RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PI15 (Homo sapiens)

Ensembl gene IDs: ENSG00000137558

Ensembl transcript IDs: ENST00000260113.7, ENST00000523773.1, ENST00000649643.1

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCATACAATACTCAAAGACCCAAGATGATAAGTAGATTGATTCAATaGCAGACTAAACAACAAAGAGATAGAGGTGCCCTCAGCACCTCC +
Preference number: 1 (lower is better)
Translates to: SYNTQRPKMISRLIQ*QTKQQRDRGALSTS
Trigger: GGAGGTGCTGAGGGCACCTCTATCTCTTTGTTGTTTAGTCTGTCATTGAATCAATCTACTTATCATCTTGGGTCTTTGAGTATTGTATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR TCA 90 bp TCTTTCCTTCCCCTTCTCATTCCAAGCACTGTAACTAAATTCCCATaGGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTATT +
Preference number: 1 (lower is better)
Translates to: SFLPLLIPSTVTKFP*EAEALCIYCTAWLI
Trigger: AATAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAGTTACAGTGCTTGGAATGAGAAGGGGAAGGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR TCA 90 bp TTTCCACATGAAAACCTTAATACTGACAATTTAAAGCTGCTTTTATaGAATAGCTTATACCCAGACCATTTCTGCCTCTGGCAATTACAG +
Preference number: 1 (lower is better)
Translates to: FPHENLNTDNLKLLL*NSLYPDHFCLWQLQ
Trigger: CTGTAATTGCCAGAGGCAGAAATGGTCTGGGTATAAGCTATTTCATAAAAGCAGCTTTAAATTGTCAGTATTAAGGTTTTCATGTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR CAA 90 bp TTCCTAAACACTTTGGTAGGTAAGAGCTTCCATCTATGTCAACATTaGCATCCTTCGATACTGCAGAGCCTGGGTATATGGCTACACAGG +
Preference number: 2 (lower is better)
Translates to: FLNTLVGKSFHLCQH*HPSILQSLGIWLHR
Trigger: CCTGTGTAGCCATATACCCAGGCTCTGCAGTATCGAAGGATGCAAATGTTGACATAGATGGAAGCTCTTACCTACCAAAGTGTTTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR TCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCATCCTTTGTCTCCTGCTaGGAGGCCTCAAGATGTACT +
Preference number: 2 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSSFVSC*EASRCT
Trigger: AGTACATCTTGAGGCCTCTCAGCAGGAGACAAAGGA...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTATATATTGCACAGCATaGCTTATTACTTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCIYCTA*LITCST
Trigger: GGTGGAGCAAGTAATAAGCCATGCTGTGCAATATAT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR CAA 90 bp AGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTATTACTaGCTCCACCTACAGGTAAATACTGCTGTGTCTGCTTCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: RSRSFMYILHSMAYY*LHLQVNTAVSASFK
Trigger: TTTGAAGGAAGCAGACACAGCAGTATTTACCTGTAGGTGGAGCAAGTAATAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTGTAACTAAATTCCCATaGGAAGCAGAAGCTTTATGT +
Preference number: 2 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCVTKFP*EAEALC
Trigger: ACATAAAGCTTCTGCTTCTCATGGGAATTTAGTTAC...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTACTTCATTGGTTTTCTaGGGGTCTTACTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCTSLVF*GSYFLF
Trigger: AAACAGAAAGTAAGACCCTCAGAAAACCAATGAAGT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR GCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACACAGCTGTACAATCTaGTCCAGAAATCTTGGCATT +
Preference number: 2 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSHSCTI*SRNLGI
Trigger: AATGCCAAGATTTCTGGAGCAGATTGTACAGCTGTG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR GCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATATTAAACAGAGTTCCTaGCAAAGAGGGGCTCATGAA +
Preference number: 2 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNIKQSS*QRGAHE
Trigger: TTCATGAGCCCCTCTTTGGCAGGAACTCTGTTTAAT...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR CCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATCTCCACATCTCTTTTTaGAATCCTTTGTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNLHISF*NPLSPA
Trigger: AGCAGGAGACAAAGGATTCCAAAAAGAGATGTGGAG...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR TCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAAAAATATCTCCAGGGTaGAATTCGTGGTTGCTTAAT +
Preference number: 2 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRKISPG*NSWLLN
Trigger: ATTAAGCAACCACGAATTTCACCCTGGAGATATTTT...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR TCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCATTGTTGCATGCTGTaGAAAATATGGCAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: FCLSNKTQDAVICIQAPAHCCML*KIWQAV
Trigger: CACAGCCTGCCATATTTTTCACAGCATGCAACAATG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR GCA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTACCTACAGGTAAATACTaGTGTGTCTGCTTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLPTGKY*CVCFLQ
Trigger: TTGAAGGAAGCAGACACAGCAGTATTTACCTGTAGG...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR GCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACCCTACAGGTAAATACTaGTGTGTCTGCTTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYPTGKY*CVCFLQ
Trigger: TTGAAGGAAGCAGACACAGCAGTATTTACCTGTAGG...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CCA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGAATCATGACTGTGTGTaGTGTGCACGAAGGATCTTT +
Preference number: 2 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKNHDCV*CARRIF
Trigger: AAAGATCCTTCGTGCACACCACACACAGTCATGATT...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR TCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAACTAAGCGGAAGGCATaGTTTGAGAACTTATATAAG +
Preference number: 2 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSTKRKA*FENLYK
Trigger: CTTATATAAGTTCTCAAATCATGCCTTCCGCTTAGT...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAGAACTTATATAAGTTaGCATTATCCTTTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISRTYIS*HYPLVD
Trigger: GTCCACCAAAGGATAATGCCAACTTATATAAGTTCT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR TCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACAAAATATCTCCAGGGTaGAATTCGTGGTTGCTTAAT +
Preference number: 2 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYKISPG*NSWLLN
Trigger: ATTAAGCAACCACGAATTTCACCCTGGAGATATTTT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR TCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACGTAACTAAATTCCCATaGGAAGCAGAAGCTTTATGT +
Preference number: 2 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYVTKFP*EAEALC
Trigger: ACATAAAGCTTCTGCTTCTCATGGGAATTTAGTTAC...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR CAA 90 bp AAAATCACTAGTCTGCATTATTTCCTGAATACTTTTGTGAGCTTCTaGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAATA +
Preference number: 2 (lower is better)
Translates to: KITSLHYFLNTFVSF*RAGTMSNYLCIIRI
Trigger: TATTCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAAAGTATTCAGGAAATAATGCAGACTAGTGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR TCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCAAGCCAATATTCCATaGATAAGCTTCCCTTTCAAT +
Preference number: 2 (lower is better)
Translates to: FCLSNKTQDAVICIQAPAQANIP*ISFPFN
Trigger: ATTGAAAGGGAAGCTTATTCATGGAATATTGGCTTG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR CAA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTACTTTTGTGAGCTTCTaGAGGGCGGGAACCATGTCT +
Preference number: 3 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFTFVSF*RAGTMS
Trigger: AGACATGGTTCCCGCCCTCAAGAAGCTCACAAAAGT...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR GCA 72 bp GCTTCCATCTATGTCAACATTTGCATCCTTCGATACTaGAGAGCCTGGGTATATGGCTACACAGGAAGAACC +
Preference number: 3 (lower is better)
Translates to: ASIYVNICILRY*RAWVYGYTGRT
Trigger: GGTTCTTCCTGTGTAGCCATATACCCAGGCTCTGCAGTATCGAAGGATGCAAATGTTGACATAGATGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR CCA 72 bp TATGTCAACATTTGCATCCTTCGATACTGCAGAGCCTaGGTATATGGCTACACAGGAAGAACCTACACCAAA +
