RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHYKPL (Homo sapiens)

Ensembl gene IDs: ENSG00000175309

Ensembl transcript IDs: ENST00000308158.10, ENST00000323594.8, ENST00000393488.2, ENST00000474052.5, ENST00000476170.2, ENST00000476487.5, ENST00000481436.5, ENST00000481811.5, ENST00000489262.5, ENST00000493197.5, ENST00000494126.6, ENST00000504096.1, ENST00000506001.1, ENST00000506045.1, ENST00000510913.5, ENST00000510991.5, ENST00000511716.1, ENST00000514424.5

Found 760 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTaGGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCC +
Preference number: 1 (lower is better)
Translates to: VLNAGGFKCPRHRLG*GHAGNRVAVANGLA
Trigger: GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR GCA 90 bp GCTGCCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTG +
Preference number: 1 (lower is better)
Translates to: AAPKRVEVLNAGGFK*PRHRLGCGHAGNRV
Trigger: CACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR CCA 90 bp TTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGAC +
Preference number: 1 (lower is better)
Translates to: LKYSTPVASNALATG*VAATQATGWPLPMD
Trigger: GTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR GCA 90 bp ATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTaGTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACGTGCGCCAC +
Preference number: 1 (lower is better)
Translates to: MQVPAVGVEHLVLLM*CLDHERVAVPNVRH
Trigger: GTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR TCA 90 bp TGCGGATGTGCTCTGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: CGCALPLGRSSQQGE*SALPHWAETQRRRL
Trigger: CAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAGAGCACATCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
3UTR GCA 90 bp CAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTGGCAGTGCCCAACGTGCGCCACATT +
Preference number: 1 (lower is better)
Translates to: QVPAVGVEHLVLLMC*LDHERVAVPNVRHI
Trigger: AATGTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CCA 90 bp TACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTTaGACCACGAGAGGGTGGCAGTGCCCAACGTGCGCCACATTGCTG +
Preference number: 1 (lower is better)
Translates to: YRLLVLSTWFCSCAA*TTRGWQCPTCATLL
Trigger: CAGCAATGTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR TCA 90 bp TTTCCCTGGAGTCTGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: FPWSLPLGRSSQQGE*SALPHWAETQRRRL
Trigger: CAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAGACTCCAGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR GCA 90 bp CCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTaGAACAAAGACCCCTCCGGCCTTGCGGATGTGCTCTGCCACTTG +
Preference number: 1 (lower is better)
Translates to: PEVLAYPAKANLDLI*NKDPSGLADVLCHL
Trigger: CAAGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
3UTR GCA 90 bp ATGTTGTCATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTaGTCATGTGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACG +
Preference number: 1 (lower is better)
Translates to: MLSCRYRLLVLSTWF*SCAAWTTRGWQCPT
Trigger: CGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CCA 90 bp TCCACGATGTTGTCATGCAGGTACCGGCTGTTGGTGTTGAGCACCTaGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGGTGGCAGTGC +
Preference number: 1 (lower is better)
Translates to: STMLSCRYRLLVLST*FCSCAAWTTRGWQC
Trigger: GCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CCA 90 bp CCTGGTGTCCCGTGTAGTGGCGAGCCAGCCTCAGGGCCAGGTCATTaGCTTCTGACCTCACTAAGCTCCAGCAATGATCCCAGAATTCAG +
Preference number: 1 (lower is better)
Translates to: PGVPCSGEPASGPGH*LLTSLSSSNDPRIQ
Trigger: CTGAATTCTGGGATCATTGCTGGAGCTTAGTGAGGTCAGAAGCCAATGACCTGGCCCTGAGGCTGGCTCGCCACTACACGGGACACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR TCA 90 bp GCGCATAGTCCACGATGTTGTCATGCAGGTACCGGCTGTTGGTGTTaGGCACCTGGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGGT +
Preference number: 1 (lower is better)
Translates to: AHSPRCCHAGTGCWC*APGSAHVLLGPREG
Trigger: ACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGGACTATGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp TGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTaGCTCCTGCAGATTTGCCTGTTTCTTCCTTGGACTCCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: CPPTLGRDSAKKAAI*LLQICLFLPWTPAE
Trigger: CTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGGCAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR CCA 90 bp CAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTaGGGGCTTAAACTTCAGGATGTTCCTCCCAGGGCCATCAGTGCT +
Preference number: 1 (lower is better)
Translates to: QLCHHLPCIVQAEAH*GLKLQDVPPRAISA
Trigger: AGCACTGATGGCCCTGGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR TCA 90 bp GGACCCACTCCTTCTGGCCATCCAGGTTGCGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCAGGTGGCCGTGATACGCATGATCTA +
Preference number: 1 (lower is better)
Translates to: GPTPSGHPGCGTCRD*CQSGSSGGRDTHDL
Trigger: TAGATCATGCGTATCACGGCCACCTGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp CAGGGACGAAGTCTTTTCCCTGGAGCTGGAAGGCCCAGAAGTGCTTaGCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGA +
Preference number: 1 (lower is better)
Translates to: QGRSLFPGAGRPRSA*LPGQSQPGSHLQQR
Trigger: TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp ATGTCAGGGACGAAGTCTTTTCCCTGGAGCTGGAAGGCCCAGAAGTaGTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACA +
Preference number: 1 (lower is better)
Translates to: MSGTKSFPWSWKAQK*LPTRPKPTWISSAT
Trigger: TGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp TCAGCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTaGATCTTCAAGAGTAAGAAGCAAGGCCCACTCACCTGGAGTACA +
Preference number: 1 (lower is better)
Translates to: SACRGCLLLMVRNPL*IFKSKKQGPLTWST
Trigger: TGTACTCCAGGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR GCA 90 bp ACTTCTCACCTTCTCTTCCATGTCAGTCAGAATGGCATCCAGCTTTaGCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGG +
Preference number: 1 (lower is better)
Translates to: TSHLLFHVSQNGIQL*HHLPCIVQAEAHWG
Trigger: CCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAGAGAAGGTGAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR TCA 90 bp AGAATTCAGGAAATAGAACACACAGAGCTGCTCCGGCAGGGTCTCTaGCAGCCTCTGCGCATAGTCCACGATGTTGTCATGCAGGTACCG +
Preference number: 1 (lower is better)
Translates to: RIQEIEHTELLRQGL*QPLRIVHDVVMQVP
Trigger: CGGTACCTGCATGACAACATCGTGGACTATGCGCAGAGGCTGTCAGAGACCCTGCCGGAGCAGCTCTGTGTGTTCTATTTCCTGAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp TTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTCAGGAT +
Preference number: 1 (lower is better)
Translates to: FHVSQNGIQLCHHLP*IVQAEAHWGLKLQD
Trigger: ATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR GCA 90 bp TTCTCTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTaGCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTC +
Preference number: 1 (lower is better)
Translates to: FSSMSVRMASSFATT*RALSRLKHIGGLNF
Trigger: GAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR CCA 90 bp AGAGAATGGAAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTaGCCCAGGATCAGCCCCAAGGAACAGAGGAGGAATCAGCAAAGA +
Preference number: 1 (lower is better)
Translates to: REWKRSPEERAQREK*PRISPKEQRRNQQR
Trigger: TCTTTGCTGATTCCTCCTCTGTTCCTTGGGGCTGATCCTGGGCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR GCA 90 bp TTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATaGAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: FHPQWTERKLTDLRG*RHLGYSNRPVVRRR
Trigger: CCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR GCA 90 bp AAAAGAGTCTGCAGGAAGAGCTTGTCTCTCCACTCCACAGGTGGTTaGAAAGCAGGAAGCAGATGGGGTAACAAGTCGCTGAAACTTCGG +
Preference number: 1 (lower is better)
Translates to: KRVCRKSLSLHSTGG*KAGSRWGNKSLKLR
Trigger: CCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGAGACAAGCTCTTCCTGCAGACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp TTGCCTGTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTGAATaGCTTTTCCAGTCCATCCTCCACATGGCCACCAGGGTGATGATG +
Preference number: 1 (lower is better)
Translates to: LPVSSLDSCRGLLTE*LFQSILHMATRVMM
Trigger: CATCATCACCCTGGTGGCCATGTGGAGGATGGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR TCA 90 bp AGATTTGCCTGTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTaGATGCCTTTTCCAGTCCATCCTCCACATGGCCACCAGGGTGAT +
Preference number: 1 (lower is better)
Translates to: RFACFFLGLLQRSSN*MPFPVHPPHGHQGD
Trigger: ATCACCCTGGTGGCCATGTGGAGGATGGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR GCA 90 bp TGCAATCTGCCTCCTGCAGATTTGCCTGTTTCTTCCTTGGACTCCTaGAGAGGTCTTCTAACTGAATGCCTTTTCCAGTCCATCCTCCAC +
Preference number: 1 (lower is better)
Translates to: CNLPPADLPVSSLDS*RGLLTECLFQSILH
Trigger: GTGGAGGATGGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGGCAGATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR CCA 90 bp AGCTTGTCTCTCCACTCCACAGGTGGTTGCAAAGCAGGAAGCAGATaGGGTAACAAGTCGCTGAAACTTCGGATTGTTTCTGAAAGCATT +
Preference number: 1 (lower is better)
Translates to: SLSLHSTGGCKAGSR*GNKSLKLRIVSESI
Trigger: AATGCTTTCAGAAACAATCCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGAGACAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 90 bp CGGAGAGTGGTAACTGTCAATTACTGCTGGGACAGAGTAAGACAATaGAGCAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTG +
Preference number: 1 (lower is better)
Translates to: RRVVTVNYCWDRVRQ*SKEIALDLATWKSL
Trigger: CAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCACTCTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR GCA 90 bp AGCAAGATGACAGACCACTTCCGGAGAGTGGTAACTGTCAATTACTaGTGGGACAGAGTAAGACAATGCAGCAAAGAGATTGCTTTGGAT +
Preference number: 1 (lower is better)
Translates to: SKMTDHFRRVVTVNY*WDRVRQCSKEIALD
Trigger: ATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCACTCTCCGGAAGTGGTCTGTCATCTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR GCA 90 bp TGTCAATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTaGTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAA +
Preference number: 1 (lower is better)
Translates to: CQLLLGQSKTMQQRD*FGFGNMEVPGIHTE
Trigger: TTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CCA 90 bp AAGATGACAGACCACTTCCGGAGAGTGGTAACTGTCAATTACTGCTaGGACAGAGTAAGACAATGCAGCAAAGAGATTGCTTTGGATTTG +
Preference number: 1 (lower is better)
Translates to: KMTDHFRRVVTVNYC*DRVRQCSKEIALDL
Trigger: CAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCACTCTCCGGAAGTGGTCTGTCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CCA 90 bp AGAGTAAGACAATGCAGCAAAGAGATTGCTTTGGATTTGGCAACATaGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGA +
Preference number: 1 (lower is better)
Translates to: RVRQCSKEIALDLAT*KSLESTQNKAGGIR
Trigger: TCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CCA 90 bp TTAATGGGTGTGCATGTCAGGATTTTCTTTAGAAATACACTGGTCTaGTCTAATTTATTTAAGCAGGAGCACTTTAAAGTATCCCACCCT +
Preference number: 1 (lower is better)
Translates to: LMGVHVRIFFRNTLV*SNLFKQEHFKVSHP
Trigger: AGGGTGGGATACTTTAAAGTGCTCCTGCTTAAATAAATTAGACCAGACCAGTGTATTTCTAAAGAAAATCCTGACATGCACACCCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
3UTR CAA 90 bp AGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGC +
Preference number: 2 (lower is better)
Translates to: STQRRWLQMPSPQAG*RPRRQQGGRCQWTC
Trigger: GCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR CAA 90 bp GTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCAGTGCCCAACGTGCGCCACATTGCT +
Preference number: 2 (lower is better)
Translates to: VPAVGVEHLVLLMCC*DHERVAVPNVRHIA
Trigger: AGCAATGTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CCA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTACATGTACTGCCCTTaGGCCCGGACAATCTTAACA +
Preference number: 2 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRYMYCP*ARTILT
Trigger: TGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTA...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR TCA 90 bp GTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACCGTGCGCCACATTGCTaGTGCAATCGATGTATTCTG +
Preference number: 2 (lower is better)
Translates to: VLNAGGFKCPRHRLGCGHRAPHC*CNRCIL
Trigger: CAGAATACATCGATTGCATCAGCAATGTGGCGCACG...GTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CCA 90 bp GTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGGGGATGCAGACATCTaGGTTATTCCAACAGACCAG +
Preference number: 2 (lower is better)
Translates to: VLNAGGFKCPRHRLGCGHGDADI*VIPTDQ
Trigger: CTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCC...GTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR TCA 90 bp AAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: KCLPTRPKPTWISSATKTSQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...GGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
3UTR-3UTR CCA 90 bp TGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACTGGACCACGAGAGGGTaGCAGTGCCCAACGTGCGCC +
Preference number: 2 (lower is better)
Translates to: CGLIFDQIHTNEEPNTPDWTTRG*QCPTCA
Trigger: GGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCA...GTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CCA 90 bp AAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCGGCATAGGCCATAGCTaGGTTGGGGTGGTCCTCCCG +
Preference number: 2 (lower is better)
Translates to: KCLPTRPKPTWISSATKTGIGHS*VGVVLP
Trigger: CGGGAGGACCACCCCAACCCAGCTATGGCCTATGCC...GGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CCA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCCACAGCGCAGGACACTaGGCTGCCCCCAAACGTGTT +
Preference number: 2 (lower is better)
Translates to: YTGGMILELLLLQDIQDGHSAGH*AAPKRV
Trigger: AACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTG...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR-3UTR CCA 90 bp AGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAGCAGTGCATACCACGTaGACCCACTCCTTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SFATTCRALSRLKHIGGLAVHTT*THSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGC...TAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR TCA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACACTCCGGCAGGGTCTCTaGCAGCCTCTGCGCATAGTC +
Preference number: 2 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTLRQGL*QPLRIV
Trigger: GACTATGCGCAGAGGCTGTCAGAGACCCTGCCGGAG...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR TCA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACAAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 2 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTSQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR GCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGCAGGGGGAATGATCTaGCCTCCCACACTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPAGGMI*PPTLGR
Trigger: TCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CCA 90 bp GCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCCTCATTCCAACAGACCAGTaGTTAGGAGGAGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: ACLPGQSQPGSHLQQRPLIPTDQ*LGGGGG
Trigger: CCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAAT...GAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CAA 90 bp TCAGGGACGAAGTCTTTTCCCTGGAGCTGGAAGGCCCAGAAGTGCTaGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAG +
Preference number: 2 (lower is better)
Translates to: SGTKSFPWSWKAQKC*PTRPKPTWISSATK
Trigger: CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR TCA 90 bp CTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCATGTATTTGGATGAGATaGGTTTCTTCTGGAGTACAC +
Preference number: 2 (lower is better)
Translates to: LNAGGFKCPRHRLGCGHACIWMR*VSSGVH
Trigger: GTGTACTCCAGAAGAAACTCATCTCATCCAAATACA...TGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR TCA 90 bp TGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACGTGCGCCACATTGCTGATGGGGTAACAAGTCGCTaGAACTTCGGATTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: CCLDHERVAVPNVRHIADGVTSR*NFGLFL
Trigger: CAGAAACAATCCGAAGTTTCAGCGACTTGTTACCCC...ATCAGCAATGTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR GCA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGACTGACTTGAGGGGATaGAGACATCTGGGTTATTCC +
