*GKDLSL
Trigger: CAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTG...TACAGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLRPLLV*EVHLVH
Trigger: ATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCT...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCGLEVS*QAGCIL
Trigger: TAATATACAGCCAGCCTGTCATGAGACCTCCAAACC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 4 (lower is better)
Translates to: EQEHEGSIYYPICKFIAIFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...AATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGGCTTTTCCTAGTCAGTaGACTGTTCCCTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWAFPSQ*TVPWQN
Trigger: ATTTTGCCAGGGAACAGTTCACTGACTAGGAAAAGC...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTTATGTCAATGGCTGGTaGAGTCATTATCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTYVNGW*SHYPSC
Trigger: GCAGGAGGGATAATGACTGCACCAGCCATTGACATA...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTATGTCAATGGCTGGTaGAGTCATTATCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAYVNGW*SHYPSC
Trigger: GCAGGAGGGATAATGACTGCACCAGCCATTGACATA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTATGTCAATGGCTGGTaGAGTCATTATCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCYVNGW*SHYPSC
Trigger: GCAGGAGGGATAATGACTGCACCAGCCATTGACATA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTGGTTCCATTTCCGATaGCAAGATTGCCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFWFHFR*QDCPQG
Trigger: ACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACATGCCATTCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGHAIHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGAATGGCATG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGCCCTTTCATCCACTTTaGTCAGAGATAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRPFHPL*SEIDQC
Trigger: GCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGG...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCCCTTTCATCCACTTTaGTCAGAGATAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFPFHPL*SEIDQC
Trigger: GCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCCATAGGATGTACAGATaGGTGAAAAGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QQECLNSCTELLSYNELSHRMYR*VKSWLL
Trigger: CAGCAGCCAACTTTTCACCCATCTGTACATCCTATG...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TTTTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: FSFLPRKLNVVPKHQEDCDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...GCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGTACTCTGAACCCTATGCACTACTAAATAGGCAATATGATACAATCAAAGGTATTCCAAGCGGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MYSEPYALLNRQYDTIKGIPSGC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAAT...ACCTTTGATTGTATCATATTGCCTATTTAGTAGTGCATAGGGTTCAGAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR CCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATTCCAAGCGGTTGTTaGTGCAACCTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTIPSGC*CNLWLP
Trigger: TGGCAACCAAAGGTTGCACCAACAACCGCTTGGAAT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLSYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSASYHAC*CSSRIG
Trigger: GCCTATCCTGCTACTACACCAACAGGCATGATAGGA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSISQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHLSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHVVKEV*GFFASS
Trigger: AGAACTTGCAAAGAAACCTCATACCTCTTTAACAAC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFYLRSS*HRMYRW
Trigger: CCATCTGTACATCCTATGTCAACTGCTTCTCAGGTA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCYLRSS*HRMYRW
Trigger: CCATCTGTACATCCTATGTCAACTGCTTCTCAGGTA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTACCAACAAACATTTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAAATGTTTGTTGG...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR TCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QQECLNSCTELLSYNELSKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACGCTTTTCCTAGTCAGTaGACTGTTCCCTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNAFPSQ*TVPWQN
Trigger: ATTTTGCCAGGGAACAGTTCACTGACTAGGAAAAGC...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGGAAAGTCTTGAAGTaGAAGCAATTCCTCACATTC +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRKVLK*KQFLTF
Trigger: GAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAATTGCTTTCCTACAATaGACTGTCCTTCTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGIAFLQ*TVLLKA
Trigger: GGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAAT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp AATGGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: NGIFEQEHEGSIYYPICKNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...CTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531558.1
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGATTTTCTTTCCAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: IGKCSCPACSCRIFDFLSNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...GGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR GCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCTGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QQECLNSCTELLSYNELSCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATTGGAAAGTGTAGTTaGCCTGCTTGCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFIGKCS*PACSCR
Trigger: TCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTATTGGAAAGTGTAGTTaGCCTGCTTGCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLIGKCS*PACSCR
Trigger: TCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAATTGGAAAGTGTAGTTaGCCTGCTTGCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLIGKCS*PACSCR
Trigger: TCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTSSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFSSNAA*FSLSST
Trigger: AGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGCATGCCATTCATTGTTaGAGCATTCCAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRHAIHC*SIPSGC
Trigger: ACAACCGCTTGGAATGCTGCAACAATGAATGGCATG...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532317.5
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGCGTATTGTGGAAAATaGATGCCATTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIAYCGK*MPFIVA
Trigger: TGCAACAATGAATGGCATGCATTTTCCACAATACGC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAACCCGACACGTTGCTaGCATTCTAAATTTAGATAC +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLNPTRC*HSKFRY
Trigger: GTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR CCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACAGATGGGTGAAAAGTTaGCTGCTGCAAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNRWVKS*LLQIKQ
Trigger: CTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCT...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTCATAGGATGTACAGATaGGTGAAAAGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAHRMYR*VKSWLL
Trigger: CAGCAGCCAACTTTTCACCCATCTGTACATCCTATG...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCATAGGATGTACAGATaGGTGAAAAGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFHRMYR*VKSWLL
Trigger: CAGCAGCCAACTTTTCACCCATCTGTACATCCTATG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGCATAGGATGTACAGATaGGTGAAAAGTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRHRMYR*VKSWLL
Trigger: CAGCAGCCAACTTTTCACCCATCTGTACATCCTATG...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp ATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGATTTTCTTTCCATACATCTGAAGAAATaGAAAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: IGKCSCPACSCRIFDFLSIHLKK*KGEHHH
Trigger: GTGGTGATGTTCACCTTTCCATTTCTTCAGATGTAT...GGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAACACTTCCCATTTGTaGAGGCATTGTTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWNTSHL*RHCCSI
Trigger: AATGCTGCAACAATGCCTCCACAAATGGGAAGTGTT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532603.5
CDS-3UTR CCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGGTCTCATGACAGGCTaGCTGTATATTAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLGLMTG*LYIKVG