Preference number: 3 (lower is better)
Translates to: YVNICILRYCRA*VYGYTGRTYTK
Trigger: TTTGGTGTAGGTTCTTCCTGTGTAGCCATATACCCAGGCTCTGCAGTATCGAAGGATGCAAATGTTGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR CAA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTAGCATGGCTTATTACTaGCTCCACCTACAGGTAAAT +
Preference number: 3 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCSMAYY*LHLQVN
Trigger: ATTTACCTGTAGGTGGAGCAAGTAATAAGCCATGCT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CAA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTCAGAAATCTTGGCATTaGTTAATTCTTTCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCQKSWH*LILSFP
Trigger: GGGGAAGGAAAGAATTAACAAATGCCAAGATTTCTG...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR TCA 72 bp CCCCTTCTCATTCCAAGCACTGTAACTAAATTCCCATaGGAAGCAGAAGCTTTATGTATATATTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: PLLIPSTVTKFP*EAEALCIYCTA
Trigger: TGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAGTTACAGTGCTTGGAATGAGAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR TCA 72 bp ATTGTTGCATGCTGTGAAAAATATGGCAGGCTGTGTTaGTACCAGCAAACTTTCATTTGCTTTAGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: IVACCEKYGRLC*YQQTFICFSLE
Trigger: TTCCAGGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCACAGCATGCAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR CAA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAAGTTGGCATTATCCTTaGGTGGACTCAAATAAGAAA +
Preference number: 3 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRSWHYP*VDSNKK
Trigger: TTTCTTATTTGAGTCCACCAAAGGATAATGCCAACT...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CAA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAGAGAACTTATATAAGTaGGCATTATCCTTTGGTGGA +
Preference number: 3 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRENLYK*ALSFGG
Trigger: TCCACCAAAGGATAATGCCAACTTATATAAGTTCTC...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CAA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAAGCGGAAGGCATGATTaGAGAACTTATATAAGTTGG +
Preference number: 3 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSSGRHD*RTYISW
Trigger: CCAACTTATATAAGTTCTCAAATCATGCCTTCCGCT...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CAA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACAGAAATCTTGGCATTaGTTAATTCTTTCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSQKSWH*LILSFP
Trigger: GGGGAAGGAAAGAATTAACAAATGCCAAGATTTCTG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CAA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGATATGGCAGGCTGTGTaGATACCAGCAAACTTTCAT +
Preference number: 3 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKIWQAV*IPANFH
Trigger: ATGAAAGTTTGCTGGTATCAACACAGCCTGCCATAT...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR CAA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAAGTTGGCATTATCCTTaGGTGGACTCAAATAAGAAA +
Preference number: 3 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTSWHYP*VDSNKK
Trigger: TTTCTTATTTGAGTCCACCAAAGGATAATGCCAACT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR-3UTR CAA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATAATTCAGCAACAAAATaGGAACTTAGTGTAGCCATC +
Preference number: 3 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNNSATK*ELSVAI
Trigger: GATGGCTACACTAAGTTCCAATTTTGTTGCTGAATT...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
3UTR-3UTR CAA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACGAGAACTTATATAAGTaGGCATTATCCTTTGGTGGA +
Preference number: 3 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYENLYK*ALSFGG
Trigger: TCCACCAAAGGATAATGCCAACTTATATAAGTTCTC...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAGGCAACTCTGCTGCGTaGTGGGCCACAGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTGNSAA*WATEGM
Trigger: CATCCCTTCTGTGGCCCATCACGCAGCAGAGTTGCC...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCGTAGGGCAACTCTGCTaGGTGATGGGCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALAVGQLC*VMGHRR
Trigger: CCTTCTGTGGCCCATCACGCAGCAGAGTTGCCCTAC...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATATTTGCTGCCGGTaGGAACACTTTGCCCCGAAC +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFHICCR*EHFAPN
Trigger: GTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTTCCTTTGTCTCCTGCTaGGAGGCCTCAAGATGTACT +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFSFVSC*EASRCT
Trigger: AGTACATCTTGAGGCCTCTCAGCAGGAGACAAAGGA...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTGCATACCAAGTAAACTaGACGTCGCCACACAGATCC +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFAYQVN*TSPHRS
Trigger: GGATCTGTGTGGCGACGTGCAGTTTACTTGGTATGC...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTGCTTCCGCCTGGCTTTaGGGATATCCGCTGAATCTA +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCASAWL*GYPLNL
Trigger: TAGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGC...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCGCATCCTATCCGATTaGAAGTGGCCCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFRILSD*KWPKPS
Trigger: AGATGGTTTGGGCCACTTCCAATCGGATAGGATGCG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCAAGGGAGAACAGGAGTaGACTGCTGACGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALAKGEQE*TADGRD
Trigger: ATCTCTGCCGTCAGCAGTGCACTCCTGTTCTCCCTT...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAAGGGAGAACAGGAGTaGACTGCTGACGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISKGEQE*TADGRD
Trigger: ATCTCTGCCGTCAGCAGTGCACTCCTGTTCTCCCTT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCCGGTGGGAACACTTTaGCCCGAACTTGATTATGAT +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFPVGTL*PELDYD
Trigger: ATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCTTTGTAGGGCAACTCTaGTGCGTGATGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALAFVGQL*CVMGHR
Trigger: TCTGTGGCCCATCACGCAGCAGAGTTGCCCTACAAA...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGTGTAGCGCTTCCGCCTaGCTTTGGGGATATCCGCTG +
Preference number: 4 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKCSASA*LWGYPL
Trigger: CAGCGGATATCCCCAAAGCCAGGCGGAAGCGCTACA...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCTATCCGATTGGAAGTaGCCCAAACCATCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFLSDWK*PKPSAY
Trigger: ATACGCAGATGGTTTGGGCCACTTCCAATCGGATAG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCAGAGCCTGGGTATATaGCTACACAGGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFQSLGI*LHRKNL
Trigger: TAGGTTCTTCCTGTGTAGCCATATACCCAGGCTCTG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATTGTTGCATGCTGTaGAAAATATGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFHCCML*KIWQAV
Trigger: CACAGCCTGCCATATTTTTCACAGCATGCAACAATG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTGCTGACGGCAGAGATTaGTATCATTTTGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISADGRD*YHFEGW
Trigger: CCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGC...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAGCTTCCGCCTGGCTTTaGGGATATCCGCTGAATCTA +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSASAWL*GYPLNL
Trigger: TAGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGC...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACATATTTGCTGCCGGTaGGAACACTTTGCCCCGAAC +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSHICCR*EHFAPN
