RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIAS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000131788

Ensembl transcript IDs: ENST00000369298.5, ENST00000369299.7, ENST00000393045.7, ENST00000393046.3, ENST00000463514.2, ENST00000472114.5, ENST00000475261.1, ENST00000484423.5, ENST00000498436.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCTGTCTGGCCCTTGGCCAGAGCCCCCAGAGGGATCAGAGTAGCTaGGGTTGGGACTCCACAGCATACTTGCTCAGTGTTGGGGGACAG +
Preference number: 1 (lower is better)
Translates to: VCLALGQSPQRDQSS*GWDSTAYLLSVGGQ
Trigger: CTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGTCCCAACCCCAGCTACTCTGATCCCTCTGGGGGCTCTGGCCAAGGGCCAGACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR TCA 90 bp GTGCTGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTaGAGGTCTGTCTGGCCCTTGGCCAGAGCCCCCAGAGGGATCAGA +
Preference number: 1 (lower is better)
Translates to: VLALSGRDEAKSRHL*RSVWPLARAPRGIR
Trigger: TCTGATCCCTCTGGGGGCTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR TCA 90 bp TGTTTGGCCGAAGGGAATGGAATAGACATGAAGAGACAATGGATGTaGAGAAGAAATAGAGCCATGGGTTTGGGTAATAAGAAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: CLAEGNGIDMKRQWM*RRNRAMGLGNKKRE
Trigger: CTCTCTCTTCTTATTACCCAAACCCATGGCTCTATTTCTTCTTCACATCCATTGTCTCTTCATGTCTATTCCATTCCCTTCGGCCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGGTCTGTCTGGCCCTTaGCCAGAGCCCCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQGLSGP*PEPPEG
Trigger: TCCCTCTGGGGGCTCTGGCCAAGGGCCAGACAGACC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTAGGGATCAGAGTAGCTaGGGTTGGGACTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPRDQSS*GWDSTA
Trigger: TGCTGTGGAGTCCCAACCCCAGCTACTCTGATCCCT...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR GCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGGGGTTCAAGAGAGGTaGCCCTTCCCCAAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGGVQER*PFPKRL
Trigger: GAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACCCC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAGGGATCAGAGTAGCTaGGGTTGGGACTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQRDQSS*GWDSTA
Trigger: TGCTGTGGAGTCCCAACCCCAGCTACTCTGATCCCT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR GCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGACTCCACAGCATACTTaGTCAGTGTTGGGGGACAGC +
Preference number: 2 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQTPQHT*SVLGDS
Trigger: GCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATGGTCTGTCTGGCCCTTaGCCAGAGCCCCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHGLSGP*PEPPEG
Trigger: TCCCTCTGGGGGCTCTGGCCAAGGGCCAGACAGACC...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAAAAAGTAGGCATCTGTaGAGGTCTGTCTGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEKSRHL*RSVWPL
Trigger: CAAGGGCCAGACAGACCTTCACAGATGCCTACTTTT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAAAGTAGGCATCTGTaGAGGTCTGTCTGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQKSRHL*RSVWPL
Trigger: CAAGGGCCAGACAGACCTTCACAGATGCCTACTTTT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTCCTCCTCTGTCATACTaGAGTAGGAGGCAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGPPLSY*SRRQGK
Trigger: CTTCCCCTGCCTCCTACTCCAGTATGACAGAGGAGG...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTAGACATAGTCAAGGCTaGGGGTTCAGCCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGRHSQG*GFSPSP
Trigger: AGGAGAAGGGCTGAACCCTCAGCCTTGACTATGTCT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR GCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGACATACCATCCCATTTaGCTCCCACTGCCTAGGTTA +
Preference number: 2 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQTYHPI*LPLPRL
Trigger: TAACCTAGGCAGTGGGAGGCAAATGGGATGGTATGT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR GCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGACATACCATCCCATTTaGCTCCCACTGCCTAGGTTA +
Preference number: 2 (lower is better)
Translates to: GSREVPLPQEALDIVKAETYHPI*LPLPRL
Trigger: TAACCTAGGCAGTGGGAGGCAAATGGGATGGTATGT...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAATAGAGCCATGGGTTTaGGTAATAAGAAGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEIEPWV*VIRRES
Trigger: GCTCTCTCTTCTTATTACCCAAACCCATGGCTCTAT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAGACATAGTCAAGGCTaGGGGTTCAGCCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHRHSQG*GFSPSP
Trigger: AGGAGAAGGGCTGAACCCTCAGCCTTGACTATGTCT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTTTCTCTGTCCATCTCTaGAACTGCCTGTCTCAGTTT +
Preference number: 2 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGFSVHL*NCLSQF
Trigger: AAACTGAGACAGGCAGTTTCAGAGATGGACAGAGAA...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR GCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAACTCCACAGCATACTTaGTCAGTGTTGGGGGACAGC +
Preference number: 2 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLTPQHT*SVLGDS
Trigger: GCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGT...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR TCA 72 bp TTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTaGAGGTCTGTCTGGCCCTTGGCCAGAGCCCCCAGA +
Preference number: 3 (lower is better)
Translates to: LSGRDEAKSRHL*RSVWPLARAPR
Trigger: TCTGGGGGCTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CAA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTCATACTTGCTCAGTGTaGGGGGACAGCGAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGHTCSV*GDSEVS
Trigger: GGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATG...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR GCA 72 bp ATCAGAGTAGCTGGGGTTGGGACTCCACAGCATACTTaGTCAGTGTTGGGGGACAGCGAAGTTTCCATAATC +
Preference number: 3 (lower is better)
Translates to: IRVAGVGTPQHT*SVLGDSEVSII
Trigger: GATTATGGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGTCCCAACCCCAGCTACTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CAA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATCATACTTGCTCAGTGTaGGGGGACAGCGAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHHTCSV*GDSEVS
Trigger: GGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATG...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR CCA 72 bp ATCATGGCTAAGGCCTTACATCCTCCTCTGTCATACTaGAGTAGGAGGCAGGGGAAGTCATCTTTGGAGTAT +
Preference number: 3 (lower is better)
Translates to: IMAKALHPPLSY*SRRQGKSSLEY
Trigger: ATACTCCAAAGATGACTTCCCCTGCCTCCTACTCCAGTATGACAGAGGAGGATGTAAGGCCTTAGCCATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR-3UTR CAA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATTTAAATATTAACCCTTaGGGTGCTGGCCTTGTCAGG +
Preference number: 3 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHLNINP*GAGLVR
Trigger: CCTGACAAGGCCAGCACCCAAAGGGTTAATATTTAA...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGAGGGGGCGCCGGAGTaGCGCTGCAGTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQEGAPE*RCSGSS
Trigger: GGAGCTCCCACTGCAGCGCCACTCCGGCGCCCCCTC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGAGGGGGCGCCGGAGTaGCGCTGCAGTGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEEGAPE*RCSGSS
Trigger: GGAGCTCCCACTGCAGCGCCACTCCGGCGCCCCCTC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGGGAGCTCCCCAGCGTaGGGGCCAGTGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEGSSPA*GPVGPE
Trigger: TTCTGGGCCCACTGGCCCCCACGCTGGGGAGCTCCC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGGAGTGGCGCTGCAGTaGGAGCTCCCCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEGVALQ*ELPSVG