Trigger: ACCAACCTTAATATACAGCCAGCCTGTCATGAGACC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AACTCCATCAGCCCCTCTCTTCACTTTTGTGAAATCAAATGCAACTTGTCTGTAAACACTTCCCATTTGTaGAGGAATTCCATATCCTAT +
Preference number: 4 (lower is better)
Translates to: NSISPSLHFCEIKCNLSVNTSHL*RNSISY
Trigger: ATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT...TACAGACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCGGCCCTAATGTCAAATaGAAAATAATGACATGCCAA +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAGPNVK*KIMTCQ
Trigger: TTGGCATGTCATTATTTTCCATTTGACATTAGGGCC...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAAGGGGGTGCGTATTGTaGAAAATGCATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTRGCVL*KMHAIH
Trigger: ATGAATGGCATGCATTTTCCACAATACGCACCCCCT...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAGGGGGTGCGTATTGTaGAAAATGCATGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTRGCVL*KMHAIH
Trigger: ATGAATGGCATGCATTTTCCACAATACGCACCCCCT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532317.5
3UTR CAA 72 bp AGTGAACTGTTCCCTGGCAAAATCCTAGGCACAGAATaGACTATAAGGATTAATGCATTTATAATGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SELFPGKILGTE*TIRINAFIMLP
Trigger: GGGAAGCATTATAAATGCATTAATCCTTATAGTCAATTCTGTGCCTAGGATTTTGCCAGGGAACAGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCTTGAAGCCAAATACTaGATAAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILEAKY*IKRSFP
Trigger: TGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
CDS-3UTR TCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLVVKEV*GFFASS
Trigger: AGAACTTGCAAAGAAACCTCATACCTCTTTAACAAC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTAGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLVVKEV*GFFASS
Trigger: AGAACTTGCAAAGAAACCTCATACCTCTTTAACAAC...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: FEQEHEGSIYYPICKFIAVVKEV*GFFASS
Trigger: AGAACTTGCAAAGAAACCTCATACCTCTTTAACAAC...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATCATTGGGCAGCTTTaGTGTGCTGTTAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTIIGQL*CAVRRT
Trigger: AGTTCTTCTAACAGCACATCAAAGCTGCCCAATGAT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATCATTGGGCAGCTTTaGTGTGCTGTTAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFIIGQL*CAVRRT
Trigger: AGTTCTTCTAACAGCACATCAAAGCTGCCCAATGAT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAAAGGATTTTGCTGCTTaGGCACTTGTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTKDFAA*ALVFLE
Trigger: CTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTT...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTTCATGGGCCTTCACTaGGTTACTTGTAGCATTCTA +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCFMGLH*VTCSIL
Trigger: TAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAGCTCTGTATGTCAGCTaGGAAAAGCATTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLALYVS*EKHSES
Trigger: TGATTCAGAATGCTTTTCTCAGCTGACATACAGAGC...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGCTCTGTATGTCAGCTaGGAAAAGCATTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTALYVS*EKHSES
Trigger: TGATTCAGAATGCTTTTCTCAGCTGACATACAGAGC...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGATTGCTTTCCTACAATaGACTGTCCTTCTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRIAFLQ*TVLLKA
Trigger: GGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAAT...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAATCTCATTTGTGCACTaGATTAAGTCCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGISFVH*IKSQKG
Trigger: ACCTTTCTGGGACTTAATTCAGTGCACAAATGAGAT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR GCA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCCATTCATCTCATTTGTaGACTGAATTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAHSSHL*TELSSP
Trigger: TGGACTACTTAATTCAGTGCACAAATGAGATGAATG...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSINSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATGTAGTTGCCCTGCTTaGAGCTGTAGAATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLCSCPA*SCRIFD
Trigger: ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTATATTAAGGTTGGTTaGGTCATTACAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHYIKVG*VITGTL
Trigger: AAGTGTTCCTGTAATGACGCAACCAACCTTAATATA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGCACCGATCAACAGTaGAGTTTAATTCTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLSTDQQ*SLILRL
Trigger: TAAACGAAGAATTAAACTGCACTGTTGATCGGTGCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTATTGTGGAAAATGCATaGCATTCATTGTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIIVENA*HSLLQH
Trigger: ATGCTGCAACAATGAATGGCATGCATTTTCCACAAT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGAAAACCCGACACGTTaGTGCCATTCTAAATTTAGA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGENPTR*CHSKFR
Trigger: TCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTTC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR CCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACAAATATGTCAATGGCTaGTGCAGTCATTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNKYVNG*CSHYPS
Trigger: GGAGGGATAATGACTGCACCAGCCATTGACATATTT...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTGATTGCCCACAAGGTTaGCTAAAGATGAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSDCPQG*LKMNPS
Trigger: ACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATC...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAACACTTCCCATTTGTaGAGGAATTCCATATCCTAT +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLNTSHL*RNSISY
Trigger: ATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAACACTTCCCATTTGTaGAGGAATTCCATATCCTAT +
Preference number: 4 (lower is better)
Translates to: LEVRILLLEHLSFWSNSINTSHL*RNSISY
Trigger: ATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGTACTCTGAACCCTATGCACTACTAAATAGGCAATATGATACAATCAAAGGTTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: MYSEPYALLNRQYDTIKGSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...ACCTTTGATTGTATCATATTGCCTATTTAGTAGTGCATAGGGTTCAGAGTACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTCCCAATTTCCTTCATaGGCCTTCACTGAGTTACTT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCSQFPS*AFTELL
Trigger: AAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR TCA 90 bp ATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTCTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 4 (lower is better)
Translates to: IFEQEHEGSIYYPICKFILSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...AATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSNFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRNFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCAACTTTGAGGAACTCTaGGATTCTTGTCATCCTAGT +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCNFEEL*DSCHPS
Trigger: ACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QQECLNSCTELLSYNELSVVKEV*GFFASS
Trigger: AGAACTTGCAAAGAAACCTCATACCTCTTTAACAAC...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGTTGTTAAAGAGGTATaGGGTTTCTTTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGVVKEV*GFFASS
Trigger: AGAACTTGCAAAGAAACCTCATACCTCTTTAACAAC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR TCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTCACCACTACTTTTTGTaGGGAAAGGATTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLHHYFL*GKDLSL
Trigger: CAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTG...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCACCACTACTTTTTGTaGGGAAAGGATTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCHHYFL*GKDLSL
Trigger: CAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000630913.2
CDS-3UTR TCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTCCAACAAACATTTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAAATGTTTGTTGG...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCCAACAAACATTTCATaGGTAGGTGTCCTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTPTNIS*VGVLVV
Trigger: TACTACTAGGACACCTACTCATGAAATGTTTGTTGG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR TCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTAGGAAAGTCTTGAAGTaGAAGCAATTCCTCACATTC +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSARKVLK*KQFLTF
