RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIAS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078043

Ensembl transcript IDs: ENST00000324794.11, ENST00000398654.7, ENST00000545673.5, ENST00000585916.6, ENST00000586170.1, ENST00000586634.1, ENST00000586953.1, ENST00000587810.1, ENST00000589819.1, ENST00000589917.1, ENST00000590127.5, ENST00000590944.1, ENST00000592011.5, ENST00000592212.5, ENST00000592221.5

Found 594 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCCCGCTGTCCCCACATCAAGAGCAGTACATAGTCCAACGCTCTaGACAAAGCACACACTCGGGAATTGCTGCGCTAACAGGGTTATC +
Preference number: 1 (lower is better)
Translates to: VPAVPTSRAVHSPTL*TKHTLGNCCANRVI
Trigger: GATAACCCTGTTAGCGCAGCAATTCCCGAGTGTGTGCTTTGTGCAGAGCGTTGGACTATGTACTGCTCTTGATGTGGGGACAGCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR CCA 90 bp AGTTTGGGGATGGAATGCCTTTGGCTCAGTAGATTCTACTGGCTTTaGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGGAAGAGGAAA +
Preference number: 1 (lower is better)
Translates to: SLGMECLWLSRFYWL*GAQKGHNGAYRKRK
Trigger: TTTCCTCTTCCTGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGAGCCAAAGGCATTCCATCCCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp TTCAGGCCAGAAAATCCTCAAGTGGCTCACCTAATTGTCAGAAAGTaGGTGAGTGACAACAGACCTCAGGCACGAAACTATTTTCAGCAC +
Preference number: 1 (lower is better)
Translates to: FRPENPQVAHLIVRK*VSDNRPQARNYFQH
Trigger: GTGCTGAAAATAGTTTCGTGCCTGAGGTCTGTTGTCACTCACTCACTTTCTGACAATTAGGTGAGCCACTTGAGGATTTTCTGGCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp CTGATGAATGATTCCCAGAATCAAGTGAGTCCTCCTTTAGTCCAATaGGATGATGTCAGGAATGTTACTTCCACTGCTGGTTATGACCCC +
Preference number: 1 (lower is better)
Translates to: LMNDSQNQVSPPLVQ*DDVRNVTSTAGYDP
Trigger: GGGGTCATAACCAGCAGTGGAAGTAACATTCCTGACATCATCTCATTGGACTAAAGGAGGACTCACTTGATTCTGGGAATCATTCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR TCA 90 bp GGCAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTaGGGATTTCTTCAAGGCTGCAATAATGAAAGAACAGTCTGGACA +
Preference number: 1 (lower is better)
Translates to: GKGTMLRHVGGWIGY*GFLQGCNNERTVWT
Trigger: TGTCCAGACTGTTCTTTCATTATTGCAGCCTTGAAGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 90 bp AAGGCAGAGGGTCTTAGTGCAGATGCCTGCATAAAGATAAAACGTTaGATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCAT +
Preference number: 1 (lower is better)
Translates to: KAEGLSADACIKIKR*MFLENMARPPFPYH
Trigger: ATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTTTATCTTTATGCAGGCATCTGCACTAAGACCCTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 90 bp ATAGCACAGCTAATTAACGTCACTTCAGTTTACGCAGAGAGCTTTTaGGGTAAGTCTAGGTCAGACTCCCAAGTCCACTACTCATTCACT +
Preference number: 1 (lower is better)
Translates to: IAQLINVTSVYAESF*GKSRSDSQVHYSFT
Trigger: AGTGAATGAGTAGTGGACTTGGGAGTCTGACCTAGACTTACCCCAAAAGCTCTCTGCGTAAACTGAAGTGACGTTAATTAGCTGTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 90 bp CCGTTCCATAGAGTCAGAAAGGCAGAGGGTCTTAGTGCAGATGCCTaGATAAAGATAAAACGTTGCATGTTCTTGGAAAATATGGCTAGA +
Preference number: 1 (lower is better)
Translates to: PFHRVRKAEGLSADA*IKIKRCMFLENMAR
Trigger: TCTAGCCATATTTTCCAAGAACATGCAACGTTTTATCTTTATGCAGGCATCTGCACTAAGACCCTCTGCCTTTCTGACTCTATGGAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp AGAAAATCCTCAAGTGGCTCACCTAATTGTCAGAAAGTGAGTGAGTaGCAACAGACCTCAGGCACGAAACTATTTTCAGCACCAATTACA +
Preference number: 1 (lower is better)
Translates to: RKSSSGSPNCQKVSE*QQTSGTKLFSAPIT
Trigger: TGTAATTGGTGCTGAAAATAGTTTCGTGCCTGAGGTCTGTTGTCACTCACTCACTTTCTGACAATTAGGTGAGCCACTTGAGGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 90 bp CTTGTGTTCCTTTTCCAGTCTTCTTTTCTCACTCATCAACTCCTCTaGATGAGTTCATCCACTTTCATAGTTTCAGTGCTACTACCCATC +
Preference number: 1 (lower is better)
Translates to: LVFLFQSSFLTHQLL*MSSSTFIVSVLLPI
Trigger: GATGGGTAGTAGCACTGAAACTATGAAAGTGGATGAACTCATCCAGAGGAGTTGATGAGTGAGAAAAGAAGACTGGAAAAGGAACACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp TGGAAATGCAGGACGAAAAGTGGAATCCAAGCTTTGGCCACGTACTaGAACTTCATTACTTCAATGAAACAGAGCAAATCTCCATGGAAA +
Preference number: 1 (lower is better)
Translates to: WKCRTKSGIQALATY*NFITSMKQSKSPWK
Trigger: TTTCCATGGAGATTTGCTCTGTTTCATTGAAGTAATGAAGTTTCAGTACGTGGCCAAAGCTTGGATTCCACTTTTCGTCCTGCATTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 90 bp GTCAGATTCCCAGTTCCACACTCCATTACACCAGACTTTCTCATCTaGTCTGAGATGCCAAATTTCCTTACAAACAGGTTCAAGAAAATA +
Preference number: 1 (lower is better)
Translates to: VRFPVPHSITPDFLI*SEMPNFLTNRFKKI
Trigger: TATTTTCTTGAACCTGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGGTGTAATGGAGTGTGGAACTGGGAATCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR CCA 90 bp ACCCATCAATTGGTAGGATATGTCTATAGCTTGTCAAATAGCAGGTaGGCATGTCTTTCAGACATCAGGTCAACTGATTTTTGTTCCAGT +
Preference number: 1 (lower is better)
Translates to: THQLVGYVYSLSNSR*ACLSDIRSTDFCSS
Trigger: ACTGGAACAAAAATCAGTTGACCTGATGTCTGAAAGACATGCCCACCTGCTATTTGACAAGCTATAGACATATCCTACCAATTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp CCTGTCTCTGTAGATAGTGCCATTAACATCCAAGTTACCCAGGCTTaGAAAATGGATGAAAAATGCACTCAACCCTTACTCCTATATTCA +
Preference number: 1 (lower is better)
Translates to: PVSVDSAINIQVTQA*KMDEKCTQPLLLYS
Trigger: TGAATATAGGAGTAAGGGTTGAGTGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTATCTACAGAGACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 90 bp GTAGATCATATGAAGAATTTCTCCAGCCTTTTATACACAGTAGGGTaGGTCTACAAGGAGTTGCTTACACTTCCAGGTTTAATACACCTA +
Preference number: 1 (lower is better)
Translates to: VDHMKNFSSLLYTVG*VYKELLTLPGLIHL
Trigger: TAGGTGTATTAAACCTGGAAGTGTAAGCAACTCCTTGTAGACCCACCCTACTGTGTATAAAAGGCTGGAGAAATTCTTCATATGATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp ATTCCCAGTTCCACACTCCATTACACCAGACTTTCTCATCTGGTCTaGGATGCCAAATTTCCTTACAAACAGGTTCAAGAAAATAACAAA +
Preference number: 1 (lower is better)
Translates to: IPSSTLHYTRLSHLV*DAKFPYKQVQENNK
Trigger: TTTGTTATTTTCTTGAACCTGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGGTGTAATGGAGTGTGGAACTGGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR TCA 90 bp ACATGCACCTCCTTCTGTTTTCCTCTCTTGGTGAATGCTTACTGCTaGGGTATTATATATTCCAAAGGTATTGAATTTCCAGTCAGCATA +
Preference number: 1 (lower is better)
Translates to: TCTSFCFPLLVNAYC*GIIYSKGIEFPVSI
Trigger: TATGCTGACTGGAAATTCAATACCTTTGGAATATATAATACCTCAGCAGTAAGCATTCACCAAGAGAGGAAAACAGAAGGAGGTGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp AAATGGGGAATAACACCACTTTCCTCTGAGAAGCCATTGCAAGAATaGGACATTCTTGGAAAATTCTTTGCACAATGCCTGTTACTTTTT +
Preference number: 1 (lower is better)
Translates to: KWGITPLSSEKPLQE*DILGKFFAQCLLLF
Trigger: AAAAAGTAACAGGCATTGTGCAAAGAATTTTCCAAGAATGTCTCATTCTTGCAATGGCTTCTCAGAGGAAAGTGGTGTTATTCCCCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 90 bp CACATGAACCTAGGACCACTAAATCCAATGTCAGACGTGTTTAAATaGTGCACTGCTCTACATTTTTCTATTATGCAAAGAGCTAGAAAA +
Preference number: 1 (lower is better)
Translates to: HMNLGPLNPMSDVFK*CTALHFSIMQRARK
Trigger: TTTTCTAGCTCTTTGCATAATAGAAAAATGTAGAGCAGTGCACCATTTAAACACGTCTGACATTGGATTTAGTGGTCCTAGGTTCATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp TTTCATCAATCCTCACATTTCTCCACATTACTTCTATTAAATCATTaGGGTGCCTCATTTACATGCTCTTGTAGCACCCTATACTTTGTC +
Preference number: 1 (lower is better)
Translates to: FHQSSHFSTLLLLNH*GASFTCSCSTLYFV
Trigger: GACAAAGTATAGGGTGCTACAAGAGCATGTAAATGAGGCACCTCAATGATTTAATAGAAGTAATGTGGAGAAATGTGAGGATTGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 90 bp CTTGGTGAATGCTTACTGCTGAGGTATTATATATTCCAAAGGTATTaGATTTCCAGTCAGCATAAGTCAAATGCAAATGGTTATCCACCA +
Preference number: 1 (lower is better)
Translates to: LGECLLLRYYIFQRY*ISSQHKSNANGYPP
Trigger: TGGTGGATAACCATTTGCATTTGACTTATGCTGACTGGAAATTCAATACCTTTGGAATATATAATACCTCAGCAGTAAGCATTCACCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 90 bp AGAATTCTTGATTTTTGGAACCTTGATTATAAGCTGCCTGATGTCTaGAACCAAAACTTCTGTAACACTCTATTCCACGTGTACTTACAA +
Preference number: 1 (lower is better)
Translates to: RILDFWNLDYKLPDV*NQNFCNTLFHVYLQ
Trigger: TTGTAAGTACACGTGGAATAGAGTGTTACAGAAGTTTTGGTTCCAGACATCAGGCAGCTTATAATCAAGGTTCCAAAAATCAAGAATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACAGAAAGTGAGTGAGTaGCAACAGACCTCAGGCACG +
Preference number: 2 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTQKVSE*QQTSGT
Trigger: CGTGCCTGAGGTCTGTTGTCACTCACTCACTTTCTG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTACTTGGCTGGAAATGCTaGGTGTCTTGGACTGGTCTG +
Preference number: 2 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLLGWKC*VSWTGL
Trigger: CAGACCAGTCCAAGACACTCAGCATTTCCAGCCAAG...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTAGTCACTGCACGGCATaGGATTGTCAGCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: TGHPYRRWLIHENPFGWASHCTA*DCQPHF
Trigger: AAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR GCA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTATTTTTAGGCGGTGGTaGATAGCCAGGCAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: TGHPYRRWLIHENPFGWAIFRRW*IARQRK
Trigger: TTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAAT...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAACACCACTTTCCTCTaGGAAGCCATTGCAAGAATG +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHNTTFL*EAIARM
Trigger: CATTCTTGCAATGGCTTCTCAGAGGAAAGTGGTGTT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATTATAACCTCTTGGCATaGGCTTCAGAGGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHYNLLA*ASEAEI
Trigger: AATCTCTGCCTCTGAAGCTCATGCCAAGAGGTTATA...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGAGAAGGAAGTGGCCTaGAAAGAGGGCAATAACATT +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHEKEVA*KEGNNI
Trigger: AATGTTATTGCCCTCTTTTCAGGCCACTTCCTTCTC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAGCAAAGTCATCTTCTaGGAAGGAAGTGGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHSKVIF*EGSGLK
Trigger: TTTCAGGCCACTTCCTTCTCAGAAGATGACTTTGCT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATTACCACTTTTCAGTTTaGGGATGGAATGCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHYHFSV*GWNAFG
Trigger: GCCAAAGGCATTCCATCCCCAAACTGAAAAGTGGTA...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTATTAGTGCTCTGGAATaGTCAGGGTTTCTAATACCT +
Preference number: 2 (lower is better)
Translates to: TGHPYRRWLIHENPFGWAISALE*SGFLIP
Trigger: AGGTATTAGAAACCCTGATCATTCCAGAGCACTAAT...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAGCAGTTCTGATGAATaGTTCCCAGAATCAAGTGAG +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHSSSDE*FPESSE
Trigger: CTCACTTGATTCTGGGAATCATTCATCAGAACTGCT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATCTAAGATCACCCCTCTaGAACTCCCTTATATTTGGT +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHLRSPL*NSLIFG
Trigger: ACCAAATATAAGGGAGTTTCAGAGGGGTGATCTTAG...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCTGACAGAATCTAGGTaGCAGCTAAGATCACCCCTC +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISLTESR*QLRSPL
Trigger: GAGGGGTGATCTTAGCTGTCACCTAGATTCTGTCAG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATACTACTCATTCACTGTaGCCTTGGGAAACTTACCTA +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHTTHSL*PWETYL
Trigger: TAGGTAAGTTTCCCAAGGTCACAGTGAATGAGTAGT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAACTGTCTCCCATACATaGTTCGTCTTCACTCTAAAC +
Preference number: 2 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLTVSHT*FVFTLN
Trigger: GTTTAGAGTGAAGACGAATCATGTATGGGAGACAGT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACATCATTTGGTTCTTGTTaGAGTCTTCTGTGTTCACCC +
Preference number: 2 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTSFGSC*SLLCSP
Trigger: GGGTGAACACAGAAGACTGCAACAAGAACCAAATGA...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGAAAATCTCTGCCAATaGTCTCCATATCAGTTAACC +
Preference number: 2 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTENLCQ*SPYQLT
Trigger: GGTTAACTGATATGGAGATCATTGGCAGAGATTTTC...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTCTCAGTAGATTCTACTaGCTTTGGGGAGCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: ASASTPSLLLWPSSETSSLSRFY*LWGAQK
Trigger: TTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGAG...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAGATGTAGCCAAGTATaGCCTAGGAAGGGATCAGTG +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISRCSQV*PRKGSV
Trigger: CACTGATCCCTTCCTAGGCCATACTTGGCTACATCT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATTGGGGTAGCATGGATTaGGACAGGAAGTGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: LCYANQENVVPQTSEGSNWGSMD*DRKWVQ
Trigger: CTGAACCCACTTCCTGTCTCAATCCATGCTACCCCA...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCCTGGGCACTTCAGTTTaGGAAATCAATTGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: DRCQVFITSGQKILKWLTLGTSV*EINWLD
Trigger: GTCCAACCAATTGATTTCTCAAACTGAAGTGCCCAG...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAAAGGGATAATCCATTaGATAAGGAGACAATGTAGC +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHKGIIH*IRRQCS
Trigger: GCTACATTGTCTCCTTATTCAATGGATTATCCCTTT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAACTCCTGGCCTCAAGTaGTTTGCCTGCCTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNATPGLK*FACLGF
Trigger: GAAGCCAAGGCAGGCAAATCACTTGAGGCCAGGAGT...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATTGGATGCTTCATTTCTaGAATCCCATGCTTAACATT +
Preference number: 2 (lower is better)
Translates to: MLPFNTSASISRTTYPKHWMLHF*NPMLNI
Trigger: AATGTTAAGCATGGGATTTCAGAAATGAAGCATCCA...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp GAATGCCATCCTACCCACCTATATTTTGCCCTGGAGAGGGTGAAAAGGGAAAGGTCATCTGGTCTGAGATaGCAAATTTCCTTACAAACA +
Preference number: 2 (lower is better)
Translates to: ECHPTHLYFALERVKRERSSGLR*QISLQT
Trigger: TGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGA...CCTTTCCCTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTAGGATGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGAATCAACCTACACTTaGTATCCCTTACATCACATT +
Preference number: 2 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLESTYT*YPLHHI
Trigger: AATGTGATGTAAGGGATAGCAAGTGTAGGTTGATTC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTAGCTATATGACACAGTaGTTTGAGCCAATACTAAAC +
Preference number: 2 (lower is better)
Translates to: ECRGTIIGNCSLYLLASASYMTQ*FEPILN
Trigger: GTTTAGTATTGGCTCAAACCACTGTGTCATATAGCT...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR CCA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTTCTTGCTTGCCTCACTaGCTACAGTCACTGAACAAG +
Preference number: 2 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSSCLPH*LQSLNK
Trigger: CTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGA...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR CAA 90 bp TTGGTTGGGCTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTTTCTATTGTA +
Preference number: 2 (lower is better)
Translates to: LVGLLCVSDIKMHFL*AGGSSSSSEELSIV
Trigger: TACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTACTGGCTACAGTCACTaGACAAGGCTTACTGAGGAC +
Preference number: 2 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSTGYSH*TRLTED
Trigger: GTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR TCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCGCTTTGGCCACGTACTaGAACTTCATTACTTCAATG +
Preference number: 2 (lower is better)
Translates to: DRCQVFITSGQKILKWLTALATY*NFITSM
Trigger: CATTGAAGTAATGAAGTTTCAGTACGTGGCCAAAGC...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTTGGAACATTTTGTTCTaGTTCAAATGGTATAACCGT +
Preference number: 2 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAWNILF*FKWYNR
Trigger: ACGGTTATACCATTTGAAGCAGAACAAAATGTTCCA...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAATTAAATCATTGAGGTaGCTCATTTACATGCTCTTG +
Preference number: 2 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLIKSLR*LIYMLL
Trigger: CAAGAGCATGTAAATGAGGCACCTCAATGATTTAAT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAACCTCAGAGGTTCCCTaGAGTGTTTGGGGTAGCATG +
Preference number: 2 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNATSEVP*SVWGSM
Trigger: CATGCTACCCCAAACACTCCAGGGAACCTCTGAGGT...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTATCATGGGAAAAGCTTaGATAGCCATACGTAGGTGT +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISIMGKA*IAIRRC
Trigger: ACACCTACGTATGGCTATCCAAGCTTTTCCCATGAT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 90 bp AGTTTCAGTGCTACTACCCATCAATTGGTAGGATATGTCTATAGCTaGTCAAATAGCAGGTGGGCATGTCTTTCAGACATCAGGTCAACT +
Preference number: 2 (lower is better)
Translates to: SFSATTHQLVGYVYS*SNSRWACLSDIRST
Trigger: AGTTGACCTGATGTCTGAAAGACATGCCCACCTGCTATTTGACAAGCTATAGACATATCCTACCAATTGATGGGTAGTAGCACTGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCACAATCACTGGTTGGCTaGCAGAATCTAGGTGACAGC +
Preference number: 2 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAQSLVG*QNLGDS
Trigger: GCTGTCACCTAGATTCTGTCAGCCAACCAGTGATTG...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp AAGGATACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTATGGCTGATGTAAGCTaGCGTACAAGATATACAGAC +
Preference number: 2 (lower is better)
Translates to: KDTRRLVVAISLSGSAVSMADVS*RTRYTD
Trigger: GTCTGTATATCTTGTACGGCAGCTTACATCAGCCAT...ACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR GCA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATTACCCACCTATATTTTaGCCTGGAGAGGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHYPPIF*PGEGEK
Trigger: CTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTA...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR-3UTR GCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCAAAATCTGCTCTTCTaGTGGCTCCAAGATATCAAT +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISQNLLF*WLQDIN
Trigger: ATTGATATCTTGGAGCCAGCAGAAGAGCAGATTTTG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAATGAGCCTCATGGATaGTTCATTTCTGAAATCCCA +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISNEPHG*FISEIP
Trigger: TGGGATTTCAGAAATGAAGCATCCATGAGGCTCATT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp TTGATCTCATCTACATCAGAACAGTCATTGAGAATTTCCATAAAAAGCCCATCTCCCATTTTTAGGCGGTaGTGCATAGCCAGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LISSTSEQSLRISIKSPSPIFRR*CIARQR
Trigger: CCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGG...AGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGAGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CCA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTTTTCTTCGGTCTCATTaGACACCAAGAACCATCTTC +
Preference number: 2 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSFLRSH*TPRTIF
Trigger: GAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAA...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CCA 90 bp AAACATAGGAGGACAGTACTGGGGATCAACTGGAATAAGGGAAAGAAAATCCAAAGATGCATTTCCTTTTaGCAGGAGGGTCTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: KHRRTVLGINWNKGKKIQRCISF*QEGLPL
Trigger: AAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCT...TTGGATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATATGCAGGACGAAAAGTaGAATCCAAGCTTTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LCYANQENVVPQTSEGSNMQDEK*NPSFGH