Trigger: CCCCACGCTGGGGAGCTCCCACTGCAGCGCCACTCC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCGCCGGAGTGGCGCTaGAGTGGGAGCTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGAPEWR*SGSSPA
Trigger: CGCTGGGGAGCTCCCACTGCAGCGCCACTCCGGCGC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGGCGGCTGGGCCTCTTaGGCTCGGCCCCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEGGWAS*ARPHSW
Trigger: CCAAGAATGGGGCCGAGCCCAAGAGGCCCAGCCGCC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGCAATAGGCCGGGCCTaGCTCCCAGACCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEAIGRA*LPDPCR
Trigger: TCTGCAGGGGTCTGGGAGTCAGGCCCGGCCTATTGC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTGGCCCCATTCTTGGTTaGGGGAAGGTAACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPGPILG*GKVTRQ
Trigger: CTGCCGGGTTACCTTCCCCCAACCAAGAATGGGGCC...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGTGGGCGCAGGTaGGGGCACGACAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGAGGRR*GHDKGQ
Trigger: CTGTCCCTTGTCGTGCCCTCACCTGCGCCCACCTGC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGGCAATAGGCCGGGCCTaGCTCCCAGACCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEAIGRA*LPDPCR
Trigger: TCTGCAGGGGTCTGGGAGTCAGGCCCGGCCTATTGC...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTCTGGCTAGAAGTGGATaGAAGGGTGGTGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPLARSG*KGGGPD
Trigger: ATCCGGCCCACCACCCTTGCATCCACTTCTAGCCAG...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGCAGCATCGAAGCTCTaGAGGTGGGCGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQAASKL*RWAQVR
Trigger: CCTCACCTGCGCCCACCTGCAGAGCTTCGATGCTGC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTTGGGGCCCAGCAGGGTaGCAGGGGCCAACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGWGPAG*QGPTAL
Trigger: CAACGCTGTTGGCCCCTGGCACCCTGCTGGGCCCCA...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGGAGGTGCAGAGCCTTaGCCAGGAGCTCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQGGAEP*PGARAS
Trigger: GGAAGCACGAGCTCCTGGCCAAGGCTCTGCACCTCC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAATCCCTAGCGGGCACATaGGTGACACCCGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAESLAGT*VTPGDL
Trigger: CAAGTCTCCGGGTGTCACTCATGTGCCCGCTAGGGA...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGCAGGTGGGCGCAGGTaGGGGCACGACAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSAGGRR*GHDKGQ
Trigger: CTGTCCCTTGTCGTGCCCTCACCTGCGCCCACCTGC...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTAGCCTACAGGAGAGGTaGCAGGGGGCAAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPSLQER*QGAKRE
Trigger: TTCTCTCTTTGCCCCCTGGCACCTCTCCTGTAGGCT...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGGCCCCATTCTTGGTTaGGGGAAGGTAACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQGPILG*GKVTRQ
Trigger: CTGCCGGGTTACCTTCCCCCAACCAAGAATGGGGCC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCGGCTGGGCCTCTTaGGCTCGGCCCCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSGGWAS*ARPHSW
Trigger: CCAAGAATGGGGCCGAGCCCAAGAGGCCCAGCCGCC...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAATCAGTGCCCGCGAGTaGTCTGGGTTCCGGATACCC +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEISARE*SGFRIP
Trigger: GGGTATCCGGAACCCAGACCACTCGCGGGCACTGAT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGATGTCGGCTCCCAGTaGGAAGGCAGGTGGGTACTC +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEDVGSQ*EGRWVL
Trigger: GAGTACCCACCTGCCTTCCCACTGGGAGCCGACATC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAACAGCGTTGGGGGAATaGGAGCTAGAGGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAETALGE*ELEDQG
Trigger: CCCCTGGTCCTCTAGCTCCCATTCCCCCAACGCTGT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393045.7
CDS-3UTR TCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTCAGTCAATTTCTCCTTaGTCAGTGCCCGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPQSISP*SVPASG
Trigger: ACCACTCGCGGGCACTGATCAAGGAGAAATTGACTG...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGTCCCTAGCGGGCACATaGGTGACACCCGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPESLAGT*VTPGDL
Trigger: CAAGTCTCCGGGTGTCACTCATGTGCCCGCTAGGGA...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGAGTGGGCCCAGAAAGTaGGAAGGGGTCCCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPESGPRK*EGVPRY
Trigger: GTACCGAGGGACCCCTTCTCACTTTCTGGGCCCACT...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGGGGGTTCAAGAGAGGTaGCCCTTCCCCAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEGVQER*PFPKRL
Trigger: GAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACCCC...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAATGGTGTTGGGAACAGTaGCTGAGAGTCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEWCWEQ*LRVEPG
Trigger: CCCTGGCTCGACTCTCAGCCACTGTTCCCAACACCA...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGTGCCCGCGAGTGGTCTaGGTTCCGGATACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAECPRVV*VPDTLC
Trigger: GCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCA...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGATCAGTGCCCGCGAGTaGTCTGGGTTCCGGATACCC +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEISARE*SGFRIP
Trigger: GGGTATCCGGAACCCAGACCACTCGCGGGCACTGAT...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGTGGACTGGGCTGTACTaGAGGCCATCCAGCCCATAC +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQWTGLY*RPSSPY
Trigger: GTATGGGCTGGATGGCCTCCAGTACAGCCCAGTCCA...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAAGCACCGAGGATGGCTaGTGGCCAGATGTCAGGACT +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAESTEDG*WPDVRT
Trigger: AGTCCTGACATCTGGCCACCAGCCATCCTCGGTGCT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGGGTGGTGGGCCGGATaGGCTCCCCATAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGGWWAG*APHRLH
Trigger: ATGAAGTCTATGGGGAGCTCATCCGGCCCACCACCC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGTTGGGAACAGTGGCTaGGAGTCGAGCCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGVGNSG*ESSQGC
Trigger: ACACCCCTGGCTCGACTCTCAGCCACTGTTCCCAAC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGGATGGCAGCTGAGGTaGCAGAACAGTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQGWQLR*QNSASW
Trigger: CCAAGAAGCACTGTTCTGTCACCTCAGCTGCCATCC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTAGTGGGCCCAGAAAGTaGGAAGGGGTCCCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGSGPRK*EGVPRY
Trigger: GTACCGAGGGACCCCTTCTCACTTTCTGGGCCCACT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTAGTCAAAGAGGGACCTaGGGGCAGGGGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGSQRGT*GQGSSM
Trigger: CATGGAGGACCCCTGCCCTCAGGTCCCTCTTTGACT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGCTCAGTCCAGGGAAATaGTGTCTGACCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQLSPGK*CLTDSQ
Trigger: CTGGCTGTCGGTCAGACATCATTTCCCTGGACTGAG...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAATTGGCCAGGAGCTCGTaGTTCCGTCCACTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAELARSS*FRPLLF
Trigger: GAACAAGAGTGGACGGAAGCACGAGCTCCTGGCCAA...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGCTGGCTAGAAGTGGATaGAAGGGTGGTGGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAELARSG*KGGGPD
Trigger: ATCCGGCCCACCACCCTTGCATCCACTTCTAGCCAG...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTGGGGCAAACCTCAGATaGCTCCTTCTTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPGANLR*LLLGFH
Trigger: ATGAAACCCAAGAAGGAGGCATCTGAGGTTTGCCCC...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGAGGTGCAGAGCCTTaGCCAGGAGCTCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSGGAEP*PGARAS