Trigger: GAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCT...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATCCCTTAAACTTACCTaGCTAAAGGCATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLSLKLT*LKASDQ
Trigger: TTGATCAGATGCCTTTAGTCAGGTAAGTTTAAGGGA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR GCA 90 bp TTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTACATTCATCTCATTTGTaGACTGAATTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: FFPSKEAKCCSKASRRLLHSSHL*TELSSP
Trigger: TGGACTACTTAATTCAGTGCACAAATGAGATGAATG...TAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAGCACCGATCAACAGTaGAGTTTAATTCTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGSTDQQ*SLILRL
Trigger: TAAACGAAGAATTAAACTGCACTGTTGATCGGTGCT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGCGTATTGTGGAAAATaGATGCCATTCATTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCAYCGK*MPFIVA
Trigger: TGCAACAATGAATGGCATGCATTTTCCACAATACGC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATACATCTGAAGAAATaGAAAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWIHLKK*KGEHHH
Trigger: GTGGTGATGTTCACCTTTCCATTTCTTCAGATGTAT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAACACTTCCCATTTGTaGAGGAATTCCATATCCTAT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGNTSHL*RNSISY
Trigger: ATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATCCTCACATTCATTTTaGAAAGGCCCTAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGSSHSF*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAAATGAATGTGAGGA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTCCTCACATTCATTTTaGAAAGGCCCTAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWSSHSF*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAAATGAATGTGAGGA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTATATGATCATAACATaGCACGAGCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLYMIIT*HEPKKM
Trigger: CATTTTCTTTGGCTCGTGCCATGTTATGATCATATA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCTTGAAGCCAAATACTaGATAAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSLEAKY*IKRSFP
Trigger: TGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCTTGAAGCCAAATACTaGATAAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCLEAKY*IKRSFP
Trigger: TGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACCTTGAAGCCAAATACTaGATAAAACGCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNLEAKY*IKRSFP
Trigger: TGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAG...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACACTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTLSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSLSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCTCTCTTCACTTTTGTaGAATCAAATGCAACTTGTC +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTLSSLL*NQMQLV
Trigger: GACAAGTTGCATTTGATTTCACAAAAGTGAAGAGAG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCTGAGAAAAGCATTCTaGATCAGATTCATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSLRKAF*IRFILV
Trigger: CACAAGAATGAATCTGATTCAGAATGCTTTTCTCAG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTCTGAGAAAAGCATTCTaGATCAGATTCATTCTTGTG +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSALRKAF*IRFILV
Trigger: CACAAGAATGAATCTGATTCAGAATGCTTTTCTCAG...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR TCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTCTTTATCATGTACTCTaGACCCTATGCACTACTAAA +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLLYHVL*TLCTTK
Trigger: TTTAGTAGTGCATAGGGTTCAGAGTACATGATAAAG...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR GCA 90 bp ATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTCATTCATCTCATTTGTaGACTGAATTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: IFEQEHEGSIYYPICKFIHSSHL*TELSSP
Trigger: TGGACTACTTAATTCAGTGCACAAATGAGATGAATG...AATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGACATGTCATATCCTTaGAATCCACTTTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGDMSYP*NPLLSK
Trigger: TTTGGATAAAAGTGGATTGCAAGGATATGACATGTC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
CDS-3UTR GCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGAATTCCTTCATTGTATaGTGCAAACAGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRNSFIV*CKQSNG
Trigger: GCCATTAGACTGTTTGCAGCATACAATGAAGGAATT...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATATATTAAGGTTGGTTaGGTCATTACAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGYIKVG*VITGTL
Trigger: AAGTGTTCCTGTAATGACGCAACCAACCTTAATATA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTATATTAAGGTTGGTTaGGTCATTACAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWYIKVG*VITGTL
Trigger: AAGTGTTCCTGTAATGACGCAACCAACCTTAATATA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR GCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAGCACCGATCAACAGTaGAGTTTAATTCTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTSTDQQ*SLILRL
Trigger: TAAACGAAGAATTAAACTGCACTGTTGATCGGTGCT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATTGTGGAAAATGCATaGCATTCATTGTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFIVENA*HSLLQH
Trigger: ATGCTGCAACAATGAATGGCATGCATTTTCCACAAT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCATTCATCTCATTTGTaGACTGAATTAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCHSSHL*TELSPR
Trigger: TCTGGGACTTAATTCAGTGCACAAATGAGATGAATG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR CCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTATACATCTGAAGAAATaGAAAGGTGAACATCACCAC +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSIHLKK*KGEHHH
Trigger: GTGGTGATGTTCACCTTTCCATTTCTTCAGATGTAT...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAACACTTCCCATTTGTaGAGGAATTCCATATCCTAT +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFNTSHL*RNSISY
Trigger: ATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTAACACTTCCCATTTGTaGAGGAATTCCATATCCTAT +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSNTSHL*RNSISY
Trigger: ATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGGCCCTAATGTCAAATaGAAAATAATGACATGCCAA +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLGPNVK*KIMTCQ
Trigger: TTGGCATGTCATTATTTTCCATTTGACATTAGGGCC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGGCCCTAATGTCAAATaGAAAATAATGACATGCCAA +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTGPNVK*KIMTCQ
Trigger: TTGGCATGTCATTATTTTCCATTTGACATTAGGGCC...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTTCCTCACATTCATTTTaGAAAGGCCCTAATGTCAAA +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSSSHSF*KGPNVK
Trigger: TTTGACATTAGGGCCTTTCCAAAATGAATGTGAGGA...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCTTGGAAATGTCACCTaGTTTTGTTTATCTCTACTC +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLGNVT*FCLSLL
Trigger: GAGTAGAGATAAACAAAACCAGGTGACATTTCCAAG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR GCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACACATTCATCTCATTTGTaGACTGAATTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTHSSHL*TELSSP
Trigger: TGGACTACTTAATTCAGTGCACAAATGAGATGAATG...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTCATTCATCTCATTTGTaGACTGAATTAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAHSSHL*TELSSP
Trigger: TGGACTACTTAATTCAGTGCACAAATGAGATGAATG...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGACATGTCATATCCTTaGAATCCACTTTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLDMSYP*NPLLSK
Trigger: TTTGGATAAAAGTGGATTGCAAGGATATGACATGTC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTGACATGTCATATCCTTaGAATCCACTTTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTDMSYP*NPLLSK
Trigger: TTTGGATAAAAGTGGATTGCAAGGATATGACATGTC...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTGACATGTCATATCCTTaGAATCCACTTTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSDMSYP*NPLLSK
Trigger: TTTGGATAAAAGTGGATTGCAAGGATATGACATGTC...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR GCA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATATATTAAGGTTGGTTaGGTCATTACAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTYIKVG*VITGTL