Trigger: GTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTTGCTATGTGGTAGCATaGACTCTTGTAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCCYVVA*TLVRGV
Trigger: CACTCCTCTTACAAGAGTTCATGCTACCACATAGCA...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTACTTGGAGGACAAGATaGACATGGTACCCCTACTTT +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCTWRTR*TWYPYF
Trigger: AAAGTAGGGGTACCATGTTCATCTTGTCCTCCAAGT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAAGGATAGCCCATTCTaGAGCTCTCCATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISKDSPF*SSPSGS
Trigger: ACTACCAGATGGAGAGCTTCAGAATGGGCTATCCTT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAAAGGATAGCCCATTCTaGAGCTCTCCATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRKDSPF*SSPSGS
Trigger: ACTACCAGATGGAGAGCTTCAGAATGGGCTATCCTT...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAGCTGACGGCAGAGATTaGTATCATTTTGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTADGRD*YHFEGW
Trigger: CCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGC...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGACTTCTCCAATCCAATTaGCCTTTGGGGCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRLLQSN*PLGHSC
Trigger: GCAACTATGCCCCAAAGGGCAATTGGATTGGAGAAG...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATTGCATCCTTCGATACTaGAGAGCCTGGGTATATGGC +
Preference number: 4 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNCILRY*RAWVYG
Trigger: GCCATATACCCAGGCTCTGCAGTATCGAAGGATGCA...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGATATCATTTTGAGGGGTaGAGAAGAAGAGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRYHFEG*RRRGHR
Trigger: TCGGTGGCCTCTTCTTCTCCACCCCTCAAAATGATA...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACACGCATCCTATCCGATTaGAAGTGGCCCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTRILSD*KWPKPS
Trigger: AGATGGTTTGGGCCACTTCCAATCGGATAGGATGCG...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAATGAGTCAGTGGAATTaGGTAGGACGACGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTMSQWN*VGRRYL
Trigger: CAAGTACCGTCGTCCTACTCAATTCCACTGACTCAT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTATGTTTTGGCAAGTATaGATTGCGCATCCTATCCGA +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCMFWQV*IAHPIR
Trigger: TCGGATAGGATGCGCAATTCATACTTGCCAAAACAT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTATCCTTTGTCTCCTGCTaGGAGGCCTCAAGATGTACT +
Preference number: 4 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLSFVSC*EASRCT
Trigger: AGTACATCTTGAGGCCTCTCAGCAGGAGACAAAGGA...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTAGCCTCTGCCGATTTTaGAAGATTTTCATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCSLCRF*KIFIPN
Trigger: GTTTGGGATGAAAATCTTGCAAAATCGGCAGAGGCT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTCACAGCTGTACAATCTaGTCCAGAAATCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCHSCTI*SRNLGI
Trigger: AATGCCAAGATTTCTGGAGCAGATTGTACAGCTGTG...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTATTAAACAGAGTTCCTaGCAAAGAGGGGCTCATGAA +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCIKQSS*QRGAHE
Trigger: TTCATGAGCCCCTCTTTGGCAGGAACTCTGTTTAAT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTCATGGCTTGACCAACTaGAGAATAGAGCGATATCTT +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCHGLTN*RIERYL
Trigger: AAGATATCGCTCTATTCTCCAGTTGGTCAAGCCATG...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTAATCATGACTGTGTGTaGTGTGCACGAAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCNHDCV*CARRIF
Trigger: AAAGATCCTTCGTGCACACCACACACAGTCATGATT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGCGATACTGCAGAGCCTaGGTATATGGCTACACAGGA +
Preference number: 4 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKRYCRA*VYGYTG
Trigger: TCCTGTGTAGCCATATACCCAGGCTCTGCAGTATCG...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCATGCTATGTGGTAGCATaGACTCTTGTAAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSCYVVA*TLVRGV
Trigger: CACTCCTCTTACAAGAGTTCATGCTACCACATAGCA...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACATGAGTCAGTGGAATTaGGTAGGACGACGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYMSQWN*VGRRYL
Trigger: CAAGTACCGTCGTCCTACTCAATTCCACTGACTCAT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTATGTTTTGGCAAGTATaGATTGCGCATCCTATCCGA +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISMFWQV*IAHPIR
Trigger: TCGGATAGGATGCGCAATTCATACTTGCCAAAACAT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACACAGAGAGGATCGATaGTGTGGAATATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSHREDR*CGICMP
Trigger: TGGCATACATATTCCACATCATCGATCCTCTCTGTG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTATATTCTGTGTAAATTaGACTTACGCCAGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFIFCVN*TYASVW
Trigger: CCAAACACTGGCGTAAGTTCAATTTACACAGAATAT...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAAATTCTCCCCCAAACTaGAAGACTGCTAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTNSPPN*KTANRY
Trigger: GTACCTGTTAGCAGTCTTTCAGTTTGGGGGAGAATT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCCCACCGAGTTTACTTTaGTCTGCACAATGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALAPPSLL*SAQCQN
Trigger: ATTTTGGCATTGTGCAGAGCAAAGTAAACTCGGTGG...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAATATTCCATATTTGCTaGCGGTGGGAACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTIFHIC*RWEHFA
Trigger: GGCAAAGTGTTCCCACCGGCAGCAAATATGGAATAT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAGCGATATCTTCCAGTaGGTACAGATAGATTTTGGC +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISSDIFQ*VQIDFG
Trigger: GCCAAAATCTATCTGTACGCACTGGAAGATATCGCT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGATTGGCAAGTATGAATTaGGCATCCTATCCGATTGGA +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRLASMN*ASYPIG
Trigger: TCCAATCGGATAGGATGCGCAATTCATACTTGCCAA...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATGCATACCAAGTAAACTaGACGTCGCCACACAGATCC +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYAYQVN*TSPHRS
Trigger: GGATCTGTGTGGCGACGTGCAGTTTACTTGGTATGC...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTACTTCTCCAATCCAATTaGCCTTTGGGGCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLLLQSN*PLGHSC
Trigger: GCAACTATGCCCCAAAGGGCAATTGGATTGGAGAAG...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGGAGGGCGCCAGTGCCTaGAATATTATTAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKEGASA*NIISCR
Trigger: TCTACAGCTAATAATATTGCAGGCACTGGCGCCCTC...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTTATGATAATCAAGAATaGCGATCATGTCATTCTGCG +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFYDNQE*RSCHSA
Trigger: CGCAGAATGACATGATCGCCATTCTTGATTATCATA...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCGTACAGATAGATTTTaGCCCAAAAATCTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFRTDRF*PKNLSK
Trigger: CTTACTGAGATTTTTGGGCCAAAATCTATCTGTACG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTACTATCCGATTGGAAGTaGCCCAAACCATCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLLSDWK*PKPSAY
Trigger: ATACGCAGATGGTTTGGGCCACTTCCAATCGGATAG...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAATCCAATTGCCCTTTaGGGCATAGTTGCATACCAA +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISNPIAL*GIVAYQ
Trigger: TTGGTATGCAACTATGCCCCAAAGGGCAATTGGATT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCCTCCACATCTCTTTTTaGAATCCTTTGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALALHISF*NPLSPA