Trigger: GTGGCCAAAGCTTGGATTCCACTTTTCGTCCTGCAT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAGTCAGAACAGTCTCTaGTCAATCCTACTTTGCTTA +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISSQNSL*SILLCL
Trigger: TAAGCAAAGTAGGATTGACCAGAGACTGTTCTGACT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAACGTTGCATGTTCTTaGAAAATATGGCTAGACCAC +
Preference number: 2 (lower is better)
Translates to: QRNYATSCRRMDRLLRISNVACS*KIWLDH
Trigger: GTGGTCTAGCCATATTTTCCAAGAACATGCAACGTT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATAGATTCTACTGGCTTTaGGGAGCTCAGAAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: LCYANQENVVPQTSEGSNRFYWL*GAQKGH
Trigger: ATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 90 bp AAGTCTAGGTCAGACTCCCAAGTCCACTACTCATTCACTGTGACCTaGGGAAACTTACCTAAACCTGTTTCATTTGTAAAATGGGGAATA +
Preference number: 2 (lower is better)
Translates to: KSRSDSQVHYSFTVT*GNLPKPVSFVKWGI
Trigger: TATTCCCCATTTTACAAATGAAACAGGTTTAGGTAAGTTTCCCAAGGTCACAGTGAATGAGTAGTGGACTTGGGAGTCTGACCTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 90 bp GATGAGTTCATCCACTTTCATAGTTTCAGTGCTACTACCCATCAATaGGTAGGATATGTCTATAGCTTGTCAAATAGCAGGTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: DEFIHFHSFSATTHQ*VGYVYSLSNSRWAC
Trigger: ACATGCCCACCTGCTATTTGACAAGCTATAGACATATCCTACCAATTGATGGGTAGTAGCACTGAAACTATGAAAGTGGATGAACTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTCTGAACAAGGCTTACTaGGGACGCTTGAACTTTCTA +
Preference number: 2 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSLNKAY*GRLNFL
Trigger: TAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAG...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR TCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCGACCACATTAAAGGCTaGCGGATTAATAATCATGAT +
Preference number: 2 (lower is better)
Translates to: DRCQVFITSGQKILKWLTDHIKG*RINNHD
Trigger: ATCATGATTATTAATCCGTCAGCCTTTAATGTGGTC...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATATTGTCAGAAAGTGAGTaGGTGACAACAGACCTCAGG +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSILSESE*VTTDLR
Trigger: CCTGAGGTCTGTTGTCACTCACTCACTTTCTGACAA...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTTGATATTGGCGTATGGTCATCTACTTTCTTCTTaGTTGCCTCACTGGCTACAG +
Preference number: 2 (lower is better)
Translates to: KENPNLANLMTCLILAYGHLLSS*LPHWLQ
Trigger: CTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATG...ACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CCA 90 bp CCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCATGGTGTGCCAAAATTaGAATCCATACTTGTCAGAT +
Preference number: 2 (lower is better)
Translates to: PSLKECVRRQPGELSCYLMVCQN*NPYLSD
Trigger: ATCTGACAAGTATGGATTCCAATTTTGGCACACCAT...GAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAGCACCAATTACACTGTaGGGGGTTACCAGAACAAGA +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIAPITL*GVTRTR
Trigger: TCTTGTTCTGGTAACCCCCCACAGTGTAATTGGTGC...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCATACGCAGAGAGCTTTTaGGGTAAGTCTAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAYAESF*GKSRSD
Trigger: GTCTGACCTAGACTTACCCCAAAAGCTCTCTGCGTA...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTAGCACCATTCGCACCTaGCAATATGGCACTAGCAAT +
Preference number: 2 (lower is better)
Translates to: AKQFKICLALVIPSEFCISTIRT*QYGTSN
Trigger: ATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGCT...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR TCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTCTGTCACTAGCTATATaGCACAGTGGTTTGAGCCAA +
Preference number: 2 (lower is better)
Translates to: FNISSPRPPCVTKLSLIILSLAI*HSGLSQ
Trigger: TTGGCTCAAACCACTGTGTCATATAGCTAGTGACAG...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR GCA 90 bp AAACATAGGAGGACAGTACTGGGGATCAACTGGAATAAGGGAAAGAAAATCCAAGCAAATCTGATGACATaGTTGATATTGGCGTATGGT +
Preference number: 2 (lower is better)
Translates to: KHRRTVLGINWNKGKKIQANLMT*LILAYG
Trigger: ACCATACGCCAATATCAAGCATGTCATCAGATTTGC...TTGGATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR GCA 90 bp CCATTACACCAGACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACAAGCCTTCTACAGTTATaGCATTTCCCAAAGAGACAT +
Preference number: 2 (lower is better)
Translates to: PLHQTFSSGLRCQISLQTSLLQL*HFPKRH
Trigger: ATGTCTCTTTGGGAAATGGCATAACTGTAGAAGGCT...TGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGGTGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR CAA 90 bp CAGGCAAAGGAAATAGCTTCCCATTTACTTTTATACATAGACTATTaGGATAGTTATCTTCTTGAGGGCAACTTGTCTCTGCCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: QAKEIASHLLLYIDY*DSYLLEGNLSLPGK
Trigger: TTTGCCTGGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTCCTTTGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR TCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTTGCAGCGTGTCATACTaGTATATTTTTATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: FNISSPRPPCVTKLSLIICSVSY*YIFMPS
Trigger: GGAGGGCATAAAAATATATCAGTATGACACGCTGCA...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR GCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTCCACCGCACCCAGCTTaGTGTAATTTTTCATTTCAT +
Preference number: 2 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIPPHPA*CNFSFH
Trigger: ATGAAATGAAAAATTACAGCAAGCTGGGTGCGGTGG...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR CCA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTCAAGAACCATCTTCTTaGAATTTGATCTCATCTACA +
Preference number: 2 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSQEPSS*NLISST
Trigger: TGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTG...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAAAGCTGCCTGATGTCTaGAACCAAAACTTCTGTAAC +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIKLPDV*NQNFCN
Trigger: GTTACAGAAGTTTTGGTTCCAGACATCAGGCAGCTT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTCCAGAGAATACCCACTaGGGATCCTATTTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIPENTH*GSYFCY
Trigger: ATAACAAAAATAGGATCCTCAGTGGGTATTCTCTGG...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR TCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTATGGAATATTGTGTACTaGAGCCAAGCCACTCAAAAA +
Preference number: 2 (lower is better)
Translates to: VTSYMTQWFEPILNQRELWNIVY*SQATQK
Trigger: TTTTTGAGTGGCTTGGCTTCAGTACACAATATTCCA...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR GCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATTGTCAGGGCAGAATCTaGATAGTGCTTTTAAACATA +
Preference number: 2 (lower is better)
Translates to: LCYANQENVVPQTSEGSNCQGRI*IVLLNI
Trigger: TATGTTTAAAAGCACTATGCAGATTCTGCCCTGACA...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAACCTTGATTATAAGCTaGCTGATGTCTGGAACCAAA +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSITLIIS*LMSGTK
Trigger: TTTGGTTCCAGACATCAGGCAGCTTATAATCAAGGT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp ATCATGGTGATGATTGCACAGCTCTATGTATTTACTAAAATCACTGAATTGTGCCCAGACTTTCTCATCTaGTCTGAGATGCCAAATTTC +
Preference number: 2 (lower is better)
Translates to: IMVMIAQLYVFTKITELCPDFLI*SEMPNF
Trigger: GAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGG...GCACAATTCAGTGATTTTAGTAAATACATAGAGCTGTGCAATCATCACCATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAATCTGCTCTTCTGCTaGCTCCAAGATATCAATATT +
Preference number: 2 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSNLLFC*LQDINI
Trigger: AATATTGATATCTTGGAGCCAGCAGAAGAGCAGATT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAAACACACAAAGGCCATaGAAACTTGAGAAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSINTQRP*KLEKVK
Trigger: TTTCACCTTCTCAAGTTTCCATGGCCTTTGTGTGTT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATTCAGACGTGTTTAAATaGTGCACTGCTCTACATTTT +
Preference number: 2 (lower is better)
Translates to: LCYANQENVVPQTSEGSNSDVFK*CTALHF
Trigger: AAAATGTAGAGCAGTGCACCATTTAAACACGTCTGA...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAAGATACAGTTATGGTTaGATGTATCTGATGCTGAGA +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIRYSYG*MYLMLR
Trigger: TCTCAGCATCAGATACATTCAACCATAACTGTATCT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAGATGGTGAATCAGGCTaGATCAATCTAAATAACAAC +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIDGESG*INLNNN
Trigger: GTTGTTATTTAGATTGATTCAGCCTGATTCACCATC...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR GCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAGACGTGTTTAAATGGTaGACTGCTCTACATTTTTCT +
Preference number: 2 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIDVFKW*TALHFS
Trigger: AGAAAAATGTAGAGCAGTGCACCATTTAAACACGTC...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR TCA 90 bp TTGATCTCATCTACATCAGAACAGTCATTGAGAATTTCCATAAAAAGCCCATCTATTCTTCCCAATTTCTaGTGCCCAAGAAATGGAAAT +
Preference number: 2 (lower is better)
Translates to: LISSTSEQSLRISIKSPSILPNF*CPRNGN
Trigger: ATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAAT...AGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGAGATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR GCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTTCCTCTCCCTTCTTATaGCAAACAATTCAAAATTTG +
Preference number: 2 (lower is better)
Translates to: FNISSPRPPCVTKLSLIISSPFL*QTIQNL
Trigger: CAAATTTTGAATTGTTTGGCATAAGAAGGGAGAGGA...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR TCA 72 bp TCAGAGGTTCCCTGGAGTGTTTGGGGTAGCATGGATTaGGACAGGAAGTGGGTTCAGGCCCATCTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: SEVPWSVWGSMD*DRKWVQAHLPQ
Trigger: TTGGGGGAGATGGGCCTGAACCCACTTCCTGTCTCAATCCATGCTACCCCAAACACTCCAGGGAACCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 72 bp CGCTATTGGAGCACAACTTTGGTGGGGGCAGGATCCTaGCTTGTGTTCCAAGTGCCTGATACAATGCCTGGC +
Preference number: 3 (lower is better)
Translates to: RYWSTTLVGAGS*LVFQVPDTMPG
Trigger: GCCAGGCATTGTATCAGGCACTTGGAACACAAGGCAGGATCCTGCCCCCACCAAAGTTGTGCTCCAATAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp CACACCTCTGTTGACGCTATTGGAGCACAACTTTGGTaGGGGCAGGATCCTGCCTTGTGTTCCAAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: HTSVDAIGAQLW*GQDPALCSKCL
Trigger: CAGGCACTTGGAACACAAGGCAGGATCCTGCCCCCACCAAAGTTGTGCTCCAATAGCGTCAACAGAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp AAACCTCAGAGGTTCCCTGGAGTGTTTGGGGTAGCATaGATTGAGACAGGAAGTGGGTTCAGGCCCATCTCC +
Preference number: 3 (lower is better)
Translates to: KPQRFPGVFGVA*IETGSGFRPIS
Trigger: GGAGATGGGCCTGAACCCACTTCCTGTCTCAATCCATGCTACCCCAAACACTCCAGGGAACCTCTGAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 72 bp GTCCCCACATCAAGAGCAGTACATAGTCCAACGCTCTaGACAAAGCACACACTCGGGAATTGCTGCGCTAAC +
Preference number: 3 (lower is better)
Translates to: VPTSRAVHSPTL*TKHTLGNCCAN
Trigger: GTTAGCGCAGCAATTCCCGAGTGTGTGCTTTGTGCAGAGCGTTGGACTATGTACTGCTCTTGATGTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR CCA 72 bp TTTCACACCTCTGTTGACGCTATTGGAGCACAACTTTaGTGGGGGCAGGATCCTGCCTTGTGTTCCAAGTGC +
Preference number: 3 (lower is better)
Translates to: FHTSVDAIGAQL*WGQDPALCSKC
Trigger: GCACTTGGAACACAAGGCAGGATCCTGCCCCCACCAAAGTTGTGCTCCAATAGCGTCAACAGAGGTGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATATTGGAGCACAACTTaGGTGGGGGCAGGATCCTGC +
Preference number: 3 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLYWSTT*VGAGSC
Trigger: GCAGGATCCTGCCCCCACCAAAGTTGTGCTCCAATA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGGACAAGTCAGCTCCTaGGAGCTGCACCAACTCTTA +
Preference number: 3 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLGQVSS*ELHQLL
Trigger: TAAGAGTTGGTGCAGCTCCAAGGAGCTGACTTGTCC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATGGGGTTTTACCAAGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLWGFTK*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACTTGGTAAAACCCCA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp ATCAACCGAAGTCACACTGGGCACCCTTACAGAAGATaGCTGATACATGAGAACCCCTTTGGTTGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: INRSHTGHPYRR*LIHENPFGWAA
Trigger: AGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR CCA 72 bp ATGGAATGCCTTTGGCTCAGTAGATTCTACTGGCTTTaGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGG +
Preference number: 3 (lower is better)
Translates to: MECLWLSRFYWL*GAQKGHNGAYR
Trigger: CCTGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGAGCCAAAGGCATTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATTACCACTTTTCAGTTaGGGGATGGAATGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLLPLFS*GMECLW
Trigger: CCAAAGGCATTCCATCCCCAAACTGAAAAGTGGTAA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAGCCAAGATCGCACCATaGCACTCCATCCCGGGCAAC +
Preference number: 3 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAAKIAP*HSIPGN
Trigger: GTTGCCCGGGATGGAGTGCAATGGTGCGATCTTGGC...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATTCATTCACTGTGACCTaGGGAAACTTACCTAAACCT +
Preference number: 3 (lower is better)
Translates to: MLPFNTSASISRTTYPKHSFTVT*GNLPKP
Trigger: AGGTTTAGGTAAGTTTCCCAAGGTCACAGTGAATGA...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATATCTTGAGTCTTCCTTaGAAATGGCTTCAGCATCCA +
Preference number: 3 (lower is better)
Translates to: MLPFNTSASISRTTYPKHILSLP*KWLQHP
Trigger: TGGATGCTGAAGCCATTTCAAAGGAAGACTCAAGAT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATAGGCAGGAGAATCGCTaGAACCCTGTAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LCYANQENVVPQTSEGSNRQENR*NPVGGG
Trigger: ACCTCCACCTACAGGGTTCAAGCGATTCTCCTGCCT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp CTAATTAACGTCACTTCAGTTTACGCAGAGAGCTTTTaGGGTAAGTCTAGGTCAGACTCCCAAGTCCACTAC +
Preference number: 3 (lower is better)
Translates to: LINVTSVYAESF*GKSRSDSQVHY
Trigger: GTAGTGGACTTGGGAGTCTGACCTAGACTTACCCCAAAAGCTCTCTGCGTAAACTGAAGTGACGTTAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAAGATACAGTTATGGTaGAATGTATCTGATGCTGAG +
Preference number: 3 (lower is better)
Translates to: MLPFNTSASISRTTYPKHKIQLW*NVSDAE
Trigger: CTCAGCATCAGATACATTCAACCATAACTGTATCTT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATGCATAGTTTCTTTTTaGAGAAGGCAAGCCTCAAAT +
Preference number: 3 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLCIVSF*RRQASN
Trigger: ATTTGAGGCTTGCCTTCTCAAAAAAGAAACTATGCA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCCTGGGCACTTCAGTTaGAGAAATCAATTGGTTGGA +
Preference number: 3 (lower is better)
Translates to: QRNYATSCRRMDRLLRISPGHFS*RNQLVG
Trigger: TCCAACCAATTGATTTCTCAAACTGAAGTGCCCAGG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAGAAATGCTGAGTGTCTaGGACTGGTCTGAAGGAAGA +
Preference number: 3 (lower is better)
Translates to: KRCMFLENMARPPFPYHLEMLSV*DWSEGR
Trigger: TCTTCCTTCAGACCAGTCCAAGACACTCAGCATTTC...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATCTGACAAAGAATATTaGTGCAACTTTACAGTGCCA +
Preference number: 3 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLSDKEY*CNFTVP
Trigger: TGGCACTGTAAAGTTGCACAAATATTCTTTGTCAGA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp GATTCCCAGAATCAAGTGAGTCCTCCTTTAGTCCAATaGGATGATGTCAGGAATGTTACTTCCACTGCTGGT +
Preference number: 3 (lower is better)
Translates to: DSQNQVSPPLVQ*DDVRNVTSTAG
Trigger: ACCAGCAGTGGAAGTAACATTCCTGACATCATCTCATTGGACTAAAGGAGGACTCACTTGATTCTGGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR TCA 72 bp TCAAGTGGCTCACCTAATTGTCAGAAAGTGAGTGAGTaGCAACAGACCTCAGGCACGAAACTATTTTCAGCA +
Preference number: 3 (lower is better)
Translates to: SSGSPNCQKVSE*QQTSGTKLFSA
Trigger: TGCTGAAAATAGTTTCGTGCCTGAGGTCTGTTGTCACTCACTCACTTTCTGACAATTAGGTGAGCCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp GAAAATCCTCAAGTGGCTCACCTAATTGTCAGAAAGTaGGTGAGTGACAACAGACCTCAGGCACGAAACTAT +
Preference number: 3 (lower is better)
Translates to: ENPQVAHLIVRK*VSDNRPQARNY
Trigger: ATAGTTTCGTGCCTGAGGTCTGTTGTCACTCACTCACTTTCTGACAATTAGGTGAGCCACTTGAGGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp CTAGGTCAGACTCCCAAGTCCACTACTCATTCACTGTaGCCTTGGGAAACTTACCTAAACCTGTTTCATTTG +
Preference number: 3 (lower is better)
Translates to: LGQTPKSTTHSL*PWETYLNLFHL
Trigger: CAAATGAAACAGGTTTAGGTAAGTTTCCCAAGGTCACAGTGAATGAGTAGTGGACTTGGGAGTCTGACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp ATCCCATGCTTAACATTCATCACTGTCTCCCATACATaGTTCGTCTTCACTCTAAACTGCCTCCTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: IPCLTFITVSHT*FVFTLNCLLSL
Trigger: CAGAGACAGGAGGCAGTTTAGAGTGAAGACGAATCATGTATGGGAGACAGTGATGAATGTTAAGCATGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp AAGGATACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTTGGATAGTTATCTTCTaGAGGGCAACTTGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: KDTRRLVVAISLSGSAVSWIVIF*RATCLC
Trigger: GCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCA...ACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CAA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTCCAAGAACCATCTTCTaGGAATTTGATCTCATCTAC +
Preference number: 3 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAPRTIF*EFDLIY
Trigger: GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGG...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR TCA 72 bp GGGAAGAAATCATGCTTTCGGACTGTCCCTTCTGTTTaGATTAAGCAGCAAAGTCATCTTCTGAGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: GKKSCFRTVPSV*IKQQSHLLRRK
Trigger: CTTCCTTCTCAGAAGATGACTTTGCTGCTTAATTCAAACAGAAGGGACAGTCCGAAAGCATGATTTCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 72 bp GGGAAAGAAAATCCAAACCTGGCAAATCTGATGACATaGTTGATATTGGCGTATGGTGGAATGGTACTGAGT +
Preference number: 3 (lower is better)
Translates to: GKENPNLANLMT*LILAYGGMVLS
Trigger: ACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR GCA 72 bp GGTCTTAGTGCAGATGCCTGCATAAAGATAAAACGTTaGATGTTCTTGGAAAATATGGCTAGACCACCCTTC +
Preference number: 3 (lower is better)
Translates to: GLSADACIKIKR*MFLENMARPPF
Trigger: GAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTTTATCTTTATGCAGGCATCTGCACTAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp CTGAGGACGCTTGAACTTTCTATTTTTGTACACGGTTaGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTC +
Preference number: 3 (lower is better)
Translates to: LRTLELSIFVHG*LDTFIASFFGL
Trigger: GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CAA 90 bp AAACATAGGAGGACAGTACTGGGGATCAACTGGAATAAGGGAAAGAAAATCCAACTTTCTTCGGTCTCATaGGACACCAAGAACCATCTT +
Preference number: 3 (lower is better)
Translates to: KHRRTVLGINWNKGKKIQLSSVS*DTKNHL
Trigger: AAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAG...TTGGATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CAA 90 bp AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTTGATATTGGCGTATGGTCTACTTTCTTCTTGCTaGCCTCACTGGCTACAGTCA +
Preference number: 3 (lower is better)
Translates to: KENPNLANLMTCLILAYGLLSSC*PHWLQS
Trigger: TGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAG...ACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CAA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSKMHFL*AGGSSS
Trigger: AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CAA 90 bp GGGAAAGGAATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTGATGGTGTGCCAAAATaGGAATCCATACTTGTCAGA +
Preference number: 3 (lower is better)