Trigger: GGAAGCACGAGCTCCTGGCCAAGGCTCTGCACCTCC...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCTCGGCCCCATTCTTaGTTGGGGGAAGGTAACCCG +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGARPHS*LGEGNP
Trigger: CGGGTTACCTTCCCCCAACCAAGAATGGGGCCGAGC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGTGGTGTTGGGAACAGTaGCTGAGAGTCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEWCWEQ*LRVEPG
Trigger: CCCTGGCTCGACTCTCAGCCACTGTTCCCAACACCA...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTTGCCCGCGAGTGGTCTaGGTTCCGGATACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGCPRVV*VPDTLC
Trigger: GCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCA...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGCCTCCTCTGTCATACTaGAGTAGGAGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQPPLSY*SRRQGK
Trigger: CTTCCCCTGCCTCCTACTCCAGTATGACAGAGGAGG...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATCCAGCTCCGCCATCTTaGGACATCGCAGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHPAPPS*DIAGAP
Trigger: TGGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGG...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGCAGTCAATTTCTCCTTaGTCAGTGCCCGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQQSISP*SVPASG
Trigger: ACCACTCGCGGGCACTGATCAAGGAGAAATTGACTG...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAACTAACTACAGGGCCATaGGCCTCTAGAAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAELTTGP*ASRSLG
Trigger: CCCTAAGCTTCTAGAGGCTCATGGCCCTGTAGTTAG...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAGGCCTTGGCGAGCCTaGAAAAGAAGATTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQRPWRA*KRRLGR
Trigger: CCTTCCCAATCTTCTTTTTCAGGCTCGCCAAGGCCT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGCAATGGTTTCATGGTaGCATCAGGGTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEAMVSW*HQGAQA
Trigger: AGCCTGTGCACCCTGATGTCACCATGAAACCATTGC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAAGAATCTGCTGCACTTaGTGGGGTGTGAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAERICCT*WGVRAK
Trigger: CTTTGCCCTCACACCCCAGCAAGTGCAGCAGATTCT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGTTCCTGCAGTCAACTaGCTCACCAGGTACACAGAC +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQVPAVN*LTRYTD
Trigger: GTCTGTGTACCTGGTGAGGCAGTTGACTGCAGGAAC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGAGGTGACAGAACAGTaGTTCTTGGTAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQEVTEQ*FLVGGR
Trigger: TCTGCCCCCTACCAAGAAGCACTGTTCTGTCACCTC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGATGTCAGGACTCCTTTaGTTCCAGGTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEMSGLL*FQVGPG
Trigger: TCCCGGCCCTACCTGGAAGCAAAGGAGTCCTGACAT...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAAAGCCAAGAAGCACCTaGAGCTCAGACACCCGGAAA +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEKPRST*SSDTRK
Trigger: TTTCCGGGTGTCTGAGCTCCAGGTGCTTCTTGGCTT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGCAGATGCCTCCTTCTTaGGTTTCATTGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQQMPPS*VSLGTR
Trigger: CCTGGTGCCCAATGAAACCCAAGAAGGAGGCATCTG...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAGGAGTGGCGCTGCAGTaGGAGCTCCCCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLGVALQ*ELPSVG
Trigger: CCCCACGCTGGGGAGCTCCCACTGCAGCGCCACTCC...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAACCGTCCGAACTCAGATaGCCAATTGACCACAATGGT +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEPSELR*PIDHNG
Trigger: ACCATTGTGGTCAATTGGTCATCTGAGTTCGGACGG...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGCCGTCCGAACTCAGATaGCCAATTGACCACAATGGT +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQPSELR*PIDHNG
Trigger: ACCATTGTGGTCAATTGGTCATCTGAGTTCGGACGG...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGCAGGGAAATGATGTCTaGCCGACAGCCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQQGNDV*PTASQR
Trigger: TCTTTGACTGGCTGTCGGTCAGACATCATTTCCCTG...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGCTAACTACAGGGCCATaGGCCTCTAGAAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAELTTGP*ASRSLG
Trigger: CCCTAAGCTTCTAGAGGCTCATGGCCCTGTAGTTAG...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGTGGAAAGGTGCAGAATaGGCCAGGCCTAACTACAGG +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEWKGAE*ARPNYR
Trigger: CCTGTAGTTAGGCCTGGCTCATTCTGCACCTTTCCA...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGAGGGCAAAGGTAAAGTaGGCTTCCTCAAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAERAKVK*ASSNRW
Trigger: CCAGCGGTTTGAGGAAGCGCACTTTACCTTTGCCCT...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGATGTAAGAATCTGCTaGACTTGCTGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQDVRIC*TCWGVR
Trigger: CCTCACACCCCAGCAAGTGCAGCAGATTCTTACATC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAACTGGATGTAAGAATCTaGTGCACTTGCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAELDVRI*CTCWGV
Trigger: CACACCCCAGCAAGTGCAGCAGATTCTTACATCCAG...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGTTTCTCCTTGATCAGTaGCCGCGAGTGGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEFLLDQ*PRVVWV
Trigger: AACCCAGACCACTCGCGGGCACTGATCAAGGAGAAA...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATGCAGCATCGAAGCTCTaGAGGTGGGCGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHAASKL*RWAQVR
Trigger: CCTCACCTGCGCCCACCTGCAGAGCTTCGATGCTGC...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAGGGGCAAACCTCAGATaGCTCCTTCTTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEGANLR*LLLGFH
Trigger: ATGAAACCCAAGAAGGAGGCATCTGAGGTTTGCCCC...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGACTCCACAGCATACTTaGTCAGTGTTGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAETPQHT*SVLGDS
Trigger: GCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGT...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGAAGCCAAGAAGCACCTaGAGCTCAGACACCCGGAAA +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEKPRST*SSDTRK
Trigger: TTTCCGGGTGTCTGAGCTCCAGGTGCTTCTTGGCTT...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGGCTTCCTCAAACCGCTaGCTAGAAGTGGATGCAAGG +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEASSNR*LEVDAR
Trigger: CCTTGCATCCACTTCTAGCCAGCGGTTTGAGGAAGC...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGGCTTCCTCAAACCGCTaGCTAGAAGTGGATGCAAGG +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEASSNR*LEVDAR
Trigger: CCTTGCATCCACTTCTAGCCAGCGGTTTGAGGAAGC...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTAATAAATCTAAACCTTaGATGTCGGCTCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPNKSKP*MSAPSG
Trigger: CCCACTGGGAGCCGACATCCAAGGTTTAGATTTATT...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGCGGTACTGGAAGAAGTaGCCAAGGGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPERYWKK*PRASCS
Trigger: TGAACAGGATGCCCTTGGCCACTTCTTCCAGTACCG...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGGACCCCTGCAGATCATaGCTAAGGCCTTACATCCTC +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEDPCRS*LRPYIL
Trigger: GAGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTC...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTACCAGCTCCGCCATCTTaGGACATCGCAGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLPAPPS*DIAGAP
Trigger: TGGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGG...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATGGGTGGTGGGCCGGATaGGCTCCCCATAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHGWWAG*APHRLH
Trigger: ATGAAGTCTATGGGGAGCTCATCCGGCCCACCACCC...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGATGGCAGCTGAGGTaGCAGAACAGTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSGWQLR*QNSASW
