RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIANP (Homo sapiens)

Ensembl gene IDs: ENSG00000139200

Ensembl transcript IDs: ENST00000320591.9, ENST00000534837.6, ENST00000540656.5, ENST00000542740.1, ENST00000545917.5

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCAC +
Preference number: 1 (lower is better)
Translates to: SHPPLEQHAGAAETR*VGVHEGESEHAAHH
Trigger: GTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR CCA 90 bp ACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACA +
Preference number: 1 (lower is better)
Translates to: THLWSSTQGLRKRGG*VFMRERVSTPHTTT
Trigger: TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 90 bp GTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAGGGCGAGCAGATAGGATTGCCCGTG +
Preference number: 1 (lower is better)
Translates to: VSAQGWGQGPEVTDM*GPHLQEGEQIGLPV
Trigger: CACGGGCAATCCTATCTGCTCGCCCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 90 bp GATGGGGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGAGCCCCCAGCTCACCTCCCACCCAC +
Preference number: 1 (lower is better)
Translates to: DGETEKQMVWNGTRP*PMRAQGAPSSPPTH
Trigger: GTGGGTGGGAGGTGAGCTGGGGGCTCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 90 bp AGGCCCAAAGGGAGGCTGGGAAGGGAGGACTGGCTCAGGGGGCTCTaGAGTCCAGAGAATGGCACACACACAGACAGCCAGGACAGACAA +
Preference number: 1 (lower is better)
Translates to: RPKGRLGREDWLRGL*SPENGTHTDSQDRQ
Trigger: TTGTCTGTCCTGGCTGTCTGTGTGTGTGCCATTCTCTGGACTTCAGAGCCCCCTGAGCCAGTCCTCCCTTCCCAGCCTCCCTTTGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR CCA 90 bp AGCGGAGCGGTATGGACGGGGAGAGGGTGCAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTGAGTGTGCAAGGCTTTCATGTGAGT +
Preference number: 1 (lower is better)
Translates to: SGAVWTGRGCRSVCK*PVKVEVSVQGFHVS
Trigger: ACTCACATGAAAGCCTTGCACACTCACCTCCACCTTCACAGGCCATTTGCACACGCTCCTGCACCCTCTCCCCGTCCATACCGCTCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 90 bp GAAGGAGAGAGTGCAAATGTGAGACGAGAGAACATGAGAGTCAGCTaGGCGGAGCGGTATGGACGGGGAGAGGGTGCAGGAGCGTGTGCA +
Preference number: 1 (lower is better)
Translates to: EGESANVRRENMRVS*AERYGRGEGAGACA
Trigger: TGCACACGCTCCTGCACCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTCACATTTGCACTCTCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 90 bp GGGCAGAGTTGGAGTTATGGGCAGCAGAGAATAGGACACAGATCCTaGGAGACTGGGAGAAGGAAGGGTGCCTCCCAGAGAGGAGCTGGT +
Preference number: 1 (lower is better)
Translates to: GQSWSYGQQRIGHRS*ETGRRKGASQRGAG
Trigger: ACCAGCTCCTCTCTGGGAGGCACCCTTCCTTCTCCCAGTCTCTCAGGATCTGTGTCCTATTCTCTGCTGCCCATAACTCCAACTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR CCA 90 bp AAATGTGAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATaGACGGGGAGAGGGTGCAGGAGCGTGTGCAAATGGCCTGTGAAG +
Preference number: 1 (lower is better)
Translates to: KCETREHESQLSGAV*TGRGCRSVCKWPVK
Trigger: CTTCACAGGCCATTTGCACACGCTCCTGCACCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTCACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCCACCCTCAGTGGGATaGGGGCTGTGCCGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWPPSVG*GLCRPL
Trigger: AAGGGGCCGGCACAGCCCCCATCCCACTGAGGGTGG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCCCCCACCCCAGCTCTaGAGACCTAAGTTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWPPPQL*RPKLPS
Trigger: GGAAGGCAACTTAGGTCTTCAGAGCTGGGGTGGGGG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR GCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGCAGCACGCAGGGGCTaGGGAAACGAGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEAARRG*GNEVGG
Trigger: CCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGCTGTGCCGGCCCCTTaGCCTCCTGCTTGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEAVPAP*PPAWLH
Trigger: GTGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAGGGGAGTGTTCCGGGTaGTGTGCAAGGGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GRADRIARGAGECSGWCAGECSG*CARGRS
Trigger: GCTCCTGCCCCTTGCACACCACCCGGAACACTCCCC...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCACTCCCAGAGAGGAGCTaGTCCAGCCCCCTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: GRADRIARGAGECSGWCALPERS*SSPLGR
Trigger: CCTCCCAAGGGGGCTGGACCAGCTCCTCTCTGGGAG...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR GCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGTGGGATGGGGGCTGTaGCGGCCCCTTGGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ETREHESQLSGAVWTGRGVGWGL*RPLGLL
Trigger: CAGGAGGCCAAGGGGCCGGCACAGCCCCCATCCCAC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGCAGCACGCAGGGGCTaGGGAAACGAGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGAARRG*GNEVGG
Trigger: CCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCTGTGCCGGCCCCTTaGCCTCCTGCTTGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: AGAAETRWVGVHEGESEHAVPAP*PPAWLH
Trigger: GTGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGCTGTGCCGGCCCCTTaGCCTCCTGCTTGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRAVPAP*PPAWLH
Trigger: GTGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGACCACCCTCAGTGGGATaGGGGCTGTGCCGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERPPSVG*GLCRPL
Trigger: AAGGGGCCGGCACAGCCCCCATCCCACTGAGGGTGG...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGACCTCCCACCCACCTCTaGAGCAGCACGCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGPPTHL*SSTQGL
Trigger: CAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAGCAGTGGGCTGGGGGTaGAGTCTGGGGCCTCACTAC +
Preference number: 2 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTAVGWG*SLGPHY
Trigger: GTAGTGAGGCCCCAGACTTCACCCCCAGCCCACTGC...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGAGGCTTTCATGTGAGTaGACAAGGGTGGGGACAGGG +
Preference number: 2 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWRLSCE*TRVGTG
Trigger: CCCTGTCCCCACCCTTGTGCACTCACATGAAAGCCT...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACCACCCTCAGTGGGATaGGGGCTGTGCCGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPPPSVG*GLCRPL
Trigger: AAGGGGCCGGCACAGCCCCCATCCCACTGAGGGTGG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGATTGCCCGTGGGGCTaGGGAGTGTTCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: AGAAETRWVGVHEGESEHDCPWG*GVFRVV
Trigger: CACCACCCGGAACACTCCCCAGCCCCACGGGCAATC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGGCCTCCTGCTTGGCTaGACCCCAACATTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRGLLLG*TPTLGA
Trigger: TGCCCCCAATGTTGGGGTGCAGCCAAGCAGGAGGCC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGGCCTCCTGCTTGGCTaGACCCCAACATTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: RESGKGRVDLEAELPMALGLLLG*TPTLGA
Trigger: TGCCCCCAATGTTGGGGTGCAGCCAAGCAGGAGGCC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGGGGAGTGTTCCGGGTaGTGTGCAAGGGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: ETREHESQLSGAVWTGRGGECSG*CARGRS
Trigger: GCTCCTGCCCCTTGCACACCACCCGGAACACTCCCC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR CAA 90 bp TCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTaGAACCAGCTGACTCCGGTCCCTGGCAGCCTAGGTGGAGTTAGG +
Preference number: 2 (lower is better)
Translates to: SGKGRVDLEAELPMA*NQLTPVPGSLGGVR
Trigger: CCTAACTCCACCTAGGCTGCCAGGGACCGGAGTCAGCTGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEEVTDM*GPHLQE
Trigger: CTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGTGTGCAGGAAACGCTaGCCACTGAGTGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEVCRKR*PLSELS
Trigger: GCTCAGCTCACTCAGTGGTCAGCGTTTCCTGCACAC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGGGGAGCCCTCAGGGTaGTGCCGGCATCCTTGGAGT +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGGEPSG*CRHPWS
Trigger: ACTCCAAGGATGCCGGCATCACCCTGAGGGCTCCCC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGGCCTCCTGCTTGGCTaGACCCCAACATTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPGLLLG*TPTLGA
Trigger: TGCCCCCAATGTTGGGGTGCAGCCAAGCAGGAGGCC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACATGGACGGGGAGAGGGTaGAGGAGCGTGTGCAAATGG +
Preference number: 2 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTWTGRG*RSVCKW
Trigger: CCATTTGCACACGCTCCTGCACCCTCTCCCCGTCCA...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGCCTTGGCCTCCTGCTTaGCTGCACCCCAACATTGGG +
Preference number: 2 (lower is better)
Translates to: RESGKGRVDLEAELPMALPWPPA*LHPNIG
Trigger: CCCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGG...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGATTGCCCGTGGGGCTaGGGAGTGTTCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGDCPWG*GVFRVV
Trigger: CACCACCCGGAACACTCCCCAGCCCCACGGGCAATC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGTGAGTGCACAAGGGTaGGGACAGGGACCCGAAGTC +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGVSAQG*GQGPEV
Trigger: GACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCACGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: GRADRIARGAGECSGWCARKRGG*VFMRER
Trigger: TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCG...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGA +
Preference number: 2 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRAAETR*VGVHEG
Trigger: TCCCTCATGAACACCCACCCACCTCGTTTCCGCAGC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGCTGGGGGTGAAGTCTaGGGCCTCACTACCCCATTC +
Preference number: 2 (lower is better)
Translates to: RESGKGRVDLEAELPMALAGGEV*GLTTPF
Trigger: GAATGGGGTAGTGAGGCCCCAGACTTCACCCCCAGC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACAACATGAGAGTCAGCTaGGCGGAGCGGTATGGACGG +
Preference number: 2 (lower is better)
Translates to: AGAAETRWVGVHEGESEHNMRVS*AERYGR
Trigger: CCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTT...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGTGAGTGCACAAGGGTaGGGACAGGGACCCGAAGTC +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPVSAQG*GQGPEV
Trigger: GACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGA +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGAAETR*VGVHEG