Translates to: GKGINFYWEITTCLTPRLDGVPK*ESILVR
Trigger: TCTGACAAGTATGGATTCCAATTTTGGCACACCATC...AAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATTCCTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCGAAACTCCCTTATATTaGGTTAAGCAGAAATCTGGG +
Preference number: 3 (lower is better)
Translates to: DRCQVFITSGQKILKWLTETPLY*VKQKSG
Trigger: CCCAGATTTCTGCTTAACCAAATATAAGGGAGTTTC...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTCCAATCAAGAAAATGTaGTACCTCAAACATCTGAAG +
Preference number: 3 (lower is better)
Translates to: ASASTPSLLLWPSSETSSPIKKM*YLKHLK
Trigger: CTTCAGATGTTTGAGGTACAACATTTTCTTGATTGG...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp CAGACTAGAGATCCAAGAAAAAGCAGTTCTGATGAATaGTTCCCAGAATCAAGTGAGTCCTCCTTTAGTCCA +
Preference number: 3 (lower is better)
Translates to: QTRDPRKSSSDE*FPESSESSFSP
Trigger: TGGACTAAAGGAGGACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR TCA 72 bp AGGGTCTGGATAAGAAACAGTGACCACATTAAAGGCTaGCGGATTAATAATCATGATGTTGCCATAAGGCCA +
Preference number: 3 (lower is better)
Translates to: RVWIRNSDHIKG*RINNHDVAIRP
Trigger: TGGCCTTATGGCAACATCATGATTATTAATCCGTCAGCCTTTAATGTGGTCACTGTTTCTTATCCAGACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp AATAATGACCAGAATCAAGGAAGGCAAGGAACACTGTaGGTCAAAGCTTCCAGCAAATCAAAGGGAATGATC +
Preference number: 3 (lower is better)
Translates to: NNDQNQGRQGTL*VKASSKSKGMI
Trigger: GATCATTCCCTTTGATTTGCTGGAAGCTTTGACTCACAGTGTTCCTTGCCTTCCTTGATTCTGGTCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp ACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTaGGGATTTCTTCAAGGCTGCAATAATGAAAGAACA +
Preference number: 3 (lower is better)
Translates to: TMLRHVGGWIGY*GFLQGCNNERT
Trigger: TGTTCTTTCATTATTGCAGCCTTGAAGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 72 bp CTCTGTAATACCACGTTATTTTCCTTCAGTCTCAGCTaGTGCTTCTTGATTTCCTTGTGTTCCTTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: LCNTTLFSFSLS*CFLISLCSFSS
Trigger: ACTGGAAAAGGAACACAAGGAAATCAAGAAGCAGCAGCTGAGACTGAAGGAAAATAACGTGGTATTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp ATGAAGAATTTCTCCAGCCTTTTATACACAGTAGGGTaGGTCTACAAGGAGTTGCTTACACTTCCAGGTTTA +
Preference number: 3 (lower is better)
Translates to: MKNFSSLLYTVG*VYKELLTLPGL
Trigger: TAAACCTGGAAGTGTAAGCAACTCCTTGTAGACCCACCCTACTGTGTATAAAAGGCTGGAGAAATTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTTGATATTGGCGTATGGTACATCTACTTTCTTCTaGCTTGCCTCACTGGCTACA +
Preference number: 3 (lower is better)
Translates to: KENPNLANLMTCLILAYGTSTFF*LASLAT
Trigger: TGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGT...ACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR-3UTR CAA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAGTTTGAGAAATCAATaGGTTGGACTGGCCATTAAA +
Preference number: 3 (lower is better)
Translates to: QRNYATSCRRMDRLLRISSLRNQ*VGLAIK
Trigger: TTTAATGGCCAGTCCAACCAATTGATTTCTCAAACT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATAGTGTTCATATACCCTaGACTAGAAATTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: LCYANQENVVPQTSEGSNSVHIP*TRNSTS
Trigger: GGAGGTGGAATTTCTAGTCAAGGGTATATGAACACT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp AGGACGAAAAGTGGAATCCAAGCTTTGGCCACGTACTaGAACTTCATTACTTCAATGAAACAGAGCAAATCT +
Preference number: 3 (lower is better)
Translates to: RTKSGIQALATY*NFITSMKQSKS
Trigger: AGATTTGCTCTGTTTCATTGAAGTAATGAAGTTTCAGTACGTGGCCAAAGCTTGGATTCCACTTTTCGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp ATAACACCACTTTCCTCTGAGAAGCCATTGCAAGAATaGGACATTCTTGGAAAATTCTTTGCACAATGCCTG +
Preference number: 3 (lower is better)
Translates to: ITPLSSEKPLQE*DILGKFFAQCL
Trigger: CAGGCATTGTGCAAAGAATTTTCCAAGAATGTCTCATTCTTGCAATGGCTTCTCAGAGGAAAGTGGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 72 bp AAAGACTGCAGAAAAACCAGGAATGAGCCTCATGGATaGTTCATTTCTGAAATCCCATGCTTAACATTCATC +
Preference number: 3 (lower is better)
Translates to: KDCRKTRNEPHG*FISEIPCLTFI
Trigger: GATGAATGTTAAGCATGGGATTTCAGAAATGAAGCATCCATGAGGCTCATTCCTGGTTTTTCTGCAGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp GATTTTTGGAACCTTGATTATAAGCTGCCTGATGTCTaGAACCAAAACTTCTGTAACACTCTATTCCACGTG +
Preference number: 3 (lower is better)
Translates to: DFWNLDYKLPDV*NQNFCNTLFHV
Trigger: CACGTGGAATAGAGTGTTACAGAAGTTTTGGTTCCAGACATCAGGCAGCTTATAATCAAGGTTCCAAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp AATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTTCTTTCATAATTGGAATCCATACTaGTCAGATTCCCAGTTCCAC +
Preference number: 3 (lower is better)
Translates to: NQFLLGNYHMPDTEAFFHNWNPY*SDSQFH
Trigger: GTGGAACTGGGAATCTGACAAGTATGGATTCCAATT...ATGAAAGAAAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR-3UTR CAA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAATCCTTGCATGTCATTaGGTTCTTGTTGCAGTCTTC +
Preference number: 3 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIILACH*VLVAVF
Trigger: GAAGACTGCAACAAGAACCAAATGACATGCAAGGAT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATACTTTGTTGATTAAATaGGGGGAGTCTCTGACAATC +
Preference number: 3 (lower is better)
Translates to: LCYANQENVVPQTSEGSNTLLIK*GESLTI
Trigger: GATTGTCAGAGACTCCCCCAATTTAATCAACAAAGT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATAAACGTTGCATGTTCTaGGAAAATATGGCTAGACCA +
Preference number: 3 (lower is better)
Translates to: LCYANQENVVPQTSEGSNKRCMF*ENMARP
Trigger: TGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR TCA 72 bp TTTAAAATAAGCAGCCCCCACAAAGGGATAATCCATTaGATAAGGAGACAATGTAGCCAAAGAAGGGATTTG +
Preference number: 3 (lower is better)
Translates to: FKISSPHKGIIH*IRRQCSQRRDL
Trigger: CAAATCCCTTCTTTGGCTACATTGTCTCCTTATTCAATGGATTATCCCTTTGTGGGGGCTGCTTATTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACTCATCCACGGAAAATaGAATGTGGTGACTTATACA +
Preference number: 3 (lower is better)
Translates to: VTSYMTQWFEPILNQRELLIHGK*NVVTYT
Trigger: TGTATAAGTCACCACATTCAATTTTCCGTGGATGAG...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR-3UTR CAA 90 bp AGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACAACAAAATGGTGTTGGAATATaGTGTACTGAAGCCAAGCCA +
Preference number: 3 (lower is better)
Translates to: SYMTQWFEPILNQRELQQNGVGI*CTEAKP
Trigger: TGGCTTGGCTTCAGTACACAATATTCCAACACCATT...TTGTTGTAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR TCA 72 bp TTCATTTGTAAAATGGGGAATAACACCACTTTCCTCTaGGAAGCCATTGCAAGAATGAGACATTCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: FICKMGNNTTFL*EAIARMRHSWK
Trigger: TTTCCAAGAATGTCTCATTCTTGCAATGGCTTCTCAGAGGAAAGTGGTGTTATTCCCCATTTTACAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR GCA 72 bp GGGAAAGGAATCAATTTTTATTGGGAAATTACCACATaGCTGACACCGAGGCTTTCTTTCATCTCATTAAAA +
Preference number: 3 (lower is better)
Translates to: GKGINFYWEITT*LTPRLSFISLK
Trigger: TTTTAATGAGATGAAAGAAAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATTCCTTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR CCA 72 bp TCCAAAGTATTGAGTCTAATAATGATTTGGGTCAGGTaGCTAGCCATCACAGTGAGGATAAATTATGTTTAC +
Preference number: 3 (lower is better)
Translates to: SKVLSLIMIWVR*LAITVRINYVY
Trigger: GTAAACATAATTTATCCTCACTGTGATGGCTAGCCACCTGACCCAAATCATTATTAGACTCAATACTTTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR-3UTR CAA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTAGTATTGACAATGGTGTaGGAATATTGTGTACTGAAG +
Preference number: 3 (lower is better)
Translates to: VTSYMTQWFEPILNQRELVLTMV*EYCVLK
Trigger: CTTCAGTACACAATATTCCAACACCATTGTCAATAC...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR TCA 72 bp TATTTCACCATAAGTTTCAACTGCAGCGTGTCATACTaGTATATTTTTATGCCCTCCGAAGTATTTCATGGT +
Preference number: 3 (lower is better)
Translates to: YFTISFNCSVSY*YIFMPSEVFHG
Trigger: ACCATGAAATACTTCGGAGGGCATAAAAATATATCAGTATGACACGCTGCAGTTGAAACTTATGGTGAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR TCA 72 bp TCCTTCTGTTTTCCTCTCTTGGTGAATGCTTACTGCTaGGGTATTATATATTCCAAAGGTATTGAATTTCCA +
Preference number: 3 (lower is better)
Translates to: SFCFPLLVNAYC*GIIYSKGIEFP
Trigger: TGGAAATTCAATACCTTTGGAATATATAATACCTCAGCAGTAAGCATTCACCAAGAGAGGAAAACAGAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CCA 72 bp TCATTTCATATGTCTGTCACTAGCTATATGACACAGTaGTTTGAGCCAATACTAAACCAAAGAGAATTACAA +
Preference number: 3 (lower is better)
Translates to: SFHMSVTSYMTQ*FEPILNQRELQ
Trigger: TTGTAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGACAGACATATGAAATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTCGCACCCACTCCCGCTaGCGCCAACGACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRARTHSR*RQRRCR
Trigger: GCGGCAGCGTCGTTGGCGGCAGCGGGAGTGGGTGCG...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTAGCACCATCCTGCACTaGGCGCCGCTTAAGACGCCG +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASASTILH*APLKTP
Trigger: CGGCGTCTTAAGCGGCGCCCAGTGCAGGATGGTGCT...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTCCTCCAGCACCATCCTaGACTGGGCGCCGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAPPAPS*TGRRLR
Trigger: TCTTAAGCGGCGCCCAGTGCAGGATGGTGCTGGAGG...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCGCACCCACTCCCGCTaGCGCCAACGACGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFRTHSR*RQRRCR
Trigger: GCGGCAGCGTCGTTGGCGGCAGCGGGAGTGGGTGCG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGTGAGCTGTAGGGTATaGCAGGGCCTCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTVSCRV*QGLRWQ
Trigger: CTGCCACCTGAGGCCCTGCCATACCCTACAGCTCAC...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACCGCTCTTCAATAAATaGAGCGCCCTCATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTPLFNK*SALIRR
Trigger: CCTCCTGATGAGGGCGCTGCATTTATTGAAGAGCGG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAATTGGGGGAGATGGCTaGTGCATCTCAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLIGGDG*CISNVG
Trigger: GCCCACATTTGAGATGCAGCAGCCATCTCCCCCAAT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTACTGGCTACAGTCACTaGACAAGGCTTACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASATGYSH*TRLTED
Trigger: GTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGT...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTAAGATGGCTGATACATaGGAACCCCTTTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAKMADT*EPLWLG
Trigger: GCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTT...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAAAGATGGCTGATACATaGGAACCCCTTTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTKMADT*EPLWLG
Trigger: GCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GAATGCCATCCTACCCACCTATATTTTGCCCTGGAGAGGGTGAAAAGGGAAAGGAGGGCAACTTGTCTCTaGCAGGCAAAGTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: ECHPTHLYFALERVKRERRATCL*QAKSQL
Trigger: CAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCT...CCTTTCCCTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTAGGATGGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGCCTTGTGTTCCAAGTaGCTGATACAATGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLALCSK*LIQCLA
Trigger: TGCCAGGCATTGTATCAGGCACTTGGAACACAAGGC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTCAACCGAAGTCACACTaGGCACCCTTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAQPKSH*APLQKM
Trigger: CATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTG...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTCTCGGATTTTAATCTaGACCGCAGGGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTSRILI*TAGLQP
Trigger: CGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTGTGGGCTTAGTATCTTaGAGCAGCACAGAACCAACA +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAVGLVS*SSTEPT
Trigger: TGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCAC...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTAGCACCATTCGCACCTaGCAATATGGCACTAGCAAT +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASASTIRT*QYGTSN
Trigger: ATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGCT...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTTTCCACTGCTGGTTATaGCCCCTGTCTCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISFHCWL*PLSHSC
Trigger: GCAGGAGTGAGACAGGGGTCATAACCAGCAGTGGAA...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACATTGTCAGAAAGTGAGTaGGTGACAACAGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTLSESE*VTTDLR
Trigger: CCTGAGGTCTGTTGTCACTCACTCACTTTCTGACAA...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTGAGGAAAAAGAGAGCTaGCCTCTTAAGGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSEEKES*PLKGRP
Trigger: AGGCCTGCCCTTAAGAGGTCAGCTCTCTTTTTCCTC...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGGATGGATAGGTTACTaGGGATTTCTTCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHGWIGY*GFLQGC
Trigger: GCAGCCTTGAAGAAATCCTCAGTAACCTATCCATCC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCCTCCAGCACCATCCTaGACTGGGCGCCGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFPPAPS*TGRRLR
Trigger: TCTTAAGCGGCGCCCAGTGCAGGATGGTGCTGGAGG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTTCAGGAGGTCATGCTTaGGTCCACTTTTATTCCGTC +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASASGGHA*VHFYSV
Trigger: GACGGAATAAAAGTGGACGCAAGCATGACCTCCTGA...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTGGGGGAGATGGCTGCTaGATCTCAAATGTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAGGDGC*ISNVGL
Trigger: TAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCC...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACATGGGCAAAGGAACTATaGTACGTCATGTCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTWAKEL*YVMSED
Trigger: ATCCTCCGACATGACGTAGCATAGTTCCTTTGCCCA...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAGCACCATCCTGCACTaGGCGCCGCTTAAGACGCCG +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSSTILH*APLKTP
Trigger: CGGCGTCTTAAGCGGCGCCCAGTGCAGGATGGTGCT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTCCCATTTTTAGGCGGTaGTGCATAGCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAPIFRR*CIARQR
Trigger: CCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGG...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAAGTCACTGCACGGCATaGGATTGTCAGCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTSHCTA*DCQPHF
Trigger: AAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATCACCCTTACAGAAGATaGCTGATACATGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHHPYRR*LIHENP
Trigger: GGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTG...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCATTGGAGCACAACTTTaGTGGGGGCAGGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTIGAQL*WGQDPA
Trigger: GGCAGGATCCTGCCCCCACCAAAGTTGTGCTCCAAT...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp AAGGATACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTTCTCGGATTTTAATCTaGACCGCAGGGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KDTRRLVVAISLSGSAVSSRILI*TAGLQP
Trigger: CGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGA...ACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTACTGGCTACAGTCACTaGACAAGGCTTACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSTGYSH*TRLTED
Trigger: GTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTCAATCACTGGTTGGCTaGCAGAATCTAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSQSLVG*QNLGDS
Trigger: GCTGTCACCTAGATTCTGTCAGCCAACCAGTGATTG...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAAACACCACTTTCCTCTaGGAAGCCATTGCAAGAATG +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLNTTFL*EAIARM
Trigger: CATTCTTGCAATGGCTTCTCAGAGGAAAGTGGTGTT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATCAGAAAAACCAGGAATaGGCCTCATGGATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHQKNQE*ASWMLH
Trigger: ATGAAGCATCCATGAGGCTCATTCCTGGTTTTTCTG...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGAGAAGGAAGTGGCCTaGAAAGAGGGCAATAACATT +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLEKEVA*KEGNNI
Trigger: AATGTTATTGCCCTCTTTTCAGGCCACTTCCTTCTC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTCCTCCAGCACCATCCTaGACTGGGCGCCGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSPPAPS*TGRRLR
Trigger: TCTTAAGCGGCGCCCAGTGCAGGATGGTGCTGGAGG...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCGGGGGAGATGGCTGCTaGATCTCAAATGTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTGGDGC*ISNVGL
Trigger: TAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCC...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTATTTTTAGGCGGTGGTaGATAGCCAGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAIFRRW*IARQRK
Trigger: TTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAAT...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATTACTTTCTTCTTGCTTaGCTCACTGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHYFLLA*LTGYSH
Trigger: GTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTA...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGGTGCCTCATTTACATaGTCTTGTAGCACCCTATAC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLGASFT*SCSTLY
Trigger: GTATAGGGTGCTACAAGAGCATGTAAATGAGGCACC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAAGCACCATCCTGCACTaGGCGCCGCTTAAGACGCCG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKSTILH*APLKTP
Trigger: CGGCGTCTTAAGCGGCGCCCAGTGCAGGATGGTGCT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTGTGGAAGGCAACGAGTaGATTCCAGCCACGGCCAAG +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFVEGNE*IPATAK
Trigger: CTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCAC...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATGTGGAAGGCAACGAGTaGATTCCAGCCACGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHVEGNE*IPATAK
Trigger: CTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCAC...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp CCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCCCATTTTTAGGCGGTaGTGCATAGCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSLKECVRRQPGELSCYLPIFRR*CIARQR
Trigger: CCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGG...GAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACATACCACTTTTCAGTTTaGGGATGGAATGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTYHFSV*GWNAFG
Trigger: GCCAAAGGCATTCCATCCCCAAACTGAAAAGTGGTA...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CCATTACACCAGACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACATCTCGGATTTTAATCTaGACCGCAGGGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLHQTFSSGLRCQISLQTSRILI*TAGLQP
Trigger: CGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGA...TGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGGTGTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACTAAGATCACCCCTCTaGAACTCCCTTATATTTGGT +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTLRSPL*NSLIFG
Trigger: ACCAAATATAAGGGAGTTTCAGAGGGGTGATCTTAG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAAGCAGTTTGGGAAATaGTTGTGCTACGCCAATCAA +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHKQFGK*LCYANQ
Trigger: TTGATTGGCGTAGCACAATCATTTCCCAAACTGCTT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAACTACTCATTCACTGTaGCCTTGGGAAACTTACCTA +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTTTHSL*PWETYL