Trigger: CCAAGAAGCACTGTTCTGTCACCTCAGCTGCCATCC...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATGGCCGGGATGGCAGCTaGGGTGACAGAACAGTGCTT +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHGRDGS*GDRTVL
Trigger: AAGCACTGTTCTGTCACCTCAGCTGCCATCCCGGCC...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTAGGCCTTGGCGAGCCTaGAAAAGAAGATTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGRPWRA*KRRLGR
Trigger: CCTTCCCAATCTTCTTTTTCAGGCTCGCCAAGGCCT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGCGCCGGAGTGGCGCTaGAGTGGGAGCTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRAPEWR*SGSSPA
Trigger: CGCTGGGGAGCTCCCACTGCAGCGCCACTCCGGCGC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAACATACCATCCCATTTaGCTCCCACTGCCTAGGTTA +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAETYHPI*LPLPRL
Trigger: TAACCTAGGCAGTGGGAGGCAAATGGGATGGTATGT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGTCTTTGATCTTCATCTaGACACTAGGGGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQSLIFI*TLGAQL
Trigger: CAGCTGTGCCCCTAGTGTCCAGATGAAGATCAAAGA...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGATCACATTTGGCTCCTaGCAGAACCTCTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQITFGS*QNLSGC
Trigger: ACATCCAGAGAGGTTCTGCCAGGAGCCAAATGTGAT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTTGGAAAGGTGCAGAATaGGCCAGGCCTAACTACAGG +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSWKGAE*ARPNYR
Trigger: CCTGTAGTTAGGCCTGGCTCATTCTGCACCTTTCCA...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGATCACATTTGGCTCCTaGCAGAACCTCTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEITFGS*QNLSGC
Trigger: ACATCCAGAGAGGTTCTGCCAGGAGCCAAATGTGAT...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATTGGACTGGGCTGTACTaGAGGCCATCCAGCCCATAC +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHWTGLY*RPSSPY
Trigger: GTATGGGCTGGATGGCCTCCAGTACAGCCCAGTCCA...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTCATGTAGTGGGAGACTaGACAGGAAATCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSHVVGD*TGNPHP
Trigger: TGGGTGGGGATTTCCTGTCCAGTCTCCCACTACATG...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGGGAGCTCCCCAGCGTaGGGGCCAGTGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRGSSPA*GPVGPE
Trigger: TTCTGGGCCCACTGGCCCCCACGCTGGGGAGCTCCC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAAGTCAAAGAGGGACCTaGGGGCAGGGGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLSQRGT*GQGSSM
Trigger: CATGGAGGACCCCTGCCCTCAGGTCCCTCTTTGACT...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTAAAAGTAGGCATCTGTaGAGGTCTGTCTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSKSRHL*RSVWPL
Trigger: CAAGGGCCAGACAGACCTTCACAGATGCCTACTTTT...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGTTCTCTGTCCATCTCTaGAACTGCCTGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEFSVHL*NCLSQF
Trigger: AAACTGAGACAGGCAGTTTCAGAGATGGACAGAGAA...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAGGGGTTCAAGAGAGGTaGCCCTTCCCCAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLGVQER*PFPKRL
Trigger: GAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACCCC...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAGCTCGGCCCCATTCTTaGTTGGGGGAAGGTAACCCG +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLARPHS*LGEGNP
Trigger: CGGGTTACCTTCCCCCAACCAAGAATGGGGCCGAGC...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTCTTCTTGGGTTTCATTaGGCACCAGGATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGLLGFH*APGSIF
Trigger: GAAGATGGATCCTGGTGCCCAATGAAACCCAAGAAG...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAGGGATCAGAGTAGCTaGGGTTGGGACTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHRDQSS*GWDSTA
Trigger: TGCTGTGGAGTCCCAACCCCAGCTACTCTGATCCCT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
3UTR CAA 72 bp GATCAGAGTAGCTGGGGTTGGGACTCCACAGCATACTaGCTCAGTGTTGGGGGACAGCGAAGTTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: DQSSWGWDSTAY*LSVGGQRSFHN
Trigger: ATTATGGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGTCCCAACCCCAGCTACTCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTACTCAGATGACCAATTaGCCACAATGGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGTQMTN*PQWCWE
Trigger: TTCCCAACACCATTGTGGTCAATTGGTCATCTGAGT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAGGGCAAAGGTAAAGTaGGCTTCCTCAAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHRAKVK*ASSNRW
Trigger: CCAGCGGTTTGAGGAAGCGCACTTTACCTTTGCCCT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAGAATCTGCTGCACTTaGTGGGGTGTGAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHRICCT*WGVRAK
Trigger: CTTTGCCCTCACACCCCAGCAAGTGCAGCAGATTCT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTTGGTATAATCACATTTaGCTCCTGGCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGWYNHI*LLAEPL
Trigger: GAGAGGTTCTGCCAGGAGCCAAATGTGATTATACCA...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATCAGATGCCTCCTTCTTaGGTTTCATTGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHQMPPS*VSLGTR
Trigger: CCTGGTGCCCAATGAAACCCAAGAAGGAGGCATCTG...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAAGCACCGAGGATGGCTaGTGGCCAGATGTCAGGACT +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLSTEDG*WPDVRT
Trigger: AGTCCTGACATCTGGCCACCAGCCATCCTCGGTGCT...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGGTCTGTCTGGCCCTTaGCCAGAGCCCCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRGLSGP*PEPPEG
Trigger: TCCCTCTGGGGGCTCTGGCCAAGGGCCAGACAGACC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTACTCAGATGACCAATTaGCCACAATGGTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSTQMTN*PQWCWE
Trigger: TTCCCAACACCATTGTGGTCAATTGGTCATCTGAGT...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGGATCTCATCACAATCTaGACAGGAACTAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: GSREVPLPQEALDIVKAEDLITI*TGTKNL
Trigger: GAGATTCTTAGTTCCTGTTCAGATTGTGATGAGATC...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATCAGGGAAATGATGTCTaGCCGACAGCCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHQGNDV*PTASQR
Trigger: TCTTTGACTGGCTGTCGGTCAGACATCATTTCCCTG...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAAAAGTAGGCATCTGTaGAGGTCTGTCTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHKSRHL*RSVWPL
Trigger: CAAGGGCCAGACAGACCTTCACAGATGCCTACTTTT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGAAGAGACAATGGATGTaGAGAAGAAATAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEKRQWM*RRNRAM
Trigger: CATGGCTCTATTTCTTCTTCACATCCATTGTCTCTT...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAAAACCTTTATTATGGGTaGGAGCTTCACTACAACTTT +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAENLYYG*ELHYNF
Trigger: AAAGTTGTAGTGAAGCTCTCACCCATAATAAAGGTT...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAACCTTTATTATGGGTaGGAGCTTCACTACAACTTT +
Preference number: 4 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQNLYYG*ELHYNF
Trigger: AAAGTTGTAGTGAAGCTCTCACCCATAATAAAGGTT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATGATGTAAGAATCTGCTaGACTTGCTGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHDVRIC*TCWGVR
Trigger: CCTCACACCCCAGCAAGTGCAGCAGATTCTTACATC...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTTGGTATAATCACATTTaGCTCCTGGCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSWYNHI*LLAEPL
Trigger: GAGAGGTTCTGCCAGGAGCCAAATGTGATTATACCA...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAACCATCTTCCATGAATTaGATCTCATCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEPSSMN*ISSQSE