Trigger: TCCCTCATGAACACCCACCCACCTCGTTTCCGCAGC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCCTGGTCCAGCCCCCTTaGGAGGGCCAGGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPILVQPP*EGQGLW
Trigger: CCACAGCCCCTGGCCCTCCCAAGGGGGCTGGACCAG...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAAACATGAGAGTCAGCTaGGCGGAGCGGTATGGACGG +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPNMRVS*AERYGR
Trigger: CCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAACGCTGACCACTGAGTaGGCTGAGCACAGAATGTGG +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGTLTTE*AEHRMW
Trigger: CCACATTCTGTGCTCAGCTCACTCAGTGGTCAGCGT...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGCCGGGAAACGCACATaGGAGGTAAAGTGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGAGKRT*EVKCAG
Trigger: TCCTGCACACTTTACCTCTCATGTGCGTTTCCCGGC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: ETREHESQLSGAVWTGRGNGTRP*PMRAQG
Trigger: TCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATT...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPNGTRP*PMRAQG
Trigger: TCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCATGGCTCAGGGGGCTCTaGAGTCCAGAGAATGGCACA +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPWLRGL*SPENGT
Trigger: TGTGCCATTCTCTGGACTTCAGAGCCCCCTGAGCCA...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAAGGCTTTCATGTGAGTaGACAAGGGTGGGGACAGGG +
Preference number: 2 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERRLSCE*TRVGTG
Trigger: CCCTGTCCCCACCCTTGTGCACTCACATGAAAGCCT...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGGGTGCAGGAGCGTGTaGAAATGGCCTGTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPGCRSV*KWPVKV
Trigger: CACCTTCACAGGCCATTTGCACACGCTCCTGCACCC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCGCAGCACGCAGGGGCTaGGGAAACGAGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GDRETNGVEWDETMTDEGAARRG*GNEVGG
Trigger: CCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGC...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGGATTGCCCGTGGGGCTaGGGAGTGTTCCGGGTGGTG +
Preference number: 2 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRDCPWG*GVFRVV
Trigger: CACCACCCGGAACACTCCCCAGCCCCACGGGCAATC...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGACGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGRKRGG*VFMRER
Trigger: TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCG...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCTGCACCCCAACATTaGGGGCATCACAGATTCACC +
Preference number: 2 (lower is better)
Translates to: AGAAETRWVGVHEGESEHAAPQH*GHHRFT
Trigger: GGTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR TCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGTGTGCAGGAAACGCTaGCCACTGAGTGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGVCRKR*PLSELS
Trigger: GCTCAGCTCACTCAGTGGTCAGCGTTTCCTGCACAC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCCGAGACCATGACCGATaGGGGCCCAAGGAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIRDHDR*GPKEPP
Trigger: TGGGGGCTCCTTGGGCCCTCATCGGTCATGGTCTCG...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGTGGGATGGGGGCTGTaGCGGCCCCTTGGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKVGWGL*RPLGLL
Trigger: CAGGAGGCCAAGGGGCCGGCACAGCCCCCATCCCAC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGGGTGCAGGAGCGTGTaGAAATGGCCTGTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGGCRSV*KWPVKV
Trigger: CACCTTCACAGGCCATTTGCACACGCTCCTGCACCC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPRSVCK*PVKVEV
Trigger: CACCTCCACCTTCACAGGCCATTTGCACACGCTCCT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGCTGAAGTCCAGAGAATaGCACACACACAGACAGCCA +
Preference number: 2 (lower is better)
Translates to: PLEQHAGAAETRWVGVHELKSRE*HTHRQP
Trigger: TGGCTGTCTGTGTGTGTGCCATTCTCTGGACTTCAG...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGCCGGGAAACGCACATaGGAGGTAAAGTGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGAGKRT*EVKCAG
Trigger: TCCTGCACACTTTACCTCTCATGTGCGTTTCCCGGC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR GCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGATCTGAAGACCTAAGTTaGCTTCCCTCTTTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERSEDLS*LPSLPS
Trigger: GGAGGGCAAAGAGGGAAGGCAACTTAGGTCTTCAGA...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGRSVCK*PVKVEV
Trigger: CACCTCCACCTTCACAGGCCATTTGCACACGCTCCT...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGACAAAGAGGGCAGAGTTaGAGTTATGGGCAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGQRGQS*SYGQQR
Trigger: TCTCTGCTGCCCATAACTCCAACTCTGCCCTCTTTG...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR GCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCTGGACGGGGAGAGGGTaGAGGAGCGTGTGCAAATGG +
Preference number: 2 (lower is better)
Translates to: GDRETNGVEWDETMTDEGWTGRG*RSVCKW
Trigger: CCATTTGCACACGCTCCTGCACCCTCTCCCCGTCCA...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCCCTTGGCCTCCTGCTTaGCTGCACCCCAACATTGGG +
Preference number: 2 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIPWPPA*LHPNIG
Trigger: CCCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGG...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGGGGAGTGTTCCGGGTaGTGTGCAAGGGGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKGECSG*CARGRS
Trigger: GCTCCTGCCCCTTGCACACCACCCGGAACACTCCCC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGTGAGTGCACAAGGGTaGGGACAGGGACCCGAAGTC +
Preference number: 2 (lower is better)
Translates to: DRETNGVEWDETMTDEGPVSAQG*GQGPEV
Trigger: GACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGCTGAGCACAGAATGTaGGAAGGAGAGAGTGCAAAT +
Preference number: 2 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERAEHRM*EGESAN
Trigger: ATTTGCACTCTCTCCTTCCCACATTCTGTGCTCAGC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACAAATGGTGTGGAATaGGACGAGACCATGACCGAT +
Preference number: 2 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTTNGVE*DETMTD
Trigger: ATCGGTCATGGTCTCGTCCCATTCCACACCATTTGT...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGAGACAGAGAAACAAATaGTGTGGAATGGGACGAGAC +
Preference number: 2 (lower is better)
Translates to: PLEQHAGAAETRWVGVHERQRNK*CGMGRD
Trigger: GTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCT...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAG +
Preference number: 2 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIEVTDM*GPHLQE
Trigger: CTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGA +
Preference number: 2 (lower is better)
Translates to: GDRETNGVEWDETMTDEGAAETR*VGVHEG
Trigger: TCCCTCATGAACACCCACCCACCTCGTTTCCGCAGC...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAACAAATGGTGTGGAATaGGACGAGACCATGACCGAT +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPTNGVE*DETMTD
Trigger: ATCGGTCATGGTCTCGTCCCATTCCACACCATTTGT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAAAGGGAAGGGCAAATaGGAGTCCCTTTCTCATGTA +
Preference number: 2 (lower is better)
Translates to: RESGKGRVDLEAELPMALKGKGK*ESLSHV
Trigger: TACATGAGAAAGGGACTCCCATTTGCCCTTCCCTTT...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGCAGAGTTGGAGTTATaGGCAGCAGAGAATAGGACA +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPAELEL*AAENRT
Trigger: TGTCCTATTCTCTGCTGCCCATAACTCCAACTCTGC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR GCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCAGGCTTTCATGTGAGTaGACAAGGGTGGGGACAGGG +
Preference number: 2 (lower is better)
Translates to: GDRETNGVEWDETMTDEGRLSCE*TRVGTG
Trigger: CCCTGTCCCCACCCTTGTGCACTCACATGAAAGCCT...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GDRETNGVEWDETMTDEGRSVCK*PVKVEV
Trigger: CACCTCCACCTTCACAGGCCATTTGCACACGCTCCT...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCCGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIRKRGG*VFMRER
Trigger: TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCG...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGCTGGGGGTGAAGTCTaGGGCCTCACTACCCCATTC +
Preference number: 2 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKAGGEV*GLTTPF
Trigger: GAATGGGGTAGTGAGGCCCCAGACTTCACCCCCAGC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKNGTRP*PMRAQG
Trigger: TCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATT...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCAAAGGGAAGGGCAAATaGGAGTCCCTTTCTCATGTA +
Preference number: 2 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGKGKGK*ESLSHV
Trigger: TACATGAGAAAGGGACTCCCATTTGCCCTTCCCTTT...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGCACAGTAATTCAAGATaGTCACCACAAGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: RESGKGRVDLEAELPMALHSNSR*SPQEEE
Trigger: TTCTTCTTCTTGTGGTGATCATCTTGAATTACTGTG...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACACAGTAATTCAAGATaGTCACCACAAGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPHSNSR*SPQEEE
Trigger: TTCTTCTTCTTGTGGTGATCATCTTGAATTACTGTG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCGCTGAGCACAGAATGTaGGAAGGAGAGAGTGCAAAT +
Preference number: 2 (lower is better)
Translates to: GDRETNGVEWDETMTDEGAEHRM*EGESAN
Trigger: ATTTGCACTCTCTCCTTCCCACATTCTGTGCTCAGC...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGCTGTGCCGGCCCCTaGGCCTCCTGCTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEGCAGP*ASCLAA
Trigger: TGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGCC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGCTGGTCCAGCCCCCTaGGGAGGGCCAGGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRAGPAP*GGPGAV
Trigger: CACAGCCCCTGGCCCTCCCAAGGGGGCTGGACCAGC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR CAA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGGCTGTGCCGGCCCCTaGGCCTCCTGCTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: AGAAETRWVGVHEGESEHGCAGP*ASCLAA