Preference number: 2 (lower is better)
Translates to: PEELHQEAAYTGGMILELTDLRG*RHLGYS
Trigger: GGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGT...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR GCA 90 bp GAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTTGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: EAAYTGGMILELLLLQDICHHLP*IVQAEA
Trigger: TGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCA...AATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR-3UTR CCA 90 bp GGCTGGCTTAGGGCTGGAGCCTCAGCGTTTCACAACTTCTCACCTTCTCTTCCAATTCCAACAGACCAGTaGTTAGGAGGAGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GWLRAGASAFHNFSPSLPIPTDQ*LGGGGG
Trigger: CCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAAT...TGGAAGAGAAGGTGAGAAGTTGTGAAACGCTGAGGCTCCAGCCCTAAGCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CCA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCAGTACTCAACGCCGGTaGCTTCAAATGCCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: YTGGMILELLLLQDIQDGSTQRR*LQMPSP
Trigger: TGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR-3UTR TCA 90 bp GCCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTAGAAAGGAAATTGACTaGCTTGAGGGGATGCAGACA +
Preference number: 2 (lower is better)
Translates to: ARGAASGSCLHWWHDPGARKEID*LEGMQT
Trigger: TGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCT...AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR TCA 90 bp GCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCTGCCCCCAAACGTGTTaGAGTACTCAACGCCGGTGG +
Preference number: 2 (lower is better)
Translates to: ASSLIRSTPMKSPTPLTSCPQTC*STQRRW
Trigger: CCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCA...GGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR-3UTR CCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGTTAGGAGGAGGGGGTaGGTAGCATTATGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLVRRRG*VALWPR
Trigger: CCGAGGCCATAATGCTACCCACCCCCTCCTCCTAAC...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CCA 90 bp AGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACGGGGATGCAGACATCTaGGTTATTCCAACAGACCAG +
Preference number: 2 (lower is better)
Translates to: RMASSFATTCRALSRLKHGDADI*VIPTDQ
Trigger: CTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCC...GTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR CCA 90 bp TCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGTCTGCCCTCCCACACTaGGCAGAGACTCAGCGAAGA +
Preference number: 2 (lower is better)
Translates to: SSLIRSTPMKSPTPLTSPSALPH*AETQRR
Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA...CGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CCA 90 bp AGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCTCTGCCCTCCCACACTaGGCAGAGACTCAGCGAAGA +
Preference number: 2 (lower is better)
Translates to: SLFSCWCPCGLIFDQIHTSALPH*AETQRR
Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA...GGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR TCA 90 bp CACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTCAGGCTGCAATCTGTTGTTaGGTTGGGCAGTGCATACCA +
Preference number: 2 (lower is better)
Translates to: HHLPCIVQAEAHWGLKLQAAICC*VGQCIP
Trigger: TGGTATGCACTGCCCAACTCAACAACAGATTGCAGC...CTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR GCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGCTGCATCAGGAAGCTaGCTACACTGGTGGCATGAT +
Preference number: 2 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPAASGS*LHWWHD
Trigger: ATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CCA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTCAAGGCCCACTCACCTaGAGTACACTTAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGQGPLT*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGGTGAGTGGGCCTTG...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR-3UTR CCA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACAAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTSCLHW*HDPGAA
Trigger: AGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR CAA 90 bp ATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATaGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTCAGGATGTTC +
Preference number: 2 (lower is better)
Translates to: MSVRMASSFATTCRA*SRLKHIGGLNFRMF
Trigger: GAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR-3UTR TCA 90 bp GCAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGACTCCTCCACCACCACTaGGGAAGCACCAGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: AKRLLWIWQHGSPWNPHRLLHHH*GSTSSL
Trigger: AAGGGAGCTGGTGCTTCCTCAGTGGTGGTGGAGGAG...TCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR-3UTR GCA 90 bp GAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTTCCCAGGGCCATCAGTaGTCAGCAAAACGTAGTTCT +
Preference number: 2 (lower is better)
Translates to: EAAYTGGMILELLLLQDISQGHQ*SAKRSS
Trigger: AGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGA...AATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR-3UTR GCA 90 bp TTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCCTCCGGGTCTTCTAACTGAATaGCTTTTCCAGTCCATCCTC +
Preference number: 2 (lower is better)
Translates to: LPTRPKPTWISSATKTPPGLLTE*LFQSIL
Trigger: GAGGATGGACTGGAAAAGGCATTCAGTTAGAAGACC...CGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR-3UTR CCA 90 bp CATCAGTGCTCAGCAAAACGTAGTTCTCCTTCAGCCTTGATACCAAGTAGGCAGGTTAGGAGGAGGGGGTaGGTAGCATTATGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: HQCSAKRSSPSALIPSRQVRRRG*VALWPR
Trigger: CCGAGGCCATAATGCTACCCACCCCCTCCTCCTAAC...CTGCCTACTTGGTATCAAGGCTGAAGGAGAACTACGTTTTGCTGAGCACTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR GCA 90 bp TCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGACGCTCAGCGAAGAAGGCTaGAATCTGTTGTTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: SLIRSTPMKSPTPLTSPTLSEEG*NLLLSW
Trigger: CCAACTCAACAACAGATTGCAGCCTTCTTCGCTGAG...CGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR GCA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAATCTTCCTTGGACTCCTaGAGAGGTCTTCTAACTGAA +
Preference number: 2 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQSSLDS*RGLLTE
Trigger: TTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGA...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR-3UTR GCA 90 bp GAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACTGCCTCCTGCAGATTTaGCTGTTTCTTCCTTGGACT +
Preference number: 2 (lower is better)
Translates to: EVLAYPAKANLDLICNKDCLLQI*LFLPWT
Trigger: AGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGGCA...GTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR-3UTR CCA 90 bp AATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGGAGATGAGTTTCTTCTaGAGTACACTTAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: NDLPSHTGQRLSEEGCNLEMSFF*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGAAGAAACTCATCTC...CAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR CAA 90 bp GAAGAAGGCTGCAATCTGCCTCCTGCAGATTTGCCTGTTTCTTCCTaGGACTCCTGCAGAGGTCTTCTAACTGAATGCCTTTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: EEGCNLPPADLPVSS*DSCRGLLTECLFQS
Trigger: GGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGGCAGATTGCAGCCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR-3UTR CCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATATTCCAACAGACCAGTaGTTAGGAGGAGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYIPTDQ*LGGGGG
Trigger: CCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAAT...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTTCTCCACTCCACAGGTaGTTGCAAAGCAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVSPLHR*LQSRKQ
Trigger: CTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGA...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CCA 90 bp CTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGAATCTGTTGTTGAGTTaGGCAGTGCATACCACGTGG +
Preference number: 2 (lower is better)
Translates to: LVASSLIRSTPMKSPTPLNLLLS*AVHTTW
Trigger: CCACGTGGTATGCACTGCCCAACTCAACAACAGATT...CAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR GCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATCACTCCACAGGTGGTTaGAAAGCAGGAAGCAGATGG +
Preference number: 2 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYHSTGG*KAGSRW
Trigger: CCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTG...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CCA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTGAGATGAGTTTCTTCTaGAGTACACTTAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGEMSFF*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGAAGAAACTCATCTC...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR TCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGTGTATTTGGATGAGATaGGTTTCTTCTTTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLCIWMR*VSSLGR
Trigger: CCTTCCCAAAGAAGAAACTCATCTCATCCAAATACA...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR-3UTR CCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATCCATTCCACCCCCAGTaGACAGAAAGGAAATTGACT +
Preference number: 2 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYPFHPQ*TERKLT
Trigger: AGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGG...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR CAA 90 bp TGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTGCTTTGGATTaGGCAACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CWDRVRQCSKEIALD*ATWKSLESTQNKAG
Trigger: ACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR-3UTR GCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTAAGGAACCCGCTGTaGATCTTCAAGAGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVVRNPL*IFKSKK
Trigger: CTTCTTACTCTTGAAGATGCACAGCGGGTTCCTTAC...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR-3UTR CCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATGAGATGAGTTTCTTCTaGAGTACACTTAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYEMSFF*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGAAGAAACTCATCTC...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR TCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATATGTATTTGGATGAGATaGGTTTCTTCTGGAGTACAC +
Preference number: 2 (lower is better)
Translates to: PLKADFICKREVRLAFSICIWMR*VSSGVH
Trigger: GTGTACTCCAGAAGAAACTCATCTCATCCAAATACA...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
3UTR CAA 90 bp AATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTGCTTaGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAATAAA +
Preference number: 2 (lower is better)
Translates to: NYCWDRVRQCSKEIA*DLATWKSLESTQNK
Trigger: TTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CCA 72 bp TCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTG +
Preference number: 3 (lower is better)
Translates to: STPVASNALATG*VAATQATGWPL
Trigger: CAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR CCA 72 bp GCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTaGCCGTTGCCAATGGACTTGCCCATGGTGACGATG +
Preference number: 3 (lower is better)
Translates to: ATGWVAATQATG*PLPMDLPMVTM
Trigger: CATCGTCACCATGGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR GCA 72 bp AAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGC +
Preference number: 3 (lower is better)
Translates to: KRVEVLNAGGFK*PRHRLGCGHAG
Trigger: GCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR TCA 72 bp AGTCTGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGGGCAGAGACTCAGCGA +
Preference number: 3 (lower is better)
Translates to: SLPLGRSSQQGE*SALPHWAETQR
Trigger: TCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR GCA 72 bp GCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTGGCAGTGCCCAACGTG +
Preference number: 3 (lower is better)
Translates to: AVGVEHLVLLMC*LDHERVAVPNV
Trigger: CACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 72 bp TGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTaGTCATGTGCTGCTTGGACCACGAGAGGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: CRYRLLVLSTWF*SCAAWTTRGWQ
Trigger: CTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 72 bp CTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTaGAACAAAGACCCCTCCGGCCTTGCGGATGTGCTC +
Preference number: 3 (lower is better)
Translates to: LAYPAKANLDLI*NKDPSGLADVL
Trigger: GAGCACATCCGCAAGGCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
3UTR CCA 72 bp CCGTGTAGTGGCGAGCCAGCCTCAGGGCCAGGTCATTaGCTTCTGACCTCACTAAGCTCCAGCAATGATCCC +
Preference number: 3 (lower is better)
Translates to: PCSGEPASGPGH*LLTSLSSSNDP
Trigger: GGGATCATTGCTGGAGCTTAGTGAGGTCAGAAGCCAATGACCTGGCCCTGAGGCTGGCTCGCCACTACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CCA 72 bp GCTGCCCGAGGAGCTGCATCAGGAAGCTGCCTACACTaGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: AARGAASGSCLH*WHDPGAAPSPR
Trigger: TCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR-3UTR CAA 90 bp AGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCTCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: SLFSCWCPCGLIFDQIHTSPQAG*RPRRQQ
Trigger: CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGA...GGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR TCA 72 bp GCTGGTGGCATAAGAATGCCCCTCCTCCACCACCACTaGGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: AGGIRMPLLHHH*GSTSSLLFPEA
Trigger: AGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGTGGTGGTGGAGGAGGGGCATTCTTATGCCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CCA 72 bp GCCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCTCCTTCTCCAAGACAT +
Preference number: 3 (lower is better)
Translates to: ARGAASGSCLHW*HDPGAAPSPRH
Trigger: ATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR CCA 72 bp CACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTaGGGGCTTAAACTTCAGGATGTTCCTCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: HHLPCIVQAEAH*GLKLQDVPPRA
Trigger: GGCCCTGGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR-3UTR CAA 90 bp AGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAAGACCCCTCCGGCCTaGCGGATGTGCTCTGCCACT +
Preference number: 3 (lower is better)
Translates to: SLFSCWCPCGLIFDQIHTKTPPA*RMCSAT
Trigger: AGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTT...GGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CAA 90 bp TCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGCCTCCTTGCCTGTTTCTTCCTaGGACTCCTGCAGAGGTCTT +
Preference number: 3 (lower is better)
Translates to: SALPHWAETQRRRLQSASLPVSS*DSCRGL
Trigger: AAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAA...GGAGGCAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR TCA 72 bp CGAGAGGGTGGCAGTGCCCAACGTGCGCCACATTGCTaGTGCAATCGATGTATTCTGCCCCCTGTTCATCGT +
Preference number: 3 (lower is better)
Translates to: REGGSAQRAPHC*CNRCILPPVHR
Trigger: ACGATGAACAGGGGGCAGAATACATCGATTGCATCAGCAATGTGGCGCACGTTGGGCACTGCCACCCTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR TCA 72 bp CCTTCTGGCCATCCAGGTTGCGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCAGGTGGCCGTGATACG +
Preference number: 3 (lower is better)
Translates to: PSGHPGCGTCRD*CQSGSSGGRDT
Trigger: CGTATCACGGCCACCTGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 72 bp ATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTaGCGTGCATTGTCCAGGCTGAAGCACATTGGGGGC +
Preference number: 3 (lower is better)
Translates to: MSVRMASSFATT*RALSRLKHIGG
Trigger: GCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR CCA 72 bp TTGTCATGCAGGTACCGGCTGTTGGTGTTGAGCACCTaGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGG +
Preference number: 3 (lower is better)
Translates to: LSCRYRLLVLST*FCSCAAWTTRG
Trigger: CCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CAA 90 bp AAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCGATGTGCTCTGCCACTaGGGAGAAGTAGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: KCLPTRPKPTWISSATKTDVLCH*GEVASR
Trigger: CCTGCTGGCTACTTCTCCCAAGTGGCAGAGCACATC...GGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