Trigger: TTCAGATTGTGATGAGATCCAATTCATGGAAGATGG...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTATAGAGCCATGGGTTTaGGTAATAAGAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGIEPWV*VIRRES
Trigger: GCTCTCTCTTCTTATTACCCAAACCCATGGCTCTAT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAATCACAACCTTTATTATaGGTGAGAGCTTCACTACAA +
Preference number: 4 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAESQPLL*VRASLQ
Trigger: TTGTAGTGAAGCTCTCACCCATAATAAAGGTTGTGA...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGGCCGGGATGGCAGCTaGGGTGACAGAACAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRGRDGS*GDRTVL
Trigger: AAGCACTGTTCTGTCACCTCAGCTGCCATCCCGGCC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAAGACATAGTCAAGGCTaGGGGTTCAGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLRHSQG*GFSPSP
Trigger: AGGAGAAGGGCTGAACCCTCAGCCTTGACTATGTCT...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAGTTCCTGCAGTCAACTaGCTCACCAGGTACACAGAC +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLVPAVN*LTRYTD
Trigger: GTCTGTGTACCTGGTGAGGCAGTTGACTGCAGGAAC...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTATTTCTCCTTGATCAGTaGCCGCGAGTGGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLFLLDQ*PRVVWV
Trigger: AACCCAGACCACTCGCGGGCACTGATCAAGGAGAAA...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTACATGTAGTGGGAGACTaGACAGGAAATCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLHVVGD*TGNPHP
Trigger: TGGGTGGGGATTTCCTGTCCAGTCTCCCACTACATG...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTACGGTACTGGAAGAAGTaGCCAAGGGCATCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLRYWKK*PRASCS
Trigger: TGAACAGGATGCCCTTGGCCACTTCTTCCAGTACCG...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTATAGAGCCATGGGTTTaGGTAATAAGAAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSIEPWV*VIRRES
Trigger: GCTCTCTCTTCTTATTACCCAAACCCATGGCTCTAT...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGTCACAACCTTTATTATaGGTGAGAGCTTCACTACAA +
Preference number: 4 (lower is better)
Translates to: EMRPKVGICEGLSGPWPESQPLL*VRASLQ
Trigger: TTGTAGTGAAGCTCTCACCCATAATAAAGGTTGTGA...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTACTGGATGTAAGAATCTaGTGCACTTGCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLLDVRI*CTCWGV
Trigger: CACACCCCAGCAAGTGCAGCAGATTCTTACATCCAG...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACTCAGTCCAGGGAAATaGTGTCTGACCGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRLSPGK*CLTDSQ
Trigger: CTGGCTGTCGGTCAGACATCATTTCCCTGGACTGAG...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAATGTCAGGACTCCTTTaGTTCCAGGTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRMSGLL*FQVGPG
Trigger: TCCCGGCCCTACCTGGAAGCAAAGGAGTCCTGACAT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTACTTCTTGGGTTTCATTaGGCACCAGGATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLLLGFH*APGSIF
Trigger: GAAGATGGATCCTGGTGCCCAATGAAACCCAAGAAG...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCTCCTCTGTCATACTaGAGTAGGAGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRPPLSY*SRRQGK
Trigger: CTTCCCCTGCCTCCTACTCCAGTATGACAGAGGAGG...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGCAATGGTTTCATGGTaGCATCAGGGTGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRAMVSW*HQGAQE
Trigger: CTCCTGTGCACCCTGATGTCACCATGAAACCATTGC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369298.5
CDS-3UTR TCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAAGACATAGTCAAGGCTaGGGGTTCAGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRRHSQG*GFSPSP
Trigger: AGGAGAAGGGCTGAACCCTCAGCCTTGACTATGTCT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAAGAGACAATGGATGTaGAGAAGAAATAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHKRQWM*RRNRAM
Trigger: CATGGCTCTATTTCTTCTTCACATCCATTGTCTCTT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGAGGTGACAGAACAGTaGTTCTTGGTAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNREVTEQ*FLVGGR
Trigger: TCTGCCCCCTACCAAGAAGCACTGTTCTGTCACCTC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGACCCCTGCAGATCATaGCTAAGGCCTTACATCCTC +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRDPCRS*LRPYIL
Trigger: GAGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATCCATCTTCCATGAATTaGATCTCATCACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHPSSMN*ISSQSE
Trigger: TTCAGATTGTGATGAGATCCAATTCATGGAAGATGG...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAAGGATCCATCTTCCATaGATTGGATCTCATCACAAT +
Preference number: 4 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLRIHLP*IGSHHN
Trigger: ATTGTGATGAGATCCAATTCATGGAAGATGGATCCT...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR GCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAACATACCATCCCATTTaGCTCCCACTGCCTAGGTTA +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRTYHPI*LPLPRL
Trigger: TAACCTAGGCAGTGGGAGGCAAATGGGATGGTATGT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGATTCTCTGTCCATCTCTaGAACTGCCTGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRFSVHL*NCLSQF
Trigger: AAACTGAGACAGGCAGTTTCAGAGATGGACAGAGAA...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAAATAAATCTAAACCTTaGATGTCGGCTCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRNKSKP*MSAPSG
Trigger: CCCACTGGGAGCCGACATCCAAGGTTTAGATTTATT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR TCA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAAGGATCCATCTTCCATaGATTGGATCTCATCACAAT +
Preference number: 4 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRRIHLP*IGSHHN
Trigger: ATTGTGATGAGATCCAATTCATGGAAGATGGATCCT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTCCCAGCTCCGCCATCTaGAGACATCGCAGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPPSSAI*RHRRRP
Trigger: GGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGGG...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS TCA 90 bp GGAAACTCATCACCATGTGCTTTAATTCGCCCAGCTCCGCCATCTTaGGACATCGCAGGCGCCCCAGCCGGAGCCGGAGCTCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GNSSPCALIRPAPPS*DIAGAPAGAGAQAQ
Trigger: CTGGGCCTGAGCTCCGGCTCCGGCTGGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGGGCGAATTAAAGCACATGGTGATGAGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000484423.5
CDS CCA 90 bp AGCAAGGCTGGAGGAAGCCCAGGAGTTGGTAAGGCCAGGAACAGATaGCTCTGGCTGAGAGGCTGCTGGGTGGAGCGTCTTTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SKAGGSPGVGKARNR*LWLRGCWVERLWGP
Trigger: TGGCCCCCAAAGACGCTCCACCCAGCAGCCTCTCAGCCAGAGCCATCTGTTCCTGGCCTTACCAACTCCTGGGCTTCCTCCAGCCTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS-3UTR CAA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGGGGCGGCTGGGCCTCTaGGGCTCGGCCCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEGRLGL*GSAPFL
Trigger: CAAGAATGGGGCCGAGCCCAAGAGGCCCAGCCGCCC...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGCCCAGCTCCGCCATCTaGAGACATCGCAGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: GSREVPLPQEALDIVKAEPSSAI*RHRRRP
Trigger: GGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGGG...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS CCA 90 bp GGTGGTGGGCCGGATGAGCTCCCCATAGACTTCATAGAAGGGCAATaGTTTCATGGTGACATCAGGGTGCACAGGCTGGGGCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GGGPDELPIDFIEGQ*FHGDIRVHRLGQRG
Trigger: CCCCCTCTGCCCCAGCCTGTGCACCCTGATGTCACCATGAAACCATTGCCCTTCTATGAAGTCTATGGGGAGCTCATCCGGCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000484423.5
ENST00000498436.2
CDS-3UTR CAA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAACAGGGGCCAACAGCGTaGGGGGAATGGGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAEQGPTA*GEWELE