Trigger: TGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGCC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGCGAGCAGATAGGATaGCCCGTGGGGCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEGEQIG*PVGLGS
Trigger: ACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR CCA 72 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCC +
Preference number: 3 (lower is better)
Translates to: PLEQHAGAAETR*VGVHEGESEHA
Trigger: GGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGGCGAGCAGATAGGATaGCCCGTGGGGCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERGEQIG*PVGLGS
Trigger: ACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACCCCTTGGCCTCCTGCTaGGCTGCACCCCAACATTGG +
Preference number: 3 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHPLASC*AAPQHW
Trigger: CCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGGG...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 72 bp CAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAGGGCGAGCAGATAGGA +
Preference number: 3 (lower is better)
Translates to: QGWGQGPEVTDM*GPHLQEGEQIG
Trigger: TCCTATCTGCTCGCCCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGGCTGTGCCGGCCCCTaGGCCTCCTGCTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIGCAGP*ASCLAA
Trigger: TGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGCC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGGCTGCACCCCAACATaGGGGGCATCACAGATTCAC +
Preference number: 3 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRGCTPT*GASQIH
Trigger: GTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGCC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR CAA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAAAGGGAAGGGTAGACTaGGAGGCAGAGCTCCCGATG +
Preference number: 3 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPKGRVD*EAELPM
Trigger: CATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGAGTTGCCTTCCCTCTTaGCCCTCCCATCCCATTGCC +
Preference number: 3 (lower is better)
Translates to: ETREHESQLSGAVWTGRGSCLPS*PSHPIA
Trigger: GGCAATGGGATGGGAGGGCAAAGAGGGAAGGCAACT...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR CAA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGCCAAAGAGGGCAGAGTaGGAGTTATGGGCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRPKRAE*ELWAAE
Trigger: CTCTGCTGCCCATAACTCCAACTCTGCCCTCTTTGG...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534837.6
3UTR-3UTR CAA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGGCGAGCAGATAGGATaGCCCGTGGGGCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIGEQIG*PVGLGS
Trigger: ACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR-3UTR CAA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCCTTGGCCTCCTGCTaGGCTGCACCCCAACATTGG +
Preference number: 3 (lower is better)
Translates to: GDRETNGVEWDETMTDEGPLASC*AAPQHW
Trigger: CCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGGG...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 72 bp ACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGAGCCCCCAGCTCACCT +
Preference number: 3 (lower is better)
Translates to: TEKQMVWNGTRP*PMRAQGAPSSP
Trigger: AGGTGAGCTGGGGGCTCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR GCA 72 bp GAAGGTGGAGGTGAGTGTGCAAGGCTTTCATGTGAGTaGACAAGGGTGGGGACAGGGACCCGAAGTCACAGA +
Preference number: 3 (lower is better)
Translates to: EGGGECARLSCE*TRVGTGTRSHR
Trigger: TCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGAAAGCCTTGCACACTCACCTCCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR TCA 72 bp GAAACGCACATGAGAGGTAAAGTGTGCAGGAAACGCTaGCCACTGAGTGAGCTGAGCACAGAATGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: ETHMRGKVCRKR*PLSELSTECGK
Trigger: CTTCCCACATTCTGTGCTCAGCTCACTCAGTGGTCAGCGTTTCCTGCACACTTTACCTCTCATGTGCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGGGATGGGGGCTGTaGCGGCCCCTTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWVGWGL*RPLGLL
Trigger: CAGGAGGCCAAGGGGCCGGCACAGCCCCCATCCCAC...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCATGGTGGGGAGGTTTaGCCCGCGGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWHGGEV*PAAGRW
Trigger: CCAGCGCCCTGCCGCGGGCCAAACCTCCCCACCATG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR GCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGCAGCACGCAGGGGCTaGGGAAACGAGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWAARRG*GNEVGG
Trigger: CCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGC...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCACGCACACATGACGTaGGGCCGAGGGGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWHAHMT*GRGASP
Trigger: AGGGGAGGCCCCTCGGCCCCACGTCATGTGTGCGTG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCGAGACCATGACCGATaGGGGCCCAAGGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWRDHDR*GPKEPP
Trigger: TGGGGGCTCCTTGGGCCCTCATCGGTCATGGTCTCG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGGGTGCGGGGCATGGTaGGGAGGTTTGGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRGCGAW*GGLARG
Trigger: GCCGCGGGCCAAACCTCCCCACCATGCCCCGCACCC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGATTGCCCGTGGGGCTaGGGAGTGTTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWDCPWG*GVFRVV
Trigger: CACCACCCGGAACACTCCCCAGCCCCACGGGCAATC...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAGAGGATGAAGAGCCCTaGGCAGGCGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAEDEEP*AGGGRG
Trigger: GCCCCTCCCACCGCCTGCTCAGGGCTCTTCATCCTC...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGCCCGAAGCAGGAGACTaGGCGGAGCCGCCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRPEAGD*AEPPAE
Trigger: CTCGGCGGGCGGCTCCGCGCAGTCTCCTGCTTCGGG...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAGGGTGCGGGGCATGGTaGGGAGGTTTGGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTGCGAW*GGLARG
Trigger: GCCGCGGGCCAAACCTCCCCACCATGCCCCGCACCC...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR TCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGTCCCACACGCACACATaGCGTGGGGCCGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRSHTHT*RGAEGP
Trigger: AGGCCCCTCGGCCCCACGTCATGTGTGCGTGTGGGA...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCAGGACTTGCCGACGTaGTCTTGGGACCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWQDLPT*SWDPRR
Trigger: TCTCCTCGGGTCCCAAGATCACGTCGGCAAGTCCTG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCACGAGACCATGACCGATaGGGGCCCAAGGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCARDHDR*GPKEPP
Trigger: TGGGGGCTCCTTGGGCCCTCATCGGTCATGGTCTCG...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCACTCAGGGCACCTTGCTaGCCTGAGGGTCTGCGTCGC +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCALRAPC*PEGLRR
Trigger: GCGACGCAGACCCTCAGGGCAGCAAGGTGCCCTGAG...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGTGGGATGGGGGCTGTaGCGGCCCCTTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGVGWGL*RPLGLL
Trigger: CAGGAGGCCAAGGGGCCGGCACAGCCCCCATCCCAC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACACCCCGAGGCAGGGAGTaGCGAGAGCGGACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTPRGRE*RERTGD
Trigger: GTCCCCAGTCCGCTCTCGGCACTCCCTGCCTCGGGG...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR GCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCCATCCCATTGCCCCTaGCCTCACCGGTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWPSHCP*PHRFNW
Trigger: CCAGTTGAACCGGTGAGGGCAGGGGCAATGGGATGG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGCCCCCGAACAGGAATaGCCGCAGGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEAPEQE*PQGGRC
Trigger: GCACCTGCCACCCTGCGGCCATTCCTGTTCGGGGGC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGCCCCCGAACAGGAATaGCCGCAGGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRAPEQE*PQGGRC
Trigger: GCACCTGCCACCCTGCGGCCATTCCTGTTCGGGGGC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAAGGCTGGAGCCCCCTTaGGGTGGGGCATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGRLEPP*GGASQA
Trigger: GGCCTGGGATGCCCCACCCCAAGGGGGCTCCAGCCT...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCCTTGGCCTCCTGCTTaGCTGCACCCCAACATTGGG +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWPWPPA*LHPNIG
Trigger: CCCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGCCACCCTCAGTGGGATaGGGGCTGTGCCGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRPPSVG*GLCRPL
Trigger: AAGGGGCCGGCACAGCCCCCATCCCACTGAGGGTGG...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACCTGGTCCAGCCCCCTTaGGAGGGCCAGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHLVQPP*EGQGLW
Trigger: CCACAGCCCCTGGCCCTCCCAAGGGGGCTGGACCAG...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR TCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGAGGATGAAGAGCCCTaGGCAGGCGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHEDEEP*AGGGRG
Trigger: GCCCCTCCCACCGCCTGCTCAGGGCTCTTCATCCTC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGATCCCACACGCACACATaGCGTGGGGCCGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGSHTHT*RGAEGP
Trigger: AGGCCCCTCGGCCCCACGTCATGTGTGCGTGTGGGA...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAGGCCCCCAGCACAGTaGCTCCAGCCGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALRPPAQ*LQPGTG
Trigger: ACCTGTCCCCGGCTGGAGTCACTGTGCTGGGGGCCT...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAAGGCCCCCAGCACAGTaGCTCCAGCCGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERRPPAQ*LQPGTG
Trigger: ACCTGTCCCCGGCTGGAGTCACTGTGCTGGGGGCCT...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGCACGCACACATGACGTaGGGCCGAGGGGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALHAHMT*GRGASP
Trigger: AGGGGAGGCCCCTCGGCCCCACGTCATGTGTGCGTG...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCACCGAGGAGATCGGCTTaGTGGAGGTGCTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAPRRSA*WRCSLP
Trigger: TGGGAGCGAGCACCTCCACCAAGCCGATCTCCTCGG...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAATAGCCCAGGGGTATTaGGATGAGGGCGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAIAQGY*DEGGPS