Trigger: AGCAGGAGACAAAGGATTCCAAAAAGAGATGTGGAG...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGACTCCACATCTCTTTTTaGAATCCTTTGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRLHISF*NPLSPA
Trigger: AGCAGGAGACAAAGGATTCCAAAAAGAGATGTGGAG...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTTCAATCTCCAGATGGTaGGTTTCTTTACCATTGAAT +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCSISRW*VSLPLN
Trigger: ATTCAATGGTAAAGAAACTCACCATCTGGAGATTGA...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTAAAGGCAGAGTAGTATaGTATCAAAGCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCKGRVV*YQSIWS
Trigger: TGACCAAATGCTTTGATATCATACTACTCTGCCTTT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTTTGTGCTTTCAGAGCTaGTTCAATATCAGTGAAATT +
Preference number: 4 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFLCFQS*FNISEI
Trigger: AATTTCACTGATATTGAAGCAGCTCTGAAAGCACAA...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATCCGGTGGGAACACTTTaGCCCGAACTTGATTATGAT +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYPVGTL*PELDYD
Trigger: ATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGG...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACATATTCCATATTTGCTaGCGGTGGGAACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYIFHIC*RWEHFA
Trigger: GGCAAAGTGTTCCCACCGGCAGCAAATATGGAATAT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCATTGGCAAGTATGAATTaGGCATCCTATCCGATTGGA +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSLASMN*ASYPIG
Trigger: TCCAATCGGATAGGATGCGCAATTCATACTTGCCAA...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACCCTACTTTATATGGTaGTTCTCCAATCCAATTGCC +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSPYFIW*FSNPIA
Trigger: GGCAATTGGATTGGAGAAGCACCATATAAAGTAGGG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACCTACAGGTAAATACTaGTGTGTCTGCTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSPTGKY*CVCFLQ
Trigger: TTGAAGGAAGCAGACACAGCAGTATTTACCTGTAGG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAAGCACCATTGTTGCATaGTGTGAAAAATATGGCAGG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTSTIVA*CEKYGR
Trigger: CCTGCCATATTTTTCACAGCATGCAACAATGGTGCT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTTACAGAAATGGCTTTTaGTGTAGGTCAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISYRNGF*CRSSSH
Trigger: ATGGCTACTTGACCTACAGCAAAAGCCATTTCTGTA...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTTATCATTTTGAGGGGTaGAGAAGAAGAGGCCACCGA +
Preference number: 4 (lower is better)
Translates to: FCLSNKTQDAVICIQAPAYHFEG*RRRGHR
Trigger: TCGGTGGCCTCTTCTTCTCCACCCCTCAAAATGATA...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACACATGGCTTGACCAACTaGAGAATAGAGCGATATCTT +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTHGLTN*RIERYL
Trigger: AAGATATCGCTCTATTCTCCAGTTGGTCAAGCCATG...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACACTTCATCATACCATaGCTTGACCAACTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSHFIIP*LDQLEN
Trigger: ATTCTCCAGTTGGTCAAGCCATGGTATGATGAAGTG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTGCAATCCTGGGGATATaGAAAAGCATAATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISAILGI*KSIIFH
Trigger: GTGAAAGATTATGCTTTTCCATATCCCCAGGATTGC...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR CAA 72 bp AGCTTTATGTATATATTGCACAGCATGGCTTATTACTaGCTCCACCTACAGGTAAATACTGCTGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFMYILHSMAYY*LHLQVNTAVSA
Trigger: AGCAGACACAGCAGTATTTACCTGTAGGTGGAGCAAGTAATAAGCCATGCTGTGCAATATATACATAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCTGCTTCAATATCAGTaGAATTATTGGTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FCLSNKTQDAVICIQAPALLQYQ*NYWLAG
Trigger: CCCCGCCAACCAATAATTTCACTGATATTGAAGCAG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATACTTGGAGGACAAGATaGACATGGTACCCCTACTTT +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYTWRTR*TWYPYF
Trigger: AAAGTAGGGGTACCATGTTCATCTTGTCCTCCAAGT...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAAAATATCTCCAGGGTaGAATTCGTGGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISKISPG*NSWLLN
Trigger: ATTAAGCAACCACGAATTTCACCCTGGAGATATTTT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTACTAAGCGGAAGGCATaGTTTGAGAACTTATATAAG +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISTKRKA*FENLYK
Trigger: CTTATATAAGTTCTCAAATCATGCCTTCCGCTTAGT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCGTAACTAAATTCCCATaGGAAGCAGAAGCTTTATGT +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALAVTKFP*EAEALC
Trigger: ACATAAAGCTTCTGCTTCTCATGGGAATTTAGTTAC...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAACTTCATTGGTTTTCTaGGGGTCTTACTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRTSLVF*GSYFLF
Trigger: AAACAGAAAGTAAGACCCTCAGAAAACCAATGAAGT...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCTCAATCTCCAGATGGTaGGTTTCTTTACCATTGAAT +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALASISRW*VSLPLN
Trigger: ATTCAATGGTAAAGAAACTCACCATCTGGAGATTGA...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTATGGCAGGCTGTGTTaGTACCAGCAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYYGRLC*YQQTFI
Trigger: AATGAAAGTTTGCTGGTATCAACACAGCCTGCCATA...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCAACCTTCTAAGTTTTTaGCTGATCTCCCATAAGTCA +
Preference number: 4 (lower is better)
Translates to: VKNMAGCVDTSKLSFALANLLSF*LISHKS
Trigger: TGACTTATGGGAGATCAGTCAAAAACTTAGAAGGTT...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACAGCGATATCTTCCAGTaGGTACAGATAGATTTTGGC +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYSDIFQ*VQIDFG
Trigger: GCCAAAATCTATCTGTACGCACTGGAAGATATCGCT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGACTTCCTTCTGTAATTTaGACTCTGGAACTAACCATA +
Preference number: 4 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRLPSVI*TLELTI
Trigger: TATGGTTAGTTCCAGAGTGCAAATTACAGAAGGAAG...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATGCAATCCTGGGGATATaGAAAAGCATAATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNAILGI*KSIIFH
Trigger: GTGAAAGATTATGCTTTTCCATATCCCCAGGATTGC...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAAATCCAATTGCCCTTTaGGGCATAGTTGCATACCAA +
Preference number: 4 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLNPIAL*GIVAYQ
Trigger: TTGGTATGCAACTATGCCCCAAAGGGCAATTGGATT...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTAGAACTTATATAAGTTaGCATTATCCTTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCRTYIS*HYPLVD
Trigger: GTCCACCAAAGGATAATGCCAACTTATATAAGTTCT...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAATATATTGCACAGCATaGCTTATTACTTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSIYCTA*LITCST
Trigger: GGTGGAGCAAGTAATAAGCCATGCTGTGCAATATAT...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAAATCATGACTGTGTGTaGTGTGCACGAAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLNHDCV*CARRIF
Trigger: AAAGATCCTTCGTGCACACCACACACAGTCATGATT...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR CAA 72 bp TCAAATATTCTGTGTAAATTGAACTTACGCCAGTGTTaGGTCAACTCTGTGCTAAAGCTGCATGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: SNILCKLNLRQC*VNSVLKLHGTF
Trigger: GAAAGTTCCATGCAGCTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATAAAATATCTCCAGGGTaGAATTCGTGGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNKISPG*NSWLLN
Trigger: ATTAAGCAACCACGAATTTCACCCTGGAGATATTTT...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAACTAAGCGGAAGGCATaGTTTGAGAACTTATATAAG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTTKRKA*FENLYK