Trigger: TAGGTAAGTTTCCCAAGGTCACAGTGAATGAGTAGT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAACTGTCTCCCATACATaGTTCGTCTTCACTCTAAAC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTTVSHT*FVFTLN
Trigger: GTTTAGAGTGAAGACGAATCATGTATGGGAGACAGT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTAGGCAAGGAACACTGTaGGTCAAAGCTTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSRQGTL*VKASSK
Trigger: TTTGCTGGAAGCTTTGACTCACAGTGTTCCTTGCCT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTGTGTTCCAAGTGCCTaGTACAATGCCTGGCACCTA +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTCVPSA*YNAWHL
Trigger: TAGGTGCCAGGCATTGTATCAGGCACTTGGAACACA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCCGCTCTTCAATAAATaGAGCGCCCTCATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NPSLKECVRRQPGELSCYPLFNK*SALIRR
Trigger: CCTCCTGATGAGGGCGCTGCATTTATTGAAGAGCGG...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTATTGGGGGAGATGGCTaGTGCATCTCAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSIGGDG*CISNVG
Trigger: GCCCACATTTGAGATGCAGCAGCCATCTCCCCCAAT...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATCATTTGGTTCTTGTTaGAGTCTTCTGTGTTCACCC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLSFGSC*SLLCSP
Trigger: GGGTGAACACAGAAGACTGCAACAAGAACCAAATGA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTGTGGAAGGCAACGAGTaGATTCCAGCCACGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSVEGNE*IPATAK
Trigger: CTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCAC...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR CCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTACCCATTTTTAGGCGGTaGTGCATAGCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLPIFRR*CIARQR
Trigger: CCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGG...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCAACCGAAGTCACACTaGGCACCCTTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISQPKSH*APLQKM
Trigger: CATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GAATGCCATCCTACCCACCTATATTTTGCCCTGGAGAGGGTGAAAAGGGAAAGGAGGATGCTGAGAAACTaGATCACTCCATACATTGCT +
Preference number: 4 (lower is better)
Translates to: ECHPTHLYFALERVKRERRMLRN*ITPYIA
Trigger: AGCAATGTATGGAGTGATCCAGTTTCTCAGCATCCT...CCTTTCCCTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTAGGATGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTGCACCAATTACACTGTaGGGGGTTACCAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSAPITL*GVTRTR
Trigger: TCTTGTTCTGGTAACCCCCCACAGTGTAATTGGTGC...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAAAGCTGCCTGATGTCTaGAACCAAAACTTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLKLPDV*NQNFCN
Trigger: GTTACAGAAGTTTTGGTTCCAGACATCAGGCAGCTT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTACCTTCCTTATTACTCTaGCCATCATCTGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLPSLLL*PSSETS
Trigger: ACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGG...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTAGATGTAGCCAAGTATaGCCTAGGAAGGGATCAGTG +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSRCSQV*PRKGSV
Trigger: CACTGATCCCTTCCTAGGCCATACTTGGCTACATCT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAACTCATCAACTCCTCTaGATGAGTTCATCCACTTTC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLTHQLL*MSSSTF
Trigger: GAAAGTGGATGAACTCATCCAGAGGAGTTGATGAGT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GAATGCCATCCTACCCACCTATATTTTGCCCTGGAGAGGGTGAAAAGGGAAAGGATTAGTGCTCTGGAATaGTCAGGGTTTCTAATACCT +
Preference number: 4 (lower is better)
Translates to: ECHPTHLYFALERVKRERISALE*SGFLIP
Trigger: AGGTATTAGAAACCCTGATCATTCCAGAGCACTAAT...CCTTTCCCTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTAGGATGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTCTTACTGAGGACGCTTaGACTTTCTATTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: TGHPYRRWLIHENPFGWALTEDA*TFYFCT
Trigger: TGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAG...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTCTGAACAAGGCTTACTaGGGACGCTTGAACTTTCTA +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSLNKAY*GRLNFL
Trigger: TAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAG...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTACTGGCTACAGTCACTaGACAAGGCTTACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSTGYSH*TRLTED
Trigger: GTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGT...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp CTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATCCTACTGGCTACAGTCACTaGACAAGGCTTACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPDNLQRIHAKIQVECHPTGYSH*TRLTED
Trigger: GTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGT...AGGATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTCCAGAGAATACCCACTaGGGATCCTATTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAPENTH*GSYFCY
Trigger: ATAACAAAAATAGGATCCTCAGTGGGTATTCTCTGG...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTTTCCACTGCTGGTTATaGCCCCTGTCTCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSFHCWL*PLSHSC
Trigger: GCAGGAGTGAGACAGGGGTCATAACCAGCAGTGGAA...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR TCA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTTTTAGTCCAATGAGATaGTGTCAGGAATGTTACTTC +
Preference number: 4 (lower is better)
Translates to: TGHPYRRWLIHENPFGWAFSPMR*CQECYF
Trigger: GAAGTAACATTCCTGACATCATCTCATTGGACTAAA...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGAAAATCTCTGCCAATaGTCTCCATATCAGTTAACC +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHENLCQ*SPYQLT
Trigger: GGTTAACTGATATGGAGATCATTGGCAGAGATTTTC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACCTATATTCAGTCACTaGATCTTGAGTCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTPIFSH*ILSLPL
Trigger: CAAAGGAAGACTCAAGATTCAGTGACTGAATATAGG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTTATAACCTCTTGGCATaGGCTTCAGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSYNLLA*ASEAEI
Trigger: AATCTCTGCCTCTGAAGCTCATGCCAAGAGGTTATA...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTCAGGAGGTCATGCTTaGGTCCACTTTTATTCCGTC +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTSGGHA*VHFYSV
Trigger: GACGGAATAAAAGTGGACGCAAGCATGACCTCCTGA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTGAAATCGCTGAATACTaGTTTGAACTAAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAEIAEY*FELNSW
Trigger: CCACGAGTTTAGTTCAAAGCAGTATTCAGCGATTTC...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTAGGGCAACTTGTCTCTaGCAGGCAAAGTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: LCVSDIKMHFLLAGGSSSRATCL*QAKSQL
Trigger: CAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCT...AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTTCCTTCAGTCTCAGCTaGTGCTTCTTGATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSSFSLS*CFLISL
Trigger: CAAGGAAATCAAGAAGCAGCAGCTGAGACTGAAGGA...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAGTGGAAGGCAACGAGTaGATTCCAGCCACGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIVEGNE*IPATAK
Trigger: CTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCAC...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GATAACCTAACTAAAGATGTAATATTCAAGGGGCGTCCAGGGCGCTTCTGTTCAAGTCACTGCACGGCATaGGATTGTCAGCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: DNLTKDVIFKGRPGRFCSSHCTA*DCQPHF
Trigger: AAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT...TGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACATCTTTAGTTAGGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGTACTGGGGATCAACTaGAATAAGGGAAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLVLGIN*NKGKKI
Trigger: GATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTAC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTATGCAGGACGAAAAGTaGAATCCAAGCTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISMQDEK*NPSFGH
Trigger: GTGGCCAAAGCTTGGATTCCACTTTTCGTCCTGCAT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAAACACACAAAGGCCATaGAAACTTGAGAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLNTQRP*KLEKVK
Trigger: TTTCACCTTCTCAAGTTTCCATGGCCTTTGTGTGTT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAAGTCAGAACAGTCTCTaGTCAATCCTACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTSQNSL*SILLCL
Trigger: TAAGCAAAGTAGGATTGACCAGAGACTGTTCTGACT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAAACGTTGCATGTTCTTaGAAAATATGGCTAGACCAC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTNVACS*KIWLDH
Trigger: GTGGTCTAGCCATATTTTCCAAGAACATGCAACGTT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTACGCAGAGAGCTTTTaGGGTAAGTCTAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTYAESF*GKSRSD
Trigger: GTCTGACCTAGACTTACCCCAAAAGCTCTCTGCGTA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAATTCTTCCCAATTTCTaGTGCCCAAGAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTILPNF*CPRNGN
Trigger: ATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAAT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATCTTACTGAGGACGCTTaGACTTTCTATTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHLTEDA*TFYFCT
Trigger: TGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAG...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GATAACCTAACTAAAGATGTAATATTCAAGGGGCGTCCAGGGCGCTTCTGTTCACTGAACAAGGCTTACTaGGGACGCTTGAACTTTCTA +
Preference number: 4 (lower is better)
Translates to: DNLTKDVIFKGRPGRFCSLNKAY*GRLNFL
Trigger: TAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAG...TGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACATCTTTAGTTAGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAACTCCTGCTGCTGGATaGACTAACATGAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLTPAAG*TNMSTA
Trigger: AGCAGTACTCATGTTAGTTCATCCAGCAGCAGGAGT...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACATTTAGTCCAATGAGATaGTGTCAGGAATGTTACTTC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTFSPMR*CQECYF
Trigger: GAAGTAACATTCCTGACATCATCTCATTGGACTAAA...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTGCTTTGGCCACGTACTaGAACTTCATTACTTCAATG +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSALATY*NFITSM
Trigger: CATTGAAGTAATGAAGTTTCAGTACGTGGCCAAAGC...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTTGGGGTAGCATGGATTaGGACAGGAAGTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSWGSMD*DRKWVQ
Trigger: CTGAACCCACTTCCTGTCTCAATCCATGCTACCCCA...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAAAAGGGATAATCCATTaGATAAGGAGACAATGTAGC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTKGIIH*IRRQCS
Trigger: GCTACATTGTCTCCTTATTCAATGGATTATCCCTTT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGACCACATTAAAGGCTaGCGGATTAATAATCATGAT +
Preference number: 4 (lower is better)
Translates to: MLPFNTSASISRTTYPKHDHIKG*RINNHD
Trigger: ATCATGATTATTAATCCGTCAGCCTTTAATGTGGTC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAACTCCTGGCCTCAAGTaGTTTGCCTGCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSITPGLK*FACLGF
Trigger: GAAGCCAAGGCAGGCAAATCACTTGAGGCCAGGAGT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTGCTCTGGGATGCAAGTaGAAAAAGTTATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISALGCK*KKLSPL
Trigger: CAGAGGTGATAACTTTTTTCACTTGCATCCCAGAGC...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp AAGGATACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTTCAGGAGGTCATGCTTaGGTCCACTTTTATTCCGTC +
Preference number: 4 (lower is better)
Translates to: KDTRRLVVAISLSGSAVSSGGHA*VHFYSV
Trigger: GACGGAATAAAAGTGGACGCAAGCATGACCTCCTGA...ACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp TCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCTCTGAACCGCAGGGCTaGAGCCGCTCTTCAATAAAT +
Preference number: 4 (lower is better)
Translates to: SIFVHGWLDTFIASFFGLSEPQG*SRSSIN
Trigger: ATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGA...GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp GACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACAGGTTCAAGAAAGGGGGAGATGGCTGCTaGATCTCAAATGTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: DFLIWSEMPNFLTNRFKKGGDGC*ISNVGL
Trigger: TAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCC...TTTCTTGAACCTGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACAGGTTCAAGAAAATTGGGGGAGATGGCTaGTGCATCTCAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: DFLIWSEMPNFLTNRFKKIGGDG*CISNVG
Trigger: GCCCACATTTGAGATGCAGCAGCCATCTCCCCCAAT...TTTCTTGAACCTGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTAGGGCAACTTGTCTCTaGCAGGCAAAGTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFRATCL*QAKSQL
Trigger: CAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATATGTGTACAAGTCACTaGACGGCATGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: NPSLKECVRRQPGELSCYMCTSH*TAWDCQ
Trigger: CTGACAATCCCATGCCGTGCAGTGACTTGTACACAT...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGGATTTCTTCAAGGCTaGAATAATGAAAGAACAGTC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTGFLQG*NNERTV
Trigger: GACTGTTCTTTCATTATTGCAGCCTTGAAGAAATCC...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCTCATTAATGGCCCTTaGCCCTGTAAGTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISLINGP*PCKFWS
Trigger: ACTCCAAAACTTACAGGGGCAAGGGCCATTAATGAG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTATCCCCACTGTGCACTaGTCTACCCACCCCTCATTA +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSIPTVH*STHPSL
Trigger: TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGAT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTCTGATGCCCAAGAAATaGAAATTTGGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRALMPKK*KFGLAQ
Trigger: CTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAG...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp GAATGCCATCCTACCCACCTATATTTTGCCCTGGAGAGGGTGAAAAGGGAAAGGATTTTTGTACACGGTTaGCTGGATACTTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: ECHPTHLYFALERVKRERIFVHG*LDTFIA
Trigger: AGCTATGAAAGTATCCAGCCAACCGTGTACAAAAAT...CCTTTCCCTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTAGGATGGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCAACCGAAGTCACACTaGGCACCCTTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFQPKSH*APLQKM
Trigger: CATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTATAGGAGGACAGTACTaGGGATCAACTGGAATAAGG +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISIGGQY*GSTGIR
Trigger: CCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTAT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAAGATTCTACTGGCTTTaGGGAGCTCAGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLRFYWL*GAQKGH
Trigger: ATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCT...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTGGAAAACAGAAAGCGTaGTTCAGTAGACGAAAATGC +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSGKQKA*FSRRKC
Trigger: GCATTTTCGTCTACTGAACCACGCTTTCTGTTTTCC...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAGGAGGTGGTCATAGGTaGGGAAGAAATCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLGGGHR*GRNHAF
Trigger: GAAAGCATGATTTCTTCCCCACCTATGACCACCTCC...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCTGACCCAGATAAGGTaGTCCTCAGTACATAACCTA +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISLTQIR*SSVHNL
Trigger: TAGGTTATGTACTGAGGACCACCTTATCTGGGTCAG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 72 bp CTGCTTTGTGTTTCTGACATAAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLCVSDIKMHFL*AGGSSSSSEEL
Trigger: AAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR CAA 72 bp AGCCTTTTATACACAGTAGGGTGGGTCTACAAGGAGTaGCTTACACTTCCAGGTTTAATACACCTACTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLYTVGWVYKE*LTLPGLIHLLP
Trigger: TGGGAGTAGGTGTATTAAACCTGGAAGTGTAAGCAACTCCTTGTAGACCCACCCTACTGTGTATAAAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATATCTCGGATTTTAATCTaGACCGCAGGGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ILIPHPRKIECGDLYNTISRILI*TAGLQP
Trigger: CGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGA...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp TTCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTAAGATGGCTGATACATaGGAACCCCTTTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: FYFCTRLAGYFHSFFLRSKMADT*EPLWLG
Trigger: GCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTT...AGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp CCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCTTTCTCATCTGGTCTaGGATGCCAAATTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: PSLKECVRRQPGELSCYLLSHLV*DAKFPY
Trigger: GTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAG...GAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTCTGACAGAATCTAGGTaGCAGCTAAGATCACCCCTC +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSLTESR*QLRSPL
Trigger: GAGGGGTGATCTTAGCTGTCACCTAGATTCTGTCAG...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATACAGAAAGTGAGTGAGTaGCAACAGACCTCAGGCACG +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIQKVSE*QQTSGT
Trigger: CGTGCCTGAGGTCTGTTGTCACTCACTCACTTTCTG...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCACTTGGCTGGAAATGCTaGGTGTCTTGGACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNALGWKC*VSWTGL
Trigger: CAGACCAGTCCAAGACACTCAGCATTTCCAGCCAAG...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTGGCTTGAAAAATGGATaGAAAATGCACTCAACCCTT +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSGLKNG*KMHSTL
Trigger: AAGGGTTGAGTGCATTTTTCATCCATTTTTCAAGCC...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTATTGGAGTTCAGAAGGTaGGTATGCTGCCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLLEFRR*VCCLST
Trigger: TGTTGAAAGGCAGCATACTCACCTTCTGAACTCCAA...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp CAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTTTGAAAGAATGTGTTCGTTCAGGAGGTCATGCTTaGGTCCACTTTTATTCCGTC +
Preference number: 4 (lower is better)
Translates to: QEAKKMTLANPSLKECVRSGGHA*VHFYSV
Trigger: GACGGAATAAAAGTGGACGCAAGCATGACCTCCTGA...ACGAACACATTCTTTCAAACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACCGCTCTTCAATAAATaGAGCGCCCTCATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELPLFNK*SALIRR
Trigger: CCTCCTGATGAGGGCGCTGCATTTATTGAAGAGCGG...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTTCTGAACCGCAGGGCTaGAGCCGCTCTTCAATAAAT +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSSEPQG*SRSSIN
Trigger: ATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGA...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR GCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAATTGGGGGAGATGGCTaGTGCATCTCAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKIGGDG*CISNVG
Trigger: GCCCACATTTGAGATGCAGCAGCCATCTCCCCCAAT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAGGGCAACTTGTCTCTaGCAGGCAAAGTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSRATCL*QAKSQL