Trigger: GGAGGGGCCGCCCTCATCCCAATACCCCTGGGCTAT...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCCAGAAATCCGGGATTaGCAGAGTTGGGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWPEIRD*QSWGPL
Trigger: GAGGGGACCCCAACTCTGCCAATCCCGGATTTCTGG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAGGAATGGCCGCAGGGTaGCAGGTGCCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAGMAAG*QVPLQG
Trigger: TCCTTGGAGAGGCACCTGCCACCCTGCGGCCATTCC...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAGGTCTGCGTCGCTTCTaGCTGCGGTCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAGLRRF*LRSQQN
Trigger: GTTCTGCTGGGACCGCAGCCAGAAGCGACGCAGACC...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGCTGTGCCGGCCCCTTaGCCTCCTGCTTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGAVPAP*PPAWLH
Trigger: GTGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAGCTGTGCCGGCCCCTTaGCCTCCTGCTTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTAVPAP*PPAWLH
Trigger: GTGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGC...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACCCACCCTCAGTGGGATaGGGGCTGTGCCGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHPPSVG*GLCRPL
Trigger: AAGGGGCCGGCACAGCCCCCATCCCACTGAGGGTGG...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGGGGAGTGTTCCGGGTaGTGTGCAAGGGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRGECSG*CARGRS
Trigger: GCTCCTGCCCCTTGCACACCACCCGGAACACTCCCC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGACCTCCCACCCACCTCTaGAGCAGCACGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERPPTHL*SSTQGL
Trigger: CAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACGGCACCTTGCTGCCCTaGGGGTCTGCGTCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHGTLLP*GSASLL
Trigger: CAGAAGCGACGCAGACCCTCAGGGCAGCAAGGTGCC...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGGCACCTTGCTGCCCTaGGGGTCTGCGTCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRGTLLP*GSASLL
Trigger: CAGAAGCGACGCAGACCCTCAGGGCAGCAAGGTGCC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGGCACCTTGCTGCCCTaGGGGTCTGCGTCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALGTLLP*GSASLL
Trigger: CAGAAGCGACGCAGACCCTCAGGGCAGCAAGGTGCC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGCCGGGAAACGCACATaGGAGGTAAAGTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWAGKRT*EVKCAG
Trigger: TCCTGCACACTTTACCTCTCATGTGCGTTTCCCGGC...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGGGGAGCCCTCAGGGTaGTGCCGGCATCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALGEPSG*CRHPWS
Trigger: ACTCCAAGGATGCCGGCATCACCCTGAGGGCTCCCC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGTCAGCCTTTACTGCATaGTTGGCGCGGCGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRSAFTA*LARRRD
Trigger: GTCGCGCCGCCGCGCCAAGCATGCAGTAAAGGCTGA...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR GCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGTCGGCTTGGTGGAGGTaGTCGCTCCCACACGCACAC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRSAWWR*SLPHAH
Trigger: GTGTGCGTGTGGGAGCGAGCACCTCCACCAAGCCGA...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAGCTGCCCTGAGGGTCTaGGTCGCTTCTGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTAALRV*VASGCG
Trigger: ACCGCAGCCAGAAGCGACGCAGACCCTCAGGGCAGC...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGCTGCCCTGAGGGTCTaGGTCGCTTCTGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRAALRV*VASGCG
Trigger: ACCGCAGCCAGAAGCGACGCAGACCCTCAGGGCAGC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGTGCTGGCTCTCCTCCTaGCTCAGGGCACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHECWLSS*LRAPCC
Trigger: GCAGCAAGGTGCCCTGAGGCAGGAGGAGAGCCAGCA...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGCCGAGGAGATCGGCTTaGTGGAGGTGCTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRPRRSA*WRCSLP
Trigger: TGGGAGCGAGCACCTCCACCAAGCCGATCTCCTCGG...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGGTCTGCGTCGCTTCTaGCTGCGGTCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRGLRRF*LRSQQN
Trigger: GTTCTGCTGGGACCGCAGCCAGAAGCGACGCAGACC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGCTGTGCCGGCCCCTTaGCCTCCTGCTTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPAVPAP*PPAWLH
Trigger: GTGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGGGGAGTGTTCCGGGTaGTGTGCAAGGGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERGECSG*CARGRS
Trigger: GCTCCTGCCCCTTGCACACCACCCGGAACACTCCCC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGGGGAGTGTTCCGGGTaGTGTGCAAGGGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHGECSG*CARGRS
Trigger: GCTCCTGCCCCTTGCACACCACCCGGAACACTCCCC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGATTGCCCGTGGGGCTaGGGAGTGTTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERDCPWG*GVFRVV
Trigger: CACCACCCGGAACACTCCCCAGCCCCACGGGCAATC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAGTGAGTGCACAAGGGTaGGGACAGGGACCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAVSAQG*GQGPEV
Trigger: GACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWRKRGG*VFMRER
Trigger: TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACCTCCCACCCACCTCTaGAGCAGCACGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPPPTHL*SSTQGL
Trigger: CAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGCGCAGGAGACGAGCTaGGGGTGGGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGAQETS*GWGRSL
Trigger: GAGGCTCCTGCCCCACCCCCAGCTCGTCTCCTGCGC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGGTTCGAGGGGAGGATaGAGAGCCCTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPGSRGG*RALSRR
Trigger: CCGCCTGCTCAGGGCTCTTCATCCTCCCCTCGAACC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACGAGACCATGACCGATaGGGGCCCAAGGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPRDHDR*GPKEPP
Trigger: TGGGGGCTCCTTGGGCCCTCATCGGTCATGGTCTCG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGGGGAGCCCTCAGGGTaGTGCCGGCATCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGGEPSG*CRHPWS
Trigger: ACTCCAAGGATGCCGGCATCACCCTGAGGGCTCCCC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGGGGAGCCCTCAGGGTaGTGCCGGCATCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPGEPSG*CRHPWS
Trigger: ACTCCAAGGATGCCGGCATCACCCTGAGGGCTCCCC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGCAGTGGGCTGGGGGTaGAGTCTGGGGCCTCACTAC +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGAVGWG*SLGPHY
Trigger: GTAGTGAGGCCCCAGACTTCACCCCCAGCCCACTGC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGCAGTGGGCTGGGGGTaGAGTCTGGGGCCTCACTAC +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPAVGWG*SLGPHY
Trigger: GTAGTGAGGCCCCAGACTTCACCCCCAGCCCACTGC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCATGGCTCAGGGGGCTCTaGAGTCCAGAGAATGGCACA +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAWLRGL*SPENGT
Trigger: TGTGCCATTCTCTGGACTTCAGAGCCCCCTGAGCCA...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGTCGGCTTGGTGGAGGTaGTCGCTCCCACACGCACAC +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALSAWWR*SLPHAH
Trigger: GTGTGCGTGTGGGAGCGAGCACCTCCACCAAGCCGA...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGTGCCAGGCAGGACTTaGCGACGTGATCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEVPGRT*RRDLGT
Trigger: GGTCCCAAGATCACGTCGGCAAGTCCTGCCTGGCAC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGACCGCAGGGTGGCAGGTaGCTCTCCAAGGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERPQGGR*LSKDKP
Trigger: GGGCTTATCCTTGGAGAGGCACCTGCCACCCTGCGG...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGTGCTGGCTCTCCTCCTaGCTCAGGGCACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRCWLSS*LRAPCC
Trigger: GCAGCAAGGTGCCCTGAGGCAGGAGGAGAGCCAGCA...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGATGCTGGCTCTCCTCCTaGCTCAGGGCACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERCWLSS*LRAPCC
Trigger: GCAGCAAGGTGCCCTGAGGCAGGAGGAGAGCCAGCA...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGAGGTCTGTCAGTGGCTaGTGGCTCTCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRRSVSG*WLSSCL
Trigger: GAGGCAGGAGGAGAGCCAGCAGCCACTGACAGACCT...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGCCTCCTGCTTGGCTaGACCCCAACATTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGGLLLG*TPTLGA
Trigger: TGCCCCCAATGTTGGGGTGCAGCCAAGCAGGAGGCC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGGCCTCCTGCTTGGCTaGACCCCAACATTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERGLLLG*TPTLGA
Trigger: TGCCCCCAATGTTGGGGTGCAGCCAAGCAGGAGGCC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGAGGAGATCGGCTTGGTaGAGGTGCTCGCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHERRSAW*RCSLPH
Trigger: GTGTGGGAGCGAGCACCTCCACCAAGCCGATCTCCT...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACACAAAGCCTGATGGGGTaGCTGGGGGTGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTQSLMG*LGVQCQ
Trigger: CTGGCACTGCACCCCCAGCCACCCCATCAGGCTTTG...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGAATGGCCGCAGGGTaGCAGGTGCCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGGMAAG*QVPLQG
Trigger: TCCTTGGAGAGGCACCTGCCACCCTGCGGCCATTCC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGTCTGCGTCGCTTCTaGCTGCGGTCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGGLRRF*LRSQQN
Trigger: GTTCTGCTGGGACCGCAGCCAGAAGCGACGCAGACC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGATTGCCCGTGGGGCTaGGGAGTGTTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGDCPWG*GVFRVV
Trigger: CACCACCCGGAACACTCCCCAGCCCCACGGGCAATC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGCTGGGGGTGAAGTCTaGGGCCTCACTACCCCATTC +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRAGGEV*GLTTPF
Trigger: GAATGGGGTAGTGAGGCCCCAGACTTCACCCCCAGC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGGCCCAAAGGGAGGCTaGGAAGGGAGGACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHGPKGG*EGRTGS