Trigger: CTTATATAAGTTCTCAAATCATGCCTTCCGCTTAGT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAGTAACTAAATTCCCATaGGAAGCAGAAGCTTTATGT +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTVTKFP*EAEALC
Trigger: ACATAAAGCTTCTGCTTCTCATGGGAATTTAGTTAC...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATAAAGGCAGAGTAGTATaGTATCAAAGCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNKGRVV*YQSIWS
Trigger: TGACCAAATGCTTTGATATCATACTACTCTGCCTTT...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAAGCACCATTAATCAGTaGAGTGTTAAACCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTSTINQ*SVKPSK
Trigger: CTTAGAAGGTTTAACACTTCACTGATTAATGGTGCT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACCATATATTCCATATTTaGTGCCGGTGGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYHIFHI*CRWEHF
Trigger: AAAGTGTTCCCACCGGCAGCAAATATGGAATATATG...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTAGCCTCTGCCGATTTTaGAAGATTTTCATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: FCLSNKTQDAVICIQAPASLCRF*KIFIPN
Trigger: GTTTGGGATGAAAATCTTGCAAAATCGGCAGAGGCT...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCCCTACTTTATATGGTaGTTCTCCAATCCAATTGCC +
Preference number: 4 (lower is better)
Translates to: FCLSNKTQDAVICIQAPAPYFIW*FSNPIA
Trigger: GGCAATTGGATTGGAGAAGCACCATATAAAGTAGGG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCCTACAGGTAAATACTaGTGTGTCTGCTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: FCLSNKTQDAVICIQAPAPTGKY*CVCFLQ
Trigger: TTGAAGGAAGCAGACACAGCAGTATTTACCTGTAGG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTCACATGTACTTGAAATaGAGTATGTTAAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISHMYLK*SMLNVW
Trigger: CCAGACATTTAACATACTGCATTTCAAGTACATGTG...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACATATGATAATCAAGAATaGCGATCATGTCATTCTGCG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTYDNQE*RSCHSA
Trigger: CGCAGAATGACATGATCGCCATTCTTGATTATCATA...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACACGTACAGATAGATTTTaGCCCAAAAATCTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTRTDRF*PKNLSK
Trigger: CTTACTGAGATTTTTGGGCCAAAATCTATCTGTACG...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGATATATTGCACAGCATaGCTTATTACTTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKIYCTA*LITCST
Trigger: GGTGGAGCAAGTAATAAGCCATGCTGTGCAATATAT...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACACTTCATTGGTTTTCTaGGGGTCTTACTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYTSLVF*GSYFLF
Trigger: AAACAGAAAGTAAGACCCTCAGAAAACCAATGAAGT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR TCA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTAGTTTAGGTGATATTTaGCTTTGGACATTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: FCLSNKTQDAVICIQAPASLGDI*LWTLPS
Trigger: GCTTGGCAATGTCCAAAGTCAAATATCACCTAAACT...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATCATATATTCCATATTTaGTGCCGGTGGGAACACTTT +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYHIFHI*CRWEHF
Trigger: AAAGTGTTCCCACCGGCAGCAAATATGGAATATATG...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACACACATGTACTTGAAATaGAGTATGTTAAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTHMYLK*SMLNVW
Trigger: CCAGACATTTAACATACTGCATTTCAAGTACATGTG...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CCA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGTACCCCTACTTTATATaGTGCTTCTCCAATCCAATT +
Preference number: 4 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKYPYFI*CFSNPI
Trigger: AATTGGATTGGAGAAGCACCATATAAAGTAGGGGTA...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATTGTGCTAAAGCTGCATaGAACTTTCAAATGAATGTT +
Preference number: 4 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNCAKAA*NFQMNV
Trigger: AACATTCATTTGAAAGTTCCATGCAGCTTTAGCACA...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAACATTACTAGGAAAGTaGGTGCCAGAATATATTAAC +
Preference number: 4 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSTLLGK*VPEYIN
Trigger: GTTAATATATTCTGGCACCCACTTTCCTAGTAATGT...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATCAAGCCAATATTCCATaGATAAGCTTCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYQANIP*ISFPFN
Trigger: ATTGAAAGGGAAGCTTATTCATGGAATATTGGCTTG...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR TCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATCACCAGAATAGATACTaGCAGTTCACACTGAATAAA +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYHQNRY*QFTLNK
Trigger: TTTATTCAGTGTGAACTGTCAGTATCTATTCTGGTG...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR GCA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTTGTGCTTTCAGAGCTaGTTCAATATCAGTGAAATT +
Preference number: 4 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYLCFQS*FNISEI
Trigger: AATTTCACTGATATTGAAGCAGCTCTGAAAGCACAA...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATCTTCCTTCTGTAATTTaGACTCTGGAACTAACCATA +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYLPSVI*TLELTI
Trigger: TATGGTTAGTTCCAGAGTGCAAATTACAGAAGGAAG...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR GCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATATCTATGTCAACATTTaGATCCTTCGATACTGCAGA +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYIYVNI*ILRYCR
Trigger: TCTGCAGTATCGAAGGATGCAAATGTTGACATAGAT...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATTACCCCTACTTTATATaGTGCTTCTCCAATCCAATT +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYYPYFI*CFSNPI
Trigger: AATTGGATTGGAGAAGCACCATATAAAGTAGGGGTA...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
3UTR CAA 72 bp AAACTTGTAGTTTTTGTCATGGTTTGGAAAGGACTATaGCCTAAGTGTGTAAACCCTGGTCTTAATCTGATA +
Preference number: 4 (lower is better)
Translates to: KLVVFVMVWKGL*PKCVNPGLNLI
Trigger: TATCAGATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAAAACTACAAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CCA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATAGAACTTATATAAGTTaGCATTATCCTTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYRTYIS*HYPLVD
Trigger: GTCCACCAAAGGATAATGCCAACTTATATAAGTTCT...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS CCA 90 bp CAGGAGTGCACTGCTGACGGCAGAGATTGCTATCATTTTGAGGGGTaGAGAAGAAGAGGCCACCGAGTTTACTTTGCTCTGCACAATGCC +
Preference number: 5 (lower is better)
Translates to: QECTADGRDCYHFEG*RRRGHRVYFALHNA
Trigger: GGCATTGTGCAGAGCAAAGTAAACTCGGTGGCCTCTTCTTCTCCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGCAGTGCACTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS GCA 90 bp TTCACAGAGAAGGGAGAACAGGAGTGCACTGCTGACGGCAGAGATTaGTATCATTTTGAGGGGTGGAGAAGAAGAGGCCACCGAGTTTAC +
Preference number: 5 (lower is better)
Translates to: FTEKGEQECTADGRD*YHFEGWRRRGHRVY
Trigger: GTAAACTCGGTGGCCTCTTCTTCTCCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGCAGTGCACTCCTGTTCTCCCTTCTCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 90 bp TGGCGATCATGTCATTCTGCGAAATGTAGCGCTTCCGCCTGGCTTTaGGGATATCCGCTGAATCTAATTGTGCTTTCAGAGCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: WRSCHSAKCSASAWL*GYPLNLIVLSELLQ
Trigger: TTGAAGCAGCTCTGAAAGCACAATTAGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGCGCTACATTTCGCAGAATGACATGATCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 90 bp CAAGAATGGCGATCATGTCATTCTGCGAAATGTAGCGCTTCCGCCTaGCTTTGGGGATATCCGCTGAATCTAATTGTGCTTTCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: QEWRSCHSAKCSASA*LWGYPLNLIVLSEL