3UTR-3UTR CAA 90 bp TGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACGCAACAGGGTGGCCGTaGCCAATGGACTTGCCCATG +
Preference number: 3 (lower is better)
Translates to: CGLIFDQIHTNEEPNTPDATGWP*PMDLPM
Trigger: CATGGGCAAGTCCATTGGCAACGGCCACCCTGTTGC...GTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR TCA 72 bp CCACGATGTTGTCATGCAGGTACCGGCTGTTGGTGTTaGGCACCTGGTTCTGCTCATGTGCTGCTTGGACCA +
Preference number: 3 (lower is better)
Translates to: PRCCHAGTGCWC*APGSAHVLLGP
Trigger: TGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR GCA 72 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTaGATCTTCAAGAGTAAGAAGCAAGGCCCACTCACC +
Preference number: 3 (lower is better)
Translates to: RGCLLLMVRNPL*IFKSKKQGPLT
Trigger: GGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR CCA 72 bp TGCAATCTGTTGTTGAGTTGGGCAGTGCATACCACGTaGACCCACTCCTTCTGGCCATCCAGGTTGCGGAAC +
Preference number: 3 (lower is better)
Translates to: CNLLLSWAVHTT*THSFWPSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR CAA 90 bp TCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGCTGCCCCCAAACGTGTaGAAGTACTCAACGCCGGTG +
Preference number: 3 (lower is better)
Translates to: SSLIRSTPMKSPTPLTSPLPPNV*KYSTPV
Trigger: CACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAG...CGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR GCA 72 bp AGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCACATTGGGGGCTTAAA +
Preference number: 3 (lower is better)
Translates to: SQNGIQLCHHLP*IVQAEAHWGLK
Trigger: TTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR GCA 72 bp CTTCTCTTCCATGTCAGTCAGAATGGCATCCAGCTTTaGCACCACCTGCCGTGCATTGTCCAGGCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: LLFHVSQNGIQL*HHLPCIVQAEA
Trigger: TGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
3UTR CCA 72 bp AAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTaGCCCAGGATCAGCCCCAAGGAACAGAGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: KRSPEERAQREK*PRISPKEQRRN
Trigger: ATTCCTCCTCTGTTCCTTGGGGCTGATCCTGGGCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR-3UTR CAA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACACCGTTGCCAATGGACTaGCCCATGGTGACGATGTCA +
Preference number: 3 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTPLPMD*PMVTMS
Trigger: TGACATCGTCACCATGGGCAAGTCCATTGGCAACGG...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR GCA 72 bp TGGCTAGAGAAGCTGATAGAAAACAGGAGAGCACAGTaGCCGGGAAGCAAGATGACAGACCACTTCCGGAGA +
Preference number: 3 (lower is better)
Translates to: WLEKLIENRRAQ*PGSKMTDHFRR
Trigger: TCTCCGGAAGTGGTCTGTCATCTTGCTTCCCGGGCACTGTGCTCTCCTGTTTTCTATCAGCTTCTCTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR GCA 72 bp TCGATGTATTCTGCCCCCTGTTCATCGTACATGTACTaGCCTTGGGCCCGGACAATCTTAACAGGATCCTCG +
Preference number: 3 (lower is better)
Translates to: SMYSAPCSSYMY*PWARTILTGSS
Trigger: CGAGGATCCTGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTACGATGAACAGGGGGCAGAATACATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CAA 90 bp CCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAACCAACGTGCGCCACATaGCTGATGCAATCGATGTAT +
Preference number: 3 (lower is better)
Translates to: PEVLAYPAKANLDLICNKPTCAT*LMQSMY
Trigger: ATACATCGATTGCATCAGCAATGTGGCGCACGTTGG...TTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CAA 90 bp AGTTCTCCTTCAGCCTTGATACCAAGTAGGCAGCCTCTTCAGTTGCTGGTGTCCGGCTGCAATCTGTTGTaGAGTTGGGCAGTGCATACC +
Preference number: 3 (lower is better)
Translates to: SSPSALIPSRQPLQLLVSGCNLL*SWAVHT
Trigger: GGTATGCACTGCCCAACTCAACAACAGATTGCAGCC...GGACACCAGCAACTGAAGAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR CAA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 3 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CAA 90 bp CCAAGAGAATGGAAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTGGCCCGAGATTGCTTTGGATTaGGCAACATGGAAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PREWKRSPEERAQREKWPEIALD*ATWKSL
Trigger: CAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTC...GGGCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCATTCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR-3UTR CAA 90 bp TCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTTCAGAAGGCTGCAATCTGTaGTTGAGTTGGGCAGTGCAT +
Preference number: 3 (lower is better)
Translates to: SGCSSQGHQCSAKRSSPSEGCNL*LSWAVH
Trigger: ATGCACTGCCCAACTCAACAACAGATTGCAGCCTTC...TGAAGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR CCA 72 bp TATTCTGCCCCCTGTTCATCGTACATGTACTGCCCTTaGGCCCGGACAATCTTAACAGGATCCTCGGGAAAA +
Preference number: 3 (lower is better)
Translates to: YSAPCSSYMYCP*ARTILTGSSGK
Trigger: TTTTCCCGAGGATCCTGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTACGATGAACAGGGGGCAGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CAA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACAAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 3 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
3UTR-3UTR CAA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGTACATGTACTGCCCTaGGGCCCGGACAATCTTAAC +
Preference number: 3 (lower is better)
Translates to: PLKADFICKREVRLAFSIVHVLP*GPDNLN
Trigger: GTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTAC...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR TCA 72 bp CCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTaGCTTGAGGGGATGCAGACATCTGGGTTATTCCAA +
Preference number: 3 (lower is better)
Translates to: PIPPPVDRKEID*LEGMQTSGLFQ
Trigger: TTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR TCA 72 bp TGTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTaGATGCCTTTTCCAGTCCATCCTCCACATGGCCAC +
Preference number: 3 (lower is better)
Translates to: CFFLGLLQRSSN*MPFPVHPPHGH
Trigger: GTGGCCATGTGGAGGATGGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR GCA 72 bp CCTCCTGCAGATTTGCCTGTTTCTTCCTTGGACTCCTaGAGAGGTCTTCTAACTGAATGCCTTTTCCAGTCC +
Preference number: 3 (lower is better)
Translates to: PPADLPVSSLDS*RGLLTECLFQS
Trigger: GGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR CCA 72 bp CTCCACTCCACAGGTGGTTGCAAAGCAGGAAGCAGATaGGGTAACAAGTCGCTGAAACTTCGGATTGTTTCT +
Preference number: 3 (lower is better)
Translates to: LHSTGGCKAGSR*GNKSLKLRIVS
Trigger: AGAAACAATCCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTCAATCTGTTGTTGAGTaGGGCAGTGCATACCACGTG +
Preference number: 3 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVQSVVE*GSAYHV
Trigger: CACGTGGTATGCACTGCCCAACTCAACAACAGATTG...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
3UTR-3UTR CAA 90 bp GTGGTAACTGTCAATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTCAGAGGCTCCAGCTCTaGACATGGCAAATGTCTGGG +
Preference number: 3 (lower is better)
Translates to: VVTVNYCWDRVRQCSKEIQRLQL*TWQMSG
Trigger: CCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTG...AATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR-3UTR CAA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 3 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
3UTR CCA 72 bp GACCACTTCCGGAGAGTGGTAACTGTCAATTACTGCTaGGACAGAGTAAGACAATGCAGCAAAGAGATTGCT +
Preference number: 3 (lower is better)
Translates to: DHFRRVVTVNYC*DRVRQCSKEIA
Trigger: AGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCACTCTCCGGAAGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR GCA 72 bp ACAGACCACTTCCGGAGAGTGGTAACTGTCAATTACTaGTGGGACAGAGTAAGACAATGCAGCAAAGAGATT +
Preference number: 3 (lower is better)
Translates to: TDHFRRVVTVNY*WDRVRQCSKEI
Trigger: AATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCACTCTCCGGAAGTGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CCA 72 bp CAATGCAGCAAAGAGATTGCTTTGGATTTGGCAACATaGAAGTCCCTGGAATCCACACAGAATAAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: QCSKEIALDLAT*KSLESTQNKAG
Trigger: ACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp GCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAGCTGGTCTGCGGCCATaGTGGGTGGCCGTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: ALATGWVAATQATGWPLPAGLRP*WVAVSR
Trigger: CCGACTGACGGCCACCCACCATGGCCGCAGACCAGC...TGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp AGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCTCCGGCCCGTGGTCGTaGCTTGGCAGTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLGCGHAGNRVAVANGLASGPWS*LGSPAQ
Trigger: CTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGA...GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp AATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGTCGGCCTTCGGGCGCTaGTCTGCGGCCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NALATGWVAATQATGWPLSAFGR*SAAMVG
Trigger: ACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGA...CAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HRLGCGHAGNRVAVANGLALATG*VAATQA
Trigger: TGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC...AAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
3UTR CAA 72 bp CGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RRWLQMPSPQAG*RPRRQQGGRCQ
Trigger: TTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRAGGFK*PRHRLG
Trigger: ACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGC...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAGTTAGGAGGAGGGGGTaGGTAGCATTATGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALATGWVAATQATGWPLPVRRRG*VALWPR
Trigger: CCGAGGCCATAATGCTACCCACCCCCTCCTCCTAAC...TGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp GCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCATGGACTTGCCCATGGTaGCGATGTCAGGGACGAAGT +
Preference number: 4 (lower is better)
Translates to: ALATGWVAATQATGWPLPWTCPW*RCQGRS
Trigger: ACTTCGTCCCTGACATCGTCACCATGGGCAAGTCCA...TGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCGAAGCGCCCGCGTTaGGGTGGTTCATTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: NALATGWVAATQATGWPLPKRPR*GGSFLR
Trigger: GCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGG...CAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp TGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGCTTCGGGCGCTGGTCTaGGGCCATGGTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CHLGEVASRGNDLPSHTGLRALV*GHGGWP
Trigger: CGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAG...CCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp TCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGGCAGGGGGAATGATCTaGCCTCCCACACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SNALATGWVAATQATGWPAGGMI*PPTLGR
Trigger: TCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGC...CGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LNAGGFKCPRHRLGCGHAAGGFK*PRHRLG
Trigger: ACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGC...TGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCCACAGCGCAGGACACTaGGCTGCCCCCAAACGTGTT +
Preference number: 4 (lower is better)
Translates to: GWVAATQATGWPLPMDLPHSAGH*AAPKRV
Trigger: AACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTG...GGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCGATCCTGAGAAAAGGTaGCTGCCCCGTCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GWVAATQATGWPLPMDLPDPEKR*LPRPMG
Trigger: CCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATC...GGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp GCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGCGTCAGTCGGTGCCGTaGCGCCACGCGGAGACGTCG +
Preference number: 4 (lower is better)
Translates to: ASSFATTCRALSRLKHIGRQSVP*RHAETS
Trigger: CGACGTCTCCGCGTGGCGTCACGGCACCGACTGACG...CCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGGGTCTGCGGCCATGGTaGGTGGCCGTCAGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PEELHQEAAYTGGMILELGLRPW*VAVSRC
Trigger: GCACCGACTGACGGCCACCCACCATGGCCGCAGACC...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCTGGACCCACTCCTTCTaGCCATCCAGGTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GWVAATQATGWPLPMDLPWTHSF*PSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCA...GGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGACGCAGGCAACAGGGTaGCCGTTGCCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: SNALATGWVAATQATGWPTQATG*PLPMDL
Trigger: CAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGT...CGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAAGCCTCTTCAGTTGCTaGTGTCCTTGTGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ALATGWVAATQATGWPLPSLFSC*CPCGLI
Trigger: GATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT...TGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp CACGTGGACCCACTCCTTCTGGCCATCCAGGTTGCGGAACTTGTAGGGACTGATCGTCAGTCGGTGCCGTaGCGCCACGCGGAGACGTCG +
Preference number: 4 (lower is better)
Translates to: HVDPLLLAIQVAELVGTDRQSVP*RHAETS
Trigger: CGACGTCTCCGCGTGGCGTCACGGCACCGACTGACG...ATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp AATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGTGGACTTGCCCATGGTaGCGATGTCAGGGACGAAGT +
Preference number: 4 (lower is better)
Translates to: NALATGWVAATQATGWPLWTCPW*RCQGRS
Trigger: ACTTCGTCCCTGACATCGTCACCATGGGCAAGTCCA...CAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGTTCATTTCTTCGCTTaGCCACTGGGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LNAGGFKCPRHRLGCGHAVHFFA*PLGLAA
Trigger: GGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAAC...TGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp AATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGTCCGGGCCCCGCCCCTaGCTGGGTCGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: NDLPSHTGQRLSEEGCNLSGPRP*LGRDLG
Trigger: CCCCAAATCCCGACCCAGGCAGGGGCGGGGCCCGGA...CAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp TCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGCCTGCCCTTCTCCTGTaGACTGCTGACCACACGTTT +
Preference number: 4 (lower is better)
Translates to: SNALATGWVAATQATGWPPALLL*TADHTF
Trigger: AAACGTGTGGTCAGCAGTGCACAGGAGAAGGGCAGG...CGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp TCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGCTTGCGGATGTGCTCTaGCACTTGGGAGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SNALATGWVAATQATGWPLADVL*HLGEVA
Trigger: GGCTACTTCTCCCAAGTGGCAGAGCACATCCGCAAG...CGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp CACCACGTCCTGGTGTCCCGTGTAGTGGCGAGCCAGCCTCAGGGCCAGGTCATTGCGCCCGCGTTGCGGTaGTTCATTTCTTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: HHVLVSRVVASQPQGQVIAPALR*FISSLA
Trigger: GGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGC...AATGACCTGGCCCTGAGGCTGGCTCGCCACTACACGGGACACCAGGACGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGGCCCCGGTAGGTGTCTaGGAGAGGTGCCACGTGGAC +
Preference number: 4 (lower is better)
Translates to: PEELHQEAAYTGGMILELAPVGV*ERCHVD
Trigger: GTCCACGTGGCACCTCTCCCAGACACCTACCGGGGC...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ACRGCLLLMVRNPLCIFKALATG*VAATQA
Trigger: TGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC...CTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CCA 90 bp TCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVRMASSFATTCRALSRLALATG*VAATQA
Trigger: TGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC...CAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp AATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGAGTACTCAACGCCGGTaGCTTCAAATGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: NALATGWVAATQATGWPLSTQRR*LQMPSP
Trigger: TGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT...CAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCGGAAGCTGCCTACACTaGTGGCATGATCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GWVAATQATGWPLPMDLPGSCLH*WHDPGA
Trigger: AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCC...GGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp TGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGCTCCGGCAGGGTCTCTaGCAGCCTCTGCGCATAGTC +
Preference number: 4 (lower is better)
Translates to: CHLGEVASRGNDLPSHTGLRQGL*QPLRIV
Trigger: GACTATGCGCAGAGGCTGTCAGAGACCCTGCCGGAG...CCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR TCA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTGTTCTCCTTCAGCCTTaGTACCAAGTAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRVLLQP*YQVGSL