Trigger: TGAGCCAGTCCTCCCTTCCCAGCCTCCCTTTGGGCC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGGTTCGAGGGGAGGATaGAGAGCCCTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGGSRGG*RALSRR
Trigger: CCGCCTGCTCAGGGCTCTTCATCCTCCCCTCGAACC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACCAGGACTTGCCGACGTaGTCTTGGGACCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHQDLPT*SWDPRR
Trigger: TCTCCTCGGGTCCCAAGATCACGTCGGCAAGTCCTG...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGCAGTGGGCTGGGGGTaGAGTCTGGGGCCTCACTAC +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGAVGWG*SLGPHY
Trigger: GTAGTGAGGCCCCAGACTTCACCCCCAGCCCACTGC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACCCCCCACCCCAGCTCTaGAGACCTAAGTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHPPPQL*RPKLPS
Trigger: GGAAGGCAACTTAGGTCTTCAGAGCTGGGGTGGGGG...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR GCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGTGCCAGGCAGGACTTaGCGACGTGATCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALVPGRT*RRDLGT
Trigger: GGTCCCAAGATCACGTCGGCAAGTCCTGCCTGGCAC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACCGCAGGGTGGCAGGTaGCTCTCCAAGGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPPQGGR*LSKDKP
Trigger: GGGCTTATCCTTGGAGAGGCACCTGCCACCCTGCGG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGCTGCCCTGAGGGTCTaGGTCGCTTCTGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGAALRV*VASGCG
Trigger: ACCGCAGCCAGAAGCGACGCAGACCCTCAGGGCAGC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACTGGACGGGGAGAGGGTaGAGGAGCGTGTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHWTGRG*RSVCKW
Trigger: CCATTTGCACACGCTCCTGCACCCTCTCCCCGTCCA...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGCGCAGGCCACATCCTaGACTCCATGTCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEAQATS*TPCLRS
Trigger: AGACCTCAGACATGGAGTCCAGGATGTGGCCTGCGC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAAGGAGATCGGCTTGGTaGAGGTGCTCGCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGRRSAW*RCSLPH
Trigger: GTGTGGGAGCGAGCACCTCCACCAAGCCGATCTCCT...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAAGGAGATCGGCTTGGTaGAGGTGCTCGCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTRRSAW*RCSLPH
Trigger: GTGTGGGAGCGAGCACCTCCACCAAGCCGATCTCCT...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGCAAAGCCTGATGGGGTaGCTGGGGGTGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGQSLMG*LGVQCQ
Trigger: CTGGCACTGCACCCCCAGCCACCCCATCAGGCTTTG...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACACGGGATTGGCAGAGTTaGGGTCCCCTCCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTRDWQS*GPLHPL
Trigger: GAGAGGATGGAGGGGACCCCAACTCTGCCAATCCCG...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGCCAGAAATCCGGGATTaGCAGAGTTGGGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEPEIRD*QSWGPL
Trigger: GAGGGGACCCCAACTCTGCCAATCCCGGATTTCTGG...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAGCATGGAGTCTGAGTTaGGGTGTGGGGTTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTAWSLS*GVGLRA
Trigger: GGCTCGCAACCCCACACCCCAACTCAGACTCCATGC...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGCATGGAGTCTGAGTTaGGGTGTGGGGTTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERAWSLS*GVGLRA
Trigger: GGCTCGCAACCCCACACCCCAACTCAGACTCCATGC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGAGGCTGGAGCCCCCTTaGGGTGGGGCATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRRLEPP*GGASQA
Trigger: GGCCTGGGATGCCCCACCCCAAGGGGGCTCCAGCCT...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGTTCAACTGGAAGGCTaGAGCCCCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGVQLEG*SPLGVG
Trigger: CCCCACCCCAAGGGGGCTCCAGCCTTCCAGTTGAAC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGGGAATCCGGTTCAACTaGAAGGCTGGAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRGIRFN*KAGAPL
Trigger: CAAGGGGGCTCCAGCCTTCCAGTTGAACCGGATTCC...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000540656.5
CDS-3UTR CCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACGTGAGTGCACAAGGGTaGGGACAGGGACCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHVSAQG*GQGPEV
Trigger: GACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
3UTR CAA 72 bp GGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTaGAACCAGCTGACTCCGGTCCCTGGCAGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GRVDLEAELPMA*NQLTPVPGSLG
Trigger: ACCTAGGCTGCCAGGGACCGGAGTCAGCTGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHEVTDM*GPHLQE
Trigger: CTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTC...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCREVTDM*GPHLQE
Trigger: CTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAAACATGAGAGTCAGCTaGGCGGAGCGGTATGGACGG +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGNMRVS*AERYGR
Trigger: CCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTT...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGTGCAGGAAACGCTaGCCACTGAGTGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERVCRKR*PLSELS
Trigger: GCTCAGCTCACTCAGTGGTCAGCGTTTCCTGCACAC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGTGTGCAGGAAACGCTaGCCACTGAGTGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGVCRKR*PLSELS
Trigger: GCTCAGCTCACTCAGTGGTCAGCGTTTCCTGCACAC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGATGGCTCAGGGGGCTCTaGAGTCCAGAGAATGGCACA +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGWLRGL*SPENGT
Trigger: TGTGCCATTCTCTGGACTTCAGAGCCCCCTGAGCCA...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGAGGTCTGTCAGTGGCTaGTGGCTCTCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGRSVSG*WLSSCL
Trigger: GAGGCAGGAGGAGAGCCAGCAGCCACTGACAGACCT...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGAGGCTTTCATGTGAGTaGACAAGGGTGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHERLSCE*TRVGTG
Trigger: CCCTGTCCCCACCCTTGTGCACTCACATGAAAGCCT...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGGGTGCAGGAGCGTGTaGAAATGGCCTGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRGCRSV*KWPVKV
Trigger: CACCTTCACAGGCCATTTGCACACGCTCCTGCACCC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGGGTGCAGGAGCGTGTaGAAATGGCCTGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHGCRSV*KWPVKV
Trigger: CACCTTCACAGGCCATTTGCACACGCTCCTGCACCC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCATGGACGGGGAGAGGGTaGAGGAGCGTGTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPWTGRG*RSVCKW
Trigger: CCATTTGCACACGCTCCTGCACCCTCTCCCCGTCCA...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGCAGCCTTTACTGTTGTaGGCAGGAGACGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRQPLLL*AGDELG
Trigger: CCCCAGCTCGTCTCCTGCGCACAACAGTAAAGGCTG...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCCAAAGCCTGATGGGGTaGCTGGGGGTGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGQSLMG*LGVQCQ
Trigger: CTGGCACTGCACCCCCAGCCACCCCATCAGGCTTTG...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCATAGCCCAGGGGTATTaGGATGAGGGCGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGIAQGY*DEGGPS
Trigger: GGAGGGGCCGCCCTCATCCCAATACCCCTGGGCTAT...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGACCAGAAATCCGGGATTaGCAGAGTTGGGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERPEIRD*QSWGPL
Trigger: GAGGGGACCCCAACTCTGCCAATCCCGGATTTCTGG...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCAGGCTGGAGCCCCCTTaGGGTGGGGCATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GDRETNGVEWDETMTDEGRLEPP*GGASQA
Trigger: GGCCTGGGATGCCCCACCCCAAGGGGGCTCCAGCCT...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACGGAATCCGGTTCAACTaGAAGGCTGGAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHGIRFN*KAGAPL
Trigger: CAAGGGGGCTCCAGCCTTCCAGTTGAACCGGATTCC...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGCTGCACCCCAACATTaGGGGCATCACAGATTCACC +
Preference number: 4 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEAAPQH*GHHRFT
Trigger: GGTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGC...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGACAAATGGTGTGGAATaGGACGAGACCATGACCGAT +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWTNGVE*DETMTD
Trigger: ATCGGTCATGGTCTCGTCCCATTCCACACCATTTGT...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCACTCCCCGCACAGGGCTaGAGAGCGGCGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPLPAQG*RAARVG
Trigger: CCCCACTCTCGCCGCTCTCCAGCCCTGTGCGGGGAG...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACCTCACCGGTTCAACTaGAAGGCTGGAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPPHRFN*KAGAPL
Trigger: CAAGGGGGCTCCAGCCTTCCAGTTGAACCGGTGAGG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR TCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCATCCCACACGCACACATaGCGTGGGGCCGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPSHTHT*RGAEGP
Trigger: AGGCCCCTCGGCCCCACGTCATGTGTGCGTGTGGGA...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACACGCTGACCACTGAGTaGGCTGAGCACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHTLTTE*AEHRMW
Trigger: CCACATTCTGTGCTCAGCTCACTCAGTGGTCAGCGT...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACGCTGACCACTGAGTaGGCTGAGCACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTTLTTE*AEHRMW
Trigger: CCACATTCTGTGCTCAGCTCACTCAGTGGTCAGCGT...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGGGAAACGCACATaGGAGGTAAAGTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHAGKRT*EVKCAG
Trigger: TCCTGCACACTTTACCTCTCATGTGCGTTTCCCGGC...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCAGGTCTGTCAGTGGCTaGTGGCTCTCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGRSVSG*WLSSCL
Trigger: GAGGCAGGAGGAGAGCCAGCAGCCACTGACAGACCT...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGGGTGCAGGAGCGTGTaGAAATGGCCTGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGGCRSV*KWPVKV