Trigger: AAGTGTTCCTGTAATGACGCAACCAACCTTAATATA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR GCA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGTATATTAAGGTTGGTTaGGTCATTACAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRYIKVG*VITGTL
Trigger: AAGTGTTCCTGTAATGACGCAACCAACCTTAATATA...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTATATGATCATAACATaGCACGAGCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAYMIIT*HEPKKM
Trigger: CATTTTCTTTGGCTCGTGCCATGTTATGATCATATA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CCA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTATATGATCATAACATaGCACGAGCCAAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: GFINCIDTFSYKLVPISFYMIIT*HEPKKM
Trigger: CATTTTCTTTGGCTCGTGCCATGTTATGATCATATA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS GCA 90 bp GTGGCCTTGCATACTGTCTTGGATACGGCAGAGCCGGTGACACTGTaGTGGGCGGCAGTGATTCGGTCCGTCAGGCTCTGGCCGGACATC +
Preference number: 5 (lower is better)
Translates to: VALHTVLDTAEPVTL*WAAVIRSVRLWPDI
Trigger: GATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000531558.1
ENST00000532041.5
ENST00000532317.5
ENST00000534412.5
ENST00000630913.2
CDS CCA 90 bp GCCTTGCATACTGTCTTGGATACGGCAGAGCCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCCGTCAGGCTCTGGCCGGACATCTCT +
Preference number: 5 (lower is better)
Translates to: ALHTVLDTAEPVTLC*AAVIRSVRLWPDIS
Trigger: AGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000531558.1
ENST00000532041.5
ENST00000532317.5
ENST00000534412.5
ENST00000630913.2
CDS CCA 90 bp GCTCTGCAAAGGGGTCCTTTCCTGAAGCTCTGTGAGGACTGTGACTaGAGGGGCTGGATGCTGCCGACAGCTGTGCTCCTGATACAGGGC +
Preference number: 5 (lower is better)
Translates to: ALQRGPFLKLCEDCD*RGWMLPTAVLLIQG
Trigger: GCCCTGTATCAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGTCACAGTCCTCACAGAGCTTCAGGAAAGGACCCCTTTGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS-3UTR CAA 90 bp CCACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PLWSEIDQCLPGKTLHWKALHTV*DTAEPV
Trigger: CACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGC...TTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCCAGATGGGTGAAAAGTaGGCTGCTGCAAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: SACQGRHCIGKCSCPACSQMGEK*AAANQA
Trigger: TGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTG...GCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp TTCCGATGCCAAGATTGCCCACAAGGTTGGCTAAAGATGAATCCAAGTCATCAGCAGGGGGTGCCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: FRCQDCPQGWLKMNPSHQQGVPL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGGCACCCCCTG...CTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS TCA 90 bp ACTAACTTGCTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTGAGAAGTCCACCCCCAGAATCTACA +
Preference number: 5 (lower is better)
Translates to: TNLLGGSLATGRFWF*EATVGLRSPPPEST
Trigger: TGTAGATTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526961.5
ENST00000529760.5
ENST00000530542.1
ENST00000530692.5
ENST00000532603.5
CDS TCA 90 bp ACAGCTGTGCTCCTGATACAGGGCCAAAGGGGTTTGGAGGTCTCATaGCAGGCTGGCTGTATATTAAGGTTGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: TAVLLIQGQRGLEVS*QAGCILRLVASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS-3UTR CAA 90 bp GGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTTCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: GRHCIGKCSCPACSCRIFSWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...AAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: VRDRPVLAREDTALESVVEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...AACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: SACQGRHCIGKCSCPACSRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...GCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp CCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTAGGGGCCCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: PSKEAKCCSKASRRLLGAHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...GGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp CTTGCTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGGTTCTGAGAGGCCACTGTAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: LARWEFGNRKVLVLRGHCRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...ACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp CTTGCTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGGTTCTGAGAGGCCACTGTTCTGTCAATTCCAACTaGCTCTGCAACTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LARWEFGNRKVLVLRGHCSVNSN*LCNFEE
Trigger: TTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGA...ACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp GGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: GRHCIGKCSCPACSCRIFEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...AAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: SACQGRHCIGKCSCPACSRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...GCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: TLVRDRPVLAREDTALESEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...ACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATGTCGGGCACTCCCTaGCCCCCGCCTCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWMSGTP*PPPQFS
Trigger: GCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACAT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS GCA 90 bp GGGTTTGGAGGTCTCATGACAGGCTGGCTGTATATTAAGGTTGGTTaGGTCATTACAGGAACACTTCCCATTTGTGGAGGCATTGTTGCA +
Preference number: 5 (lower is better)
Translates to: GFGGLMTGWLYIKVG*VITGTLPICGGIVA
Trigger: TGCAACAATGCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356360.9
ENST00000532603.5
CDS CCA 90 bp AACACTTCCCATTTGTGGAGGAATTCCATATCCTATCATGCCTGTTaGTGTAGTAGCAGGATAGGCCATTACAGGGGGTGCGTATTGTGG +
Preference number: 5 (lower is better)
Translates to: NTSHLWRNSISYHAC*CSSRIGHYRGCVLW
Trigger: CCACAATACGCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526907.1
ENST00000526961.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAALHTV*DTAEPV
Trigger: CACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGC...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CTCATGACAGGCTGGCTGTATATTAAGGTTGGTTGCGTCATTACAGGAACACTTTTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LMTGWLYIKVGCVITGTLLLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...AAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAATGTCGGGCACTCCCTaGCCCCCGCCTCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLMSGTP*PPPQFS
Trigger: GCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACAT...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATGTCGGGCACTCCCTaGCCCCCGCCTCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTMSGTP*PPPQFS
Trigger: GCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACAT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCCAGGGGGTGCCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAQGVPL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGGCACCCCCTG...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS TCA 90 bp AGAAGGAGTGAATCCTCCCCATGTACTTGCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGGGTGAAAAGTTGGCTGCTGCAAATC +
Preference number: 5 (lower is better)
Translates to: RRSESSPCTCYLRSS*HRMYRWVKSWLLQI
Trigger: GATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGATTCACTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528398.5
ENST00000529016.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: FEQEHEGSIYYPICKFIAALHTV*DTAEPV
Trigger: CACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGC...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIALHTV*DTAEPV
Trigger: CACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CCACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: PLWSEIDQCLPGKTLHWKRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...TTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TACATCATTCTTAGTGGTTCCATTTCCGATGCCAAGATTGCCCACAAGGTTGGCTTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: YIILSGSISDAKIAHKVGFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...GCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp AGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: RPVLAREDTALESVVALLLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...AAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS TCA 90 bp ATCATCAACAGCATCTCCCCATGTACTTGCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGGGTGAAAAGTTGGCTGCTGCAAATC +