Trigger: GAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAAC...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp TGCCCAACGTGCGCCACATTGCTGATGCAATCGATGTATTCTGCCCCCTGTTCATCCGGGCCCCGCCCCTaGCTGGGTCGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: CPTCATLLMQSMYSAPCSSGPRP*LGRDLG
Trigger: CCCCAAATCCCGACCCAGGCAGGGGCGGGGCCCGGA...TGAACAGGGGGCAGAATACATCGATTGCATCAGCAATGTGGCGCACGTTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTCAGCTTCGGGCGCTGGTCTaGGGCCATGGTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HHLPCIVQAEAHWGLKLQLRALV*GHGGWP
Trigger: CGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAG...CTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp AGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RLGCGHAGNRVAVANGLAVLLMC*LDHERV
Trigger: CACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAAC...GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp GTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACCAACAGGGTGGCCGTTaGCAATGGACTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: VLNAGGFKCPRHRLGCGHQQGGR*QWTCPW
Trigger: CCATGGGCAAGTCCATTGGCAACGGCCACCCTGTTG...GTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGAATGGCATCCAGCTTTaGCACCACCTGCCGTGCATT +
Preference number: 4 (lower is better)
Translates to: NALATGWVAATQATGWPLNGIQL*HHLPCI
Trigger: AATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATT...CAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp AGCTGGTGGCATAAGAATGCCCCTCCTCCACCACCACTGAGGAAGCACCAGCTCTGGACCACGAGAGGGTaGCAGTGCCCAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SWWHKNAPPPPPLRKHQLWTTRG*QCPTCA
Trigger: GGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCA...GAGCTGGTGCTTCCTCAGTGGTGGTGGAGGAGGGGCATTCTTATGCCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp GGAGAGGTGCCACGTGGACCCACTCCTTCTGGCCATCCAGGTTGCGGAACTTGTGGGAGAGGTGCCACGTaGACCCACTCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GEVPRGPTPSGHPGCGTCGRGAT*THSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGCACCTCTCCC...ACAAGTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCACGTGGCACCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACTCTGCCCTCCCACACTaGGCAGAGACTCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: VLNAGGFKCPRHRLGCGHSALPH*AETQRR
Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA...GTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQALATG*VAATQA
Trigger: TGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTGCTGCAATCTGTTGTTaGGTTGGGCAGTGCATACCA +
Preference number: 4 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRAAICC*VGQCIP
Trigger: TGGTATGCACTGCCCAACTCAACAACAGATTGCAGC...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp CGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGAACCTGGATCTCATCTaGAACAAAGACCCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RWLQMPSPQAGLRPRRQQNLDLI*NKDPSG
Trigger: GCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTT...CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp AGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCGCTGCATCAGGAAGCTaGCTACACTGGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: RLGCGHAGNRVAVANGLAAASGS*LHWWHD
Trigger: ATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGC...GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp TTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGCAGAGAGCCTGGGTCGGGATTTaGGGCTCAGGTTCGCACTCG +
Preference number: 4 (lower is better)
Translates to: LGEVASRGNDLPSHTGQRAWVGI*GSGSHS
Trigger: CGAGTGCGAACCTGAGCCCCAAATCCCGACCCAGGC...TCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCTGCGGCCATGGTGGGTaGCCGTCAGTCGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: YTGGMILELLLLQDIQDGCGHGG*PSVGAV
Trigger: CACGGCACCGACTGACGGCCACCCACCATGGCCGCA...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGGCTGGTCTGCGGCCATaGTGGGTGGCCGTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: TEEAPAPFSFQRLQLLTWAGLRP*WVAVSR
Trigger: CCGACTGACGGCCACCCACCATGGCCGCAGACCAGC...CCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp TTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGCAGAGAGGCATAGGCCATAGCTaGGTTGGGGTGGTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LGEVASRGNDLPSHTGQRGIGHS*VGVVLP
Trigger: CGGGAGGACCACCCCAACCCAGCTATGGCCTATGCC...TCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGCCCTCGCCACAGGCTaGGTTGCGGCCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPALATG*VAATQA
Trigger: TGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HRLGCGHAGNRVAVANGLSCLHW*HDPGAA
Trigger: AGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT...AAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCGGCTGCCCCGTCCCATaGGGACTCCATAAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: YTGGMILELLLLQDIQDGGCPVP*GLHKAA
Trigger: CGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCC...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CAA 72 bp GTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCAGTGCCCAACGTGCGC +
Preference number: 4 (lower is better)
Translates to: VGVEHLVLLMCC*DHERVAVPNVR
Trigger: GCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp AGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: RMASSFATTCRALSRLKHSQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...GTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp GCCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTCCTACACTGGTGGCATaGTCCTGGAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARGAASGSCLHWWHDPGAPTLVA*SWSCSF
Trigger: GAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGG...AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp TGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCCAGCCCCAAGAGCCCAACACCCCTaGCATCCCCGACGATGGGAT +
Preference number: 4 (lower is better)
Translates to: WHDPGAAPSPRHSGRPAPRAQHP*HPRRWD
Trigger: ATCCCATCGTCGGGGATGTCAGGGGTGTTGGGCTCT...TGGGGCTGGCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp GCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCCTCCAGTCTCCCGGATCCTaGGAAAAGGTGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ACLPGQSQPGSHLQQRPLQSPGS*EKVAAP
Trigger: CGGGGCAGCCACCTTTTCTCAGGATCCGGGAGACTG...GAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGGTGGCCGTCAGTCGGTaGCGTGACGCCACGCGGAGA +
Preference number: 4 (lower is better)
Translates to: QKCLPTRPKPTWISSATKVAVSR*RDATRR
Trigger: TCTCCGCGTGGCGTCACGGCACCGACTGACGGCCAC...CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp GGAATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCGAGCTGATGAGCCGTTaGCTCAGGGCCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: GMICPPTLGRDSAKKAAIELMSR*LRASVS
Trigger: CGACACGCTGGCCCTGAGGCAACGGCTCATCAGCTC...GATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp CCTGGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACGTTGCTGCCCGAGGAGCTaGATCAGGAAGCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: PGSAHVLLGPREGGSAQRCCPRS*IRKLPT
Trigger: TGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGCA...ACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGGGCAGCCTCTTCAGTTaGTGGTGTCCTTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PEELHQEAAYTGGMILELGSLFS*WCPCGL
Trigger: GAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCC...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp TGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACGTGCGCCACATTGCTGATGGCAGCCTCTTCAGTTaGTGGTGTCCTTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CCLDHERVAVPNVRHIADGSLFS*WCPCGL
Trigger: GAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCC...ATCAGCAATGTGGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp TTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCTCCCAGGGCCATCAGTaGTCAGCAAAACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: FKCPRHRLGCGHAGNRVASQGHQ*SAKRSS
Trigger: AGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGA...GGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp CTCTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTCAGCCTTCCGGCCCGTaGTCGTGCCTTGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LFHVSQNGIQLCHHLPCIQPSGP*SCLGSP
Trigger: GGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTG...AATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGTGCGGCCATGGTGGGTaGCCGTCAGTCGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRCGHGG*PSVGAV
Trigger: CACGGCACCGACTGACGGCCACCCACCATGGCCGCA...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTTGCGGCCATGGTGGGTaGCCGTCAGTCGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPCGHGG*PSVGAV
Trigger: CACGGCACCGACTGACGGCCACCCACCATGGCCGCA...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGACGTCGGCCTTCGGGCGCTaGTCTGCGGCCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLIRSTPMKSPTPLTSPTSAFGR*SAAMVG
Trigger: ACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGA...CGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGTCTGCCCTCCCACACTaGGCAGAGACTCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: CHLGEVASRGNDLPSHTGSALPH*AETQRR
Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA...CCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CCA 90 bp AGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCCATGTCAGTCAGAATaGCATCCAGCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RLGCGHAGNRVAVANGLAPCQSE*HPALPP
Trigger: TGGTGGCAAAGCTGGATGCCATTCTGACTGACATGG...GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQSQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR TCA 90 bp GTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCTGCCCCCAAACGTGTTaGAGTACTCAACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: VEVLNAGGFKCPRHRLGCCPQTC*STQRRW
Trigger: CCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCA...GCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCGAGCTCAGGTGGCCGTaGTACGCACGTGCGCCACAT +
Preference number: 4 (lower is better)
Translates to: YTGGMILELLLLQDIQDGELRWP*YARAPH
Trigger: ATGTGGCGCACGTGCGTATCACGGCCACCTGAGCTC...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp ACTTCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTGTGGCCGTCAGTCGGTaGCGTGACGCCACGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TSGCSSQGHQCSAKRSSPVAVSR*RDATRR
Trigger: TCTCCGCGTGGCGTCACGGCACCGACTGACGGCCAC...AGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTCCCGTGGTCGTGCCTTaGCAGTCCCGCGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPPVVVP*QSRAGT
Trigger: AGTTCCTGCGCGGGACTGCCAAGGCACGACCACGGG...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTTCTTCGCTTGCCCACTaGGCCTGGCAGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPSSLAH*AWQPSG
Trigger: GCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGA...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp AGTTCTCCTTCAGCCTTGATACCAAGTAGGCAGCCTCTTCAGTTGCTGGTGTCCGGTCTGCGGCCATGGTaGGTGGCCGTCAGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SSPSALIPSRQPLQLLVSGLRPW*VAVSRC
Trigger: GCACCGACTGACGGCCACCCACCATGGCCGCAGACC...GGACACCAGCAACTGAAGAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACAGCTGGTCTGCGGCCATaGTGGGTGGCCGTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTAGLRP*WVAVSR
Trigger: CCGACTGACGGCCACCCACCATGGCCGCAGACCAGC...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTCGGCCTTCGGGCGCTaGTCTGCGGCCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGSAFGR*SAAMVG
Trigger: ACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGA...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGTGGACCACGAGAGGGTaGCAGTGCCCAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRWTTRG*QCPTCA
Trigger: GGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCA...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp TGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCCAGCCCCAACGCAGGCAACAGGGTaGCCGTTGCCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: WHDPGAAPSPRHSGRPAPTQATG*PLPMDL
Trigger: CAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGT...TGGGGCTGGCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp AGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTACACAGCGCAGGACACTaGGCTGCCCCCAAACGTGTT +
Preference number: 4 (lower is better)
Translates to: SFATTCRALSRLKHIGGLHSAGH*AAPKRV
Trigger: AACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTG...TAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp CTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCACAGGCTGAAGCACATTaGGGGCTTAAACTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LNAGGFKCPRHRLGCGHAQAEAH*GLKLQD
Trigger: ATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTG...TGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTCGTCAGTCGGTGCCGTaGCGCCACGCGGAGACGTCG +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIRQSVP*RHAETS
Trigger: CGACGTCTCCGCGTGGCGTCACGGCACCGACTGACG...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CCAAGAGAATGGAAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTGGCCCCTCCGGCAGGGTCTCTaGCAGCCTCTGCGCATAGTC +
Preference number: 4 (lower is better)
Translates to: PREWKRSPEERAQREKWPLRQGL*QPLRIV
Trigger: GACTATGCGCAGAGGCTGTCAGAGACCCTGCCGGAG...GGGCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCATTCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR TCA 90 bp CAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGCTCCGGCAGGGTCTCTaGCAGCCTCTGCGCATAGTC +
Preference number: 4 (lower is better)
Translates to: QKCLPTRPKPTWISSATKLRQGL*QPLRIV
Trigger: GACTATGCGCAGAGGCTGTCAGAGACCCTGCCGGAG...CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR TCA 90 bp GCCTTGATACCAAGTAGGCAGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: ALIPSRQPLQLLVSLWPHSQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...ATGAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCTACTTGGTATCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp AGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACCCTACACTGGTGGCATaGTCCTGGAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RMASSFATTCRALSRLKHPTLVA*SWSCSF
Trigger: GAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGG...GTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGAGAGCCCAACACCCCTaGCATCCCCGACGATGGGAT +
Preference number: 4 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWRAQHP*HPRRWD
Trigger: ATCCCATCGTCGGGGATGTCAGGGGTGTTGGGCTCT...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTTCCGGCCCGTGGTCGTaGCTTGGCAGTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACISGPWS*LGSPAQ
Trigger: CTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGA...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR GCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGTCCGGGCCCCGCCCCTaGCTGGGTCGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVSGPRP*LGRDLG
Trigger: CCCCAAATCCCGACCCAGGCAGGGGCGGGGCCCGGA...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTCTTCGGGCGCTGGTCTaGGGCCATGGTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACILRALV*GHGGWP
Trigger: CGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAG...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGAGCTGATGAGCCGTTaGCTCAGGGCCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRELMSR*LRASVS
Trigger: CGACACGCTGGCCCTGAGGCAACGGCTCATCAGCTC...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR GCA 90 bp GGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCCAGCCCCACCTCAGCGAAGAAGGCTaGAATCTTCCTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GMILELLLLQDIQDGQPHLSEEG*NLPALL
Trigger: GAGAAGGGCAGGAAGATTGCAGCCTTCTTCGCTGAG...GTGGGGCTGGCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCCTCTGGAAGGCCCAGAAGTaGTTGCCTACCCGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ACLPGQSQPGSHLQQRPLWKAQK*LPTRPK
Trigger: CTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCA...GAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR GCA 90 bp CCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCCAACAGGGTGGCCGTTaGCAATGGACTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: PNVLKYSTPVASNALATGQQGGR*QWTCPW