Trigger: CACCTTCACAGGCCATTTGCACACGCTCCTGCACCC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGCGCAGGCCACATCCTaGACTCCATGTCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPAQATS*TPCLRS
Trigger: AGACCTCAGACATGGAGTCCAGGATGTGGCCTGCGC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGCTCCATCACCTCGCATaGAGTCTGAGTTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALLHHLA*SLSWGV
Trigger: CACACCCCAACTCAGACTCCATGCGAGGTGATGGAG...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCGCCCCCGAACAGGAATaGCCGCAGGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GDRETNGVEWDETMTDEGAPEQE*PQGGRC
Trigger: GCACCTGCCACCCTGCGGCCATTCCTGTTCGGGGGC...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGCTGCACCCCAACATTaGGGGCATCACAGATTCACC +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGAAPQH*GHHRFT
Trigger: GGTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCACCCTCAGTGGGATaGGGGCTGTGCCGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: GDRETNGVEWDETMTDEGPPSVG*GLCRPL
Trigger: AAGGGGCCGGCACAGCCCCCATCCCACTGAGGGTGG...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRRSVCK*PVKVEV
Trigger: CACCTCCACCTTCACAGGCCATTTGCACACGCTCCT...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERRSVCK*PVKVEV
Trigger: CACCTCCACCTTCACAGGCCATTTGCACACGCTCCT...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACCGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHRKRGG*VFMRER
Trigger: TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCG...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPAAETR*VGVHEG
Trigger: TCCCTCATGAACACCCACCCACCTCGTTTCCGCAGC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGGTTCGAGGGGAGGATaGAGAGCCCTGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPGSRGG*RALSRR
Trigger: CCGCCTGCTCAGGGCTCTTCATCCTCCCCTCGAACC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAGCCGGGAAACGCACATaGGAGGTAAAGTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPAGKRT*EVKCAG
Trigger: TCCTGCACACTTTACCTCTCATGTGCGTTTCCCGGC...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGTCAGCCTTTACTGCATaGTTGGCGCGGCGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRSAFTA*LARRRD
Trigger: GTCGCGCCGCCGCGCCAAGCATGCAGTAAAGGCTGA...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR GCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAAGGCTTTCATGTGAGTaGACAAGGGTGGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPRLSCE*TRVGTG
Trigger: CCCTGTCCCCACCCTTGTGCACTCACATGAAAGCCT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGCTCCATCACCTCGCATaGAGTCTGAGTTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGLHHLA*SLSWGV
Trigger: CACACCCCAACTCAGACTCCATGCGAGGTGATGGAG...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGGGCCCAAAGGGAGGCTaGGAAGGGAGGACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRGPKGG*EGRTGS
Trigger: TGAGCCAGTCCTCCCTTCCCAGCCTCCCTTTGGGCC...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGTGCCGAGAGCGGACTaGGGACCCGAAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPVPRAD*GPEAGD
Trigger: GTCTCCTGCTTCGGGTCCCCAGTCCGCTCTCGGCAC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR CCA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAGCAGAGTTGGAGTTATaGGCAGCAGAGAATAGGACA +
Preference number: 4 (lower is better)
Translates to: GRADRIARGAGECSGWCAAELEL*AAENRT
Trigger: TGTCCTATTCTCTGCTGCCCATAACTCCAACTCTGC...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR GCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTCGGCTTGGTGGAGGTaGTCGCTCCCACACGCACAC +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPISAWWR*SLPHAH
Trigger: GTGTGCGTGTGGGAGCGAGCACCTCCACCAAGCCGA...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACGAGCCCATGAGGGGCTaGAAAACCATAGTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHEPMRG*KTIVQK
Trigger: TTTCTGGACTATGGTTTTGCAGCCCCTCATGGGCTC...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGCAGCACGCAGGGGCTaGGGAAACGAGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKAARRG*GNEVGG
Trigger: CCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACTCTGAAGACCTAAGTTaGCTTCCCTCTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHSEDLS*LPSLPS
Trigger: GGAGGGCAAAGAGGGAAGGCAACTTAGGTCTTCAGA...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCTTTACTGCATGCTTaGCGCGGCGGCGCGACGACT +
Preference number: 4 (lower is better)
Translates to: GDRETNGVEWDETMTDEGPLLHA*RGGATT
Trigger: AGTCGTCGCGCCGCCGCGCCAAGCATGCAGTAAAGG...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAACACGCACACATGACGTaGGGCCGAGGGGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKHAHMT*GRGASP
Trigger: AGGGGAGGCCCCTCGGCCCCACGTCATGTGTGCGTG...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCACCGAGGAGATCGGCTTaGTGGAGGTGCTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPPRRSA*WRCSLP
Trigger: TGGGAGCGAGCACCTCCACCAAGCCGATCTCCTCGG...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGGCATGGAGTCTGAGTTaGGGTGTGGGGTTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRAWSLS*GVGLRA
Trigger: GGCTCGCAACCCCACACCCCAACTCAGACTCCATGC...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGTTCAACTGGAAGGCTaGAGCCCCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPVQLEG*SPLGVG
Trigger: CCCCACCCCAAGGGGGCTCCAGCCTTCCAGTTGAAC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGCTGCACCCCAACATTaGGGGCATCACAGATTCACC +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGAAPQH*GHHRFT
Trigger: GGTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACCTGAAGTCCAGAGAATaGCACACACACAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHLKSRE*HTHRQP
Trigger: TGGCTGTCTGTGTGTGTGCCATTCTCTGGACTTCAG...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACCAAAGAGGGCAGAGTTaGAGTTATGGGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AGAAETRWVGVHEGESEHQRGQS*SYGQQR
Trigger: TCTCTGCTGCCCATAACTCCAACTCTGCCCTCTTTG...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR TCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGGAAGTCACAGATATGTaGGGCCCCCACCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVREVTDM*GPHLQE
Trigger: CTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTC...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGAACATGAGAGTCAGCTaGGCGGAGCGGTATGGACGG +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRNMRVS*AERYGR
Trigger: CCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTT...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCACAGTAATTCAAGATaGTCACCACAAGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWHSNSR*SPQEEE
Trigger: TTCTTCTTCTTGTGGTGATCATCTTGAATTACTGTG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGCCCTCCCATCCCATTaGCCCTGCCCTCACCGGTTC +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKALPSH*PCPHRF
Trigger: GAACCGGTGAGGGCAGGGGCAATGGGATGGGAGGGC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCGGGATTGGCAGAGTTaGGGTCCCCTCCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: GDRETNGVEWDETMTDEGRDWQS*GPLHPL
Trigger: GAGAGGATGGAGGGGACCCCAACTCTGCCAATCCCG...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCCGGGATTGGCAGAGTTaGGGTCCCCTCCATCCTCTC +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIRDWQS*GPLHPL
Trigger: GAGAGGATGGAGGGGACCCCAACTCTGCCAATCCCG...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGTGAGTGCACAAGGGTaGGGACAGGGACCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIVSAQG*GQGPEV
Trigger: GACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCAC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACGCTGAGCACAGAATGTaGGAAGGAGAGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHAEHRM*EGESAN
Trigger: ATTTGCACTCTCTCCTTCCCACATTCTGTGCTCAGC...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAACAAATGGTGTGGAATaGGACGAGACCATGACCGAT +
Preference number: 4 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERTNGVE*DETMTD
Trigger: ATCGGTCATGGTCTCGTCCCATTCCACACCATTTGT...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGCTGGGGGTGAAGTCTaGGGCCTCACTACCCCATTC +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIAGGEV*GLTTPF
Trigger: GAATGGGGTAGTGAGGCCCCAGACTTCACCCCCAGC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGCTGAAGTCCAGAGAATaGCACACACACAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: ETREHESQLSGAVWTGRGLKSRE*HTHRQP
Trigger: TGGCTGTCTGTGTGTGTGCCATTCTCTGGACTTCAG...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAACTCCCAGAGAGGAGCTaGTCCAGCCCCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKLPERS*SSPLGR
Trigger: CCTCCCAAGGGGGCTGGACCAGCTCCTCTCTGGGAG...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR TCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCAACATGAGAGTCAGCTaGGCGGAGCGGTATGGACGG +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPINMRVS*AERYGR
Trigger: CCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTT...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGTGTGCAGGAAACGCTaGCCACTGAGTGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIVCRKR*PLSELS
Trigger: GCTCAGCTCACTCAGTGGTCAGCGTTTCCTGCACAC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPNGTRP*PMRAQG
Trigger: TCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATT...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCAATGGGACGAGACCATaGCCGATGAGGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GDRETNGVEWDETMTDEGNGTRP*PMRAQG
Trigger: TCCTTGGGCCCTCATCGGTCATGGTCTCGTCCCATT...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGGCCTCCTGCTTGGCTaGACCCCAACATTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKGLLLG*TPTLGA
Trigger: TGCCCCCAATGTTGGGGTGCAGCCAAGCAGGAGGCC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTTCAAGACAAAGAGGGGGAATCAAGGTTAAGAGGGCAGAGTTGTCTTAGACAACATGGTGGGGAGGTTTaGCCCGCGGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VQDKEGESRLRGQSCLRQHGGEV*PAAGRW