Preference number: 5 (lower is better)
Translates to: IINSISPCTCYLRSS*HRMYRWVKSWLLQI
Trigger: GATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATGCTGTTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526033.5
ENST00000526961.5
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLSWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: LNRSMKAAFITPFVSSLLSWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...TAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTTCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: FEQEHEGSIYYPICKFIASWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTGGTGCAACCTTTGGTaGCCAGTTAGATCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHWCNLW*PVRSPS
Trigger: ACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCAGGGGGTGCCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWQGVPL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGGCACCCCCTG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTTACAGGGGGTGCCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLLQGVP*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGAGGCCACTGTTGGTTaGAGAAGTCCACCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIEATVG*RSPPPE
Trigger: TTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCTC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
CDS GCA 90 bp ACCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGCTGCCTaGTTTTCCCTTTCATCCACTTTGGTCAGAGATAGACCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: TFKAFKRACSSSNAA*FSLSSTLVRDRPVL
Trigger: AAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533350.1
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLALHTV*DTAEPV
Trigger: CACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGC...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGSWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GGCATCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCTCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: GIFEQEHEGSIYYPICKFSLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...GAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ACACTTCCCATTTGTGGAGGAATTCCATATCCTATCATGCCTGTTGGTGTAGTATCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: TLPICGGIPYPIMPVGVVSLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...TACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACGATCTCCCCATGTACTaGCTACCTGAGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHDLPMY*LPEKQL
Trigger: CAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATC...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTGGTGCAACCTTTGGTaGCCAGTTAGATCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLWCNLW*PVRSPS
Trigger: ACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTTTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTGGTGCAACCTTTGGTaGCCAGTTAGATCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: FSFLPRKLNVVPKHQEDCWCNLW*PVRSPS
Trigger: ACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCA...GCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTTTCTTTGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: VSLQVLLGAVPLKLSNVPQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...AGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTTACAGGGGGTGCCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLQGVP*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCATCTCCCCATGTACTaGCTACCTGAGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHHLPMY*LPEKQL
Trigger: CAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526033.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGGAGGCCACTGTTGGTTaGAGAAGTCCACCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWEATVG*RSPPPE
Trigger: TTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCTC...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACATCCTCCCCATGTACTaGCTACCTGAGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHILPMY*LPEKQL
Trigger: CAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGAT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCATCCTCCCCATGTACTaGCTACCTGAGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAILPMY*LPEKQL
Trigger: CAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGAT...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFSWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTAACATTTCGTGGGTCGTGGCCTaGCATACTGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: EHEGSIYYPICKFIAINISWVVA*HTVLDT
Trigger: CGTATCCAAGACAGTATGCAAGGCCACGACCCACGA...AATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000531558.1
ENST00000532041.5
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFASLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TCTGCAACTTTGAGGAACTCTGAGATTCTTGTCATCCTAGTTAGGAACTTCTTAGATCTCCCCATGTACTaGCTACCTGAGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SATLRNSEILVILVRNFLDLPMY*LPEKQL
Trigger: CAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATC...TAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGLLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTAGGGGCCCTTCTTTTCACCTGGTaGACTCCAATTTACATCATT +
Preference number: 5 (lower is better)
Translates to: PSKEAKCCSKASRRLLGALLFTW*TPIYII
Trigger: AATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAG...GGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGACATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTTTGTGGAGGCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIFVEAL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGCCTCCACAAA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532603.5
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGGAACACTTCCCATTaGTGGAGGCATTGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRNTSH*WRHCCS
Trigger: GCTGCAACAATGCCTCCACAAATGGGAAGTGTTCCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532603.5
CDS-3UTR CAA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGTTACAGGGGGTGCCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRLQGVP*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAA...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTTACAGGGGGTGCCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLQGVP*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCGAGGCCACTGTTGGTTaGAGAAGTCCACCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCEATVG*RSPPPE
Trigger: TTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCTC...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532603.5
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGCATGCCATTCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIACHSL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGAATGGCATGC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACTACAGGGGGTGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHYRGCV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCACCCCCTGTA...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAGAGATAGACCAGTGCTaGCCAGGGAAGACACTGCAT +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLEIDQC*PGKTLH
Trigger: ATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTC...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCAGATGGGTGAAAAGTaGGCTGCTGCAAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIQMGEK*AAANQA
Trigger: TGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCAGATGGGTGAAAAGTaGGCTGCTGCAAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLQMGEK*AAANQA
Trigger: TGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTG...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNLLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTTTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSLLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTTGCTAGGTGGGAGTTaGGCAACAGGAAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: REFLRDSDLWTCLKIFSALLGGS*ATGRFW