Trigger: CCATGGGCAAGTCCATTGGCAACGGCCACCCTGTTG...GCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAGGCAGCCTCTTCAGTTaGTGGTGTCCTTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SFATTCRALSRLKHIGGLGSLFS*WCPCGL
Trigger: GAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCC...TAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PNVLKYSTPVASNALATGCHHLP*IVQAEA
Trigger: TGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCA...GCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCTGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LHQEAAYTGGMILELLLLCHHLP*IVQAEA
Trigger: TGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCA...GAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CTCAGCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTAGCTTTGCCACCACCTaGCGTGCATTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSLPRLLAADGKEPAVHLSFATT*RALSRL
Trigger: CAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT...AAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATACTTGCCCACTGGGCCTaGCAGCCTTCCGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSILAHWA*QPSGPW
Trigger: CCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAG...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTTCATCTTCGCTTGCCCACTaGGCCTGGCAGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGCSSQGHQCSAKRSSPSSSLAH*AWQPSG
Trigger: GCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGA...TGAAGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp AATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGGCGCCCGCGTTGCGGTaGTTCATTTCTTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: NDLPSHTGQRLSEEGCNLAPALR*FISSLA
Trigger: GGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGC...CAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGCCTGGGTCGGGATTTaGGGCTCAGGTTCGCACTCG +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRAWVGI*GSGSHS
Trigger: CGAGTGCGAACCTGAGCCCCAAATCCCGACCCAGGC...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGGCCCCGGTAGGTGTCTaGGAGAGGTGCCACGTGGAC +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRAPVGV*ERCHVD
Trigger: GTCCACGTGGCACCTCTCCCAGACACCTACCGGGGC...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp AGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTATCTGCCCTCCCACACTaGGCAGAGACTCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SFATTCRALSRLKHIGGLSALPH*AETQRR
Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA...TAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGACGCAGGCAACAGGGTaGCCGTTGCCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: ACRGCLLLMVRNPLCIFKTQATG*PLPMDL
Trigger: CAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGT...CTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CCA 90 bp CCTGGAGTCTGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCAGCCTCTTCAGTTGCTaGTGTCCTTGTGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PGVCHLGEVASRGNDLPSSLFSC*CPCGLI
Trigger: GATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT...GGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAGACTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp AGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCGAGATGAGTTTCTTCTaGAGTACACTTAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RLGCGHAGNRVAVANGLAEMSFF*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGAAGAAACTCATCTC...GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGCTCCGGCAGGGTCTCTaGCAGCCTCTGCGCATAGTC +
Preference number: 4 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLLRQGL*QPLRIV
Trigger: GACTATGCGCAGAGGCTGTCAGAGACCCTGCCGGAG...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR TCA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PEELHQEAAYTGGMILELGTCRD*CQSGSS
Trigger: TGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCC...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGAAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRSQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR TCA 90 bp ATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGTTGTTGCCCCCAAACGTGTTaGAGTACTCAACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ICPPTLGRDSAKKAAICCCPQTC*STQRRW
Trigger: CCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCA...ACAACAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR TCA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAACCTACACTGGTGGCATaGTCCTGGAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQPTLVA*SWSCSF
Trigger: GAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGG...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp CTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTAGAGCCCAACACCCCTaGCATCCCCGACGATGGGAT +
Preference number: 4 (lower is better)
Translates to: LPCQSEWHPALPPPAVHCRAQHP*HPRRWD
Trigger: ATCCCATCGTCGGGGATGTCAGGGGTGTTGGGCTCT...ACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp CAGGACACTGGGCTGCCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAGTTCTCCTTCAGCCTTaGTACCAAGTAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QDTGLPPNVLKYSTPVASVLLQP*YQVGSL
Trigger: GAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAAC...TGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAGCCCAGTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTCCGAAGCGCCCGCGTTaGGGTGGTTCATTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPPKRPR*GGSFLR
Trigger: GCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGG...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTGTGGCCGTCAGTCGGTaGCGTGACGCCACGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIVAVSR*RDATRR
Trigger: TCTCCGCGTGGCGTCACGGCACCGACTGACGGCCAC...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp CACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCAATCGATGTATTCTaGCCCCTGTTCATCGTACAT +
Preference number: 4 (lower is better)
Translates to: HRLGCGHAGNRVAVANGLAIDVF*PLFIVH
Trigger: ATGTACGATGAACAGGGGGCAGAATACATCGATTGC...AAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCTCCACGATGTTGTCATaGAGGTACCGGCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VEVLNAGGFKCPRHRLGCSTMLS*RYRLLV
Trigger: CACCAACAGCCGGTACCTGCATGACAACATCGTGGA...GCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp GAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACGCAGGGGGAATGATCTaGCCTCCCACACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: EVLAYPAKANLDLICNKDAGGMI*PPTLGR
Trigger: TCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGC...GTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR GCA 90 bp GAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTAGACCCCTCCGGCCTTaGGGATGTGCTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: EAAYTGGMILELLLLQDIRPLRP*GCALPL
Trigger: AAGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCT...AATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp AACCCGCTGTGCATCTTCAAGAGTAAGAAGCAAGGCCCACTCACCTGGAGTACAGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: NPLCIFKSKKQGPLTWSTAGGFK*PRHRLG
Trigger: ACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGC...TGTACTCCAGGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCACAGCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR GCA 90 bp AGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAATGCTGCCCGAGGAGCTaGATCAGGAAGCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: SQNGIQLCHHLPCIVQAECCPRS*IRKLPT
Trigger: TGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGCA...TTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp TGGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACCCCGTGGTCGTGCCTTaGCAGTCCCGCGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: WCPCGLIFDQIHTNEEPNPVVVP*QSRAGT
Trigger: AGTTCCTGCGCGGGACTGCCAAGGCACGACCACGGG...GTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTCAGCCTTCCGGCCCGTaGTCGTGCCTTGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACQPSGP*SCLGSP
Trigger: GGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTG...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR CCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGCCTGGGTCGGGATTTaGGGCTCAGGTTCGCACTCG +
Preference number: 4 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLAWVGI*GSGSHS
Trigger: CGAGTGCGAACCTGAGCCCCAAATCCCGACCCAGGC...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTGGTCTGCGGCCATGGTaGGTGGCCGTCAGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACGLRPW*VAVSRC
Trigger: GCACCGACTGACGGCCACCCACCATGGCCGCAGACC...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTGCTGGTCTGCGGCCATaGTGGGTGGCCGTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACAGLRP*WVAVSR
Trigger: CCGACTGACGGCCACCCACCATGGCCGCAGACCAGC...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp AGCTCCAGCAATGATCCCAGAATTCAGGAAATAGAACACACAGAGCTGCTCCGGTGGACCACGAGAGGGTaGCAGTGCCCAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSSNDPRIQEIEHTELLRWTTRG*QCPTCA
Trigger: GGCGCACGTTGGGCACTGCCACCCTCTCGTGGTCCA...CCGGAGCAGCTCTGTGTGTTCTATTTCCTGAATTCTGGGATCATTGCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGTGGACCCACTCCTTCTaGCCATCCAGGTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWWTHSF*PSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCA...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGGGGAGAGGTGCCACGTaGACCCACTCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRGRGAT*THSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGCACCTCTCCC...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp TGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGCGGCCAAAGCCAACCTaGATCTCATCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: CHLGEVASRGNDLPSHTGRPKPT*ISSATK
Trigger: CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCG...CCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR TCA 90 bp GCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGCGTGCGCCACATTGCTaGTGCAATCGATGTATTCTG +
Preference number: 4 (lower is better)
Translates to: ASSFATTCRALSRLKHIGRAPHC*CNRCIL
Trigger: CAGAATACATCGATTGCATCAGCAATGTGGCGCACG...CCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR TCA 90 bp ATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGCCTCGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ICPPTLGRDSAKKAAICLGTCRD*CQSGSS
Trigger: TGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCC...GAGGCAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR TCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGCCTACACTGGTGGCATaGTCCTGGAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRPTLVA*SWSCSF
Trigger: GAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGG...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGAGAGCCCAACACCCCTaGCATCCCCGACGATGGGAT +
Preference number: 4 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLRAQHP*HPRRWD
Trigger: ATCCCATCGTCGGGGATGTCAGGGGTGTTGGGCTCT...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTAGAGCCCAACACCCCTaGCATCCCCGACGATGGGAT +
Preference number: 4 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGRAQHP*HPRRWD
Trigger: ATCCCATCGTCGGGGATGTCAGGGGTGTTGGGCTCT...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CTCAGCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTGTTCTCCTTCAGCCTTaGTACCAAGTAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLPRLLAADGKEPAVHLVLLQP*YQVGSL
Trigger: GAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAAC...AAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR GCA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGCTGGTTCTGCTCATGTaGTGCTTGGACCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWLVLLM*CLDHER
Trigger: CCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAG...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp TCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGGCAGGGGGAATGATCTaGCCTCCCACACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSLIRSTPMKSPTPLTSPAGGMI*PPTLGR
Trigger: TCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGC...CGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp CTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGCAGGGGGAATGATCTaGCCTCCCACACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LIFDQIHTNEEPNTPDIPAGGMI*PPTLGR
Trigger: TCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGC...GGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp GCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCCTCAACCTGGATCTCATCTaGAACAAAGACCCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ACLPGQSQPGSHLQQRPLNLDLI*NKDPSG
Trigger: GCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTT...GAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR GCA 90 bp CTGAAGCACATTGGGGGCTTAAACTTCAGGATGTTCCTCCCAGGGCCATCAGTGTGGAAGGCCCAGAAGTaGTTGCCTACCCGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKHIGGLNFRMFLPGPSVWKAQK*LPTRPK
Trigger: CTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCA...CACTGATGGCCCTGGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS-3UTR GCA 90 bp CCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGCTGCATCAGGAAGCTaGCTACACTGGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: PPNVLKYSTPVASNALATAASGS*LHWWHD
Trigger: ATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGC...TGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCATGCTGCCCGAGGAGCTaGATCAGGAAGCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: SCLHWWHDPGAAPSPRHSCCPRS*IRKLPT
Trigger: TGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGCA...TGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGGCAGCCTCTTCAGTTaGTGGTGTCCTTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPGSLFS*WCPCGL
Trigger: GAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGTGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRCHHLP*IVQAEA
Trigger: TGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCA...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp TCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGACGAGCTTTGCCACCACCTaGCGTGCATTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLIRSTPMKSPTPLTSPTSFATT*RALSRL
Trigger: CAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT...CGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAAATGGCATCCAGCTTTaGCACCACCTGCCGTGCATT +
Preference number: 4 (lower is better)
Translates to: SFATTCRALSRLKHIGGLNGIQL*HHLPCI
Trigger: AATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATT...TAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACTGAGAAAAGGTGGCTaGCCCGTCCCATGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRLRKGG*PVPWGL
Trigger: GAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAG...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGTGTCTGATGAGCCGTTaGCTCAGGGCCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLCLMSR*LRASVS
Trigger: CGACACGCTGGCCCTGAGGCAACGGCTCATCAGACA...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CATCTGCAACAAAGACCCCTCCGGCCTTGCGGATGTGCTCTGCCACTTGGGAGAAAGAAGGCTGCAATCTaGCTCCTGCAGATTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HLQQRPLRPCGCALPLGRKKAAI*LLQICL
Trigger: CAGGCAAATCTGCAGGAGGCAGATTGCAGCCTTCTT...TCTCCCAAGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTTTGTTGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGTGCTCATGTGCTGCTTaGACCACGAGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRCSCAA*TTRGWQ
Trigger: CTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCA...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp CCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAATGGACCCACTCCTTCTaGCCATCCAGGTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PEVLAYPAKANLDLICNKWTHSF*PSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCA...TTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CCA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGAGTACTCAACGCCGGTaGCTTCAAATGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWSTQRR*LQMPSP