Trigger: CCAGCGCCCTGCCGCGGGCCAAACCTCCCCACCATG...TTGTCTAAGACAACTCTGCCCTCTTAACCTTGATTCCCCCTCTTTGTCTTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGCGCAGGCCACATCCTaGACTCCATGTCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPAQATS*TPCLRS
Trigger: AGACCTCAGACATGGAGTCCAGGATGTGGCCTGCGC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAATAGCCCAGGGGTATTaGGATGAGGGCGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKIAQGY*DEGGPS
Trigger: GGAGGGGCCGCCCTCATCCCAATACCCCTGGGCTAT...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCTCCATCACCTCGCATaGAGTCTGAGTTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRLHHLA*SLSWGV
Trigger: CACACCCCAACTCAGACTCCATGCGAGGTGATGGAG...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGTTCAACTGGAAGGCTaGAGCCCCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKVQLEG*SPLGVG
Trigger: CCCCACCCCAAGGGGGCTCCAGCCTTCCAGTTGAAC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCGGAAACGAGGTGGGTaGGTGTTCATGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRRKRGG*VFMRER
Trigger: TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCG...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAGACAGAGAAACAAATaGTGTGGAATGGGACGAGAC +
Preference number: 4 (lower is better)
Translates to: RESGKGRVDLEAELPMALRQRNK*CGMGRD
Trigger: GTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCT...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAACAGGACTTGCCGACGTaGTCTTGGGACCCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKQDLPT*SWDPRR
Trigger: TCTCCTCGGGTCCCAAGATCACGTCGGCAAGTCCTG...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAACGCTGACCACTGAGTaGGCTGAGCACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPTLTTE*AEHRMW
Trigger: CCACATTCTGTGCTCAGCTCACTCAGTGGTCAGCGT...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGTGCCAGGCAGGACTTaGCGACGTGATCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKVPGRT*RRDLGT
Trigger: GGTCCCAAGATCACGTCGGCAAGTCCTGCCTGGCAC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCAGGAGCGTGTGCAAATaGCCTGTGAAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIRSVCK*PVKVEV
Trigger: CACCTCCACCTTCACAGGCCATTTGCACACGCTCCT...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACAACATCAGGCGCTGAGCACAGAATGTaGGAAGGAGAGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: WVFMRERVSTPHTTTTSGAEHRM*EGESAN
Trigger: ATTTGCACTCTCTCCTTCCCACATTCTGTGCTCAGC...GCCTGATGTTGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCAAGACAGAGAAACAAATaGTGTGGAATGGGACGAGAC +
Preference number: 4 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPRQRNK*CGMGRD
Trigger: GTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCT...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GTTCAAGACAAAGAGGGGGAATCAAGGTTAAGAGGGCAGAGTTGTCTTAGACAACTCAGGGCACCTTGCTaGCCTGAGGGTCTGCGTCGC +
Preference number: 4 (lower is better)
Translates to: VQDKEGESRLRGQSCLRQLRAPC*PEGLRR
Trigger: GCGACGCAGACCCTCAGGGCAGCAAGGTGCCCTGAG...TTGTCTAAGACAACTCTGCCCTCTTAACCTTGATTCCCCCTCTTTGTCTTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGCTGCGGAAACGAGGTaGGTGGGTGTTCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKAAETR*VGVHEG
Trigger: TCCCTCATGAACACCCACCCACCTCGTTTCCGCAGC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR TCA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGACACAGTAATTCAAGATaGTCACCACAAGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGHSNSR*SPQEEE
Trigger: TTCTTCTTCTTGTGGTGATCATCTTGAATTACTGTG...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGAGCCCATGAGGGGCTaGAAAACCATAGTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPEPMRG*KTIVQK
Trigger: TTTCTGGACTATGGTTTTGCAGCCCCTCATGGGCTC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCACTGAAGTCCAGAGAATaGCACACACACAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPLKSRE*HTHRQP
Trigger: TGGCTGTCTGTGTGTGTGCCATTCTCTGGACTTCAG...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTTCAAGACAAAGAGGGGGAATCAAGGTTAAGAGGGCAGAGTTGTCTTAGACAAGGCCCAAAGGGAGGCTaGGAAGGGAGGACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQDKEGESRLRGQSCLRQGPKGG*EGRTGS
Trigger: TGAGCCAGTCCTCCCTTCCCAGCCTCCCTTTGGGCC...TTGTCTAAGACAACTCTGCCCTCTTAACCTTGATTCCCCCTCTTTGTCTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGCTGAGCACAGAATGTaGGAAGGAGAGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPAEHRM*EGESAN
Trigger: ATTTGCACTCTCTCCTTCCCACATTCTGTGCTCAGC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGAGACAGAGAAACAAATaGTGTGGAATGGGACGAGAC +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRRQRNK*CGMGRD
Trigger: GTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCT...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GTTCAAGACAAAGAGGGGGAATCAAGGTTAAGAGGGCAGAGTTGTCTTAGACAAGCTGGGGGTGAAGTCTaGGGCCTCACTACCCCATTC +
Preference number: 4 (lower is better)
Translates to: VQDKEGESRLRGQSCLRQAGGEV*GLTTPF
Trigger: GAATGGGGTAGTGAGGCCCCAGACTTCACCCCCAGC...TTGTCTAAGACAACTCTGCCCTCTTAACCTTGATTCCCCCTCTTTGTCTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CCA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGAAAGGGAAGGGCAAATaGGAGTCCCTTTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRKGKGK*ESLSHV
Trigger: TACATGAGAAAGGGACTCCCATTTGCCCTTCCCTTT...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR GCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGAGCCCATGAGGGGCTaGAAAACCATAGTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKEPMRG*KTIVQK
Trigger: TTTCTGGACTATGGTTTTGCAGCCCCTCATGGGCTC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAAAAGGGAAGGGCAAATaGGAGTCCCTTTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: DRETNGVEWDETMTDEGPKGKGK*ESLSHV
Trigger: TACATGAGAAAGGGACTCCCATTTGCCCTTCCCTTT...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CCA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAAAAGGGAAGGGCAAATaGGAGTCCCTTTCTCATGTA +
Preference number: 4 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKKGKGK*ESLSHV
Trigger: TACATGAGAAAGGGACTCCCATTTGCCCTTCCCTTT...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS GCA 90 bp AGGCAGGGAGTGCCGAGAGCGGACTGGGGACCCGAAGCAGGAGACTaGGCGGAGCCGCCCGCCGAGCCGAGGCGGGATGGAGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RQGVPRADWGPEAGD*AEPPAEPRRDGGSR
Trigger: GCGGCTGCCTCCATCCCGCCTCGGCTCGGCGGGCGGCTCCGCGCAGTCTCCTGCTTCGGGTCCCCAGTCCGCTCTCGGCACTCCCTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS CCA 90 bp GAGGTCGGCGAAGGGACCCCGAGGCAGGGAGTGCCGAGAGCGGACTaGGGACCCGAAGCAGGAGACTGCGCGGAGCCGCCCGCCGAGCCG +
Preference number: 5 (lower is better)
Translates to: EVGEGTPRQGVPRAD*GPEAGDCAEPPAEP
Trigger: CGGCTCGGCGGGCGGCTCCGCGCAGTCTCCTGCTTCGGGTCCCCAGTCCGCTCTCGGCACTCCCTGCCTCGGGGTCCCTTCGCCGACCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS-3UTR CAA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGCCCTTGGCCTCCTGCTaGGCTGCACCCCAACATTGG +
Preference number: 5 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWPLASC*AAPQHW
Trigger: CCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGGG...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGCTGGTCCAGCCCCCTaGGGAGGGCCAGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGAGPAP*GGPGAV
Trigger: CACAGCCCCTGGCCCTCCCAAGGGGGCTGGACCAGC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CAA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGGCTGTGCCGGCCCCTaGGCCTCCTGCTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RESGKGRVDLEAELPMALGCAGP*ASCLAA
Trigger: TGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGCC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGCTGTGCCGGCCCCTaGGCCTCCTGCTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGGCAGP*ASCLAA
Trigger: TGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGCC...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGCCTTTACTGCATGCTaGGCGCGGCGGCGCGACGAC +
Preference number: 5 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERAFTAC*ARRRDD
Trigger: GTCGTCGCGCCGCCGCGCCAAGCATGCAGTAAAGGC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR CAA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGACCCGAGGAGATCGGCTaGGTGGAGGTGCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERPEEIG*VEVLAP
Trigger: GGGAGCGAGCACCTCCACCAAGCCGATCTCCTCGGG...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGCCCGAGGAGATCGGCTaGGTGGAGGTGCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRPEEIG*VEVLAP
Trigger: GGGAGCGAGCACCTCCACCAAGCCGATCTCCTCGGG...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGTCCAGAAATCCGGGATaGGCAGAGTTGGGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWSRNPG*AELGSP
Trigger: AGGGGACCCCAACTCTGCCAATCCCGGATTTCTGGA...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CCTCCCACCCACCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGAAGGGAAGGGTAGACTaGGAGGCAGAGCTCCCGATG +
Preference number: 5 (lower is better)
Translates to: PPTHLWSSTQGLRKRGGWKGRVD*EAELPM
Trigger: CATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTT...CCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGGTGGGTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGCGCATGGAGTCTGAGTaGGGGTGTGGGGTTGCGAGC +
Preference number: 5 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRRMESE*GCGVAS
Trigger: GCTCGCAACCCCACACCCCAACTCAGACTCCATGCG...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGCCCTTGGCCTCCTGCTaGGCTGCACCCCAACATTGG +
Preference number: 5 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRPLASC*AAPQHW
Trigger: CCAATGTTGGGGTGCAGCCAAGCAGGAGGCCAAGGG...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGACTTGCCGACGTGATCTaGGGACCCGAGGAGATCGGC +
Preference number: 5 (lower is better)
Translates to: RVGTGTRSHRYVRPPPAGLADVI*GPEEIG
Trigger: GCCGATCTCCTCGGGTCCCAAGATCACGTCGGCAAG...TCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACCTTGCCGACGTGATCTaGGGACCCGAGGAGATCGGC +
Preference number: 5 (lower is better)
Translates to: LRKRGGWVFMRERVSTPHLADVI*GPEEIG