Trigger: CAGCTCTGAAAGCACAATTAGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGCGCTACATTTCGCAGAATGACATGATCGCCATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 90 bp CCGGTGGGAACACTTTGCCCCGAACTTGATTATGATAATCAAGAATaGCGATCATGTCATTCTGCGAAATGTAGCGCTTCCGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: PVGTLCPELDYDNQE*RSCHSAKCSASAWL
Trigger: AAGCCAGGCGGAAGCGCTACATTTCGCAGAATGACATGATCGCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 90 bp CAGGAGTGCACTGCTGACGGCAGAGATTGCTATCATTTTGAGGGGTaGAGAAGAAGAGGCCACCGAGTTTACTTTGCTTTAAAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: QECTADGRDCYHFEG*RRRGHRVYFALKQK
Trigger: TTTCTGCTTTAAAGCAAAGTAAACTCGGTGGCCTCTTCTTCTCCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGCAGTGCACTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523773.1
ENST00000649643.1
CDS-3UTR CAA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTCGCTTCCGCCTGGCTTaGGGGATATCCGCTGAATCT +
Preference number: 5 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISRFRLA*GISAES
Trigger: AGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGCG...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTGCGCATCCTATCCGATaGGAAGTGGCCCAAACCATC +
Preference number: 5 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCAHPIR*EVAQTI
Trigger: GATGGTTTGGGCCACTTCCAATCGGATAGGATGCGC...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTATAGGACATCTGGGGTaGCAATCCTGGGGATATGGA +
Preference number: 5 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFIGHLG*QSWGYG
Trigger: TCCATATCCCCAGGATTGCAACCCCAGATGTCCTAT...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAGCGCATCCTATCCGATaGGAAGTGGCCCAAACCATC +
Preference number: 5 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTAHPIR*EVAQTI
Trigger: GATGGTTTGGGCCACTTCCAATCGGATAGGATGCGC...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCAATCCAATTGCCCTTaGGGGCATAGTTGCATACCA +
Preference number: 5 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFQSNCP*GHSCIP
Trigger: TGGTATGCAACTATGCCCCAAAGGGCAATTGGATTG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAGTAGGACGACGGTACTaGCTTCACAGAGAAGGGAGA +
Preference number: 5 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSVGRRY*LHREGR
Trigger: TCTCCCTTCTCTGTGAAGCAAGTACCGTCGTCCTAC...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCGCTTCCGCCTGGCTTaGGGGATATCCGCTGAATCT +
Preference number: 5 (lower is better)
Translates to: FCLSNKTQDAVICIQAPARFRLA*GISAES
Trigger: AGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGCG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCCATATATTCCATATTaGCTGCCGGTGGGAACACTT +
Preference number: 5 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFPYIPY*LPVGTL
Trigger: AAGTGTTCCCACCGGCAGCAAATATGGAATATATGG...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTATAGGACATCTGGGGTaGCAATCCTGGGGATATGGA +
Preference number: 5 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISIGHLG*QSWGYG
Trigger: TCCATATCCCCAGGATTGCAACCCCAGATGTCCTAT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS CCA 90 bp ATCCTGGGGATATGGAAAAGCATAATCTTTCACTTCATCATACCATaGCTTGACCAACTGGAGAATAGAGCGATATCTTCCAGTGCGTAC +
Preference number: 5 (lower is better)
Translates to: ILGIWKSIIFHFIIP*LDQLENRAISSSAY
Trigger: GTACGCACTGGAAGATATCGCTCTATTCTCCAGTTGGTCAAGCCATGGTATGATGAAGTGAAAGATTATGCTTTTCCATATCCCCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAGTAGGACGACGGTACTaGCTTCACAGAGAAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLVGRRY*LHREGR
Trigger: TCTCCCTTCTCTGTGAAGCAAGTACCGTCGTCCTAC...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAGATGAGTCAGTGGAATaGAGTAGGACGACGGTACTT +
Preference number: 5 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRDESVE*SRTTVL
Trigger: AAGTACCGTCGTCCTACTCAATTCCACTGACTCATC...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTCCATATATTCCATATTaGCTGCCGGTGGGAACACTT +
Preference number: 5 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCPYIPY*LPVGTL
Trigger: AAGTGTTCCCACCGGCAGCAAATATGGAATATATGG...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTCATACCTGTTTTGGCAAGTATGAATaGCGCATCCTATCCGATTGG +
Preference number: 5 (lower is better)
Translates to: HSEALHLVVRRNYTFHTCFGKYE*RILSDW
Trigger: CCAATCGGATAGGATGCGCAATTCATACTTGCCAAA...ACAGGTATGAAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTTCTTTTTGGAATCCTTaGTCTCCTGCTGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISSFWNP*SPAERP
Trigger: AGGCCTCTCAGCAGGAGACAAAGGATTCCAAAAAGA...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS TCA 90 bp ACACAGATTGTCAGTACAAGATCCCCCATAACTTGGAGGACAAGATaGACATGGTACCCCTACTTTATATGGTGCTTCTCCAATCCAATT +
Preference number: 5 (lower is better)
Translates to: TQIVSTRSPITWRTR*TWYPYFIWCFSNPI
Trigger: AATTGGATTGGAGAAGCACCATATAAAGTAGGGGTACCATGTTCATCTTGTCCTCCAAGTTATGGGGGATCTTGTACTGACAATCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS GCA 90 bp CATCCCAAACCATATATTCCATATTTGCTGCCGGTGGGAACACTTTaGCCCGAACTTGATTATGATAATCAAGAATGGCGATCATGTCAT +
Preference number: 5 (lower is better)
Translates to: HPKPYIPYLLPVGTL*PELDYDNQEWRSCH
Trigger: ATGACATGATCGCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATGGAATATATGGTTTGGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS-3UTR CAA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATGATGAGTCAGTGGAATaGAGTAGGACGACGGTACTT +
Preference number: 5 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNDESVE*SRTTVL
Trigger: AAGTACCGTCGTCCTACTCAATTCCACTGACTCATC...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGATCATCATACCATGGCTaGACCAACTGGAGAATAGAG +
Preference number: 5 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRSSYHG*TNWRIE
Trigger: CTCTATTCTCCAGTTGGTCAAGCCATGGTATGATGA...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACCTGGAAAACACAGATaGTCAGTACAAGATCCCCCA +
Preference number: 5 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSPGKHR*SVQDPP
Trigger: TGGGGGATCTTGTACTGACAATCTGTGTTTTCCAGG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACACTTTTGTGAGCTTCTaGAGGGCGGGAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYTFVSF*RAGTMS
Trigger: AGACATGGTTCCCGCCCTCAAGAAGCTCACAAAAGT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAACTTTTGTGAGCTTCTaGAGGGCGGGAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLTFVSF*RAGTMS
Trigger: AGACATGGTTCCCGCCCTCAAGAAGCTCACAAAAGT...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACATCTTTTTGGAATCCTTaGTCTCCTGCTGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTSFWNP*SPAERP
Trigger: AGGCCTCTCAGCAGGAGACAAAGGATTCCAAAAAGA...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCACCTCCACATCTCTTTTaGGAATCCTTTGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSPPHLF*ESFVSC
Trigger: GCAGGAGACAAAGGATTCCAAAAAGAGATGTGGAGG...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS TCA 90 bp TTCCTGGAGGAAAAGGTAAACTTATTTAAACCAGTACAGGTAGTTTaGCGTAACTCCTGGAAAACACAGATTGTCAGTACAAGATCCCCC +
Preference number: 5 (lower is better)
Translates to: FLEEKVNLFKPVQVV*RNSWKTQIVSTRSP
Trigger: GGGGGATCTTGTACTGACAATCTGTGTTTTCCAGGAGTTACGTCAAACTACCTGTACTGGTTTAAATAAGTTTACCTTTTCCTCCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 90 bp TGCAAGATTTTCATCCCAAACCATATATTCCATATTTGCTGCCGGTaGGAACACTTTGCCCCGAACTTGATTATGATAATCAAGAATGGC +
Preference number: 5 (lower is better)
Translates to: CKIFIPNHIFHICCR*EHFAPNLIMIIKNG
Trigger: GCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATGGAATATATGGTTTGGGATGAAAATCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS-3UTR CAA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGCAATCCAATTGCCCTTaGGGGCATAGTTGCATACCA +