Trigger: TGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGCACAGCGCAGGACACTaGGCTGCCCCCAAACGTGTT +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRHSAGH*AAPKRV
Trigger: AACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTG...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAGGAAGCTGCCTACACTaGTGGCATGATCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQGSCLH*WHDPGA
Trigger: AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCC...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGTTAGGAGGAGGGGGTaGGTAGCATTATGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPVRRRG*VALWPR
Trigger: CCGAGGCCATAATGCTACCCACCCCCTCCTCCTAAC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTGTTAGGAGGAGGGGGTaGGTAGCATTATGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPCQSEWHPALPPPAVHCVRRRG*VALWPR
Trigger: CCGAGGCCATAATGCTACCCACCCCCTCCTCCTAAC...ACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGCAGTGCATACCACGTaGACCCACTCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRAVHTT*THSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGC...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp CCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGCAGTGCATACCACGTaGACCCACTCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PEVLAYPAKANLDLICNKAVHTT*THSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGC...TTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CCA 90 bp GTCCAGGCTGAAGCACATTGGGGGCTTAAACTTCAGGATGTTCCTCCCAGGGCCCGGCCAAAGCCAACCTaGATCTCATTCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: VQAEAHWGLKLQDVPPRARPKPT*ISFCHL
Trigger: CAAGTGGCAGAATGAGATCCAGGTTGGCTTTGGCCG...GGCCCTGGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS-3UTR CCA 90 bp CATCTGCAACAAAGACCCCTCCGGCCTTGCGGATGTGCTCTGCCACTTGGGAGATGCCTGTTTCTTCCTTaGACTCCTGCAGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLQQRPLRPCGCALPLGRCLFLP*TPAEVF
Trigger: GAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCA...TCTCCCAAGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTTTGTTGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
3UTR CAA 72 bp TCCACGATGTTGTCATGCAGGTACCGGCTGTTGGTGTaGAGCACCTGGTTCTGCTCATGTGCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: STMLSCRYRLLV*STWFCSCAAWT
Trigger: GGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp TCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGACGACCGGCTGTTGGTGTTaGGCACCTGGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLIRSTPMKSPTPLTSPTTGCWC*APGSAH
Trigger: ATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGT...CGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp CTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGCCTCCTCAGGTCATTGGCTTCTaGCCCAGAATTCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: LPSHTGQRLSEEGCNLPPQVIGF*PRIQEI
Trigger: TATTTCCTGAATTCTGGGTCAGAAGCCAATGACCTG...AGGAGGCAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR TCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGTCTCCTGTGCACTGCTaGCCACACGTTTCACCTCGT +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRSPVHC*PHVSPR
Trigger: ACGAGGTGAAACGTGTGGTCAGCAGTGCACAGGAGA...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR TCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSISQQGE*SALPHW
Trigger: CCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCT...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp GGCAGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACTGGACTTGCCCATGGTaGCGATGTCAGGGACGAAGT +
Preference number: 4 (lower is better)
Translates to: GSLFSCWCPCGLIFDQIHWTCPW*RCQGRS
Trigger: ACTTCGTCCCTGACATCGTCACCATGGGCAAGTCCA...GTGGATCTGATCAAAGATGAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGTGCCCCCAAACGTGTTaGAGTACTCAACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRCPQTC*STQRRW
Trigger: CCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCA...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTCCTACACTGGTGGCATaGTCCTGGAGCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGPTLVA*SWSCSF
Trigger: GAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGG...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGGTTCATTTCTTCGCTTaGCCACTGGGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRVHFFA*PLGLAA
Trigger: GGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAAC...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp CTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGGTTCATTTCTTCGCTTaGCCACTGGGCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LVASSLIRSTPMKSPTPLVHFFA*PLGLAA
Trigger: GGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAAC...CAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GTGGTAACTGTCAATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTCTTCGGGCGCTGGTCTaGGGCCATGGTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VVTVNYCWDRVRQCSKEILRALV*GHGGWP
Trigger: CGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAG...AATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp ACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGAATGCCCGAGCTGATGAGCCGTTaGCTCAGGGCCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: TWKSLESTQNKAGGIRMPELMSR*LRASVS
Trigger: CGACACGCTGGCCCTGAGGCAACGGCTCATCAGCTC...GGGCATTCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGTCCACGATGTTGTCATaGAGGTACCGGCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TEEAPAPFSFQRLQLLTWSTMLS*RYRLLV
Trigger: CACCAACAGCCGGTACCTGCATGACAACATCGTGGA...CCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp TGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACCAACAGGGTGGCCGTTaGCAATGGACTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: CGLIFDQIHTNEEPNTPDQQGGR*QWTCPW
Trigger: CCATGGGCAAGTCCATTGGCAACGGCCACCCTGTTG...GTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR GCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVAGGFK*PRHRLG
Trigger: ACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGC...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCACTGACTTGAGGGGATaGAGACATCTGGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: VEVLNAGGFKCPRHRLGCTDLRG*RHLGYS
Trigger: GGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGT...GCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp ACCCGCTGTGCATCTTCAAGAGTAAGAAGCAAGGCCCACTCACCTGGAGTACACTCAGCTTGCCGAGGCTaGTTGCTGCTGATGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TRCASSRVRSKAHSPGVHSACRG*LLLMVR
Trigger: CCTTACCATCAGCAGCAAGCAGCCTCGGCAAGCTGA...GTGTACTCCAGGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCACAGCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR GCA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGAACAGGAGAGCACAGTaGCCGGGAAGCAAGATGACA +
Preference number: 4 (lower is better)
Translates to: TEEAPAPFSFQRLQLLTWNRRAQ*PGSKMT
Trigger: TGTCATCTTGCTTCCCGGGCACTGTGCTCTCCTGTT...CCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGCCGTGATACGCACGTaGGCCACATTGCTGATGCAA +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPAVIRT*ATLLMQ
Trigger: TTGCATCAGCAATGTGGCGCACGTGCGTATCACGGC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCTTCGCTTGCCCACTaGGCCTGGCAGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYSSLAH*AWQPSG
Trigger: GCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGA...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAATCGGCCTTCGGGCGCTaGTCTGCGGCCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QRDCFGFGNMEVPGIHTESAFGR*SAAMVG
Trigger: ACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGA...TTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp GGAATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTCAGGGCCAGGTCATTaGCTTCTGACCCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: GMICPPTLGRDSAKKAAISGPGH*LLTQNS
Trigger: TGAATTCTGGGTCAGAAGCCAATGACCTGGCCCTGA...GATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTGGCATAGGCCATAGCTaGGTTGGGGTGGTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVGIGHS*VGVVLP
Trigger: CGGGAGGACCACCCCAACCCAGCTATGGCCTATGCC...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTCTGCCCTCCCACACTaGGCAGAGACTCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGSALPH*AETQRR
Trigger: TCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CGATGTATTCTGCCCCCTGTTCATCGTACATGTACTGCCCTTGGGCCCGGACAAACGAAGTCTTTTCCCTaGAGCTGGAAGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RCILPPVHRTCTALGPGQTKSFP*SWKAQK
Trigger: CTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGT...TTGTCCGGGCCCAAGGGCAGTACATGTACGATGAACAGGGGGCAGAATACATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGACGCAGGCAACAGGGTaGCCGTTGCCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRTQATG*PLPMDL
Trigger: CAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGT...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTAGTACTCAACGCCGGTaGCTTCAAATGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPSTQRR*LQMPSP
Trigger: TGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACACAGCGCAGGACACTaGGCTGCCCCCAAACGTGTT +
Preference number: 4 (lower is better)
Translates to: GVLVASSLIRSTPMKSPTHSAGH*AAPKRV
Trigger: AACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTG...TGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGTAAGAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGCLLLMVRNPLCIFKSKSCLHW*HDPGAA
Trigger: AGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT...CTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CCA 90 bp TCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGACGAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLIRSTPMKSPTPLTSPTSCLHW*HDPGAA
Trigger: AGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT...CGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGGAAGCTGCCTACACTaGTGGCATGATCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPGSCLH*WHDPGA
Trigger: AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGATTCCAACAGACCAGTaGTTAGGAGGAGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRIPTDQ*LGGGGG
Trigger: CCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAAT...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGAATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCGGGGATGCAGACATCTaGGTTATTCCAACAGACCAG +
Preference number: 4 (lower is better)
Translates to: GMICPPTLGRDSAKKAAIGDADI*VIPTDQ
Trigger: CTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCC...GATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CCTGGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACGTAAAGCAGGAAGCAGATaGGGTAACAAGTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGSAHVLLGPREGGSAQRKAGSR*GNKSLK
Trigger: TTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTT...ACGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGTAAGCAAGGCCCACTCACCTaGAGTACACTTAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGCLLLMVRNPLCIFKSKQGPLT*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGGTGAGTGGGCCTTG...CTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR CAA 72 bp AGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATaGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: RMASSFATTCRA*SRLKHIGGLNF
Trigger: GAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR TCA 90 bp AATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NDLPSHTGQRLSEEGCNLGTCRD*CQSGSS
Trigger: TGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCC...CAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000510913.5
CDS-3UTR TCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGTCTCCTGTGCACTGCTaGCCACACGTTTCACCTCGT +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRSPVHC*PHVSPR
Trigger: ACGAGGTGAAACGTGTGGTCAGCAGTGCACAGGAGA...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR TCA 90 bp TGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCTGCCCCCAAACGTGTTaGAGTACTCAACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: CPCGLIFDQIHTNEEPNTCPQTC*STQRRW
Trigger: CCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCA...GGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp TGGGCTGCCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTGGGGTAACAAGTCGCTaGAACTTCGGATTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: WAAPKRVEVLNAGGFKCPGVTSR*NFGLFL
Trigger: CAGAAACAATCCGAAGTTTCAGCGACTTGTTACCCC...AGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR TCA 90 bp ACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGAATGCCCCTCCTCCACCACCACTaGGGAAGCACCAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TWKSLESTQNKAGGIRMPLLHHH*GSTSSL
Trigger: AAGGGAGCTGGTGCTTCCTCAGTGGTGGTGGAGGAG...GGGCATTCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGAAGGCTGCAATCTTCCTaGCCTTCTCCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRRLQSS*PSPVHC
Trigger: GCAGTGCACAGGAGAAGGGCAGGAAGATTGCAGCCT...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGCTCAGCGAAGAAGGCTaGAATCTTCCTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRLSEEG*NLPALL
Trigger: GAGAAGGGCAGGAAGATTGCAGCCTTCTTCGCTGAG...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTGCAGGGGGAATGATCTaGCCTCCCACACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVAGGMI*PPTLGR
Trigger: TCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGC...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGACCCCTCCGGCCTTaGGGATGTGCTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVRPLRP*GCALPL
Trigger: AAGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCT...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp GTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTGAATGCCTTTTCCAGTCCAGACCCCTCCGGCCTTaGGGATGTGCTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: VSSLDSCRGLLTECLFQSRPLRP*GCALPL
Trigger: AAGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCT...GGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGAACCTGGATCTCATCTaGAACAAAGACCCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRNLDLI*NKDPSG
Trigger: GCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTT...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp CCTCCTGCAGATTTGCCTGTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTTGGAAGGCCCAGAAGTaGTTGCCTACCCGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PPADLPVSSLDSCRGLLTWKAQK*LPTRPK
Trigger: CTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCA...AGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYAGGFK*PRHRLG
Trigger: ACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGC...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACGCTGCATCAGGAAGCTaGCTACACTGGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: EVLAYPAKANLDLICNKDAASGS*LHWWHD
Trigger: ATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGC...GTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp GGCTGGCTTAGGGCTGGAGCCTCAGCGTTTCACAACTTCTCACCTTCTCTTCCATCCCAGGGCCATCAGTaGTCAGCAAAACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: GWLRAGASAFHNFSPSLPSQGHQ*SAKRSS
Trigger: AGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGA...TGGAAGAGAAGGTGAGAAGTTGTGAAACGCTGAGGCTCCAGCCCTAAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTAATGGCATCCAGCTTTaGCACCACCTGCCGTGCATT +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPNGIQL*HHLPCI
Trigger: AATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATT...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp AAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCACTCCACAGGTGGTTaGAAAGCAGGAAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KCLPTRPKPTWISSATKTHSTGG*KAGSRW
Trigger: CCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTG...GGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGCCCGCGTTGCGGTaGTTCATTTCTTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIAPALR*FISSLA
Trigger: GGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGC...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp AAGACAGGGAAGGAGTGGCTAGAGAAGCTGATAGAAAACAGGAGAGCACAGTGCTGCTCATGTGCTGCTTaGACCACGAGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTGKEWLEKLIENRRAQCCSCAA*TTRGWQ