Trigger: CTCTAGCTCCCATTCCCCCAACGCTGTTGGCCCCTG...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393045.7
CDS CCA 90 bp AGGAACAGATGGCTCTGGCTGAGAGGCTGCTGGGTGGAGCGTCTTTaGGGGCCAGTGGGACGTCACATGGAAGTGGTCTGGGATATGGAT +
Preference number: 5 (lower is better)
Translates to: RNRWLWLRGCWVERL*GPVGRHMEVVWDMD
Trigger: ATCCATATCCCAGACCACTTCCATGTGACGTCCCACTGGCCCCCAAAGACGCTCCACCCAGCAGCCTCTCAGCCAGAGCCATCTGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS-3UTR CAA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGGATGTCAGGACTCCTTaGCTTCCAGGTAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQDVRTP*LPGRAG
Trigger: CCCGGCCCTACCTGGAAGCAAAGGAGTCCTGACATC...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTATGTCCACCTCACGCTaGGGGCCCAGCAGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGMSTSR*GPSRVP
Trigger: TGGCACCCTGCTGGGCCCCAAGCGTGAGGTGGACAT...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393045.7
CDS CCA 90 bp GGTGGTGGGCCGGATGAGCTCCCCATAGACTTCATAGAAGGGCAATaGTTTCATGGTGACATCAGGGTGCACAGGAGGAGAGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGGPDELPIDFIEGQ*FHGDIRVHRRRGAR
Trigger: CCTGGCACCTCTCCTCCTGTGCACCCTGATGTCACCATGAAACCATTGCCCTTCTATGAAGTCTATGGGGAGCTCATCCGGCCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369298.5
CDS-3UTR CAA 90 bp AGGCCGGGCCTGACTCCCAGACCCCTGCAGATCATGGCTAAGGCCTTACATCCTCATACTTGCTCAGTGTaGGGGGACAGCGAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RPGLTPRPLQIMAKALHPHTCSV*GDSEVS
Trigger: GGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATG...AGGATGTAAGGCCTTAGCCATGATCTGCAGGGGTCTGGGAGTCAGGCCCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGACAGAACAGTGCTTCTaGGTAGGGGGCAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQTEQCF*VGGRSS
Trigger: GGAGGATCTGCCCCCTACCAAGAAGCACTGTTCTGT...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GAAAAAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGATGTCAGGACTCCTTaGCTTCCAGGTAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: EKEDWEGGHRVLPPPWKGDVRTP*LPGRAG
Trigger: CCCGGCCCTACCTGGAAGCAAAGGAGTCCTGACATC...ACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS TCA 90 bp CACTCAGTGCCCGCGAGTGGTCTGGGTTCCGGATACCCTTTGCTCTaGGTTTTTGTAGAAGGGTTCCTGCAGTCAACTGCCTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: HSVPASGLGSGYPLL*VFVEGFLQSTASPG
Trigger: ACCTGGTGAGGCAGTTGACTGCAGGAACCCTTCTACAAAAACTCAGAGCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCACTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000475261.1
CDS CCA 90 bp GCTCCTGGCAGAACCTCTCTGGATGTAAGAATCTGCTGCACTTGCTaGGGTGTGAGGGCAAAGGTAAAGTGCGCTTCCTCAAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: APGRTSLDVRICCTC*GVRAKVKCASSNRW
Trigger: CCAGCGGTTTGAGGAAGCGCACTTTACCTTTGCCCTCACACCCCAGCAAGTGCAGCAGATTCTTACATCCAGAGAGGTTCTGCCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000484423.5
ENST00000498436.2
CDS-3UTR CAA 90 bp AGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACCCCAGTGTCCTTAGGGCGGCTGGGCCTCTaGGGCTCGGCCCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: RNVPPSKEHFQKQTPVSLGRLGL*GSAPFL
Trigger: CAAGAATGGGGCCGAGCCCAAGAGGCCCAGCCGCCC...TAAGGACACTGGGGTCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGAATCAGATGCCTCCTTCTaGGGTTTCATTGGGCACCAG +
Preference number: 5 (lower is better)
Translates to: EDWEGGHRVLPPPWKGAESDASF*GFIGHQ
Trigger: CTGGTGCCCAATGAAACCCAAGAAGGAGGCATCTGA...TTCTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp TGGCCTTGTCAGGCAGAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTCTTTGGGTGCTGGCCTaGTCAGGCAGAGATGAGGCC +
Preference number: 5 (lower is better)
Translates to: WPCQAEMRPKVGICEGLSLWVLA*SGRDEA
Trigger: GGCCTCATCTCTGCCTGACAAGGCCAGCACCCAAAG...AGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTCTGCCTGACAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS TCA 90 bp AGTGGCCACCTCACTGTCAGGGTCAGCAGTCAATTTCTCCTTGACTaGAACAAAAGTGAGGCCAGAGCCATGGGGTCAGCAAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGHLTVRVSSQFLLD*NKSEARAMGSARLE
Trigger: CTCCAGCCTTGCTGACCCCATGGCTCTGGCCTCACTTTTGTTTCAGTCAAGGAGAAATTGACTGCTGACCCTGACAGTGAGGTGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS GCA 90 bp TTGGCTCCTGGCAGAACCTCTCTGGATGTAAGAATCTGCTGCACTTaGTGGGGTGTGAGGGCAAAGGTAAAGTGCGCTTCCTCAAACCGC +
Preference number: 5 (lower is better)
Translates to: LAPGRTSLDVRICCT*WGVRAKVKCASSNR
Trigger: GCGGTTTGAGGAAGCGCACTTTACCTTTGCCCTCACACCCCAGCAAGTGCAGCAGATTCTTACATCCAGAGAGGTTCTGCCAGGAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000484423.5
ENST00000498436.2
CDS GCA 90 bp CCCAGAGGGATCAGAGTAGCTGGGGTTGGGACTCCACAGCATACTTaGTCAGTGTTGGGGGACAGCGAAGTTTCCATAATCCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: PRGIRVAGVGTPQHT*SVLGDSEVSIIQGT
Trigger: AGTTCCCTGGATTATGGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGTCCCAACCCCAGCTACTCTGATCCCTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000472114.5
ENST00000475261.1
CDS-3UTR CAA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGTCAGATGCCTCCTTCTaGGGTTTCATTGGGCACCAG +
Preference number: 5 (lower is better)
Translates to: EMRPKVGICEGLSGPWPESDASF*GFIGHQ
Trigger: CTGGTGCCCAATGAAACCCAAGAAGGAGGCATCTGA...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGCCTTCTTGGGTTTCATaGGGCACCAGGATCCATCTT +
Preference number: 5 (lower is better)
Translates to: EMRPKVGICEGLSGPWPEPSWVS*GTRIHL
Trigger: AAGATGGATCCTGGTGCCCAATGAAACCCAAGAAGG...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp AAGAAGATTGGGAAGGAGGGCACAGGGTCCTTCCACCTCCCTGGAAAGGTGCAGTTTCCACCTGTCTGTTaGGCCGAAGGGAATGGAATA +
Preference number: 5 (lower is better)
Translates to: KKIGKEGTGSFHLPGKVQFPPVC*AEGNGI
Trigger: TATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAA...CTGCACCTTTCCAGGGAGGTGGAAGGACCCTGTGCCCTCCTTCCCAATCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS TCA 90 bp AAAGGTAAAGTGCGCTTCCTCAAACCGCTGGCTAGAAGTGGATGCTaGGGATACAAAGGGGCAGTTATTCCAAGCCCATGCACAGGCAGC +
Preference number: 5 (lower is better)
Translates to: KGKVRFLKPLARSGC*GYKGAVIPSPCTGS
Trigger: GCTGCCTGTGCATGGGCTTGGAATAACTGCCCCTTTGTATCCTCAGCATCCACTTCTAGCCAGCGGTTTGAGGAAGCGCACTTTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484423.5
ENST00000498436.2
CDS GCA 90 bp AATCCAGATCAGGTGGGGAAGAGAGGAAAGATGTTACTCACTCAGTaGCCGCGAGTGGTCTGGGTTCCGGATACCCTTTGCTCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: NPDQVGKRGKMLLTQ*PRVVWVPDTLCSEF
Trigger: AAACTCAGAGCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCACTGAGTGAGTAACATCTTTCCTCTCTTCCCCACCTGATCTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000475261.1
CDS CCA 90 bp AGGTGGGGAAGAGAGGAAAGATGTTACTCACTCAGTGCCCGCGAGTaGTCTGGGTTCCGGATACCCTTTGCTCTGAGTTTTTGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RWGREERCYSLSARE*SGFRIPFALSFCRR
Trigger: CCTTCTACAAAAACTCAGAGCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCACTGAGTGAGTAACATCTTTCCTCTCTTCCCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000475261.1
CDS CCA 90 bp TGCTGGGGTGTGAGGGCAAAGGTAAAGTGCGCTTCCTCAAACCGCTaGCTAGAAGTGGATGCTGAGGATACAAAGGGGCAGTTATTCCAA +
Preference number: 5 (lower is better)
Translates to: CWGVRAKVKCASSNR*LEVDAEDTKGQLFQ
Trigger: TTGGAATAACTGCCCCTTTGTATCCTCAGCATCCACTTCTAGCCAGCGGTTTGAGGAAGCGCACTTTACCTTTGCCCTCACACCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484423.5
ENST00000498436.2
CDS-3UTR CAA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGTTTCCACCTGTCTGTTaGGCCGAAGGGAATGGAATA +
Preference number: 5 (lower is better)
Translates to: GSREVPLPQEALDIVKAEFPPVC*AEGNGI