Preference number: 5 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKQSNCP*GHSCIP
Trigger: TGGTATGCAACTATGCCCCAAAGGGCAATTGGATTG...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTACCTGGAAAACACAGATaGTCAGTACAAGATCCCCCA +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLPGKHR*SVQDPP
Trigger: TGGGGGATCTTGTACTGACAATCTGTGTTTTCCAGG...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTACCTCCACATCTCTTTTaGGAATCCTTTGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLPPHLF*ESFVSC
Trigger: GCAGGAGACAAAGGATTCCAAAAAGAGATGTGGAGG...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AGGATAGCCCATTCTGAAGCTCTCCATCTGGTAGTTAGGCGCAATTACACTTTTAATTCAGCAACAAAATaGGAACTTAGTGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: RIAHSEALHLVVRRNYTFNSATK*ELSVAI
Trigger: GATGGCTACACTAAGTTCCAATTTTGTTGCTGAATT...AAAAGTGTAATTGCGCCTAACTACCAGATGGAGAGCTTCAGAATGGGCTATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp GTGAAAAATATGGCAGGCTGTGTTGATACCAGCAAACTTTCATTTGCTTTAGCCGCTATCCTAGCACCATaGTTGCATGCTGTGAAAAAT +
Preference number: 5 (lower is better)
Translates to: VKNMAGCVDTSKLSFALAAILAP*LHAVKN
Trigger: ATTTTTCACAGCATGCAACAATGGTGCTAGGATAGC...GGCTAAAGCAAATGAAAGTTTGCTGGTATCAACACAGCCTGCCATATTTTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATGCCACCGAGTTTACTTaGCTCTGCACAATGCCAAAA +
Preference number: 5 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYATEFT*LCTMPK
Trigger: TTTTGGCATTGTGCAGAGCAAAGTAAACTCGGTGGC...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTATCATCATACCATGGCTaGACCAACTGGAGAATAGAG +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLSSYHG*TNWRIE
Trigger: CTCTATTCTCCAGTTGGTCAAGCCATGGTATGATGA...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTTGTGAGCTTCTTGAGGGCGGGAACCATGTCTAATTATCTCTGCATTATTAGAAGCGGAAGGCATGATTaGAGAACTTATATAAGTTGG +
Preference number: 5 (lower is better)
Translates to: FVSFLRAGTMSNYLCIIRSGRHD*RTYISW
Trigger: CCAACTTATATAAGTTCTCAAATCATGCCTTCCGCT...TCTAATAATGCAGAGATAATTAGACATGGTTCCCGCCCTCAAGAAGCTCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACTCAAGCATGGCTTATTACTaGCTCCACCTACAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: NKIMTVCGVHEGSFIQYSSMAYY*LHLQVN
Trigger: ATTTACCTGTAGGTGGAGCAAGTAATAAGCCATGCT...TGAGTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAATATGGCAGGCTGTGTaGATACCAGCAAACTTTCAT +
Preference number: 5 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTIWQAV*IPANFH
Trigger: ATGAAAGTTTGCTGGTATCAACACAGCCTGCCATAT...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACAACTTACGCCAGTGTTaGGTCAACTCTGTGCTAAAG +
Preference number: 5 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYNLRQC*VNSVLK
Trigger: CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp TTTGTCATGGTTTGGAAAGGACTATTGCCTAAGTGTGTAAACCCTGGTCTTAATCATCTATGTCAACATTaGCATCCTTCGATACTGCAG +
Preference number: 5 (lower is better)
Translates to: FVMVWKGLLPKCVNPGLNHLCQH*HPSILQ
Trigger: CTGCAGTATCGAAGGATGCAAATGTTGACATAGATG...ATTAAGACCAGGGTTTACACACTTAGGCAATAGTCCTTTCCAAACCATGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGATATCAGTGAAATTATaGGTTGGCGGGGATGAGTCA +
Preference number: 5 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKISVKL*VGGDES
Trigger: TGACTCATCCCCGCCAACCAATAATTTCACTGATAT...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAATATCAGTGAAATTATaGGTTGGCGGGGATGAGTCA +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLISVKL*VGGDES
Trigger: TGACTCATCCCCGCCAACCAATAATTTCACTGATAT...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAAAGCCTCTGCCGATTTaGCAAGATTTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLKPLPI*QDFHPK
Trigger: TTTGGGATGAAAATCTTGCAAAATCGGCAGAGGCTT...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACAAGCCTCTGCCGATTTaGCAAGATTTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYKPLPI*QDFHPK
Trigger: TTTGGGATGAAAATCTTGCAAAATCGGCAGAGGCTT...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATTTTGGCAAGTATGAATaGCGCATCCTATCCGATTGG +
Preference number: 5 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYFGKYE*RILSDW
Trigger: CCAATCGGATAGGATGCGCAATTCATACTTGCCAAA...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTAGTTGGCATTATCCTTaGGTGGACTCAAATAAGAAA +
Preference number: 5 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISSWHYP*VDSNKK
Trigger: TTTCTTATTTGAGTCCACCAAAGGATAATGCCAACT...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp GTGGTGTGCACGAAGGATCTTTCATACAATACTCAAAGACCCAAGATGATAAGTGAGAACTTATATAAGTaGGCATTATCCTTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: VVCTKDLSYNTQRPKMISENLYK*ALSFGG
Trigger: TCCACCAAAGGATAATGCCAACTTATATAAGTTCTC...ACTTATCATCTTGGGTCTTTGAGTATTGTATGAAAGATCCTTCGTGCACACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAAGCATGGCTTATTACTaGCTCCACCTACAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLSMAYY*LHLQVN
Trigger: ATTTACCTGTAGGTGGAGCAAGTAATAAGCCATGCT...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACACAGAAATCTTGGCATTaGTTAATTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTQKSWH*LILSFP
Trigger: GGGGAAGGAAAGAATTAACAAATGCCAAGATTTCTG...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp CTAAATTCCCATGAGAAGCAGAAGCTTTATGTATATATTGCACAGCATGGCTTAGTTTGGAAAGGACTATaGCCTAAGTGTGTAAACCCT +
Preference number: 5 (lower is better)
Translates to: LNSHEKQKLYVYIAQHGLVWKGL*PKCVNP
Trigger: AGGGTTTACACACTTAGGCAATAGTCCTTTCCAAAC...TAAGCCATGCTGTGCAATATATACATAAAGCTTCTGCTTCTCATGGGAATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp TTCATTGGTTTTCTGAGGGTCTTACTTTCTGTTTTCCAAAGTCACAGCTGTACAGAGAACTTATATAAGTaGGCATTATCCTTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: FIGFLRVLLSVFQSHSCTENLYK*ALSFGG
Trigger: TCCACCAAAGGATAATGCCAACTTATATAAGTTCTC...TGTACAGCTGTGACTTTGGAAAACAGAAAGTAAGACCCTCAGAAAACCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTTCCTTCCTAAACACTTaGGTAGGTAAGAGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FCLSNKTQDAVICIQAPASFLNT*VGKSFH
Trigger: ATGGAAGCTCTTACCTACCAAAGTGTTTAGGAAGGA...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp TTTAACAAAATCATGACTGTGTGTGGTGTGCACGAAGGATCTTTCATACAATACCACTTTGCCCCGAACTaGATTATGATAATCAAGAAT +
Preference number: 5 (lower is better)
Translates to: FNKIMTVCGVHEGSFIQYHFAPN*IMIIKN
Trigger: ATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTG...GTATTGTATGAAAGATCCTTCGTGCACACCACACACAGTCATGATTTTGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp AATATTCTGTGTAAATTGAACTTACGCCAGTGTTTGGTCAACTCTGTGCTAAAGAGTTGGCATTATCCTTaGGTGGACTCAAATAAGAAA +
Preference number: 5 (lower is better)
Translates to: NILCKLNLRQCLVNSVLKSWHYP*VDSNKK
Trigger: TTTCTTATTTGAGTCCACCAAAGGATAATGCCAACT...CTTTAGCACAGAGTTGACCAAACACTGGCGTAAGTTCAATTTACACAGAATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS-3UTR CAA 90 bp CATTTCATGGGTATTATAGAAATGTGTGTTAAGAAGTCCCATCACCTCGTATATAGCGGAAGGCATGATTaGAGAACTTATATAAGTTGG +
Preference number: 5 (lower is better)
Translates to: HFMGIIEMCVKKSHHLVYSGRHD*RTYISW
Trigger: CCAACTTATATAAGTTCTCAAATCATGCCTTCCGCT...ATATACGAGGTGATGGGACTTCTTAACACACATTTCTATAATACCCATGAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260113.7
ENST00000649643.1
CDS-3UTR CAA 90 bp TTCTGTTTGTCAAATAAAACACAAGATGCTGTAATATGTATCCAAGCACCAGCTCACTTTGCCCCGAACTaGATTATGATAATCAAGAAT +
Preference number: 5 (lower is better)
Translates to: FCLSNKTQDAVICIQAPAHFAPN*IMIIKN