Trigger: CTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCA...GCACTGTGCTCTCCTGTTTTCTATCAGCTTCTCTAGCCACTCCTTCCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTACGAAGTCTTTTCCCTaGAGCTGGAAGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPTKSFP*SWKAQK
Trigger: CTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGT...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp TCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTTCAAGTACTCAACGCCGGTaGCTTCAAATGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SGCSSQGHQCSAKRSSPSSTQRR*LQMPSP
Trigger: TGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT...TGAAGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATACACAGCGCAGGACACTaGGCTGCCCCCAAACGTGTT +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIHSAGH*AAPKRV
Trigger: AACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTG...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLIRSTPMKSPTPLTSPSCLHW*HDPGAA
Trigger: AGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT...CGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp TCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGGGAAGCTGCCTACACTaGTGGCATGATCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSLIRSTPMKSPTPLTSPGSCLH*WHDPGA
Trigger: AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCC...CGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GCCTTGATACCAAGTAGGCAGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATAGCCTCTTCAGTTGCTaGTGTCCTTGTGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ALIPSRQPLQLLVSLWPHSLFSC*CPCGLI
Trigger: GATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT...ATGAGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCTACTTGGTATCAAGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp TTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGCCATGTCAGTCAGAATaGCATCCAGCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: LPRLLAADGKEPAVHLQEPCQSE*HPALPP
Trigger: TGGTGGCAAAGCTGGATGCCATTCTGACTGACATGG...CTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CCA 90 bp CTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGATTCCAACAGACCAGTaGTTAGGAGGAGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVASSLIRSTPMKSPTPLIPTDQ*LGGGGG
Trigger: CCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAAT...CAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGTCTCCACTCCACAGGTaGTTGCAAAGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRSPLHR*LQSRKQ
Trigger: CTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGA...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp CCACCACCACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTTGGATTTGGCAACATaGAAGTCCCTGGAATCCACA +
Preference number: 4 (lower is better)
Translates to: PPPLRKHQLPSLSRGSSSLDLAT*KSLEST
Trigger: TGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAA...AGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGTGGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp CTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCAATCTGTTGTTGAGTTaGGCAGTGCATACCACGTGG +
Preference number: 4 (lower is better)
Translates to: LHQEAAYTGGMILELLLLNLLLS*AVHTTW
Trigger: CCACGTGGTATGCACTGCCCAACTCAACAACAGATT...GAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp GAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACTCAGGGCCAGGTCATTaGCTTCTGACCTCACTAAGC +
Preference number: 4 (lower is better)
Translates to: EVLAYPAKANLDLICNKDSGPGH*LLTSLS
Trigger: GCTTAGTGAGGTCAGAAGCCAATGACCTGGCCCTGA...GTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CAA 72 bp GTATTCTGCCCCCTGTTCATCGTACATGTACTGCCCTaGGGCCCGGACAATCTTAACAGGATCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VFCPLFIVHVLP*GPDNLNRILGK
Trigger: TTTCCCGAGGATCCTGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTACGATGAACAGGGGGCAGAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
3UTR CAA 72 bp GCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATCTTaGATCAGATCCACACCAATGAAGAGCCCAACACCC +
Preference number: 4 (lower is better)
Translates to: ASSVAGVLVASS*IRSTPMKSPTP
Trigger: GGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACCAGCAACTGAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR TCA 90 bp CAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGGCATGTCACTGTTGTTaGGTTGGGCAGTGCATACCA +
Preference number: 4 (lower is better)
Translates to: QKCLPTRPKPTWISSATKACHCC*VGQCIP
Trigger: TGGTATGCACTGCCCAACTCAACAACAGTGACATGC...CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp ACTTCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTTCATCGTACATGTACTaGCCTTGGGCCCGGACAATC +
Preference number: 4 (lower is better)
Translates to: TSGCSSQGHQCSAKRSSPSSYMY*PWARTI
Trigger: GATTGTCCGGGCCCAAGGGCAGTACATGTACGATGA...AGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCATCGTACATGTACTaGCCTTGGGCCCGGACAATC +
Preference number: 4 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTSSYMY*PWARTI
Trigger: GATTGTCCGGGCCCAAGGGCAGTACATGTACGATGA...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp TACCAAGAGAATGGAAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTGGCCTGGTTCTGCTCATGTaGTGCTTGGACCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: YQENGRDHLRRGLREKSGLVLLM*CLDHER
Trigger: CCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAG...GCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCATTCTCTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTTGGAAGGCCCAGAAGTaGTTGCCTACCCGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIWKAQK*LPTRPK
Trigger: CTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCA...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTCAACAGGGTGGCCGTTaGCAATGGACTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACQQGGR*QWTCPW
Trigger: CCATGGGCAAGTCCATTGGCAACGGCCACCCTGTTG...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTTGCTGCCCGAGGAGCTaGATCAGGAAGCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACICCPRS*IRKLPT
Trigger: TGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGCA...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATATGCCACCACCTGCCGTaGATTGTCCAGGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSICHHLP*IVQAEA
Trigger: TGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCA...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAAGCTTTGCCACCACCTaGCGTGCATTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSISFATT*RALSRL
Trigger: CAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp CATCAGTGCTCAGCAAAACGTAGTTCTCCTTCAGCCTTGATACCAAGTAGGCAGAGCTTTGCCACCACCTaGCGTGCATTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HQCSAKRSSPSALIPSRQSFATT*RALSRL
Trigger: CAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCT...CTGCCTACTTGGTATCAAGGCTGAAGGAGAACTACGTTTTGCTGAGCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR GCA 90 bp AGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAACCTGGATCTCATTCTaGCACTTGGGAGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SCLHWWHDPGAAPSPRHSTWISF*HLGEVA
Trigger: GGCTACTTCTCCCAAGTGGCAGAATGAGATCCAGGT...TGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS-3UTR CCA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCTACATGTACTGCCCTTaGGCCCGGACAATCTTAACA +
Preference number: 4 (lower is better)
Translates to: YTGGMILELLLLQDIQDGYMYCP*ARTILT
Trigger: TGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTA...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTGCAAAGCAGGAAGCAGATGGGGTAACAAGTCGCTGAAACTTCGGATTGTTTGCTCATGTGCTGCTTaGACCACGAGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GCKAGSRWGNKSLKLRIVCSCAA*TTRGWQ
Trigger: CTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCA...AACAATCCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTTCAGGGCCAGGTCATTaGCTTCTGACCCAGAATTCA +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPSGPGH*LLTQNS
Trigger: TGAATTCTGGGTCAGAAGCCAATGACCTGGCCCTGA...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS-3UTR CCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTTGGACCCACTCCTTCTaGCCATCCAGGTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIWTHSF*PSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCA...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCACGAAGTCTTTTCCCTaGAGCTGGAAGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LIFDQIHTNEEPNTPDIPTKSFP*SWKAQK
Trigger: CTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGT...GGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACAAGTACTCAACGCCGGTaGCTTCAAATGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GVLVASSLIRSTPMKSPTSTQRR*LQMPSP
Trigger: TGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACT...TGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTGTTAGGAGGAGGGGGTaGGTAGCATTATGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIVRRRG*VALWPR
Trigger: CCGAGGCCATAATGCTACCCACCCCCTCCTCCTAAC...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTGGGGATGCAGACATCTaGGTTATTCCAACAGACCAG +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPGDADI*VIPTDQ
Trigger: CTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCC...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTGGGGATGCAGACATCTaGGTTATTCCAACAGACCAG +
Preference number: 4 (lower is better)
Translates to: EAAYTGGMILELLLLQDIGDADI*VIPTDQ
Trigger: CTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCC...AATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGCGTGCGCCACATTGCTaGTGCAATCGATGTATTCTG +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRRAPHC*CNRCIL
Trigger: CAGAATACATCGATTGCATCAGCAATGTGGCGCACG...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAACCGGCTGTTGGTGTTaGGCACCTGGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSITGCWC*APGSAH
Trigger: ATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGT...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR TCA 90 bp ACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGAATGCCCACCGGCTGTTGGTGTTaGGCACCTGGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TWKSLESTQNKAGGIRMPTGCWC*APGSAH
Trigger: ATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGT...GGGCATTCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR TCA 90 bp GTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTGAATGCCTTTTCCAGTCCACCGGCTGTTGGTGTTaGGCACCTGGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSSLDSCRGLLTECLFQSTGCWC*APGSAH
Trigger: ATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGT...GGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp CGATGTATTCTGCCCCCTGTTCATCGTACATGTACTGCCCTTGGGCCCGGACAAGCAATCGATGTATTCTaGCCCCTGTTCATCGTACAT +
Preference number: 4 (lower is better)
Translates to: RCILPPVHRTCTALGPGQAIDVF*PLFIVH
Trigger: ATGTACGATGAACAGGGGGCAGAATACATCGATTGC...TTGTCCGGGCCCAAGGGCAGTACATGTACGATGAACAGGGGGCAGAATACATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATACTGGTTCTGCTCATGTaGTGCTTGGACCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSILVLLM*CLDHER
Trigger: CCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAG...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp CCTCCTGCAGATTTGCCTGTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTTCCACGATGTTGTCATaGAGGTACCGGCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PPADLPVSSLDSCRGLLTSTMLS*RYRLLV
Trigger: CACCAACAGCCGGTACCTGCATGACAACATCGTGGA...AGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATACCTGCCCTTCTCCTGTaGACTGCTGACCACACGTTT +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIPALLL*TADHTF
Trigger: AAACGTGTGGTCAGCAGTGCACAGGAGAAGGGCAGG...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGCTGCAATCTTCCTaGCCTTCTCCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVRLQSS*PSPVHC
Trigger: GCAGTGCACAGGAGAAGGGCAGGAAGATTGCAGCCT...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp GTTTCTTCCTTGGACTCCTGCAGAGGTCTTCTAACTGAATGCCTTTTCCAGTCCCTTGCGGATGTGCTCTaGCACTTGGGAGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VSSLDSCRGLLTECLFQSLADVL*HLGEVA
Trigger: GGCTACTTCTCCCAAGTGGCAGAGCACATCCGCAAG...GGACTGGAAAAGGCATTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATCAACAGGGTGGCCGTTaGCAATGGACTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYQQGGR*QWTCPW
Trigger: CCATGGGCAAGTCCATTGGCAACGGCCACCCTGTTG...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGTCCCAGGGCCATCAGTaGTCAGCAAAACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLSQGHQ*SAKRSS
Trigger: AGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGA...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp TCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGACGACTGACTTGAGGGGATaGAGACATCTGGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: SLIRSTPMKSPTPLTSPTTDLRG*RHLGYS
Trigger: GGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGT...CGTCGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCTCCTTGCTCATTTCTaGATGTGTCCGCGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ASSLIRSTPMKSPTPLTSLLAHF*MCPRQS
Trigger: AGACTGACGCGGACACATGCAGAAATGAGCAAGGAG...GGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp TCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCGCGGCCAAAGCCAACCTaGATCTCATCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: SSLIRSTPMKSPTPLTSPRPKPT*ISSATK
Trigger: CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCG...CGGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGACGCAGGCAACAGGGTaGCCGTTGCCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVTQATG*PLPMDL
Trigger: CAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGT...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTAGCTGCCTACACTGGTaGCATGATCCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACSCLHW*HDPGAA
Trigger: AGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGGAAGCTGCCTACACTaGTGGCATGATCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIGSCLH*WHDPGA
Trigger: AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCC...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTATTCCAACAGACCAGTaGTTAGGAGGAGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIIPTDQ*LGGGGG
Trigger: CCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAAT...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTCCATTCCACCCCCAGTaGACAGAAAGGAAATTGACT +
Preference number: 4 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPPFHPQ*TERKLT
Trigger: AGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGG...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp TGCCCAACGTGCGCCACATTGCTGATGCAATCGATGTATTCTGCCCCCTGTTCACCATTCCACCCCCAGTaGACAGAAAGGAAATTGACT +
Preference number: 4 (lower is better)
Translates to: CPTCATLLMQSMYSAPCSPFHPQ*TERKLT
Trigger: AGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGG...TGAACAGGGGGCAGAATACATCGATTGCATCAGCAATGTGGCGCACGTTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp AGCCTCTTCAGTTGCTGGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCACGAAGTCTTTTCCCTaGAGTCTGCCACTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLFSCWCPCGLIFDQIHTTKSFP*SLPLGR
Trigger: TCTCCCAAGTGGCAGACTCCAGGGAAAAGACTTCGT...GGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGATCACTGTTGTTGAGTTaGGCAGTGCATACCACGTGG +
Preference number: 4 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRSLLLS*AVHTTW
Trigger: CCACGTGGTATGCACTGCCCAACTCAACAACAGTGA...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR TCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGTGGACTTGCCCATGGTaGCGATGTCAGGGACGAAGT +
Preference number: 4 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVWTCPW*RCQGRS
Trigger: ACTTCGTCCCTGACATCGTCACCATGGGCAAGTCCA...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACATGCCCCCAAACGTGTTaGAGTACTCAACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTCPQTC*STQRRW
Trigger: CCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCA...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp ACCCGCTGTGCATCTTCAAGAGTAAGAAGCAAGGCCCACTCACCTGGAGTACACAGAAAGGAAATTGACTaGCTTGAGGGGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: TRCASSRVRSKAHSPGVHRKEID*LEGMQT