Trigger: GCCGATCTCCTCGGGTCCCAAGATCACGTCGGCAAG...GTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGACCGGGATTGGCAGAGTaGGGGTCCCCTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERPGLAE*GSPPSS
Trigger: AGAGGATGGAGGGGACCCCAACTCTGCCAATCCCGG...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGGGAGTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGGAGCTCCCGATGGCCTaGAACCAGCTGACTCCGGTC +
Preference number: 5 (lower is better)
Translates to: RESGKGRVDLEAELPMALELPMA*NQLTPV
Trigger: GACCGGAGTCAGCTGGTTCAAGGCCATCGGGAGCTC...CAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGACTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGGAGCTCCCGATGGCCTaGAACCAGCTGACTCCGGTC +
Preference number: 5 (lower is better)
Translates to: KGGDRDPKSQICEAPTCRELPMA*NQLTPV
Trigger: GACCGGAGTCAGCTGGTTCAAGGCCATCGGGAGCTC...CCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GGGCGAGCAGATAGGATTGCCCGTGGGGCTGGGGAGTGTTCCGGGTGGTGTGCAAGTTGCCTTCCCTCTTaGCCCTCCCATCCCATTGCC +
Preference number: 5 (lower is better)
Translates to: GRADRIARGAGECSGWCASCLPS*PSHPIA
Trigger: GGCAATGGGATGGGAGGGCAAAGAGGGAAGGCAACT...TGCACACCACCCGGAACACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS-3UTR CAA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGCCGGGATTGGCAGAGTaGGGGTCCCCTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: ETREHESQLSGAVWTGRGPGLAE*GSPPSS
Trigger: AGAGGATGGAGGGGACCCCAACTCTGCCAATCCCGG...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCCCACCTGCAGGAGGTCCAGAAATCCGGGATaGGCAGAGTTGGGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: GGDRDPKSQICEAPTCRRSRNPG*AELGSP
Trigger: AGGGGACCCCAACTCTGCCAATCCCGGATTTCTGGA...CCTCCTGCAGGTGGGGGCCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GAGACGAGAGAACATGAGAGTCAGCTGAGCGGAGCGGTATGGACGGGGAGAGGGGAGCTCCCGATGGCCTaGAACCAGCTGACTCCGGTC +
Preference number: 5 (lower is better)
Translates to: ETREHESQLSGAVWTGRGELPMA*NQLTPV
Trigger: GACCGGAGTCAGCTGGTTCAAGGCCATCGGGAGCTC...CCCTCTCCCCGTCCATACCGCTCCGCTCAGCTGACTCTCATGTTCTCTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CCTCTGGAGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGAAGGGAAGGGTAGACTaGGAGGCAGAGCTCCCGATG +
Preference number: 5 (lower is better)
Translates to: PLEQHAGAAETRWVGVHEKGRVD*EAELPM
Trigger: CATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTT...CTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCTCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCCCGAGGAGATCGGCTaGGTGGAGGTGCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRPEEIG*VEVLAP
Trigger: GGGAGCGAGCACCTCCACCAAGCCGATCTCCTCGGG...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACATCCAGAAATCCGGGATaGGCAGAGTTGGGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTSRNPG*AELGSP
Trigger: AGGGGACCCCAACTCTGCCAATCCCGGATTTCTGGA...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACCGGTCCCAGCAGAACTaGAAGATGATGCCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: AGAAETRWVGVHEGESEHRSQQN*KMMPVA
Trigger: GGCCACTGGCATCATCTTCAAGTTCTGCTGGGACCG...GTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp AGCAGCACGCAGGGGCTGCGGAAACGAGGTGGGTGGGTGTTCATGAGGGAGAGAGGCTGCACCCCAACATaGGGGGCATCACAGATTCAC +
Preference number: 5 (lower is better)
Translates to: SSTQGLRKRGGWVFMRERGCTPT*GASQIH
Trigger: GTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGCC...TCTCTCCCTCATGAACACCCACCCACCTCGTTTCCGCAGCCCCTGCGTGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCGGCTGTGCCGGCCCCTaGGCCTCCTGCTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GDRETNGVEWDETMTDEGGCAGP*ASCLAA
Trigger: TGCAGCCAAGCAGGAGGCCAAGGGGCCGGCACAGCC...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CAAATGGGAGTCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCGCCTTTACTGCATGCTaGGCGCGGCGGCGCGACGAC +
Preference number: 5 (lower is better)
Translates to: QMGVPFSCSAAGDSPKPIAFTAC*ARRRDD
Trigger: GTCGTCGCGCCGCCGCGCCAAGCATGCAGTAAAGGC...GATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGACTCCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320591.9
ENST00000534837.6
CDS-3UTR CAA 90 bp GTCCGGGAAGGGAAGGGTAGACTTGGAGGCAGAGCTCCCGATGGCCTTGAACCACGGTCCCAGCAGAACTaGAAGATGATGCCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VREGKGRLGGRAPDGLEPRSQQN*KMMPVA
Trigger: GGCCACTGGCATCATCTTCAAGTTCTGCTGGGACCG...TGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp CGAGGTGGGTGGGTGTTCATGAGGGAGAGAGTGAGCACGCCGCACACCACCACACCAAAGAGGGCAGAGTaGGAGTTATGGGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: RGGWVFMRERVSTPHTTTPKRAE*ELWAAE
Trigger: CTCTGCTGCCCATAACTCCAACTCTGCCCTCTTTGG...TGTGGTGGTGTGCGGCGTGCTCACTCTCTCCCTCATGAACACCCACCCACCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534837.6
CDS GCA 90 bp TCATCCACCAATTCTACCCGCATCTGCCCTCCCAGGCCACCCAGCTaGCAGCTATGCGGCTGCACCCAGGATTCACTGGTTGTTAGCATC +
Preference number: 5 (lower is better)
Translates to: SSTNSTRICPPRPPS*QLCGCTQDSLVVSI
Trigger: GATGCTAACAACCAGTGAATCCTGGGTGCAGCCGCATAGCTGGCAGCTGGGTGGCCTGGGAGGGCAGATGCGGGTAGAATTGGTGGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542740.1
CDS-3UTR CAA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCGGCGAGCAGATAGGATaGCCCGTGGGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: GDRETNGVEWDETMTDEGGEQIG*PVGLGS
Trigger: ACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCC...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCAGGCGAGCAGATAGGATaGCCCGTGGGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: DRETNGVEWDETMTDEGPGEQIG*PVGLGS
Trigger: ACTCCCCAGCCCCACGGGCAATCCTATCTGCTCGCC...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GGAGACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCTTGCCGACGTGATCTaGGGACCCGAGGAGATCGGC +
Preference number: 5 (lower is better)
Translates to: GDRETNGVEWDETMTDEGLADVI*GPEEIG
Trigger: GCCGATCTCCTCGGGTCCCAAGATCACGTCGGCAAG...GCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp GACAGAGAAACAAATGGTGTGGAATGGGACGAGACCATGACCGATGAGGGCCCACGCATGGAGTCTGAGTaGGGGTGTGGGGTTGCGAGC +
Preference number: 5 (lower is better)
Translates to: DRETNGVEWDETMTDEGPRMESE*GCGVAS
Trigger: GCTCGCAACCCCACACCCCAACTCAGACTCCATGCG...TGGGCCCTCATCGGTCATGGTCTCGTCCCATTCCACACCATTTGTTTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGCGGTCCCAGCAGAACTaGAAGATGATGCCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRRSQQN*KMMPVA
Trigger: GGCCACTGGCATCATCTTCAAGTTCTGCTGGGACCG...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp TCATGTGAGTGCACAAGGGTGGGGACAGGGACCCGAAGTCACAGATATGTGAGGGGCTGCACCCCAACATaGGGGGCATCACAGATTCAC +
Preference number: 5 (lower is better)
Translates to: SCECTRVGTGTRSHRYVRGCTPT*GASQIH
Trigger: GTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGCC...CCTCACATATCTGTGACTTCGGGTCCCTGTCCCCACCCTTGTGCACTCACATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAACGCATGGAGTCTGAGTaGGGGTGTGGGGTTGCGAGC +
Preference number: 5 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKRMESE*GCGVAS
Trigger: GCTCGCAACCCCACACCCCAACTCAGACTCCATGCG...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAAGGCTGCACCCCAACATaGGGGGCATCACAGATTCAC +
Preference number: 5 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKGCTPT*GASQIH
Trigger: GTGAATCTGTGATGCCCCCAATGTTGGGGTGCAGCC...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS-3UTR CAA 90 bp TCCCTTTCTCATGTAGTGCAGCAGGCGACTCCCCAAAACCCATCTGTCAGAAAATTTCAGCCTTTACTGTaGTGCGCAGGAGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: SLSHVVQQATPQNPSVRKFQPLL*CAGDEL
Trigger: CAGCTCGTCTCCTGCGCACAACAGTAAAGGCTGAAA...TTTTCTGACAGATGGGTTTTGGGGAGTCGCCTGCTGCACTACATGAGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS GCA 72 bp GTGCCGAGAGCGGACTGGGGACCCGAAGCAGGAGACTaGGCGGAGCCGCCCGCCGAGCCGAGGCGGGATGGA +
Preference number: 6 (lower is better)
Translates to: VPRADWGPEAGD*AEPPAEPRRDG
Trigger: TCCATCCCGCCTCGGCTCGGCGGGCGGCTCCGCGCAGTCTCCTGCTTCGGGTCCCCAGTCCGCTCTCGGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS CCA 72 bp GAAGGGACCCCGAGGCAGGGAGTGCCGAGAGCGGACTaGGGACCCGAAGCAGGAGACTGCGCGGAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: EGTPRQGVPRAD*GPEAGDCAEPP
Trigger: GGGCGGCTCCGCGCAGTCTCCTGCTTCGGGTCCCCAGTCCGCTCTCGGCACTCCCTGCCTCGGGGTCCCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540656.5
CDS TCA 72 bp GGCTGGGGGTGCAGTGCCAGGCAGGACTTGCCGACGTaGTCTTGGGACCCGAGGAGATCGGCTTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: GWGCSARQDLPT*SWDPRRSAWWR
Trigger: CCTCCACCAAGCCGATCTCCTCGGGTCCCAAGATCACGTCGGCAAGTCCTGCCTGGCACTGCACCCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
ENST00000542740.1
ENST00000545917.5
CDS CCA 72 bp AGGGCACCTTGCTGCCCTGAGGGTCTGCGTCGCTTCTaGCTGCGGTCCCAGCAGAACTTGAAGATGATGCCA +
Preference number: 6 (lower is better)
Translates to: RAPCCPEGLRRF*LRSQQNLKMMP
Trigger: TGGCATCATCTTCAAGTTCTGCTGGGACCGCAGCCAGAAGCGACGCAGACCCTCAGGGCAGCAAGGTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
CDS CAA 90 bp CAGCTATGCGGCTGCACCCAGGATTCACTGGTTGTTAGCATCCTTTaGGGGGAAAAACTCCAGCGTGGTTGCCTGACCAGACTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: QLCGCTQDSLVVSIL*GEKLQRGCLTRLQP
Trigger: GGGCTGGAGTCTGGTCAGGCAACCACGCTGGAGTTTTTCCCCCAAAAGGATGCTAACAACCAGTGAATCCTGGGTGCAGCCGCATAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542740.1
CDS CCA 72 bp CAAAACCATAGTCCAGAAATCCGGGATTGGCAGAGTTaGGGTCCCCTCCATCCTCTCGAGACACGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: QNHSPEIRDWQS*GPLHPLETRWD
Trigger: GTCCCACCGTGTCTCGAGAGGATGGAGGGGACCCCAACTCTGCCAATCCCGGATTTCTGGACTATGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320591.9
ENST00000534837.6
ENST00000540656.5
ENST00000545917.5
CDS CAA 72 bp GGCTGCACCCAGGATTCACTGGTTGTTAGCATCCTTTaGGGGGAAAAACTCCAGCGTGGTTGCCTGACCAGA +
Preference number: 6 (lower is better)
Translates to: GCTQDSLVVSIL*GEKLQRGCLTR
Trigger: TCTGGTCAGGCAACCACGCTGGAGTTTTTCCCCCAAAAGGATGCTAACAACCAGTGAATCCTGGGTGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542740.1