Trigger: TATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAA...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS GCA 90 bp ATCTCAATCCCGACTTCCCCACCTCCCAGTCACTCATCTCAGAAATaGCGTATGAGAGCAATCAACCCCTGTGGATCCGAAGGTATTCTC +
Preference number: 5 (lower is better)
Translates to: ISIPTSPPPSHSSQK*RMRAINPCGSEGIL
Trigger: GAGAATACCTTCGGATCCACAGGGGTTGATTGCTCTCATACGGCATTTCTGAGATGAGTGACTGGGAGGTGGGGAAGTCGGGATTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS CCA 90 bp CAGTCACTCATCTCAGAAATGCCGTATGAGAGCAATCAACCCCTGTaGATCCGAAGGTATTCTCTTGAGAAGCAGGAGAGCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QSLISEMPYESNQPL*IRRYSLEKQESLSL
Trigger: GAGGGAGAGGCTCTCCTGCTTCTCAAGAGAATACCTTCGGATCCACAGGGGTTGATTGCTCTCATACGGCATTTCTGAGATGAGTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS-3UTR CAA 90 bp GGTTCAAGAGAGGTGCCCCTTCCCCAAGAGGCTCTAGACATAGTCAAGGCTGAGAACTCAGATGACCAATaGACCACAATGGTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: GSREVPLPQEALDIVKAENSDDQ*TTMVLG
Trigger: TCCCAACACCATTGTGGTCAATTGGTCATCTGAGTT...CTCAGCCTTGACTATGTCTAGAGCCTCTTGGGGAAGGGGCACCTCTCTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GAGATGAGGCCAAAAGTAGGCATCTGTGAAGGTCTGTCTGGCCCTTGGCCAGAGTTAAATATTAACCCTTaGGGTGCTGGCCTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: EMRPKVGICEGLSGPWPELNINP*GAGLVR
Trigger: CCTGACAAGGCCAGCACCCAAAGGGTTAATATTTAA...CTCTGGCCAAGGGCCAGACAGACCTTCACAGATGCCTACTTTTGGCCTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS TCA 90 bp CTAGCAGGGCTGGAGTTAGGGACTGTGAGGTGCAAAGCAGATACATaGTTGGAAATTCAAGGGTGCCTGGGAGTGGTCCAACTTCAACTA +
Preference number: 5 (lower is better)
Translates to: LAGLELGTVRCKADT*LEIQGCLGVVQLQL
Trigger: TAGTTGAAGTTGGACCACTCCCAGGCACCCTTGAATTTCCAATCATGTATCTGCTTTGCACCTCACAGTCCCTAACTCCAGCCCTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS CCA 90 bp CGTCACATGGAAGTGGTCTGGGATATGGATGATGAAGGCTGGGTGTaGGGGATTTTCCCATCCCTGAAGATGCTTAAACATAGCGTGACA +
Preference number: 5 (lower is better)
Translates to: RHMEVVWDMDDEGWV*GIFPSLKMLKHSVT
Trigger: TGTCACGCTATGTTTAAGCATCTTCAGGGATGGGAAAATCCCCCACACCCAGCCTTCATCATCCATATCCCAGACCACTTCCATGTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS-3UTR CAA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATGGGCACAGTTTCCCATaGACCTTGACAAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHGHSFP*TLTKRL
Trigger: CAACCTCTTTGTCAAGGTCAATGGGAAACTGTGCCC...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACGGCCCCATTCTTGGTaGGGGGAAGGTAACCCGGCA +
Preference number: 5 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRRPHSW*GEGNPA
Trigger: TGCCGGGTTACCTTCCCCCAACCAAGAATGGGGCCG...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGACTTTGGGTGCTGGCCTaGTCAGGCAGAGATGAGGCC +
Preference number: 5 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRLWVLA*SGRDEA
Trigger: GGCCTCATCTCTGCCTGACAAGGCCAGCACCCAAAG...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAACAGAACAGTGCTTCTaGGTAGGGGGCAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRTEQCF*VGGRSS
Trigger: GGAGGATCTGCCCCCTACCAAGAAGCACTGTTCTGT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GCCTGTCTCAGTTTTTCCACCTGTCTGTTTGGCCGAAGGGAATGGAATAGACATAATAGAGCCATGGGTTaGGGTAATAAGAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: ACLSFSTCLFGRREWNRHNRAMG*GNKKRE
Trigger: CTCTCTCTTCTTATTACCCAAACCCATGGCTCTATT...ATGTCTATTCCATTCCCTTCGGCCAAACAGACAGGTGGAAAAACTGAGACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAGGGCACAGTTTCCCATaGACCTTGACAAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRGHSFP*TLTKRL
Trigger: CAACCTCTTTGTCAAGGTCAATGGGAAACTGTGCCC...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS CCA 90 bp TCCTTCTTGGGTTTCATTGGGCACCAGGATCCATCTTCCATGAATTaGATCTCATCACAATCTGAACAGGAACTAAGAATCTCCATAAAT +
Preference number: 5 (lower is better)
Translates to: SFLGFIGHQDPSSMN*ISSQSEQELRISIN
Trigger: ATTTATGGAGATTCTTAGTTCCTGTTCAGATTGTGATGAGATCCAATTCATGGAAGATGGATCCTGGTGCCCAATGAAACCCAAGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000472114.5
ENST00000475261.1
CDS-3UTR CAA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAAACTCAGATGACCAATaGACCACAATGGTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRNSDDQ*TTMVLG
Trigger: TCCCAACACCATTGTGGTCAATTGGTCATCTGAGTT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS-3UTR CAA 90 bp GTTAACATACCCAAAGGAATGTGCCACCATCTAAAGAACATTTCCAGAAACAGAAATAGAGCCATGGGTTaGGGTAATAAGAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VNIPKGMCHHLKNISRNRNRAMG*GNKKRE
Trigger: CTCTCTCTTCTTATTACCCAAACCCATGGCTCTATT...TCTGTTTCTGGAAATGTTCTTTAGATGGTGGCACATTCCTTTGGGTATGTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS CCA 72 bp TGGCTCTGGCTGAGAGGCTGCTGGGTGGAGCGTCTTTaGGGGCCAGTGGGACGTCACATGGAAGTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: WLWLRGCWVERL*GPVGRHMEVVW
Trigger: CCAGACCACTTCCATGTGACGTCCCACTGGCCCCCAAAGACGCTCCACCCAGCAGCCTCTCAGCCAGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS CAA 90 bp CGGAAACTCATCACCATGTGCTTTAATTCGCCCAGCTCCGCCATCTaGAGACATCGCAGGCGCCCCAGCCGGAGCCGGAGCTCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RKLITMCFNSPSSAI*RHRRRPSRSRSSGP
Trigger: TGGGCCTGAGCTCCGGCTCCGGCTGGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGGGCGAATTAAAGCACATGGTGATGAGTTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000484423.5
CDS TCA 72 bp TCACCATGTGCTTTAATTCGCCCAGCTCCGCCATCTTaGGACATCGCAGGCGCCCCAGCCGGAGCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: SPCALIRPAPPS*DIAGAPAGAGA
Trigger: AGCTCCGGCTCCGGCTGGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGGGCGAATTAAAGCACATGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000484423.5
ENST00000498436.2
CDS CAA 72 bp ATCACCATGTGCTTTAATTCGCCCAGCTCCGCCATCTaGAGACATCGCAGGCGCCCCAGCCGGAGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: ITMCFNSPSSAI*RHRRRPSRSRS
Trigger: GCTCCGGCTCCGGCTGGGGCGCCTGCGATGTCTCAAGATGGCGGAGCTGGGCGAATTAAAGCACATGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000484423.5
ENST00000498436.2
CDS GCA 72 bp ATCTGGACACTAGGGGCACAGCTGGACTTCAGGAGGTaGAGAGCCTTGGCCAGGAGCTCGTGCTTCCGTCCA +
Preference number: 6 (lower is better)
Translates to: IWTLGAQLDFRR*RALARSSCFRP
Trigger: TGGACGGAAGCACGAGCTCCTGGCCAAGGCTCTGCACCTCCTGAAGTCCAGCTGTGCCCCTAGTGTCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000463514.2
ENST00000484423.5
ENST00000498436.2
CDS CCA 72 bp GTGCCCATAGCAGGGCTCCTTAGCACCGAGGATGGCTaGTGGCCAGATGTCAGGACTCCTTTGCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: VPIAGLLSTEDG*WPDVRTPLLPG
Trigger: ACCTGGAAGCAAAGGAGTCCTGACATCTGGCCACCAGCCATCCTCGGTGCTAAGGAGCCCTGCTATGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000472114.5
ENST00000475261.1
CDS CCA 72 bp GGGTGGAGCGTCTTTGGGGGCCAGTGGGACGTCACATaGAAGTGGTCTGGGATATGGATGATGAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GWSVFGGQWDVT*KWSGIWMMKAG
Trigger: CCCAGCCTTCATCATCCATATCCCAGACCACTTCCATGTGACGTCCCACTGGCCCCCAAAGACGCTCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS CCA 72 bp GTGAGGGCAAAGGTAAAGTGCGCTTCCTCAAACCGCTaGCTAGAAGTGGATGCAAGGGTGGTGGGCCGGATG +
Preference number: 6 (lower is better)
Translates to: VRAKVKCASSNR*LEVDARVVGRM
Trigger: CATCCGGCCCACCACCCTTGCATCCACTTCTAGCCAGCGGTTTGAGGAAGCGCACTTTACCTTTGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
CDS GCA 72 bp CAGGTGGGGAAGAGAGGAAAGATGTTACTCACTCAGTaGCCGCGAGTGGTCTGGGTTCCGGATACCCTTTGC +
Preference number: 6 (lower is better)
Translates to: QVGKRGKMLLTQ*PRVVWVPDTLC
Trigger: GCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCACTGAGTGAGTAACATCTTTCCTCTCTTCCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000475261.1