Trigger: CAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR GCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAATTTTTAGGCGGTGGTaGATAGCCAGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLIFRRW*IARQRK
Trigger: TTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAAT...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATATTTTTAGGCGGTGGTaGATAGCCAGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NPSLKECVRRQPGELSCYIFRRW*IARQRK
Trigger: TTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAAT...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GGGAAAGGAATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTTACTTTCTTCTTGCTTaGCTCACTGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GKGINFYWEITTCLTPRLYFLLA*LTGYSH
Trigger: GTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTA...AAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATTCCTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTGCAAATCTGATGACATaGTTGATATTGGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAANLMT*LILAYG
Trigger: ACCATACGCCAATATCAAGCATGTCATCAGATTTGC...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAACAATCTCGGATCACTaGAAATCCTCCGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSITISDH*KSSASW
Trigger: CCAGGAGGCGGAGGATTTGCAGTGATCCGAGATTGT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTACCTTGATTATAAGCTaGCTGATGTCTGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSTLIIS*LMSGTK
Trigger: TTTGGTTCCAGACATCAGGCAGCTTATAATCAAGGT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAATTTCTGAAATCCCATaGTTAACATTCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLISEIP*LTFITV
Trigger: GACAGTGATGAATGTTAAGCATGGGATTTCAGAAAT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAACTCCACTAACCACTTaGTTCTTGAAATACTCTATT +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTTPLTT*FLKYSI
Trigger: AATAGAGTATTTCAAGAAGCAAGTGGTTAGTGGAGT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTCCCATTTTTAGGCGGTaGTGCATAGCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIPIFRR*CIARQR
Trigger: CCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGG...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACCCATTTTTAGGCGGTaGTGCATAGCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKPIFRR*CIARQR
Trigger: CCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTCTGATGCCCAAGAAATaGAAATTTGGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISLMPKK*KFGLAQ
Trigger: CTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAG...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTTTGAAAGAATGTGTTCGTAGTCACTGCACGGCATaGGATTGTCAGCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: QEAKKMTLANPSLKECVRSHCTA*DCQPHF
Trigger: AAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT...ACGAACACATTCTTTCAAACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp TCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCTCTTGCTTGCCTCACTaGCTACAGTCACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: SIFVHGWLDTFIASFFGLSCLPH*LQSLNK
Trigger: CTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGA...GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp AAGGATACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTAGATGCATTTCCTTTTaGCAGGAGGGTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KDTRRLVVAISLSGSAVSRCISF*QEGLPL
Trigger: AAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCT...ACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATAGATGCATTTCCTTTTaGCAGGAGGGTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NPSLKECVRRQPGELSCYRCISF*QEGLPL
Trigger: AAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCT...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp TCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCCACCCTTACAGAAGATaGCTGATACATGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: SIFVHGWLDTFIASFFGLHPYRR*LIHENP
Trigger: GGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTG...GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp TTCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCAACCGAAGTCACACTaGGCACCCTTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: FYFCTRLAGYFHSFFLRSQPKSH*APLQKM
Trigger: CATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTG...AGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp CTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTATAGGAGGACAGTACTaGGGATCAACTGGAATAAGG +
Preference number: 4 (lower is better)
Translates to: LCVSDIKMHFLLAGGSSSIGGQY*GSTGIR
Trigger: CCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTAT...AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAACCTCAGAGGTTCCCTaGAGTGTTTGGGGTAGCATG +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSITSEVP*SVWGSM
Trigger: CATGCTACCCCAAACACTCCAGGGAACCTCTGAGGT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAACAGTTTTAATGACATaGAATAATGCCTGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLTVLMT*NNACRL
Trigger: CAACCTACAGGCATTATTCCATGTCATTAAAACTGT...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTACTCAGTAGATTCTACTaGCTTTGGGGAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLLSRFY*LWGAQK
Trigger: TTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGAG...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATGGGGTTTTACCAAGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNGVLPS*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACTTGGTAAAACCCC...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGTTTCATTTGTAAAATaGGGAATAACACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTVSFVK*GITPLS
Trigger: GGAAAGTGGTGTTATTCCCCATTTTACAAATGAAAC...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 72 bp AAGATCACAGAACAAGTAAGCGATGGTGTGCCAAAATaGGAATCCATACTTGTCAGATTCCCAGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: KITEQVSDGVPK*ESILVRFPVPH
Trigger: GTGTGGAACTGGGAATCTGACAAGTATGGATTCCAATTTTGGCACACCATCGCTTACTTGTTCTGTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
3UTR CAA 72 bp GCTACTACCCATCAATTGGTAGGATATGTCTATAGCTaGTCAAATAGCAGGTGGGCATGTCTTTCAGACATC +
Preference number: 4 (lower is better)
Translates to: ATTHQLVGYVYS*SNSRWACLSDI
Trigger: GATGTCTGAAAGACATGCCCACCTGCTATTTGACAAGCTATAGACATATCCTACCAATTGATGGGTAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAACTGGCTACAGTCACTaGACAAGGCTTACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKTGYSH*TRLTED
Trigger: GTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAAAGATGGCTGATACATaGGAACCCCTTTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKKMADT*EPLWLG
Trigger: GCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFLTEDG*YMRTPL
Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp CTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTCCTCCTTTAGTCCAATaGGATGATGTCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: LCVSDIKMHFLLAGGSSSPPLVQ*DDVRNV
Trigger: AACATTCCTGACATCATCTCATTGGACTAAAGGAGG...AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTACCTCCTTTAGTCCAATaGGATGATGTCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLPPLVQ*DDVRNV
Trigger: AACATTCCTGACATCATCTCATTGGACTAAAGGAGG...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TTGATCTCATCTACATCAGAACAGTCATTGAGAATTTCCATAAAAAGCCCATCTCCGCTCTTCAATAAATaGAGCGCCCTCATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LISSTSEQSLRISIKSPSPLFNK*SALIRR
Trigger: CCTCCTGATGAGGGCGCTGCATTTATTGAAGAGCGG...AGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGAGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTGGGGGAGATGGCTGCTaGATCTCAAATGTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: AKQFKICLALVIPSEFCIGGDGC*ISNVGL
Trigger: TAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCC...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAAGGGCAACTTGTCTCTaGCAGGCAAAGTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKRATCL*QAKSQL
Trigger: CAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTATTTTTAGGCGGTGGTaGATAGCCAGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFIFRRW*IARQRK
Trigger: TTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAAT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAATGGCTGATGTAAGCTaGCGTACAAGATATACAGAC +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLMADVS*RTRYTD
Trigger: GTCTGTATATCTTGTACGGCAGCTTACATCAGCCAT...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TTCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTATGTGTACAAGTCACTaGACGGCATGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: FYFCTRLAGYFHSFFLRSMCTSH*TAWDCQ
Trigger: CTGACAATCCCATGCCGTGCAGTGACTTGTACACAT...AGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATATGTGTACAAGTCACTaGACGGCATGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNMCTSH*TAWDCQ
Trigger: CTGACAATCCCATGCCGTGCAGTGACTTGTACACAT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCTACTTTCTTCTTGCTTaGCTCACTGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SIFVHGWLDTFIASFFGLYFLLA*LTGYSH
Trigger: GTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTA...GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTACTTTCTTCTTGCTTaGCTCACTGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFYFLLA*LTGYSH
Trigger: GTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTA...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACACACACTCGGGAATTaGTGCGCTAACAGGGTTATC +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKHTLGN*CANRVI
Trigger: GATAACCCTGTTAGCGCAGCAATTCCCGAGTGTGTG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTCATAGTCCAACGCTCTaGACAAAGCACACACTCGGG +
Preference number: 4 (lower is better)
Translates to: AKQFKICLALVIPSEFCIHSPTL*TKHTLG
Trigger: CCCGAGTGTGTGCTTTGTGCAGAGCGTTGGACTATG...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCAGCCTTCTACAGTTATaGCATTTCCCAAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: PSLKECVRRQPGELSCYLSLLQL*HFPKRH
Trigger: ATGTCTCTTTGGGAAATGGCATAACTGTAGAAGGCT...GAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCCAAAATCTGCTCTTCTaGTGGCTCCAAGATATCAAT +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTQNLLF*WLQDIN
Trigger: ATTGATATCTTGGAGCCAGCAGAAGAGCAGATTTTG...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTGAATCAACCTACACTTaGTATCCCTTACATCACATT +
Preference number: 4 (lower is better)
Translates to: ASASTPSLLLWPSSETSSESTYT*YPLHHI
Trigger: AATGTGATGTAAGGGATAGCAAGTGTAGGTTGATTC...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTATTCAGTCTCAGCTGCTaGTTCTTGATTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLFSLSC*FLISLC
Trigger: ACACAAGGAAATCAAGAAGCAGCAGCTGAGACTGAA...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TTAGAAAACCAAGTGGACCAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTCTGATGCCCAAGAAATaGAAATTTGGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LENQVDQEAKKMTLANPSLMPKK*KFGLAQ
Trigger: CTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAG...ACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTGGTCCACTTGGTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp TTAGAAAACCAAGTGGACCAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTTTTCTTCGGTCTCATTaGACACCAAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: LENQVDQEAKKMTLANPSFLRSH*TPRTIF
Trigger: GAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAA...ACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTGGTCCACTTGGTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGTCTTGCTTGCCTCACTaGCTACAGTCACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLSCLPH*LQSLNK
Trigger: CTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGA...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTAGATGCATTTCCTTTTaGCAGGAGGGTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFRCISF*QEGLPL
Trigger: AAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGCACCCTTACAGAAGATaGCTGATACATGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLHPYRR*LIHENP
Trigger: GGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTG...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTGGGATGGAATGCCTTTaGCTCAGTAGATTCTACTGG +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSGMECL*LSRFYW
Trigger: CCAGTAGAATCTACTGAGCCAAAGGCATTCCATCCC...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCTTACTGAGGACGCTTaGACTTTCTATTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: PSLKECVRRQPGELSCYLLTEDA*TFYFCT
Trigger: TGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAG...GAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGCTGAACAAGGCTTACTaGGGACGCTTGAACTTTCTA +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLLNKAY*GRLNFL
Trigger: TAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAG...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp GACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACAGGTTCAAGAAACTGAACAAGGCTTACTaGGGACGCTTGAACTTTCTA +
Preference number: 4 (lower is better)
Translates to: DFLIWSEMPNFLTNRFKKLNKAY*GRLNFL
Trigger: TAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAG...TTTCTTGAACCTGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATCTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNLTEDG*YMRTPL
Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAAGCACCATTCGCACCTaGCAATATGGCACTAGCAAT +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKSTIRT*QYGTSN
Trigger: ATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGCT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGCTGTCACTAGCTATATaGCACAGTGGTTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLLSLAI*HSGLSQ
Trigger: TTGGCTCAAACCACTGTGTCATATAGCTAGTGACAG...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp TTCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCTGGATGAACTAACATaGGTACTGCTTTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: FYFCTRLAGYFHSFFLRSLDELT*VLLSWE
Trigger: CTCCCATGAAAGCAGTACTCATGTTAGTTCATCCAG...AGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATCTGGATGAACTAACATaGGTACTGCTTTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNLDELT*VLLSWE
Trigger: CTCCCATGAAAGCAGTACTCATGTTAGTTCATCCAG...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTTGATTTTAGGAGGCTaGCAATTACAGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: DRCQVFITSGQKILKWLTLILGG*QLQFIS
Trigger: GGAAATGAACTGTAATTGTCAGCCTCCTAAAATCAA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATAGCAAAGTCATCTTCTaGGAAGGAAGTGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNSKVIF*EGSGLK
Trigger: TTTCAGGCCACTTCCTTCTCAGAAGATGACTTTGCT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTTCTGAACCGCAGGGCTaGAGCCGCTCTTCAATAAAT +
Preference number: 4 (lower is better)
Translates to: AKQFKICLALVIPSEFCISEPQG*SRSSIN
Trigger: ATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGA...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp ATCATGGTGATGATTGCACAGCTCTATGTATTTACTAAAATCACTGAATTGTGCTCTGAACCGCAGGGCTaGAGCCGCTCTTCAATAAAT +
Preference number: 4 (lower is better)
Translates to: IMVMIAQLYVFTKITELCSEPQG*SRSSIN
Trigger: ATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGA...GCACAATTCAGTGATTTTAGTAAATACATAGAGCTGTGCAATCATCACCATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTATTTTTAGGCGGTGGTaGATAGCCAGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSIFRRW*IARQRK
Trigger: TTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAAT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR GCA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATATGGCTGATGTAAGCTaGCGTACAAGATATACAGAC +
Preference number: 4 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHMADVS*RTRYTD
Trigger: GTCTGTATATCTTGTACGGCAGCTTACATCAGCCAT...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTATGTGTACAAGTCACTaGACGGCATGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIMCTSH*TAWDCQ
Trigger: CTGACAATCCCATGCCGTGCAGTGACTTGTACACAT...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAATGTGTACAAGTCACTaGACGGCATGGGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKMCTSH*TAWDCQ
Trigger: CTGACAATCCCATGCCGTGCAGTGACTTGTACACAT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp TTCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCATCTACTTTCTTCTTaGTTGCCTCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: FYFCTRLAGYFHSFFLRSHLLSS*LPHWLQ
Trigger: CTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATG...AGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGCATCTACTTTCTTCTTaGTTGCCTCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLHLLSS*LPHWLQ
Trigger: CTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATG...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp GACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACAGGTTCAAGAAACATCTACTTTCTTCTTaGTTGCCTCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: DFLIWSEMPNFLTNRFKKHLLSS*LPHWLQ
Trigger: CTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATG...TTTCTTGAACCTGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTACACTCGGGAATTGCTaGGCTAACAGGGTTATCAAG +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIITLGNC*ANRVIK
Trigger: CTTGATAACCCTGTTAGCGCAGCAATTCCCGAGTGT...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp AATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCTTTTATGGTTCAGTCAGTAATGCCTTCTaGCAGATAACTTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: NVFVDSQENSPVISFYGSVSNAF*QITYRE
Trigger: TTCTCTGTAAGTTATCTGGCAGAAGGCATTACTGAC...TGAACCATAAAAGGAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTTGTCAGGGCAGAATCTaGATAGTGCTTTTAAACATA +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISCQGRI*IVLLNI
Trigger: TATGTTTAAAAGCACTATGCAGATTCTGCCCTGACA...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAGTGGGGAAGAAATCATaGTTTCGGACTGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAVGKKS*FRTVPS
Trigger: AGAAGGGACAGTCCGAAAGCATGATTTCTTCCCCAC...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp AAACATAGGAGGACAGTACTGGGGATCAACTGGAATAAGGGAAAGAAAATCCAATCCTTCAAGAGTTCGTaGATATCGGCGTCTATACAA +
Preference number: 4 (lower is better)
Translates to: KHRRTVLGINWNKGKKIQSFKSS*ISASIQ
Trigger: TTGTATAGACGCCGATATCCACGAACTCTTGAAGGA...TTGGATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCTGATGCCCAAGAAATaGAAATTTGGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFLMPKK*KFGLAQ
Trigger: CTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAAGTCACTGCACGGCATaGGATTGTCAGCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKSHCTA*DCQPHF
Trigger: AAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTTTCTTCGGTCTCATTaGACACCAAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFFLRSH*TPRTIF
Trigger: GAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAA...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp TCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCTTTCTTCGGTCTCATTaGACACCAAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: SIFVHGWLDTFIASFFGLFLRSH*TPRTIF
Trigger: GAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAA...GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTATTTTTGTACACGGTTaGCTGGATACTTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISIFVHG*LDTFIA