Trigger: ATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTG...AGCTGGTGCTTGGATACATATTACAGCATCTTGTGTTTTATTTGACAAACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS GCA 72 bp AAGGGAGAACAGGAGTGCACTGCTGACGGCAGAGATTaGTATCATTTTGAGGGGTGGAGAAGAAGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: KGEQECTADGRD*YHFEGWRRRGH
Trigger: GTGGCCTCTTCTTCTCCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGCAGTGCACTCCTGTTCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 90 bp AGGGAGAACAGGAGTGCACTGCTGACGGCAGAGATTGCTATCATTTaGAGGGGTGGAGAAGAAGAGGCCACCGAGTTTACTTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RENRSALLTAEIAII*RGGEEEATEFTLLC
Trigger: GCAGAGCAAAGTAAACTCGGTGGCCTCTTCTTCTCCACCCCTCAAAATGATAGCAATCTCTGCCGTCAGCAGTGCACTCCTGTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260113.7
CDS GCA 72 bp GACGGTACTTGCTTCACAGAGAAGGGAGAACAGGAGTaGACTGCTGACGGCAGAGATTGCTATCATTTTGAG +
Preference number: 6 (lower is better)
Translates to: DGTCFTEKGEQE*TADGRDCYHFE
Trigger: CTCAAAATGATAGCAATCTCTGCCGTCAGCAGTGCACTCCTGTTCTCCCTTCTCTGTGAAGCAAGTACCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS GCA 72 bp GTGCTTCTCCAATCCAATTGCCCTTTGGGGCATAGTTaGATACCAAGTAAACTGCACGTCGCCACACAGATC +
Preference number: 6 (lower is better)
Translates to: VLLQSNCPLGHS*IPSKLHVATQI
Trigger: GATCTGTGTGGCGACGTGCAGTTTACTTGGTATGCAACTATGCCCCAAAGGGCAATTGGATTGGAGAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 72 bp TGTCATTCTGCGAAATGTAGCGCTTCCGCCTGGCTTTaGGGATATCCGCTGAATCTAATTGTGCTTTCAGAG +
Preference number: 6 (lower is better)
Translates to: CHSAKCSASAWL*GYPLNLIVLSE
Trigger: CTCTGAAAGCACAATTAGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGCGCTACATTTCGCAGAATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 72 bp CGATCATGTCATTCTGCGAAATGTAGCGCTTCCGCCTaGCTTTGGGGATATCCGCTGAATCTAATTGTGCTT +
Preference number: 6 (lower is better)
Translates to: RSCHSAKCSASA*LWGYPLNLIVL
Trigger: AAGCACAATTAGATTCAGCGGATATCCCCAAAGCCAGGCGGAAGCGCTACATTTCGCAGAATGACATGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 72 bp GGCAAGTATGAATTGCGCATCCTATCCGATTGGAAGTaGCCCAAACCATCTGCGTATAATGTGTGCACATGG +
Preference number: 6 (lower is better)
Translates to: GKYELRILSDWK*PKPSAYNVCTW
Trigger: CCATGTGCACACATTATACGCAGATGGTTTGGGCCACTTCCAATCGGATAGGATGCGCAATTCATACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 72 bp GTGAAATTATTGGTTGGCGGGGATGAGTCAGTGGAATaGAGTAGGACGACGGTACTTGCTTCACAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: VKLLVGGDESVE*SRTTVLASQRR
Trigger: CCTTCTCTGTGAAGCAAGTACCGTCGTCCTACTCAATTCCACTGACTCATCCCCGCCAACCAATAATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 90 bp CAAGTAAACTGCACGTCGCCACACAGATCCCCAAACATTCATGTTTaGGCAAGTATGAATTGCGCATCCTATCCGATTGGAAGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: QVNCTSPHRSPNIHV*ASMNCASYPIGSGP
Trigger: TGGGCCACTTCCAATCGGATAGGATGCGCAATTCATACTTGCCAAAACATGAATGTTTGGGGATCTGTGTGGCGACGTGCAGTTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 90 bp TCAATATCAGTGAAATTATTGGTTGGCGGGGATGAGTCAGTGGAATaGAGTAGGACGACGGTACTTGCTTCACAGAGAAGGGAGAACAGG +
Preference number: 6 (lower is better)
Translates to: SISVKLLVGGDESVE*SRTTVLASQRRENR
Trigger: CCTGTTCTCCCTTCTCTGTGAAGCAAGTACCGTCGTCCTACTCAATTCCACTGACTCATCCCCGCCAACCAATAATTTCACTGATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS GCA 72 bp ATTGCCCTTTGGGGCATAGTTGCATACCAAGTAAACTaGACGTCGCCACACAGATCCCCAAACATTCATGTT +
Preference number: 6 (lower is better)
Translates to: IALWGIVAYQVN*TSPHRSPNIHV
Trigger: AACATGAATGTTTGGGGATCTGTGTGGCGACGTGCAGTTTACTTGGTATGCAACTATGCCCCAAAGGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 72 bp TGCACGTCGCCACACAGATCCCCAAACATTCATGTTTaGGCAAGTATGAATTGCGCATCCTATCCGATTGGA +
Preference number: 6 (lower is better)
Translates to: CTSPHRSPNIHV*ASMNCASYPIG
Trigger: TCCAATCGGATAGGATGCGCAATTCATACTTGCCAAAACATGAATGTTTGGGGATCTGTGTGGCGACGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS TCA 72 bp CACACAGATCCCCAAACATTCATGTTTTGGCAAGTATaGATTGCGCATCCTATCCGATTGGAAGTGGCCCAA +
Preference number: 6 (lower is better)
Translates to: HTDPQTFMFWQV*IAHPIRLEVAQ
Trigger: TTGGGCCACTTCCAATCGGATAGGATGCGCAATTCATACTTGCCAAAACATGAATGTTTGGGGATCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS TCA 72 bp GTCAGTACAAGATCCCCCATAACTTGGAGGACAAGATaGACATGGTACCCCTACTTTATATGGTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VSTRSPITWRTR*TWYPYFIWCFS
Trigger: GGAGAAGCACCATATAAAGTAGGGGTACCATGTTCATCTTGTCCTCCAAGTTATGGGGGATCTTGTACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 72 bp TGTGCTTTCAGAGCTGCTTCAATATCAGTGAAATTATaGGTTGGCGGGGATGAGTCAGTGGAATTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: CAFRAASISVKL*VGGDESVELSR
Trigger: CCTACTCAATTCCACTGACTCATCCCCGCCAACCAATAATTTCACTGATATTGAAGCAGCTCTGAAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 90 bp GAATCTAATTGTGCTTTCAGAGCTGCTTCAATATCAGTGAAATTATaGGTTGGCGGGGATGAGTCAGTGGAATTGAGTAGGACGACGGTA +
Preference number: 6 (lower is better)
Translates to: ESNCAFRAASISVKL*VGGDESVELSRTTV
Trigger: TACCGTCGTCCTACTCAATTCCACTGACTCATCCCCGCCAACCAATAATTTCACTGATATTGAAGCAGCTCTGAAAGCACAATTAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS GCA 72 bp CCATATATTCCATATTTGCTGCCGGTGGGAACACTTTaGCCCGAACTTGATTATGATAATCAAGAATGGCGA +
Preference number: 6 (lower is better)
Translates to: PYIPYLLPVGTL*PELDYDNQEWR
Trigger: TCGCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATGGAATATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 72 bp ACACTTTGCCCCGAACTTGATTATGATAATCAAGAATaGCGATCATGTCATTCTGCGAAATGTAGCGCTTCC +
Preference number: 6 (lower is better)
Translates to: TLCPELDYDNQE*RSCHSAKCSAS
Trigger: GGAAGCGCTACATTTCGCAGAATGACATGATCGCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 72 bp CATATTTGCTGCCGGTGGGAACACTTTGCCCCGAACTaGATTATGATAATCAAGAATGGCGATCATGTCATT +
Preference number: 6 (lower is better)
Translates to: HICCRWEHFAPN*IMIIKNGDHVI
Trigger: AATGACATGATCGCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 72 bp TTCATCCCAAACCATATATTCCATATTTGCTGCCGGTaGGAACACTTTGCCCCGAACTTGATTATGATAATC +
Preference number: 6 (lower is better)
Translates to: FIPNHIFHICCR*EHFAPNLIMII
Trigger: GATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATGGAATATATGGTTTGGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CAA 90 bp CATATATTCCATATTTGCTGCCGGTGGGAACACTTTGCCCCGAACTaGATTATGATAATCAAGAATGGCGATCATGTCATTCTGCGAAAT +
Preference number: 6 (lower is better)
Translates to: HIFHICCRWEHFAPN*IMIIKNGDHVILRN
Trigger: ATTTCGCAGAATGACATGATCGCCATTCTTGATTATCATAATCAAGTTCGGGGCAAAGTGTTCCCACCGGCAGCAAATATGGAATATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS TCA 72 bp AATCTAATTGTGCTTTCAGAGCTGCTTCAATATCAGTaGAATTATTGGTTGGCGGGGATGAGTCAGTGGAAT +
Preference number: 6 (lower is better)
Translates to: NLIVLSELLQYQ*NYWLAGMSQWN
Trigger: ATTCCACTGACTCATCCCCGCCAACCAATAATTTCACTGATATTGAAGCAGCTCTGAAAGCACAATTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS CCA 72 bp ATATGGAAAAGCATAATCTTTCACTTCATCATACCATaGCTTGACCAACTGGAGAATAGAGCGATATCTTCC +
Preference number: 6 (lower is better)
Translates to: IWKSIIFHFIIP*LDQLENRAISS
Trigger: GGAAGATATCGCTCTATTCTCCAGTTGGTCAAGCCATGGTATGATGAAGTGAAAGATTATGCTTTTCCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1
CDS TCA 72 bp GAAAAGGTAAACTTATTTAAACCAGTACAGGTAGTTTaGCGTAACTCCTGGAAAACACAGATTGTCAGTACA +
Preference number: 6 (lower is better)
Translates to: EKVNLFKPVQVV*RNSWKTQIVST
Trigger: TGTACTGACAATCTGTGTTTTCCAGGAGTTACGTCAAACTACCTGTACTGGTTTAAATAAGTTTACCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260113.7
ENST00000523773.1
ENST00000649643.1