CDS TCA 72 bp CCCCATAGACTTCATAGAAGGGCAATGGTTTCATGGTaGCATCAGGGTGCACAGGAGGAGAGGTGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: PHRLHRRAMVSW*HQGAQEERCQG
Trigger: CCCCTGGCACCTCTCCTCCTGTGCACCCTGATGTCACCATGAAACCATTGCCCTTCTATGAAGTCTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369298.5
CDS TCA 72 bp CCCGCGAGTGGTCTGGGTTCCGGATACCCTTTGCTCTaGGTTTTTGTAGAAGGGTTCCTGCAGTCAACTGCC +
Preference number: 6 (lower is better)
Translates to: PASGLGSGYPLL*VFVEGFLQSTA
Trigger: GGCAGTTGACTGCAGGAACCCTTCTACAAAAACTCAGAGCAAAGGGTATCCGGAACCCAGACCACTCGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000475261.1
CDS CCA 72 bp GGCCAGTGGGACGTCACATGGAAGTGGTCTGGGATATaGATGATGAAGGCTGGGTGTGGGGGATTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: GQWDVTWKWSGI*MMKAGCGGFSH
Trigger: ATGGGAAAATCCCCCACACCCAGCCTTCATCATCCATATCCCAGACCACTTCCATGTGACGTCCCACTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS TCA 72 bp GTGCGCTTCCTCAAACCGCTGGCTAGAAGTGGATGCTaGGGATACAAAGGGGCAGTTATTCCAAGCCCATGC +
Preference number: 6 (lower is better)
Translates to: VRFLKPLARSGC*GYKGAVIPSPC
Trigger: GCATGGGCTTGGAATAACTGCCCCTTTGTATCCTCAGCATCCACTTCTAGCCAGCGGTTTGAGGAAGCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484423.5
ENST00000498436.2
CDS GCA 72 bp CCGACTTCCCCACCTCCCAGTCACTCATCTCAGAAATaGCGTATGAGAGCAATCAACCCCTGTGGATCCGAA +
Preference number: 6 (lower is better)
Translates to: PTSPPPSHSSQK*RMRAINPCGSE
Trigger: TTCGGATCCACAGGGGTTGATTGCTCTCATACGGCATTTCTGAGATGAGTGACTGGGAGGTGGGGAAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS CCA 72 bp GTGAGGGCAAAGGTAAAGTGCGCTTCCTCAAACCGCTaGCTAGAAGTGGATGCTGAGGATACAAAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: VRAKVKCASSNR*LEVDAEDTKGQ
Trigger: CTGCCCCTTTGTATCCTCAGCATCCACTTCTAGCCAGCGGTTTGAGGAAGCGCACTTTACCTTTGCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484423.5
ENST00000498436.2
CDS CAA 90 bp ATCAGAGTAGCTGGGGTTGGGACTCCACAGCATACTTGCTCAGTGTaGGGGGACAGCGAAGTTTCCATAATCCAGGGAACTCAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: IRVAGVGTPQHTCSV*GDSEVSIIQGTQSR
Trigger: CCTGGACTGAGTTCCCTGGATTATGGAAACTTCGCTGTCCCCCAACACTGAGCAAGTATGCTGTGGAGTCCCAACCCCAGCTACTCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000472114.5
ENST00000475261.1
CDS TCA 72 bp ACCTGCTTTAGCTGTGCTCACCCGTCCGAACTCAGATaGCCAATTGACCACAATGGTGTTGGGAACAGTGGC +
Preference number: 6 (lower is better)
Translates to: TCFSCAHPSELR*PIDHNGVGNSG
Trigger: GCCACTGTTCCCAACACCATTGTGGTCAATTGGTCATCTGAGTTCGGACGGGTGAGCACAGCTAAAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000498436.2
CDS TCA 72 bp CCCCACCTCCCAGTCACTCATCTCAGAAATGCCGTATaGGAGCAATCAACCCCTGTGGATCCGAAGGTATTC +
Preference number: 6 (lower is better)
Translates to: PHLPVTHLRNAV*EQSTPVDPKVF
Trigger: GAATACCTTCGGATCCACAGGGGTTGATTGCTCTCATACGGCATTTCTGAGATGAGTGACTGGGAGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS GCA 72 bp TTGGCTCCTGGCAGAACCTCTCTGGATGTAAGAATCTaGTGCACTTGCTGGGGTGTGAGGGCAAAGGTAAAG +
Preference number: 6 (lower is better)
Translates to: LAPGRTSLDVRI*CTCWGVRAKVK
Trigger: CTTTACCTTTGCCCTCACACCCCAGCAAGTGCAGCAGATTCTTACATCCAGAGAGGTTCTGCCAGGAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000484423.5
ENST00000498436.2
CDS TCA 72 bp CTCACTGTCAGGGTCAGCAGTCAATTTCTCCTTGACTaGAACAAAAGTGAGGCCAGAGCCATGGGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: LTVRVSSQFLLD*NKSEARAMGSA
Trigger: TGCTGACCCCATGGCTCTGGCCTCACTTTTGTTTCAGTCAAGGAGAAATTGACTGCTGACCCTGACAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475261.1
CDS TCA 72 bp GGCCTAAGTAGGAATCTCAGGAACTACCAGTGGGGCTaGGGAGATAATAAGATACCTACACCCCACTGCCCT +
Preference number: 6 (lower is better)
Translates to: GLSRNLRNYQWG*GDNKIPTPHCP
Trigger: AGGGCAGTGGGGTGTAGGTATCTTATTATCTCCTCAGCCCCACTGGTAGTTCCTGAGATTCCTACTTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS CCA 72 bp AGAACCTCTCTGGATGTAAGAATCTGCTGCACTTGCTaGGGTGTGAGGGCAAAGGTAAAGTGCGCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: RTSLDVRICCTC*GVRAKVKCASS
Trigger: TGAGGAAGCGCACTTTACCTTTGCCCTCACACCCCAGCAAGTGCAGCAGATTCTTACATCCAGAGAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000484423.5
ENST00000498436.2
CDS CCA 72 bp TCAGCAGTCAATTTCTCCTTGATCAGTGCCCGCGAGTaGTCTGGGTTCCGGATACCCTTTGCTCTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: SAVNFSLISARE*SGFRIPFALSF
Trigger: AAAACTCAGAGCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCACTGATCAAGGAGAAATTGACTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369298.5
ENST00000393045.7
CDS CCA 72 bp GGGGCAAACCTCAGATGCCTCCTTCTTGGGTTTCATTaGGCACCAGGATCCATCTTCCATGAATTGGATCTC +
Preference number: 6 (lower is better)
Translates to: GANLRCLLLGFH*APGSIFHELDL
Trigger: GAGATCCAATTCATGGAAGATGGATCCTGGTGCCCAATGAAACCCAAGAAGGAGGCATCTGAGGTTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000472114.5
ENST00000475261.1
CDS CCA 72 bp AGAGAGGAAAGATGTTACTCACTCAGTGCCCGCGAGTaGTCTGGGTTCCGGATACCCTTTGCTCTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: REERCYSLSARE*SGFRIPFALSF
Trigger: AAAACTCAGAGCAAAGGGTATCCGGAACCCAGACCACTCGCGGGCACTGAGTGAGTAACATCTTTCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000475261.1
CDS TCA 72 bp GTACACAGACAAGGAGTAATTCCGTCCGAACTCAGATaGCCAATTGACCACAATGGTGTTGGGAACAGTGGC +
Preference number: 6 (lower is better)
Translates to: VHRQGVIPSELR*PIDHNGVGNSG
Trigger: GCCACTGTTCCCAACACCATTGTGGTCAATTGGTCATCTGAGTTCGGACGGAATTACTCCTTGTCTGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369298.5
ENST00000393045.7
ENST00000484423.5
CDS CCA 72 bp TGGTCTCACAGAGACAGAACCTTAGCTGCACCTGTATaGTATAATCACATTTGGCTCCTGGCAGAACCTCTC +
Preference number: 6 (lower is better)
Translates to: WSHRDRTLAAPV*YNHIWLLAEPL
Trigger: GAGAGGTTCTGCCAGGAGCCAAATGTGATTATACCATACAGGTGCAGCTAAGGTTCTGTCTCTGTGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369298.5
ENST00000369299.7
ENST00000393045.7
ENST00000393046.3
ENST00000484423.5
ENST00000498436.2
CDS CCA 72 bp ATCTCAGAAATGCCGTATGAGAGCAATCAACCCCTGTaGATCCGAAGGTATTCTCTTGAGAAGCAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: ISEMPYESNQPL*IRRYSLEKQES
Trigger: GCTCTCCTGCTTCTCAAGAGAATACCTTCGGATCCACAGGGGTTGATTGCTCTCATACGGCATTTCTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS CAA 72 bp ATTAGCCTCTGCTTCTCATACCACCACTGCCCACTTTaGTTCCATGAGGACCAGAGACAGACTCATAAAGAG +
Preference number: 6 (lower is better)
Translates to: ISLCFSYHHCPL*FHEDQRQTHKE
Trigger: CTCTTTATGAGTCTGTCTCTGGTCCTCATGGAACAAAAGTGGGCAGTGGTGGTATGAGAAGCAGAGGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369299.7
ENST00000475261.1
CDS TCA 72 bp TGTCTAGAAAGGAAGCTTCAGAGATCTGAGACCTTCTaGAGAAAGAACCACTTACCTGACTCTCTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: CLERKLQRSETF*RKNHLPDSLSE
Trigger: TTCAGACAGAGAGTCAGGTAAGTGGTTCTTTCTTCAGAAGGTCTCAGATCTCTGAAGCTTCCTTTCTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS CAA 90 bp TGTAAAATAAGAACATTATCCATCCTACTGGACCGCTCTGAGTTGTaGGAATCAAATAACACAAGGTATGTAAAAGAGCTTTGCAAAGTA +
Preference number: 6 (lower is better)
Translates to: CKIRTLSILLDRSEL*ESNNTRYVKELCKV
Trigger: TACTTTGCAAAGCTCTTTTACATACCTTGTGTTATTTGATTCCAACAACTCAGAGCGGTCCAGTAGGATGGATAATGTTCTTATTTTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472114.5
CDS CAA 90 bp ATCTGTAAAATAAGAACATTATCCATCCTACTGGACCGCTCTGAGTaGTTGGAATCAAATAACACAAGGTATGTAAAAGAGCTTTGCAAA +
Preference number: 6 (lower is better)
Translates to: ICKIRTLSILLDRSE*LESNNTRYVKELCK
Trigger: TTTGCAAAGCTCTTTTACATACCTTGTGTTATTTGATTCCAACAACTCAGAGCGGTCCAGTAGGATGGATAATGTTCTTATTTTACAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472114.5