Trigger: AGCTATGAAAGTATCCAGCCAACCGTGTACAAAAAT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAATCTTGCTTGCCTCACTaGCTACAGTCACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKSCLPH*LQSLNK
Trigger: CTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGA...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCATCTTGCTTGCCTCACTaGCTACAGTCACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNASCLPH*LQSLNK
Trigger: CTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGA...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp AATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTTCTTTCATTCTTGCTTGCCTCACTaGCTACAGTCACTGAACAAG +
Preference number: 4 (lower is better)
Translates to: NQFLLGNYHMPDTEAFFHSCLPH*LQSLNK
Trigger: CTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGA...ATGAAAGAAAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAGATGCATTTCCTTTTaGCAGGAGGGTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLRCISF*QEGLPL
Trigger: AAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCT...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAGATGCATTTCCTTTTaGCAGGAGGGTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSRCISF*QEGLPL
Trigger: AAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR CCA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATCCAGACTTTCTCATCTaGTCTGAGATGCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHPDFLI*SEMPNF
Trigger: GAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGG...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAATCTGCTCTTCTGCTaGCTCCAAGATATCAATATT +
Preference number: 4 (lower is better)
Translates to: QRNYATSCRRMDRLLRISNLLFC*LQDINI
Trigger: AATATTGATATCTTGGAGCCAGCAGAAGAGCAGATT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTATTCTTCCCAATTTCTaGTGCCCAAGAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: LCVSDIKMHFLLAGGSSSILPNF*CPRNGN
Trigger: ATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAAT...AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp GGGAAAGGAATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTATTCTTCCCAATTTCTaGTGCCCAAGAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: GKGINFYWEITTCLTPRLILPNF*CPRNGN
Trigger: ATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAAT...AAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATTCCTTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR TCA 90 bp TCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTCATTAGTGCTCTGGAATaGTCAGGGTTTCTAATACCT +
Preference number: 4 (lower is better)
Translates to: SIFVHGWLDTFIASFFGLISALE*SGFLIP
Trigger: AGGTATTAGAAACCCTGATCATTCCAGAGCACTAAT...GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACTGAACAAGGCTTACTaGGGACGCTTGAACTTTCTA +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELLNKAY*GRLNFL
Trigger: TAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAG...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKLTEDG*YMRTPL
Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATAAGATGTCTATTTCAATaGCAGCTCTCTGTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ILIPHPRKIECGDLYNTIRCLFQ*QLSVPA
Trigger: AGCGGGGACAGAGAGCTGTCATTGAAATAGACATCT...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp TTGATCTCATCTACATCAGAACAGTCATTGAGAATTTCCATAAAAAGCCCATCTACTCCTGCTGCTGGATaGACTAACATGAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LISSTSEQSLRISIKSPSTPAAG*TNMSTA
Trigger: AGCAGTACTCATGTTAGTTCATCCAGCAGCAGGAGT...AGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGAGATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp TTCTATTTTTGTACACGGTTGGCTGGATACTTTCATAGCTTCTTTCTTCGGTCTAGCAGTTCTGATGAATaGTTCCCAGAATCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: FYFCTRLAGYFHSFFLRSSSSDE*FPESSE
Trigger: CTCACTTGATTCTGGGAATCATTCATCAGAACTGCT...AGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAGCAGTTCTGATGAATaGTTCCCAGAATCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSSSSDE*FPESSE
Trigger: CTCACTTGATTCTGGGAATCATTCATCAGAACTGCT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR TCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAAGATACAGTTATGGTTaGATGTATCTGATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLRYSYG*MYLMLR
Trigger: TCTCAGCATCAGATACATTCAACCATAACTGTATCT...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCACTGGGCACTTCAGTTTaGGAAATCAATTGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNALGTSV*EINWLD
Trigger: GTCCAACCAATTGATTTCTCAAACTGAAGTGCCCAG...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTAAAGCCATTGCAAGAATaGGACATTCTTGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: KRCMFLENMARPPFPYHLKPLQE*DILGKF
Trigger: GAATTTTCCAAGAATGTCTCATTCTTGCAATGGCTT...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATATCAGTGACTGGGGCGTaGCTAGAACATAATACAGAA +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSISVTGA*LEHNTE
Trigger: TTCTGTATTATGTTCTAGTCACGCCCCAGTCACTGA...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTTGATATTGGCGTATGGTATGGCTGATGTAAGCTaGCGTACAAGATATACAGAC +
Preference number: 4 (lower is better)
Translates to: KENPNLANLMTCLILAYGMADVS*RTRYTD
Trigger: GTCTGTATATCTTGTACGGCAGCTTACATCAGCCAT...ACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR GCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGATGGCTGATGTAAGCTaGCGTACAAGATATACAGAC +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLMADVS*RTRYTD
Trigger: GTCTGTATATCTTGTACGGCAGCTTACATCAGCCAT...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTATACTTTCTTCTTGCTTaGCTCACTGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELYFLLA*LTGYSH
Trigger: GTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTA...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACATCTACTTTCTTCTTaGTTGCCTCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELHLLSS*LPHWLQ
Trigger: CTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATG...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATACATCTACTTTCTTCTTaGTTGCCTCACTGGCTACAG +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIHLLSS*LPHWLQ
Trigger: CTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATG...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGCCACCGCACCCAGCTTaGTGTAATTTTTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLPPHPA*CNFSFH
Trigger: ATGAAATGAAAAATTACAGCAAGCTGGGTGCGGTGG...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp TTAGAAAACCAAGTGGACCAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTTCATCTGGTCTGAGATaGCAAATTTCCTTACAAACA +
Preference number: 4 (lower is better)
Translates to: LENQVDQEAKKMTLANPSSSGLR*QISLQT
Trigger: TGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGA...ACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTGGTCCACTTGGTTTTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATAAGTCACTGCACGGCATaGGATTGTCAGCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: ILIPHPRKIECGDLYNTISHCTA*DCQPHF
Trigger: AAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGTTTCTTCGGTCTCATTaGACACCAAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLFLRSH*TPRTIF
Trigger: GAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAA...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp AAGGATACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTATTTTTGTACACGGTTaGCTGGATACTTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: KDTRRLVVAISLSGSAVSIFVHG*LDTFIA
Trigger: AGCTATGAAAGTATCCAGCCAACCGTGTACAAAAAT...ACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTCACCCTTACAGAAGATaGCTGATACATGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: AKQFKICLALVIPSEFCIHPYRR*LIHENP
Trigger: GGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTG...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATATGGTGTGCCAAAATTaGAATCCATACTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: NPSLKECVRRQPGELSCYMVCQN*NPYLSD
Trigger: ATCTGACAAGTATGGATTCCAATTTTGGCACACCAT...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATACTGAGTGTCTTGGACTaGTCTGAAGGAAGAACATCT +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSILSVLD*SEGRTS
Trigger: AGATGTTCTTCCTTCAGACCAGTCCAAGACACTCAG...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTATCATGGGAAAAGCTTaGATAGCCATACGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSIMGKA*IAIRRC
Trigger: ACACCTACGTATGGCTATCCAAGCTTTTCCCATGAT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 72 bp AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTaGATATTGGCGTATGGTGGAATGGTACTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: KENPNLANLMTC*ILAYGGMVLSS
Trigger: ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
3UTR CAA 72 bp TCAGACTCCCAAGTCCACTACTCATTCACTGTGACCTaGGGAAACTTACCTAAACCTGTTTCATTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SDSQVHYSFTVT*GNLPKPVSFVK
Trigger: TTTTACAAATGAAACAGGTTTAGGTAAGTTTCCCAAGGTCACAGTGAATGAGTAGTGGACTTGGGAGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTATTCTTCCCAATTTCTaGTGCCCAAGAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFILPNF*CPRNGN
Trigger: ATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAAT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGATTAGTGCTCTGGAATaGTCAGGGTTTCTAATACCT +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLISALE*SGFLIP
Trigger: AGGTATTAGAAACCCTGATCATTCCAGAGCACTAAT...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCTTACTGAGGACGCTTaGACTTTCTATTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFLTEDA*TFYFCT
Trigger: TGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp TTGATCTCATCTACATCAGAACAGTCATTGAGAATTTCCATAAAAAGCCCATCTCTTACAGAAGATGGCTaGTACATGAGAACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LISSTSEQSLRISIKSPSLTEDG*YMRTPL
Trigger: CAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAG...AGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGAGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR TCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAATGCAGCGTGTCATACTaGTATATTTTTATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKCSVSY*YIFMPS
Trigger: GGAGGGCATAAAAATATATCAGTATGACACGCTGCA...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATACTAATTGTCAGAAAGTaGGTGAGTGACAACAGACCT +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSILIVRK*VSDNRP
Trigger: AGGTCTGTTGTCACTCACTCACTTTCTGACAATTAG...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTACTGTCCCTTCTGTTTaGATTAAGCAGCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSTVPSV*IKQQSH
Trigger: ATGACTTTGCTGCTTAATTCAAACAGAAGGGACAGT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATATCTCAAATACTGGATaGCTGAGACCATTTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNISNTG*LRPFVS
Trigger: GCTTACAAATGGTCTCAGTCATCCAGTATTTGAGAT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTATGGCTGATGTAAGCTaGCGTACAAGATATACAGAC +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIMADVS*RTRYTD
Trigger: GTCTGTATATCTTGTACGGCAGCTTACATCAGCCAT...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGGCAAATCTGATGACATaGTTGATATTGGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLANLMT*LILAYG
Trigger: ACCATACGCCAATATCAAGCATGTCATCAGATTTGC...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR GCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATGCAAATCTGATGACATaGTTGATATTGGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNANLMT*LILAYG
Trigger: ACCATACGCCAATATCAAGCATGTCATCAGATTTGC...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTATTCCGTGAATTTTTATaGTGGCATTCAGAGACACCC +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELFREFL*WHSETP
Trigger: GGGTGTCTCTGAATGCCAGCATAAAAATTCACGGAA...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp ATCATGGTGATGATTGCACAGCTCTATGTATTTACTAAAATCACTGAATTGTGCTACCCACCTATATTTTaGCCTGGAGAGGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: IMVMIAQLYVFTKITELCYPPIF*PGEGEK
Trigger: CTTTTCACCCTCTCCAGGGCAAAATATAGGTGGGTA...GCACAATTCAGTGATTTTAGTAAATACATAGAGCTGTGCAATCATCACCATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAATGAGCCTCATGGATaGTTCATTTCTGAAATCCCA +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSNEPHG*FISEIP
Trigger: TGGGATTTCAGAAATGAAGCATCCATGAGGCTCATT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATAAGTGCCTGATACAATaGCTGGCACCTAATATAATC +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNKCLIQ*LAPNII
Trigger: GATTATATTAGGTGCCAGGCATTGTATCAGGCACTT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAAAAGTTATCACCTCTaGCCTCATGGAGCTTACAAT +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSKSYHL*PHGAYN
Trigger: ATTGTAAGCTCCATGAGGGCAGAGGTGATAACTTTT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTTCCTTCAAGAGTTCGTaGATATCGGCGTCTATACAA +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIISFKSS*ISASIQ
Trigger: TTGTATAGACGCCGATATCCACGAACTCTTGAAGGA...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACTGATGCCCAAGAAATaGAAATTTGGTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKLMPKK*KFGLAQ
Trigger: CTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp CTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATCCTCAAGAACCATCTTCTTaGAATTTGATCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: LPDNLQRIHAKIQVECHPQEPSS*NLISST
Trigger: TGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTG...AGGATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCATTTCTTCGGTCTCATTaGACACCAAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAFLRSH*TPRTIF
Trigger: GAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAA...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTCGTGAATTTTTATGCTaGCATTCAGAGACACCCCGA +
Preference number: 4 (lower is better)
Translates to: AKQFKICLALVIPSEFCIREFLC*HSETPR
Trigger: TCGGGGTGTCTCTGAATGCCAGCATAAAAATTCACG...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTGTACTGGGGATCAACTaGAATAAGGGAAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSVLGIN*NKGKKI
Trigger: GATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTAC...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
3UTR CAA 72 bp ATCCACTTTCATAGTTTCAGTGCTACTACCCATCAATaGGTAGGATATGTCTATAGCTTGTCAAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: IHFHSFSATTHQ*VGYVYSLSNSR
Trigger: CCTGCTATTTGACAAGCTATAGACATATCCTACCAATTGATGGGTAGTAGCACTGAAACTATGAAAGTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTATTAGTGCTCTGGAATaGTCAGGGTTTCTAATACCT +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIISALE*SGFLIP
Trigger: AGGTATTAGAAACCCTGATCATTCCAGAGCACTAAT...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAATTAGTGCTCTGGAATaGTCAGGGTTTCTAATACCT +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSIISALE*SGFLIP
Trigger: AGGTATTAGAAACCCTGATCATTCCAGAGCACTAAT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTTGGAATATTGTGTACTaGAGCCAAGCCACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIWNIVY*SQATQK
Trigger: TTTTTGAGTGGCTTGGCTTCAGTACACAATATTCCA...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATGATGGTGAATCAGGCTaGATCAATCTAAATAACAAC +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNDGESG*INLNNN
Trigger: GTTGTTATTTAGATTGATTCAGCCTGATTCACCATC...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAGAAATCGCTGAATACTaGTTTGAACTAAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAEIAEY*FELNSW
Trigger: CCACGAGTTTAGTTCAAAGCAGTATTCAGCGATTTC...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTAGCAAATCTGATGACATaGTTGATATTGGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELANLMT*LILAYG
Trigger: ACCATACGCCAATATCAAGCATGTCATCAGATTTGC...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAGAAATCGCTGAATACTaGTTTGAACCTCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKEIAEY*FEPQLF
Trigger: GAAGAGTTGAGGTTCAAAGCAGTATTCAGCGATTTC...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545673.5
CDS-3UTR GCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTGACGTGTTTAAATGGTaGACTGCTCTACATTTTTCT +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSDVFKW*TALHFS
Trigger: AGAAAAATGTAGAGCAGTGCACCATTTAAACACGTC...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCAAGAACCATCTTCTTaGAATTTGATCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: APFAPDNMALAIIRQSYFQEPSS*NLISST
Trigger: TGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAGCTATATGACACAGTaGTTTGAGCCAATACTAAAC +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLSYMTQ*FEPILN
Trigger: GTTTAGTATTGGCTCAAACCACTGTGTCATATAGCT...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTGCAAGCATTAAAGAATaGACATTGGGTACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSASIKE*TLGTAL
Trigger: TAAAGCTGTACCCAATGTCCATTCTTTAATGCTTGC...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAATTCTTCCCAATTTCTaGTGCCCAAGAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKILPNF*CPRNGN
Trigger: ATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAAT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR TCA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATATATGACACAGTGGTTTaGGCCAATACTAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: ILIPHPRKIECGDLYNTIYDTVV*ANTKPK
Trigger: CTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATA...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp ATCATGGTGATGATTGCACAGCTCTATGTATTTACTAAAATCACTGAATTGTGCGAAATCGCTGAATACTaGTTTGAACTAAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: IMVMIAQLYVFTKITELCEIAEY*FELNSW
Trigger: CCACGAGTTTAGTTCAAAGCAGTATTCAGCGATTTC...GCACAATTCAGTGATTTTAGTAAATACATAGAGCTGTGCAATCATCACCATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACAAGCATTACAAGGGTaGTGTCTATATAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKQALQG*CLYKTC
Trigger: ACAGGTTTTATATAGACAGCACCCTTGTAATGCTTG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGTGGAACATTTTGTTCTaGTTCAAATGGTATAACCGT +
Preference number: 4 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLWNILF*FKWYNR
Trigger: ACGGTTATACCATTTGAAGCAGAACAAAATGTTCCA...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp TTGTGCTACGCCAATCAAGAAAATGTTGTACCTCAAACATCTGAAGGTAGCAATATTAAATCATTGAGGTaGCTCATTTACATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LCYANQENVVPQTSEGSNIKSLR*LIYMLL
Trigger: CAAGAGCATGTAAATGAGGCACCTCAATGATTTAAT...ATTGCTACCTTCAGATGTTTGAGGTACAACATTTTCTTGATTGGCGTAGCACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTCAAGAACCATCTTCTTaGAATTTGATCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSQEPSS*NLISST
Trigger: TGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTG...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR CCA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAATTTTTGTACACGGTTaGCTGGATACTTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: APDNMALAIIRQSYFSLKIFVHG*LDTFIA
Trigger: AGCTATGAAAGTATCCAGCCAACCGTGTACAAAAAT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCATCAGACGTGTTTAAATaGTGCACTGCTCTACATTTT +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNASDVFK*CTALHF