Trigger: CCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTTTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTGGTGCAACCTTTGGTaGCCAGTTAGATCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLWCNLW*PVRSPS
Trigger: ACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTGCAACCTTTGGTaGCCAGTTAGATCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCWCNLW*PVRSPS
Trigger: ACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTTGGTGCAACCTTTGGTaGCCAGTTAGATCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTWCNLW*PVRSPS
Trigger: ACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCA...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACACATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCATTCCAAGCGGTTGTaGGTGCAACCTTTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCHSKRL*VQPLVA
Trigger: GGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCCATTTGTGGAGGCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCPFVEA*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGCCTCCACAAATGG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532603.5
CDS-3UTR CAA 90 bp TTAAGGTTGGTTGCGTCATTACAGGAACACTTCCCATTTGTGGAGGAATTCCATGGCTGTATATTAAGGTaGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: LRLVASLQEHFPFVEEFHGCILR*VASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCC...ATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFALEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGSLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTGAGGCCACTGTTGGTTaGAGAAGTCCACCTAGTTCA +
Preference number: 5 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAEATVG*RSPPSS
Trigger: TGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTC...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCAGCATTCCAAGCGGTaGTTGGTGCAACCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTQHSKR*LVQPLV
Trigger: AACCAAAGGTTGCACCAACAACCGCTTGGAATGCTG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCGGCTGTATATTAAGGTaGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFAGCILR*VASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCC...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GTTTCTTTGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: VSLQVLLGAVPLKLSNVPLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...AGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTCACCCCAAAAGAGTCCTGTaGAAATACAGTAAAGGACAC +
Preference number: 5 (lower is better)
Translates to: CIDTFSYKLVPISFMGLHPKRVL*KYSKGH
Trigger: GTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGG...GTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCGCATGCCATTCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFACHSL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGAATGGCATGC...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTGCATGCCATTCATTGTaGCAGCATTCCAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSACHSL*QHSKRL
Trigger: CAACCGCTTGGAATGCTGCAACAATGAATGGCATGC...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532317.5
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCATCCTCCCCATGTACTaGCTACCTGAGAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCILPMY*LPEKQL
Trigger: CAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGAT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTGTTGTAATGAGAGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIVVMRD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCTCTCATTACAAC...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTGTTGTAATGAGAGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: FEQEHEGSIYYPICKFIAVVMRD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCTCTCATTACAAC...AGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTTTGAACAGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGTCTGTCAATTCCAACTaGCTCTGCAACTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: SLNRSMKAAFITPFVSSLSVNSN*LCNFEE
Trigger: TTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGA...CAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534412.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGTACTCTGAACCCTATGCACTACTAAATAGGCAATATGATACAATCAAAGGTTCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: MYSEPYALLNRQYDTIKGSLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...ACCTTTGATTGTATCATATTGCCTATTTAGTAGTGCATAGGGTTCAGAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393346.8
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTCCCTTTCATCCACTTaGGTCAGAGATAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCSLSST*VRDRPV
Trigger: CACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSIRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACACAGATGGGTGAAAAGTaGGCTGCTGCAAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTQMGEK*AAANQA
Trigger: TGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTG...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTCAGATGGGTGAAAAGTaGGCTGCTGCAAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTQMGEK*AAANQA
Trigger: TGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTG...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCAGATGGGTGAAAAGTaGGCTGCTGCAAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSQMGEK*AAANQA
Trigger: TGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTTTCCGATGCCAAGATaGCCCACAAGGTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCFPMPR*PTRLAK
Trigger: TTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCATGGGCCTTGGCTGTATATTAAGGTaGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: NCIDTFSYKLVPISFMGLGCILR*VASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCC...AAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFATAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFALRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAATGCATGCCATTCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFNACHS*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGAATGGCATGCATT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCAATGCATGCCATTCATaGTTGCAGCATTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCNACHS*LQHSKR
Trigger: CCGCTTGGAATGCTGCAACAATGAATGGCATGCATT...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTACAGGGGGTGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCYRGCV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCACCCCCTGTA...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTTACAGGGGGTGCGTATaGTGGAAAATGCATGCCATT +
Preference number: 5 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLYRGCV*WKMHAI
Trigger: AATGGCATGCATTTTCCACAATACGCACCCCCTGTA...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGGAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTAACAGTTGTAATGAGAGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: RSMKAAFITPFVSSLLLTVVMRD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCTCTCATTACAAC...TGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532041.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGTTGTAATGAGAGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGVVMRD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCTCTCATTACAAC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGGTATATGATCATAACATGGCACGAGCCAAAGAAAATGTTCAAGGACTTTGCCAGACATGTCATATCCTaGCAATCCACTTTTATCCAA +
Preference number: 5 (lower is better)
Translates to: RYMIITWHEPKKMFKDFARHVIS*QSTFIQ
Trigger: TTGGATAAAAGTGGATTGCAAGGATATGACATGTCT...GGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCTCTGTCAATTCCAACTaGCTCTGCAACTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: QQECLNSCTELLSYNELSSVNSN*LCNFEE
Trigger: TTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGA...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: QQECLNSCTELLSYNELSRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CAACAAGAATGCTTAAACTCATGTACAGAATTGCTTTCCTACAATGAACTGTCCGGAAAGGATTTAAGCTaGGAATGGCATCATCAACAG +
Preference number: 5 (lower is better)
Translates to: QQECLNSCTELLSYNELSGKDLS*EWHHQQ