Trigger: AAAATGTAGAGCAGTGCACCATTTAAACACGTCTGA...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAATTTCTGGCCCTTTTTaGACAAGCTTTTCATCAATC +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAISGPF*TSFSSI
Trigger: GATTGATGAAAAGCTTGTCCAAAAAGGGCCAGAAAT...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR TCA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATACTTACTGAGGACGCTTaGACTTTCTATTTTTGTACA +
Preference number: 4 (lower is better)
Translates to: ILIPHPRKIECGDLYNTILTEDA*TFYFCT
Trigger: TGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAG...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR TCA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTCACACAGAGAAAGTCTaGCATTATGCTTTTATGCAA +
Preference number: 4 (lower is better)
Translates to: AKQFKICLALVIPSEFCIHTEKV*HYAFMQ
Trigger: TTGCATAAAAGCATAATGTCAGACTTTCTCTGTGTG...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTATCCTCTCCCTTCTTATaGCAAACAATTCAAAATTTG +
Preference number: 4 (lower is better)
Translates to: VTSYMTQWFEPILNQRELSSPFL*QTIQNL
Trigger: CAAATTTTGAATTGTTTGGCATAAGAAGGGAGAGGA...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR GCA 90 bp AATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTTCTTTCATAATCATGGTGATGATTaGACAGCTCTATGTATTTAC +
Preference number: 4 (lower is better)
Translates to: NQFLLGNYHMPDTEAFFHNHGDD*TALCIY
Trigger: GTAAATACATAGAGCTGTGCAATCATCACCATGATT...ATGAAAGAAAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR GCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAGACAAAGAATATTTGTaGAACTTTACAGTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNADKEYL*NFTVPV
Trigger: TACTGGCACTGTAAAGTTGCACAAATATTCTTTGTC...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTCAAGAACCATCTTCTTaGAATTTGATCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIQEPSS*NLISST
Trigger: TGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTG...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCACAAGAACCATCTTCTTaGAATTTGATCTCATCTACA +
Preference number: 4 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAQEPSS*NLISST
Trigger: TGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTG...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CCA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATAATTTTTGTACACGGTTaGCTGGATACTTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: ILIPHPRKIECGDLYNTIIFVHG*LDTFIA
Trigger: AGCTATGAAAGTATCCAGCCAACCGTGTACAAAAAT...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CCA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAAATTCTAAACATTTCTaGCCCTTTTTGGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: QIKGNDQAVIRLEVADSINSKHF*PFLDKL
Trigger: AAGCTTGTCCAAAAAGGGCCAGAAATGTTTAGAATT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
3UTR CAA 72 bp TTTATAACGCTAAGTATTGACAATGGTGTTGGAATATaGTGTACTGAAGCCAAGCCACTCAAAAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: FITLSIDNGVGI*CTEAKPLKNAH
Trigger: ATGAGCATTTTTGAGTGGCTTGGCTTCAGTACACAATATTCCAACACCATTGTCAATACTTAGCGTTATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR CAA 72 bp AAATCCTCTCCCTTCTTATGCCAAACAATTCAAAATTaGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: KSSPFLCQTIQN*SSPCNTFRVLH
Trigger: ATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGCATAAGAAGGGAGAGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
3UTR CAA 72 bp GTGCCTCATTTACATGCTCTTGTAGCACCCTATACTTaGTCTTTTACCATTAACATTGTAATCTCCCTATTT +
Preference number: 4 (lower is better)
Translates to: VPHLHALVAPYT*SFTINIVISLF
Trigger: AAATAGGGAGATTACAATGTTAATGGTAAAAGACAAAGTATAGGGTGCTACAAGAGCATGTAAATGAGGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR GCA 90 bp AGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACAACAAAGGTGTGTGTCACTATaGCCAGCTAATTATTATTAT +
Preference number: 4 (lower is better)
Translates to: SYMTQWFEPILNQRELQQRCVSL*PANYYY
Trigger: ATAATAATAATTAGCTGGGCATAGTGACACACACCT...TTGTTGTAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS GCA 90 bp CGCCGCCGCTGCCGCCGCACCCACTCCCGCTGCCGCCAACGACGCTaGCGCCACCACGGCCGCCGCCGCCTCCAGCACCATCCTGCACTG +
Preference number: 5 (lower is better)
Translates to: RRRCRRTHSRCRQRR*RHHGRRRLQHHPAL
Trigger: CAGTGCAGGATGGTGCTGGAGGCGGCGGCGGCCGTGGTGGCGGCAGCGTCGTTGGCGGCAGCGGGAGTGGGTGCGGCGGCAGCGGCGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324794.11
ENST00000545673.5
ENST00000585916.6
ENST00000590127.5
CDS GCA 90 bp CTTCGAAATCCGCCATTTTATACCACCCGCGGGCGCCGCCGCCGCTaGCGCCGCACCCACTCCCGCTGCCGCCAACGACGCTGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: LRNPPFYTTRGRRRR*RRTHSRCRQRRCRH
Trigger: GTGGCGGCAGCGTCGTTGGCGGCAGCGGGAGTGGGTGCGGCGGCAGCGGCGGCGGCGCCCGCGGGTGGTATAAAATGGCGGATTTCGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324794.11
ENST00000398654.7
ENST00000545673.5
ENST00000585916.6
ENST00000586170.1
ENST00000590127.5
CDS-3UTR CAA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAGCCAAGATCGCACCATaGCACTCCATCCCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTAKIAP*HSIPGN
Trigger: GTTGCCCGGGATGGAGTGCAATGGTGCGATCTTGGC...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGGAGACCAGAGTCAGTaGGCCTTAAAGGCCTACCTC +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHGDQSQ*ALKAYL
Trigger: GAGGTAGGCCTTTAAGGCCAACTGACTCTGGTCTCC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTCCTAAACTCGTGGGCTaGATGAGAACATCAAGGACA +
Preference number: 5 (lower is better)
Translates to: TGHPYRRWLIHENPFGWAPKLVG*MRTSRT
Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGG...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATATCAGGAGGTCATGCTaGCGTCCACTTTTATTCCGT +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHIRRSC*RPLLFR
Trigger: ACGGAATAAAAGTGGACGCAAGCATGACCTCCTGAT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACTACTTTCTTCTTGCTaGCCTCACTGGCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTLLSSC*PHWLQS
Trigger: TGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ACTGGGCACCCTTACAGAAGATGGCTGATACATGAGAACCCCTTTGGTTGGGCTACATCTACTTTCTTCTaGCTTGCCTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: TGHPYRRWLIHENPFGWATSTFF*LASLAT
Trigger: TGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGT...AGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTTACATGAGAACCCCTTaGGTTGGGCTGCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAYMRTP*VGLLCV
Trigger: AACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTA...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCAGGCAGGAGAATCGCTaGAACCCTGTAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTRQENR*NPVGGG
Trigger: ACCTCCACCTACAGGGTTCAAGCGATTCTCCTGCCT...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS CCA 90 bp ACAAGATCAGGATGCCCCCATCACAGCTTCTATTCAACATTGTACTaGAGATCCTTGCCGAGTTTTTCTGACCTTGAAGGGCACCTGAAG +
Preference number: 5 (lower is better)
Translates to: TRSGCPHHSFYSTLY*RSLPSFSDLEGHLK
Trigger: CTTCAGGTGCCCTTCAAGGTCAGAAAAACTCGGCAAGGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCCTGATCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592221.5
CDS-3UTR CAA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACATGGATAGTTATCTTCTaGAGGGCAACTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTWIVIF*RATCLC
Trigger: GCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCA...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACTTTCTTCGGTCTCATaGGACACCAAGAACCATCTT +
Preference number: 5 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTLSSVS*DTKNHL
Trigger: AAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCGGACAAGTCAGCTCCTaGGAGCTGCACCAACTCTTA +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTGQVSS*ELHQLL
Trigger: TAAGAGTTGGTGCAGCTCCAAGGAGCTGACTTGTCC...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGGATATGTCTATAGCTaGTCAAATAGCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHGYVYS*SNSRWA
Trigger: TGCCCACCTGCTATTTGACAAGCTATAGACATATCC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACACTCAGCTGCTGCTTCTaGATTTCCTTGTGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTLSCCF*ISLCSF
Trigger: AAAGGAACACAAGGAAATCAAGAAGCAGCAGCTGAG...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTTACATGAGAACCCCTTaGGTTGGGCTGCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAYMRTP*VGLLCV
Trigger: AACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTA...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATATGACATGCTTGATATaGGCGTATGGTGGAATGGTA +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHMTCLI*AYGGMV
Trigger: TACCATTCCACCATACGCCAATATCAAGCATGTCAT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TCAGTAGATTCTACTGGCTTTGGGGAGCTCAGAAAGGCCATAATGGGGCCTACAAATCTGATGACATGCTaGATATTGGCGTATGGTGGA +
Preference number: 5 (lower is better)
Translates to: SVDSTGFGELRKAIMGPTNLMTC*ILAYGG
Trigger: TCCACCATACGCCAATATCAAGCATGTCATCAGATT...TGTAGGCCCCATTATGGCCTTTCTGAGCTCCCCAAAGCCAGTAGAATCTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGAAATAGGAAGCAGTTaGGGAAATGATTGTGCTACG +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHEIGSS*GNDCAT
Trigger: CGTAGCACAATCATTTCCCAAACTGCTTCCTATTTC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTATCATTCACTGTGACCTaGGGAAACTTACCTAAACCT +
Preference number: 5 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLSFTVT*GNLPKP
Trigger: AGGTTTAGGTAAGTTTCCCAAGGTCACAGTGAATGA...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATGCTACTACCCATCAATaGGTAGGATATGTCTATAGC +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHATTHQ*VGYVYS
Trigger: GCTATAGACATATCCTACCAATTGATGGGTAGTAGC...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS GCA 90 bp ATCACTCCATACATTGCTGGTAGGGATGTAAAATGGTACAGCCAGTaGAGTGTTCTTTGTAGTTGCTTCCCAGCATTCATTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: ITPYIAGRDVKWYSQ*SVLCSCFPAFILPL
Trigger: AAGGGGCAGAATGAATGCTGGGAAGCAACTACAAAGAACACTGCACTGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589917.1
CDS CCA 90 bp CTGAGAAACTGGATCACTCCATACATTGCTGGTAGGGATGTAAAATaGTACAGCCAGTGCAGTGTTCTTTGTAGTTGCTTCCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: LRNWITPYIAGRDVK*YSQCSVLCSCFPAF
Trigger: GAATGCTGGGAAGCAACTACAAAGAACACTGCACTGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAGTGATCCAGTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589917.1
CDS-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTACTAAACTCGTGGGCTaGATGAGAACATCAAGGACA +
Preference number: 5 (lower is better)
Translates to: ASASTPSLLLWPSSETSSTKLVG*MRTSRT
Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTTGGATAGTTATCTTCTaGAGGGCAACTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAWIVIF*RATCLC
Trigger: GCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCA...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTACATCTACTTTCTTCTaGCTTGCCTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: ASASTPSLLLWPSSETSSTSTFF*LASLAT
Trigger: TGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTKMHFL*AGGSSS
Trigger: AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTT...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTACATGAGAACCCCTTaGGTTGGGCTGCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTYMRTP*VGLLCV
Trigger: AACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCGAAATGCTGAGTGTCTaGGACTGGTCTGAAGGAAGA +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTEMLSV*DWSEGR
Trigger: TCTTCCTTCAGACCAGTCCAAGACACTCAGCATTTC...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATGCTGCCTTTCAACACCTCAGCATCCATCTCCCGTACCACCTACCCTAAACATAAACGTTGCATGTTCTaGGAAAATATGGCTAGACCA +
Preference number: 5 (lower is better)
Translates to: MLPFNTSASISRTTYPKHKRCMF*ENMARP
Trigger: TGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT...ATGTTTAGGGTAGGTGGTACGGGAGATGGATGCTGAGGTGTTGAAAGGCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTTGGGTCTACAAGGAGTaGCTTACACTTCCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: ASASTPSLLLWPSSETSSWVYKE*LTLPGL
Trigger: TAAACCTGGAAGTGTAAGCAACTCCTTGTAGACCCA...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS CCA 90 bp ACAAGATCAGGATGCCCCCATCACAGCTTCTATTCAACATTGTACTaGAGATCGTGCAGTGTTCTTTGTAGTTGCTTCCCAGCATTCATT +
Preference number: 5 (lower is better)
Translates to: TRSGCPHHSFYSTLY*RSCSVLCSCFPAFI
Trigger: AATGAATGCTGGGAAGCAACTACAAAGAACACTGCACGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCCTGATCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587810.1
CDS-3UTR CAA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATATCAGGAGGTCATGCTaGCGTCCACTTTTATTCCGT +
Preference number: 5 (lower is better)
Translates to: NPSLKECVRRQPGELSCYIRRSC*RPLLFR
Trigger: ACGGAATAAAAGTGGACGCAAGCATGACCTCCTGAT...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTATGACATGCTTGATATaGGCGTATGGTGGAATGGTA +
Preference number: 5 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAMTCLI*AYGGMV
Trigger: TACCATTCCACCATACGCCAATATCAAGCATGTCAT...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp GAGTGCAGAGGCACAATCATAGGTAACTGTAGCCTTTACCTTCTGGCCTCAGCTGGTTGGAATTCTAGATaGTTTACCAAGCATTACAAG +
Preference number: 5 (lower is better)
Translates to: ECRGTIIGNCSLYLLASAGWNSR*FTKHYK
Trigger: CTTGTAATGCTTGGTAAACAATCTAGAATTCCAACC...AGCTGAGGCCAGAAGGTAAAGGCTACAGTTACCTATGATTGTGCCTCTGCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTTACCACTTTTCAGTTaGGGGATGGAATGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTLPLFS*GMECLW
Trigger: CCAAAGGCATTCCATCCCCAAACTGAAAAGTGGTAA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTTGGGGTTTTACCAAGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSWGFTK*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACTTGGTAAAACCCCA...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TACACCTACTCCCATATTATCCCCACTGTGCACTGCTCTACCCACCCCTCATTAGAAATACTCTATTTTTaGGCCTCTGTAATACCACGT +
Preference number: 5 (lower is better)
Translates to: YTYSHIIPTVHCSTHPSLEILYF*ASVIPR
Trigger: ACGTGGTATTACAGAGGCCAAAAAATAGAGTATTTC...TAATGAGGGGTGGGTAGAGCAGTGCACAGTGGGGATAATATGGGAGTAGGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp CATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTTCGTCAGAAGAGCTAAGTCTCAACTGAACTaGGACTGTATAATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HKDAFPFGRRVFLFVRRAKSQLN*DCIISP
Trigger: AGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT...AGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp CTTTGTGTTTCTGACATAAAGATGCATTTCCTTTTGGCAGGAGGGTCTTCCTCTCTTTCTTCGGTCTCATaGGACACCAAGAACCATCTT +
Preference number: 5 (lower is better)
Translates to: LCVSDIKMHFLLAGGSSSLSSVS*DTKNHL
Trigger: AAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAG...AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp ACCCGAAGGCTAGTTGTAGCAATTTCACTATCAGGATCTGCAGTAAGTTTTTCTCTACTTTCTTCTTGCTaGCCTCACTGGCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: TRRLVVAISLSGSAVSFSLLSSC*PHWLQS
Trigger: TGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAG...AGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp TTAGAAAACCAAGTGGACCAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTACATCTACTTTCTTCTaGCTTGCCTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: LENQVDQEAKKMTLANPSTSTFF*LASLAT
Trigger: TGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGT...ACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTGGTCCACTTGGTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFKMHFL*AGGSSS
Trigger: AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp AAACATAGGAGGACAGTACTGGGGATCAACTGGAATAAGGGAAAGAAAATCCAAAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: KHRRTVLGINWNKGKKIQKMHFL*AGGSSS
Trigger: AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTT...TTGGATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHKMHFL*AGGSSS
Trigger: AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTT...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTACCTGGGCACTTCAGTTaGAGAAATCAATTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: KRCMFLENMARPPFPYHLPGHFS*RNQLVG
Trigger: TCCAACCAATTGATTTCTCAAACTGAAGTGCCCAGG...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTCATTTCTGGCCCTTTTaGGACAAGCTTTTCATCAAT +
Preference number: 5 (lower is better)
Translates to: ASASTPSLLLWPSSETSSHFWPF*DKLFIN
Trigger: ATTGATGAAAAGCTTGTCCAAAAAGGGCCAGAAATG...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp AAAGAAAATCCAAACCTGGCAAATCTGATGACATGCTTGATATTGGCGTATGGTATCAGGAGGTCATGCTaGCGTCCACTTTTATTCCGT +
Preference number: 5 (lower is better)
Translates to: KENPNLANLMTCLILAYGIRRSC*RPLLFR
Trigger: ACGGAATAAAAGTGGACGCAAGCATGACCTCCTGAT...ACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp CCATTACACCAGACTTTCTCATCTGGTCTGAGATGCCAAATTTCCTTACAAACAACTAAACTCGTGGGCTaGATGAGAACATCAAGGACA +
Preference number: 5 (lower is better)
Translates to: PLHQTFSSGLRCQISLQTTKLVG*MRTSRT
Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGT...TGTTTGTAAGGAAATTTGGCATCTCAGACCAGATGAGAAAGTCTGGTGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTGGATAGTTATCTTCTaGAGGGCAACTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFWIVIF*RATCLC
Trigger: GCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCA...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATTGGATAGTTATCTTCTaGAGGGCAACTTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHWIVIF*RATCLC
Trigger: GCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCA...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCTTTCTTCGGTCTCATaGGACACCAAGAACCATCTT +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFLSSVS*DTKNHL
Trigger: AAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTACATCTACTTTCTTCTaGCTTGCCTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFTSTFF*LASLAT
Trigger: TGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGTACATGAGAACCCCTTaGGTTGGGCTGCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLYMRTP*VGLLCV
Trigger: AACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTA...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTAATCTGATGACATGCTaGATATTGGCGTATGGTGGA +
Preference number: 5 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSNLMTC*ILAYGG
Trigger: TCCACCATACGCCAATATCAAGCATGTCATCAGATT...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp TTAGAAAACCAAGTGGACCAAGAGGCCAAAAAGATGACACTAGCAAACCCAAGTAATTGGAATCCATACTaGTCAGATTCCCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LENQVDQEAKKMTLANPSNWNPY*SDSQFH
Trigger: GTGGAACTGGGAATCTGACAAGTATGGATTCCAATT...ACTTGGGTTTGCTAGTGTCATCTTTTTGGCCTCTTGGTCCACTTGGTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp AATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCTTTTATGGTTCAGATGGTGTGCCAAAATaGGAATCCATACTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: NVFVDSQENSPVISFYGSDGVPK*ESILVR
Trigger: TCTGACAAGTATGGATTCCAATTTTGGCACACCATC...TGAACCATAAAAGGAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTACTTTGTTGATTAAATaGGGGGAGTCTCTGACAATC +
Preference number: 5 (lower is better)
Translates to: QRNYATSCRRMDRLLRISTLLIK*GESLTI