Trigger: CTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCC...GGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR CAA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAAGATTGCCCACAAGGTaGGCTAAAGATGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTRLPTR*AKDESK
Trigger: CTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCT...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGGGCTGTATATTAAGGTaGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWGCILR*VASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCC...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAGGCTGTATATTAAGGTaGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGGCILR*VASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCC...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTAGGAACACTTCCCATTaGTGGAGGAATTCCATATCC +
Preference number: 5 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLRNTSH*WRNSIS
Trigger: GGATATGGAATTCCTCCACAAATGGGAAGTGTTCCT...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTACTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACTCTCTGGAAGTAAGGATTTaGCTGCTTGAGCACTTGTCT +
Preference number: 5 (lower is better)
Translates to: FTQSTDQQCSLILRLLNSLEVRI*LLEHLS
Trigger: AGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG...AGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTACAGCAGTTTGGATTTaGCTGGAAGTAAGGATTTTG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSITAVWI*LEVRIL
Trigger: CAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGT...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCTTTCCTTGAGAGGCTaGGAAATGTCACCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLSLRG*EMSPGF
Trigger: AAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR CAA 90 bp GTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACAGATCTTGTTGTAATGAGAGATTaGAAGACCACCACCCAACTA +
Preference number: 5 (lower is better)
Translates to: VLTGVERIEGLVTKKTDLVVMRD*KTTTQL
Trigger: TAGTTGGGTGGTGGTCTTCAAATCTCTCATTACAAC...AAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATCTGTCAATTCCAACTaGCTCTGCAACTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLSVNSN*LCNFEE
Trigger: TTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTCTGTCAATTCCAACTaGCTCTGCAACTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFSVNSN*LCNFEE
Trigger: TTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTTCTGTCAATTCCAACTaGCTCTGCAACTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTSVNSN*LCNFEE
Trigger: TTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGA...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCAGGTATGAGGTTTCTTaGCAAGTTCTTTTAGGCGCT +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFRYEVS*QVLLGA
Trigger: AGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCT...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAAACGGAAAGGATTTAAGCTaGGAATGGCATCATCAACAG +
Preference number: 5 (lower is better)
Translates to: VFTQSTDQQCSLILRLLNGKDLS*EWHHQQ
Trigger: CTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCC...GTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393346.8
ENST00000526033.5
CDS-3UTR CAA 90 bp GAGCATGAAGGCAGCATTTATTACCCCATTTGTAAGTTCATTGCTATTAACATTGGAAAGGATTTAAGCTaGGAATGGCATCATCAACAG +
Preference number: 5 (lower is better)
Translates to: EHEGSIYYPICKFIAINIGKDLS*EWHHQQ
Trigger: CTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCC...AATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630913.2
CDS-3UTR CAA 90 bp CTGGAAGTAAGGATTTTGCTGCTTGAGCACTTGTCTTTTTGGAGTAATTCCATTCTTCTTTTCACCTGGTaGACTCCAATTTACATCATT +
Preference number: 5 (lower is better)
Translates to: LEVRILLLEHLSFWSNSILLFTW*TPIYII
Trigger: AATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAG...AATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTGGCTGTATATTAAGGTaGGTTGCGTCATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: REFLRDSDLWTCLKIFSAGCILR*VASLQE
Trigger: TTCCTGTAATGACGCAACCAACCTTAATATACAGCC...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: REFLRDSDLWTCLKIFSALLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACATTGCTGCTTGAGCACTaGTCTTTTTGGAGTAATTCC +
Preference number: 5 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTLLLEH*SFWSNS
Trigger: GGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAA...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000530692.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCCCAAAAGAGTCCTGTaGAAATACAGTAAAGGACAC +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCPKRVL*KYSKGH
Trigger: GTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp TTATGGGTATTAACAGGAGTTGAAAGAATTGAAGGGTTAGTCACCAAAAAGACACCCAAAAGAGTCCTGTaGAAATACAGTAAAGGACAC +
Preference number: 5 (lower is better)
Translates to: LWVLTGVERIEGLVTKKTPKRVL*KYSKGH
Trigger: GTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGG...TGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATCACATTCATCTCATTaGTGCACTGAATTAAGTCCC +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGSHSSH*CTELSP
Trigger: GGGACTTAATTCAGTGCACAAATGAGATGAATGTGA...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR CAA 90 bp ATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAGACATGTCATATCCTaGCAATCCACTTTTATCCAA +
Preference number: 5 (lower is better)
Translates to: MEEESLRDLRDSSLDFAGRHVIS*QSTFIQ
Trigger: TTGGATAAAAGTGGATTGCAAGGATATGACATGTCT...TCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGCTTCTTTTCACCTGGTaGACTCCAATTTACATCATT +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWLLFTW*TPIYII
Trigger: AATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAG...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTATTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCTTAAGAGACAGCAGTTaGGATTTTGCTGGAAGTAAG +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLRDSS*DFAGSK
Trigger: CTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAA...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGATCCTAGGCACAGAATaGACTATAAGGATTAATGCA +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWILGTE*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATTCTGTGCCTAGGAT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAACTCATGTACAGAATaGCTTTCCTACAATGAACTG +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWNSCTE*LSYNEL
Trigger: CAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCTGGAAATGTCACCTGGTTTaGTTTATCTCTACTCCGAAA +
Preference number: 5 (lower is better)
Translates to: NGRREFKRFKRQQFGFCWKCHLV*FISTPK
Trigger: TTTCGGAGTAGAGATAAACAAAACCAGGTGACATTT...CCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528398.5
CDS-3UTR CAA 90 bp GGCTTTATAAACTGTATTGATACGTTCTCCTATAAACTAGTCCCAATTTCCTTCCTTCTTTTCACCTGGTaGACTCCAATTTACATCATT +
Preference number: 5 (lower is better)
Translates to: GFINCIDTFSYKLVPISFLLFTW*TPIYII
Trigger: AATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAG...GAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000630913.2
CDS-3UTR CAA 90 bp TCTAATGGAAGAAGAGAGTTTAAGAGATTTAAGAGACAGCAGTTTGGATTTTGCCTTCTTTTCACCTGGTaGACTCCAATTTACATCATT +
Preference number: 5 (lower is better)
Translates to: SNGRREFKRFKRQQFGFCLLFTW*TPIYII
Trigger: AATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAG...GCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000528398.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
ENST00000532603.5
ENST00000630913.2
CDS-3UTR CAA 90 bp GATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAATCCTAGGCACAGAATaGACTATAAGGATTAATGCA +
Preference number: 5 (lower is better)
Translates to: DVFTQSTDQQCSLILRLLILGTE*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATTCTGTGCCTAGGAT...TAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp ACTTTCCAAATAAGGGCTTTTCTTGATAGGTTACTGATTATGGGTATTAACAGGATCCTAGGCACAGAATaGACTATAAGGATTAATGCA +
Preference number: 5 (lower is better)
Translates to: TFQIRAFLDRLLIMGINRILGTE*TIRINA
Trigger: TGCATTAATCCTTATAGTCAATTCTGTGCCTAGGAT...CCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp AGATGTATTTACACAAAGCACCGATCAACAGTGCAGTTTAATTCTTCGTTTACTAACTCATGTACAGAATaGCTTTCCTACAATGAACTG +