Trigger: GATTGTCAGAGACTCCCCCAATTTAATCAACAAAGT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTTTGATTTTTGGAACCTaGATTATAAGCTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: ASASTPSLLLWPSSETSSLIFGT*IISCLM
Trigger: CATCAGGCAGCTTATAATCAAGGTTCCAAAAATCAA...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GCTTCAGCATCCACTCCTTCCTTATTACTCTGGCCATCATCTGAAACCAGTTCTACCTCACAGACCAACTaGGATAAATCATCTATAGAA +
Preference number: 5 (lower is better)
Translates to: ASASTPSLLLWPSSETSSTSQTN*DKSSIE
Trigger: TTCTATAGATGATTTATCCAAGTTGGTCTGTGAGGT...AGAACTGGTTTCAGATGATGGCCAGAGTAATAAGGAAGGAGTGGATGCTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCTGCTTCTTGATTTCCTaGTGTTCCTTTTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTCFLIS*CSFSSL
Trigger: AAGACTGGAAAAGGAACACAAGGAAATCAAGAAGCA...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GGGAAAGGAATCAATTTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTAAGTCTCAACTGAACTaGGACTGTATAATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GKGINFYWEITTCLTPRLKSQLN*DCIISP
Trigger: AGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT...AAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAAATTGATTCCTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTCCAAGAACCATCTTCTaGGAATTTGATCTCATCTAC +
Preference number: 5 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSPRTIF*EFDLIY
Trigger: GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGG...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp AAACGTTGCATGTTCTTGGAAAATATGGCTAGACCACCCTTCCCATACCATCTACCAAGAACCATCTTCTaGGAATTTGATCTCATCTAC +
Preference number: 5 (lower is better)
Translates to: KRCMFLENMARPPFPYHLPRTIF*EFDLIY
Trigger: GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGG...TAGATGGTATGGGAAGGGTGGTCTAGCCATATTTTCCAAGAACATGCAACGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TTTTATTGGGAAATTACCACATGCCTGACACCGAGGCTTTCTTTCATCTCATTACTTTCTTCGGTCTCATaGGACACCAAGAACCATCTT +
Preference number: 5 (lower is better)
Translates to: FYWEITTCLTPRLSFISLLSSVS*DTKNHL
Trigger: AAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAG...TAATGAGATGAAAGAAAGCCTCGGTGTCAGGCATGTGGTAATTTCCCAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCAAATCTGATGACATGCTTGATATTGGCGTATGGTGGAATGGTACTGAGTAGTTATTTTTGTACACGGTaGGCTGGATACTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: ANLMTCLILAYGGMVLSSYFCTR*AGYFHS
Trigger: GCTATGAAAGTATCCAGCCAACCGTGTACAAAAATA...ACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398654.7
CDS-3UTR CAA 90 bp AATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCTTTTATGGTTCATATTTTTGTACACGGTaGGCTGGATACTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: NVFVDSQENSPVISFYGSYFCTR*AGYFHS
Trigger: GCTATGAAAGTATCCAGCCAACCGTGTACAAAAATA...TGAACCATAAAAGGAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACTACTTTCTTCTTGCTaGCCTCACTGGCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKLLSSC*PHWLQS
Trigger: TGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAAAGATGCATTTCCTTTaGGCAGGAGGGTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKKMHFL*AGGSSS
Trigger: AGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTAATCTGATGACATGCTaGATATTGGCGTATGGTGGA +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFNLMTC*ILAYGG
Trigger: TCCACCATACGCCAATATCAAGCATGTCATCAGATT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCGCTGAATACTGCTTaGAACCTCAACTCTTCGAAA +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFSLNTA*NLNSSK
Trigger: TTTCGAAGAGTTGAGGTTCAAAGCAGTATTCAGCGA...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545673.5
CDS-3UTR CAA 90 bp AACCCAAGTTTGAAAGAATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATAAATTAACAAACCCTTaGGTTGGGCTGCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: NPSLKECVRRQPGELSCYKLTNP*VGLLCV
Trigger: AACACAAAGCAGCCCAACCAAAGGGTTTGTTAATTT...ATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATTCTTTCAAACTTGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp AATGTGTTCGTAGACAGCCAGGAGAACTCTCCTGTTATCTCCTTTTATGGTTCACTAGCAAACCCAAGTTaGAAAGAATGTGTTCGTAGA +
Preference number: 5 (lower is better)
Translates to: NVFVDSQENSPVISFYGSLANPS*KECVRR
Trigger: TCTACGAACACATTCTTTCAAACTTGGGTTTGCTAG...TGAACCATAAAAGGAGATAACAGGAGAGTTCTCCTGGCTGTCTACGAACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTAAGATACAGTTATGGTaGAATGTATCTGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: QRNYATSCRRMDRLLRISKIQLW*NVSDAE
Trigger: CTCAGCATCAGATACATTCAACCATAACTGTATCTT...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GACAGATGCCAAGTTTTTATAACTTCAGGCCAGAAAATCCTCAAGTGGCTCACCAGTTTGAGAAATCAATaGGTTGGACTGGCCATTAAA +
Preference number: 5 (lower is better)
Translates to: DRCQVFITSGQKILKWLTSLRNQ*VGLAIK
Trigger: TTTAATGGCCAGTCCAACCAATTGATTTCTCAAACT...GGTGAGCCACTTGAGGATTTTCTGGCCTGAAGTTATAAAAACTTGGCATCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp CAAAGGAACTATGCTACGTCATGTCGGAGGATGGATAGGTTACTGAGGATTTCTTCTGACAAAGAATATTaGTGCAACTTTACAGTGCCA +
Preference number: 5 (lower is better)
Translates to: QRNYATSCRRMDRLLRISSDKEY*CNFTVP
Trigger: TGGCACTGTAAAGTTGCACAAATATTCTTTGTCAGA...AGAAATCCTCAGTAACCTATCCATCCTCCGACATGACGTAGCATAGTTCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATAATCAGGAGGTCATGCTaGCGTCCACTTTTATTCCGT +
Preference number: 5 (lower is better)
Translates to: ILIPHPRKIECGDLYNTIIRRSC*RPLLFR
Trigger: ACGGAATAAAAGTGGACGCAAGCATGACCTCCTGAT...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATATGTGGGCTTAGTATCTaGAAGCAGCACAGAACCAAC +
Preference number: 5 (lower is better)
Translates to: ILIPHPRKIECGDLYNTICGLSI*KQHRTN
Trigger: GTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACA...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAACTAAACTCGTGGGCTaGATGAGAACATCAAGGACA +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKTKLVG*MRTSRT
Trigger: TGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTAAGTCTCAACTGAACTaGGACTGTATAATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFKSQLN*DCIISP
Trigger: AGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp GCACCATTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTCCAAGAACCATCTTCTaGGAATTTGATCTCATCTAC +
Preference number: 5 (lower is better)
Translates to: APFAPDNMALAIIRQSYFPRTIF*EFDLIY
Trigger: GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGG...AAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp CTTCTGCCAGATAACTTACAGAGAATCCACGCTAAAATTCAGGTAGAATGCCATCCAAGAACCATCTTCTaGGAATTTGATCTCATCTAC +
Preference number: 5 (lower is better)
Translates to: LLPDNLQRIHAKIQVECHPRTIF*EFDLIY
Trigger: GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGG...ATGGCATTCTACCTGAATTTTAGCGTGGATTCTCTGTAAGTTATCTGGCAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAACTTTCTTCGGTCTCATaGGACACCAAGAACCATCTT +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKLSSVS*DTKNHL
Trigger: AAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAG...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATACTACTTTCTTCTTGCTaGCCTCACTGGCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: ILIPHPRKIECGDLYNTILLSSC*PHWLQS
Trigger: TGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAG...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp ATCATGGTGATGATTGCACAGCTCTATGTATTTACTAAAATCACTGAATTGTGCCTACTTTCTTCTTGCTaGCCTCACTGGCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: IMVMIAQLYVFTKITELCLLSSC*PHWLQS
Trigger: TGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAG...GCACAATTCAGTGATTTTAGTAAATACATAGAGCTGTGCAATCATCACCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592212.5
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAACATCTACTTTCTTCTaGCTTGCCTCACTGGCTACA +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKTSTFF*LASLAT
Trigger: TGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATATTGCCTAGGTTGGTTTaGAACTCCAGAGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: ILIPHPRKIECGDLYNTILPRLV*NSRAQV
Trigger: CACTTGAGCTCTGGAGTTCAAAACCAACCTAGGCAA...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp AGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACAACAAGCTATGTTGCCTAGGTaGGTTTTGAACTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SYMTQWFEPILNQRELQQAMLPR*VLNSRA
Trigger: AGCTCTGGAGTTCAAAACCAACCTAGGCAACATAGC...TTGTTGTAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTATCCTTGCATGTCATTaGGTTCTTGTTGCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSILACH*VLVAVF
Trigger: GAAGACTGCAACAAGAACCAAATGACATGCAAGGAT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS CCA 90 bp TTTCTAGGAGGTCTCATATCTCATATTTCCAGTGATAACATTATTTaGCAAAGGATGTTAATGCAACTGGCTCTATGGGCAGAATGGCTA +
Preference number: 5 (lower is better)
Translates to: FLGGLISHISSDNII*QRMLMQLALWAEWL
Trigger: TAGCCATTCTGCCCATAGAGCCAGTTGCATTAACATCCTTTGCCAAATAATGTTATCACTGGAAATATGAGATATGAGACCTCCTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586170.1
CDS-3UTR CAA 90 bp TTCGCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAGTCTCAACTGAACTaGGACTGTATAATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: FAPDNMALAIIRQSYFSLKSQLN*DCIISP
Trigger: AGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT...CAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTAAGTCTCAACTGAACTaGGACTGTATAATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSKSQLN*DCIISP
Trigger: AGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398654.7
ENST00000585916.6
CDS-3UTR CAA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTATGACATGCTTGATATaGGCGTATGGTGGAATGGTA +
Preference number: 5 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIMTCLI*AYGGMV
Trigger: TACCATTCCACCATACGCCAATATCAAGCATGTCAT...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAAATGACATGCTTGATATaGGCGTATGGTGGAATGGTA +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKMTCLI*AYGGMV
Trigger: TACCATTCCACCATACGCCAATATCAAGCATGTCAT...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATAAGTGTTCATATACCCTaGACTAGAAATTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: QIKGNDQAVIRLEVADSISVHIP*TRNSTS
Trigger: GGAGGTGGAATTTCTAGTCAAGGGTATATGAACACT...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAATCTTGAGTCTTCCTTaGAAATGGCTTCAGCATCCA +
Preference number: 5 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAILSLP*KWLQHP
Trigger: TGGATGCTGAAGCCATTTCAAAGGAAGACTCAAGAT...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp TTCAACATCAGTTCACCTAGACCTCCCTGTGTGACTAAACTCTCTTTAATTATTCCAAGAACCATCTTCTaGGAATTTGATCTCATCTAC +
Preference number: 5 (lower is better)
Translates to: FNISSPRPPCVTKLSLIIPRTIF*EFDLIY
Trigger: GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGG...AATAATTAAAGAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GTCACTAGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTATATTTTTGTACACGGTaGGCTGGATACTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: VTSYMTQWFEPILNQRELYFCTR*AGYFHS
Trigger: GCTATGAAAGTATCCAGCCAACCGTGTACAAAAATA...TAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp GCACCTGACAATATGGCACTAGCAATAATAAGGCAGTCATATTTTTCCTTGAAATATTTTTGTACACGGTaGGCTGGATACTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: APDNMALAIIRQSYFSLKYFCTR*AGYFHS
Trigger: GCTATGAAAGTATCCAGCCAACCGTGTACAAAAATA...TTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324794.11
ENST00000545673.5
CDS-3UTR CAA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCATATTTTTGTACACGGTaGGCTGGATACTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNAYFCTR*AGYFHS
Trigger: GCTATGAAAGTATCCAGCCAACCGTGTACAAAAATA...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp AGCTATATGACACAGTGGTTTGAGCCAATACTAAACCAAAGAGAATTACAACAAAATCTGATGACATGCTaGATATTGGCGTATGGTGGA +
Preference number: 5 (lower is better)
Translates to: SYMTQWFEPILNQRELQQNLMTC*ILAYGG
Trigger: TCCACCATACGCCAATATCAAGCATGTCATCAGATT...TTGTTGTAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp CTAGAGATCCAAGAAAAAGCAGTTCTGATGAATGATTCCCAGAATCAAGTGAGTCCAATCAAGAAAATGTaGTACCTCAAACATCTGAAG +
Preference number: 5 (lower is better)
Translates to: LEIQEKAVLMNDSQNQVSPIKKM*YLKHLK
Trigger: CTTCAGATGTTTGAGGTACAACATTTTCTTGATTGG...ACTCACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS CCA 90 bp AGAGCTTTTACCTTCCCAATTTCTGATGCCCAAGAAATGGAAATTTaGTTTGGCACAGCTGAAGATAACCTAACTAAAGATGTAATATTC +
Preference number: 5 (lower is better)
Translates to: RAFTFPISDAQEMEI*FGTAEDNLTKDVIF
Trigger: GAATATTACATCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGGTAAAAGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589819.1
CDS-3UTR CAA 90 bp ATATTGATACCTCATCCACGGAAAATTGAATGTGGTGACTTATACAACACCATACTCATCCACGGAAAATaGAATGTGGTGACTTATACA +
Preference number: 5 (lower is better)
Translates to: ILIPHPRKIECGDLYNTILIHGK*NVVTYT
Trigger: TGTATAAGTCACCACATTCAATTTTCCGTGGATGAG...TATGGTGTTGTATAAGTCACCACATTCAATTTTCCGTGGATGAGGTATCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS-3UTR CAA 90 bp CAAATCAAAGGGAATGATCAGGCAGTTATAAGACTAGAGGTAGCTGATAGTATATGCATAGTTTCTTTTTaGAGAAGGCAAGCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: QIKGNDQAVIRLEVADSICIVSF*RRQASN
Trigger: ATTTGAGGCTTGCCTTCTCAAAAAAGAAACTATGCA...TATACTATCAGCTACCTCTAGTCTTATAACTGCCTGATCATTCCCTTTGATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp ATAGTGCCATTAACATCCAAGTTACCCAGGCTTGAAAAATGGATGAAAAATGCAAGCAACCACTGTATCTaGAGATATGTAGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: IVPLTSKLPRLEKWMKNASNHCI*RYVECE
Trigger: TTCACATTCTACATATCTCAAGATACAGTGGTTGCT...TGCATTTTTCATCCATTTTTCAAGCCTGGGTAACTTGGATGTTAATGGCACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585916.6
CDS-3UTR CAA 90 bp GCCAAACAATTCAAAATTTGTCTAGCCCTTGTAATACCTTCAGAGTTTTGCATTGTATTGACAATGGTGTaGGAATATTGTGTACTGAAG +
Preference number: 5 (lower is better)
Translates to: AKQFKICLALVIPSEFCIVLTMV*EYCVLK
Trigger: CTTCAGTACACAATATTCCAACACCATTGTCAATAC...AATGCAAAACTCTGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324794.11
CDS GCA 72 bp GCAAGATCAAACGTTGCTTCCCACATCGGCCCTCACTaGGAACCGGGATGTCGGGTCCCCATGTGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: ARSNVASHIGPH*EPGCRVPMCPS
Trigger: GGAGGGGCACATGGGGACCCGACATCCCGGTTCGCAGTGAGGGCCGATGTGGGAAGCAACGTTTGATCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586953.1
CDS CAA 90 bp ATAGCCACAGACACGTACACCCCGGTGAAGGTGCAAGATCAAACGTaGCTTCCCACATCGGCCCTCACTGCGAACCGGGATGTCGGGTCC +
Preference number: 6 (lower is better)
Translates to: IATDTYTPVKVQDQT*LPTSALTANRDVGS
Trigger: GGACCCGACATCCCGGTTCGCAGTGAGGGCCGATGTGGGAAGCAACGTTTGATCTTGCACCTTCACCGGGGTGTACGTGTCTGTGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586953.1
CDS CAA 72 bp GACACGTACACCCCGGTGAAGGTGCAAGATCAAACGTaGCTTCCCACATCGGCCCTCACTGCGAACCGGGAT +
Preference number: 6 (lower is better)
Translates to: DTYTPVKVQDQT*LPTSALTANRD
Trigger: ATCCCGGTTCGCAGTGAGGGCCGATGTGGGAAGCAACGTTTGATCTTGCACCTTCACCGGGGTGTACGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586953.1
CDS TCA 72 bp GATGGCTGCTGCATCTCAAATGTGGGCTTAGTATCTTaGAGCAGCACAGAACCAACAGGAGAGGATGGTGAG +
Preference number: 6 (lower is better)
Translates to: DGCCISNVGLVS*SSTEPTGEDGE
Trigger: CTCACCATCCTCTCCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324794.11
ENST00000398654.7
ENST00000585916.6
ENST00000590127.5
ENST00000592011.5
ENST00000592212.5
CDS CCA 72 bp GGATGCCCCCATCACAGCTTCTATTCAACATTGTACTaGAGATCCTTGCCGAGTTTTTCTGACCTTGAAGGG +
Preference number: 6 (lower is better)
Translates to: GCPHHSFYSTLY*RSLPSFSDLEG
Trigger: CCCTTCAAGGTCAGAAAAACTCGGCAAGGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592221.5
CDS CAA 72 bp AGATCAGGATGCCCCCATCACAGCTTCTATTCAACATaGTACTGGAGATCCCTCAACTCTTCGAAATCCGCC +
Preference number: 6 (lower is better)
Translates to: RSGCPHHSFYST*YWRSLNSSKSA
Trigger: GGCGGATTTCGAAGAGTTGAGGGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCCTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586634.1
CDS CAA 72 bp TCCTATACATGGGTTCTGCAGGGCCAACTTCAGGACTaGAGTACACATGATTTTCCTGTTGGGAGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: SYTWVLQGQLQD*STHDFPVGRVD
Trigger: ATCCACCCTCCCAACAGGAAAATCATGTGTACTCAAGTCCTGAAGTTGGCCCTGCAGAACCCATGTATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590944.1
CDS TCA 72 bp GGATATCGGCGTCTATACAATTCTCGGATTTTAATCTaGACCGCAGGGCTGCAGCCGCTCTTCAATAAATGC +
Preference number: 6 (lower is better)
Translates to: GYRRLYNSRILI*TAGLQPLFNKC
Trigger: GCATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000324794.11
ENST00000398654.7
ENST00000585916.6
ENST00000586953.1
ENST00000589917.1
ENST00000590127.5
ENST00000592011.5
ENST00000592212.5
CDS CCA 72 bp TGGATCACTCCATACATTGCTGGTAGGGATGTAAAATaGTACAGCCATTTGGAGAGAGGGATCCTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: WITPYIAGRDVK*YSHLERGILVV
Trigger: CACCACAAGGATCCCTCTCTCCAAATGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAGTGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592221.5
CDS CCA 72 bp GGATGCCCCCATCACAGCTTCTATTCAACATTGTACTaGAGATCGTGCAGTGTTCTTTGTAGTTGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GCPHHSFYSTLY*RSCSVLCSCFP
Trigger: TGGGAAGCAACTACAAAGAACACTGCACGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587810.1
CDS CCA 72 bp GGATGCCCCCATCACAGCTTCTATTCAACATTGTACTaGAGATCCCTCAACTCTTCGAAATCCGCCATTTTA +
Preference number: 6 (lower is better)
Translates to: GCPHHSFYSTLY*RSLNSSKSAIL
Trigger: TAAAATGGCGGATTTCGAAGAGTTGAGGGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586634.1
CDS CAA 72 bp AGATCAGGATGCCCCCATCACAGCTTCTATTCAACATaGTACTGGAGATCCTTGCCGAGTTTTTCTGACCTT +
Preference number: 6 (lower is better)
Translates to: RSGCPHHSFYST*YWRSLPSFSDL
Trigger: AAGGTCAGAAAAACTCGGCAAGGATCTCCAGTACAATGTTGAATAGAAGCTGTGATGGGGGCATCCTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592221.5
CDS CAA 72 bp TACATTGCTGGTAGGGATGTAAAATGGTACAGCCATTaGGAGAGAGGGATCCTTGTGGTGATAAAATGGTCT +
Preference number: 6 (lower is better)
Translates to: YIAGRDVKWYSH*ERGILVVIKWS
Trigger: AGACCATTTTATCACCACAAGGATCCCTCTCTCCAAATGGCTGTACCATTTTACATCCCTACCAGCAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592221.5
CDS CCA 72 bp GGTCTCATATCTCATATTTCCAGTGATAACATTATTTaGCAAAGGATGTTAATGCAACTGGCTCTATGGGCA +
Preference number: 6 (lower is better)
Translates to: GLISHISSDNII*QRMLMQLALWA
Trigger: TGCCCATAGAGCCAGTTGCATTAACATCCTTTGCCAAATAATGTTATCACTGGAAATATGAGATATGAGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586170.1
CDS TCA 72 bp AGAGGGATCCTTGTGGTGATAAAATGGTCTATATCTTaGTTGTGTTCATGTCAATATCCTGGTTGTGATACT +
Preference number: 6 (lower is better)
Translates to: RGILVVIKWSIS*LCSCQYPGCDT
Trigger: AGTATCACAACCAGGATATTGACATGAACACAATCAAGATATAGACCATTTTATCACCACAAGGATCCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592221.5
CDS CCA 72 bp AACAGAATACATATACAGAAACAGAATACAGTTGACTaGTTTGAACTGTGCAGGTCCACTTATACGCATATT +
Preference number: 6 (lower is better)
Translates to: NRIHIQKQNTVD*FELCRSTYTHI
Trigger: AATATGCGTATAAGTGGACCTGCACAGTTCAAACCAGTCAACTGTATTCTGTTTCTGTATATGTATTCTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590944.1