Preference number: 5 (lower is better)
Translates to: RCIYTKHRSTVQFNSSFTNSCTE*LSYNEL
Trigger: CAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTT...AGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS-3UTR CAA 90 bp CGAGAATTCTTAAGAGATTCAGACCTATGGACTTGCCTTAAAATATTTAGTGCTAACTCATGTACAGAATaGCTTTCCTACAATGAACTG +
Preference number: 5 (lower is better)
Translates to: REFLRDSDLWTCLKIFSANSCTE*LSYNEL
Trigger: CAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTT...AGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393346.8
ENST00000526033.5
ENST00000532317.5
CDS CCA 72 bp ACTGTCTTGGATACGGCAGAGCCGGTGACACTGTGCTaGGCGGCAGTGATTCGGTCCGTCAGGCTCTGGCCG +
Preference number: 6 (lower is better)
Translates to: TVLDTAEPVTLC*AAVIRSVRLWP
Trigger: CGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356360.9
ENST00000393346.8
ENST00000526033.5
ENST00000531558.1
ENST00000532041.5
ENST00000532317.5
ENST00000534412.5
ENST00000630913.2
CDS CAA 90 bp TTCTTGGGCCCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACACTGTGCCCTTCCCGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: FLGPMISWVVALHTV*DTAEPVTLCPSRVS
Trigger: GCTGACCCGGGAAGGGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528256.1
CDS GCA 72 bp CATACTGTCTTGGATACGGCAGAGCCGGTGACACTGTaGTGGGCGGCAGTGATTCGGTCCGTCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: HTVLDTAEPVTL*WAAVIRSVRLW
Trigger: CCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356360.9
ENST00000393346.8
ENST00000526033.5
ENST00000531558.1
ENST00000532041.5
ENST00000532317.5
ENST00000534412.5
ENST00000630913.2
CDS CCA 72 bp AGGGGTCCTTTCCTGAAGCTCTGTGAGGACTGTGACTaGAGGGGCTGGATGCTGCCGACAGCTGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: RGPFLKLCEDCD*RGWMLPTAVLL
Trigger: CAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGTCACAGTCCTCACAGAGCTTCAGGAAAGGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS CAA 72 bp CCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACACTGTGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: PMISWVVALHTV*DTAEPVTLCWA
Trigger: CGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356360.9
ENST00000393346.8
ENST00000526033.5
ENST00000531558.1
ENST00000532041.5
ENST00000532317.5
ENST00000534412.5
ENST00000630913.2
CDS CAA 90 bp TTCTTGGGCCCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACAGTGATGGAACTCGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: FLGPMISWVVALHTV*DTAEPVTVMELARR
Trigger: CCGCCTGGCGAGTTCCATCACTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528411.1
CDS CCA 72 bp TTCCTGAAGCTCTGTGAGGACTGTGACTGGAGGGGCTaGATGCTGCCGACAGCTGTGCTCCTGATACAGGGC +
Preference number: 6 (lower is better)
Translates to: FLKLCEDCDWRG*MLPTAVLLIQG
Trigger: GCCCTGTATCAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGTCACAGTCCTCACAGAGCTTCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530692.5
CDS CAA 72 bp CCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACACTGTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: PMISWVVALHTV*DTAEPVTLCPS
Trigger: GGAAGGGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528256.1
CDS CAA 90 bp TTCTTGGGCCCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACACTGTGCTGGGCGGCAGTGATT +
Preference number: 6 (lower is better)
Translates to: FLGPMISWVVALHTV*DTAEPVTLCWAAVI
Trigger: AATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356360.9
ENST00000393346.8
ENST00000526033.5
ENST00000531558.1
ENST00000532041.5
ENST00000532317.5
ENST00000534412.5
ENST00000630913.2
CDS CAA 72 bp CCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACAGTGATGGAACTC +
Preference number: 6 (lower is better)
Translates to: PMISWVVALHTV*DTAEPVTVMEL
Trigger: GAGTTCCATCACTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528411.1
CDS CAA 72 bp CCCATGATCTCGTGGGTCGTGGCCTTGCATACTGTCTaGGATACGGCAGAGCCGGTGACACCCAGAAAGGTT +
Preference number: 6 (lower is better)
Translates to: PMISWVVALHTV*DTAEPVTPRKV
Trigger: AACCTTTCTGGGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531930.5
CDS TCA 72 bp CTAGGTGGGAGTTTGGCAACAGGAAGGTTCTGGTTCTaGGAGGCCACTGTTGGTTTGAGAAGTCCACCCCCA +
Preference number: 6 (lower is better)
Translates to: LGGSLATGRFWF*EATVGLRSPPP
Trigger: TGGGGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526961.5
ENST00000529760.5
ENST00000530542.1
ENST00000530692.5
ENST00000532603.5
CDS CAA 72 bp AAGTGTGTCCTCGTGTCTGTGGTTGAAACCAACAGCTaGACAAAGGAGGTGCAGCTGCCTTCACAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: KCVLVSVVETNS*TKEVQLPSQLP
Trigger: GGGAAGCTGTGAAGGCAGCTGCACCTCCTTTGTCAAGCTGTTGGTTTCAACCACAGACACGAGGACACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525162.5
CDS CCA 72 bp GGCAACAGGAAGGTTCTGGTTCTGAGAGGCCACTGTTaGTTTGAGAAGTCCACCCCCAGAATCTACAATAAC +
Preference number: 6 (lower is better)
Translates to: GNRKVLVLRGHC*FEKSTPRIYNN
Trigger: GTTATTGTAGATTCTGGGGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526961.5
ENST00000529760.5
ENST00000530542.1
ENST00000530692.5
ENST00000532603.5
CDS GCA 72 bp AGGCCATTACAGGGGGTGCGTATTGTGGAAAATGCATaGCATTCATTGTTGCAGCATTCCAAGCGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RPLQGVRIVENA*HSLLQHSKRLL
Trigger: CAACAACCGCTTGGAATGCTGCAACAATGAATGGCATGCATTTTCCACAATACGCACCCCCTGTAATGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526961.5
ENST00000529760.5
ENST00000530692.5
ENST00000532317.5
CDS TCA 72 bp AGCATCTCCCCATGTACTTGCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGGGTGAAAAGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: SISPCTCYLRSS*HRMYRWVKSWL
Trigger: CAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526033.5
ENST00000526961.5
CDS TCA 72 bp GAATCCTCCCCATGTACTTGCTACCTGAGAAGCAGTTaGCATAGGATGTACAGATGGGTGAAAAGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ESSPCTCYLRSS*HRMYRWVKSWL
Trigger: CAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528398.5
ENST00000529016.5
ENST00000529760.5
ENST00000532317.5
CDS TCA 72 bp CAGGAAGGTTCTGGTTCTGAGAGGCCACTGTTGGTTTaGGAAGTCCACCTAGTTCATCAAAGCCTTAAAGTT +
Preference number: 6 (lower is better)
Translates to: QEGSGSERPLLV*EVHLVHQSLKV
Trigger: AACTTTAAGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534375.1
CDS GCA 72 bp TGTCATATCCTACTACTGTACACGTCAGGTGTTACATaGTCACATTCCTCAGCTCTTCGGTTCATATGGTTC +
Preference number: 6 (lower is better)
Translates to: CHILLLYTSGVT*SHSSALRFIWF
Trigger: GAACCATATGAACCGAAGAGCTGAGGAATGTGAGCATGTAACACCTGACGTGTACAGTAGTAGGATATGACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528411.1
CDS GCA 72 bp CTGCCAACTGTGGGATGTTCACATTCATCTCATTTGTaGACTGAATTAAGTAGTCCAGGTGCTTTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: LPTVGCSHSSHL*TELSSPGAFSW
Trigger: CCAAGAAAAAGCACCTGGACTACTTAATTCAGTGCACAAATGAGATGAATGTGAACATCCCACAGTTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356360.9
ENST00000393346.8
ENST00000526033.5
ENST00000528256.1
ENST00000528411.1
ENST00000531930.5
ENST00000532041.5
ENST00000532317.5
ENST00000630913.2
CDS GCA 72 bp CTATCAACAGTGTCAACAGTGCAAAATTTTGGGCATTaGATAAACAGGGTTGCATCAGATGTCTACCACAGA +
Preference number: 6 (lower is better)
Translates to: LSTVSTVQNFGH*INRVASDVYHR
Trigger: TCTGTGGTAGACATCTGATGCAACCCTGTTTATGCAATGCCCAAAATTTTGCACTGTTGACACTGTTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526907.1
CDS CAA 72 bp TGTCTGCCAACTGTGGGATGTTCACATTCATCTCATTaGTGCACTGAATTAAGTAGTCCAGGTGCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: CLPTVGCSHSSH*CTELSSPGAFS
Trigger: AGAAAAAGCACCTGGACTACTTAATTCAGTGCACAAATGAGATGAATGTGAACATCCCACAGTTGGCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356360.9
ENST00000393346.8
ENST00000526033.5
ENST00000528256.1
ENST00000528411.1
ENST00000531930.5
ENST00000532041.5
ENST00000532317.5
ENST00000630913.2
CDS CAA 72 bp TCTATCAACAGTGTCAACAGTGCAAAATTTTGGGCATaGCATAAACAGGGTTGCATCAGATGTCTACCACAG +
Preference number: 6 (lower is better)
Translates to: SINSVNSAKFWA*HKQGCIRCLPQ
Trigger: CTGTGGTAGACATCTGATGCAACCCTGTTTATGCAATGCCCAAAATTTTGCACTGTTGACACTGTTGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526907.1