Trigger: TGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCT...GTGTACTCCAGGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCACAGCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR TCA 90 bp GCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGTGTATTTGGATGAGATaGGTTTCTTCTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ACRGCLLLMVRNPLCIFKCIWMR*VSSLGR
Trigger: CCTTCCCAAAGAAGAAACTCATCTCATCCAAATACA...CTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR GCA 90 bp ACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGAATGCCCTCATCGTACATGTACTaGCCTTGGGCCCGGACAATC +
Preference number: 4 (lower is better)
Translates to: TWKSLESTQNKAGGIRMPSSYMY*PWARTI
Trigger: GATTGTCCGGGCCCAAGGGCAGTACATGTACGATGA...GGGCATTCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp GCAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AKRLLWIWQHGSPWNPHRVLLMC*LDHERV
Trigger: CACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAAC...TCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTTTGAGCACCTGGTTCTaGTCATGTGCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVLSTWF*SCAAWT
Trigger: GGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAA...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTGCTGCATCAGGAAGCTaGCTACACTGGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVAASGS*LHWWHD
Trigger: ATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGC...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACATGCTGCCCGAGGAGCTaGATCAGGAAGCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTCCPRS*IRKLPT
Trigger: TGTAGGCAGCTTCCTGATGCAGCTCCTCGGGCAGCA...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTAATGGCATCCAGCTTTaGCACCACCTGCCGTGCATT +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACNGIQL*HHLPCI
Trigger: AATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATT...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp CAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGGGTCTTCTAACTGAATaGCTTTTCCAGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: QKCLPTRPKPTWISSATKGLLTE*LFQSIL
Trigger: GAGGATGGACTGGAAAAGGCATTCAGTTAGAAGACC...CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp CCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAATCTTCCTTGGACTCCTaGAGAGGTCTTCTAACTGAA +
Preference number: 4 (lower is better)
Translates to: PEVLAYPAKANLDLICNKSSLDS*RGLLTE
Trigger: TTCAGTTAGAAGACCTCTGCAGGAGTCCAAGGAAGA...TTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR GCA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGATGCCTCCTGCAGATTTaGCTGTTTCTTCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRCLLQI*LFLPWT
Trigger: AGTCCAAGGAAGAAACAGGCAAATCTGCAGGAGGCA...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGCAGGCTGAAGCACATTaGGGGCTTAAACTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRQAEAH*GLKLQD
Trigger: ATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTG...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CCA 90 bp GTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACACAGGCTGAAGCACATTaGGGGCTTAAACTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VASSLIRSTPMKSPTPLTQAEAH*GLKLQD
Trigger: ATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTG...TGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp TGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCATGTCAGTCAGAATaGCATCCAGCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: CPCGLIFDQIHTNEEPNTPCQSE*HPALPP
Trigger: TGGTGGCAAAGCTGGATGCCATTCTGACTGACATGG...GGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CCA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGCCATTCCACCCCCAGTaGACAGAAAGGAAATTGACT +
Preference number: 4 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRPFHPQ*TERKLT
Trigger: AGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGG...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGCAACATGGAAGTCCCTaGAATCCACACAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: TEEAPAPFSFQRLQLLTWQHGSP*NPHRIK
Trigger: CTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTG...CCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp CCAAGAGAATGGAAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTGGCCCAGATTGCTTTGGATTTaGCAACATGGAAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PREWKRSPEERAQREKWPRLLWI*QHGSPW
Trigger: CCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCT...GGGCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCATTCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR TCA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVGTCRD*CQSGSS
Trigger: TGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCC...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACAGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTVLLMC*LDHERV
Trigger: CACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAAC...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp GCAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGATTGAGCACCTGGTTCTaGTCATGTGCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: AKRLLWIWQHGSPWNPHRLSTWF*SCAAWT
Trigger: GGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAA...TCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACACTTGCGGATGTGCTCTaGCACTTGGGAGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTLADVL*HLGEVA
Trigger: GGCTACTTCTCCCAAGTGGCAGAGCACATCCGCAAG...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp TACCAAGAGAATGGAAGAGATCACCTGAGGAGAGGGCTCAGAGAGAAAAGTGGCTACATGTACTGCCCTTaGGCCCGGACAATCTTAACA +
Preference number: 4 (lower is better)
Translates to: YQENGRDHLRRGLREKSGYMYCP*ARTILT
Trigger: TGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTA...GCCACTTTTCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCATTCTCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATACGGCCAAAGCCAACCTaGATCTCATCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIRPKPT*ISSATK
Trigger: CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCG...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGAGCCTCTTCAGTTGCTaGTGTCCTTGTGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVSLFSC*CPCGLI
Trigger: GATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGAGATGAGTTTCTTCTaGAGTACACTTAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLEMSFF*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGAAGAAACTCATCTC...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp ATAGTCCACGATGTTGTCATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTGAGATGAGTTTCTTCTaGAGTACACTTAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IVHDVVMQVPAVGVEHLVEMSFF*STLRQS
Trigger: GCTCTGCCTAAGTGTACTCCAGAAGAAACTCATCTC...AACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CCA 90 bp GGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCATTCCACCCCCAGTaGACAGAAAGGAAATTGACT +
Preference number: 4 (lower is better)
Translates to: GVLVASSLIRSTPMKSPTPFHPQ*TERKLT
Trigger: AGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGG...TGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGTAAGGATGAGTTTCTTCTTTaGGAAGGAGCATCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RGCLLLMVRNPLCIFKSKDEFLL*EGASVR
Trigger: TCTGACTGATGCTCCTTCCCAAAGAAGAAACTCATC...CTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
3UTR CAA 72 bp TTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTaGAGGGGATGCAGACATCTGGGTTATTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: FHPQWTERKLTD*RGCRHLGYSNR
Trigger: TCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACAGTTCTCCTTCAGCCTTaGTACCAAGTAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTVLLQP*YQVGSL
Trigger: GAGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAAC...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR TCA 90 bp CAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAAATGGAAGAGATCACCTaGGGAGAGGGCTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QRDCFGFGNMEVPGIHTEMEEIT*GEGSER
Trigger: TCTCTCTGAGCCCTCTCCTCAGGTGATCTCTTCCAT...TTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACATCATCGTACATGTACTaGCCTTGGGCCCGGACAATC +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTSSYMY*PWARTI
Trigger: GATTGTCCGGGCCCAAGGGCAGTACATGTACGATGA...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACATTGAGCACCTGGTTCTaGTCATGTGCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTLSTWF*SCAAWT
Trigger: GGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAA...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACATCCACGATGTTGTCATaGAGGTACCGGCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTSTMLS*RYRLLV
Trigger: CACCAACAGCCGGTACCTGCATGACAACATCGTGGA...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR GCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGTCCCAGGGCCATCAGTaGTCAGCAAAACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVSQGHQ*SAKRSS
Trigger: AGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGA...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR GCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAACTGACTTGAGGGGATaGAGACATCTGGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSITDLRG*RHLGYS
Trigger: GGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGT...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTACTGACTTGAGGGGATaGAGACATCTGGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACITDLRG*RHLGYS
Trigger: GGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGT...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATATACATGTACTGCCCTTaGGCCCGGACAATCTTAACA +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIYMYCP*ARTILT
Trigger: TGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTA...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACAAGCCTCTTCAGTTGCTaGTGTCCTTGTGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTSLFSC*CPCGLI
Trigger: GATGAGGCCACAAGGACACCAGCAACTGAAGAGGCT...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTCAGGCTGAAGCACATTaGGGGCTTAAACTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIQAEAH*GLKLQD
Trigger: ATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTG...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CCA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGCCATGTCAGTCAGAATaGCATCCAGCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVPCQSE*HPALPP
Trigger: TGGTGGCAAAGCTGGATGCCATTCTGACTGACATGG...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATGGGGATGCAGACATCTaGGTTATTCCAACAGACCAG +
Preference number: 4 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYGDADI*VIPTDQ
Trigger: CTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCC...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CCA 90 bp GTGGTAACTGTCAATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTGCTCAGAGAGAAAAGTaGCCCAGGATCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VVTVNYCWDRVRQCSKEIAQREK*PRISPK
Trigger: CTTGGGGCTGATCCTGGGCCACTTTTCTCTCTGAGC...AATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR TCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTCAGGTCATTGGCTTCTaGCCCAGAATTCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIQVIGF*PRIQEI
Trigger: TATTTCCTGAATTCTGGGTCAGAAGCCAATGACCTG...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS-3UTR TCA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAAGAAAGGAAATTGACTaGCTTGAGGGGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: PLKADFICKREVRLAFSIRKEID*LEGMQT
Trigger: TGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCT...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp CATCAGTGCTCAGCAAAACGTAGTTCTCCTTCAGCCTTGATACCAAGTAGGCAGAGAAAGGAAATTGACTaGCTTGAGGGGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: HQCSAKRSSPSALIPSRQRKEID*LEGMQT
Trigger: TGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCT...CTGCCTACTTGGTATCAAGGCTGAAGGAGAACTACGTTTTGCTGAGCACTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR GCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTGCAATCGATGTATTCTaGCCCCTGTTCATCGTACAT +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACIAIDVF*PLFIVH
Trigger: ATGTACGATGAACAGGGGGCAGAATACATCGATTGC...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR GCA 90 bp TGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCAGCAATCGATGTATTCTaGCCCCTGTTCATCGTACAT +
Preference number: 4 (lower is better)
Translates to: WIWQHGSPWNPHRIKLVAAIDVF*PLFIVH
Trigger: ATGTACGATGAACAGGGGGCAGAATACATCGATTGC...TGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp CAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTACATGTACTGCCCTTaGGCCCGGACAATCTTAACA +
Preference number: 4 (lower is better)
Translates to: QWTERKLTDLRGCRHLGYYMYCP*ARTILT
Trigger: TGTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTA...ATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTACTTCGGATTGTTTCTaGAAGCATTTTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACTSDCF*KHFQPL
Trigger: CAGAGGCTGAAAATGCTTTCAGAAACAATCCGAAGT...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR GCA 90 bp ACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGAATGCCCTTCCTTTCTTTGAACTaGTGTTACCCCACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: TWKSLESTQNKAGGIRMPFLSLN*CYPTQN
Trigger: ATTCTGGGTGGGGTAACAGCAGTTCAAAGAAAGGAA...GGGCATTCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp AAGACAGGGAAGGAGTGGCTAGAGAAGCTGATAGAAAACAGGAGAGCACAGTGCGTAACTGTCAATTACTaGTGGGACAGAGTAAGACAA +
Preference number: 4 (lower is better)
Translates to: KTGKEWLEKLIENRRAQCVTVNY*WDRVRQ
Trigger: TTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTAC...GCACTGTGCTCTCCTGTTTTCTATCAGCTTCTCTAGCCACTCCTTCCCTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR GCA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACACTCAGCGAAGAAGGCTaGAATCTGTTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTLSEEG*NLLLSW
Trigger: CCAACTCAACAACAGATTGCAGCCTTCTTCGCTGAG...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CCA 90 bp TGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCAGACATGGCAAATGTCTaGGCTCAAGTTCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: WIWQHGSPWNPHRIKLVADMANV*AQVPFF
Trigger: AAAGAAAGGAACTTGAGCCCAGACATTTGCCATGTC...TGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CCA 90 bp TGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCAGTAATACCAAGAGAATaGAAGAGATCACCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: WIWQHGSPWNPHRIKLVAVIPRE*KRSPEE
Trigger: CTCCTCAGGTGATCTCTTCCATTCTCTTGGTATTAC...TGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
3UTR CAA 72 bp TGGGACAGAGTAAGACAATGCAGCAAAGAGATTGCTTaGGATTTGGCAACATGGAAGTCCCTGGAATCCACA +
Preference number: 4 (lower is better)
Translates to: WDRVRQCSKEIA*DLATWKSLEST
Trigger: TGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATTGTCTTACTCTGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR TCA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTTGTATTTGGATGAGATaGGTTTCTTCTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: ADFICKREVRLAFSIACICIWMR*VSSGVH
Trigger: GTGTACTCCAGAAGAAACTCATCTCATCCAAATACA...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTTGTATTTGGATGAGATaGGTTTCTTCTGGAGTACAC +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACCIWMR*VSSGVH
Trigger: GTGTACTCCAGAAGAAACTCATCTCATCCAAATACA...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR TCA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTTGCCAATTAAAAGTATaGCTGGGACACTGTAAAATG +
Preference number: 4 (lower is better)
Translates to: KADFICKREVRLAFSIACCQLKV*LGHCKM
Trigger: CATTTTACAGTGTCCCAGTCATACTTTTAATTGGCA...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS TCA 90 bp GGGCGCTGGTCTGCGGCCATGGTGGGTGGCCGTCAGTCGGTGCCGTaGCGCCACGCGGAGACGTCGCCGCGCGGGCTGGGCCTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: GRWSAAMVGGRQSVP*RHAETSPRGLGLQG
Trigger: GCCTTGGAGGCCCAGCCCGCGCGGCGACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 90 bp CCTTCGGGCGCTGGTCTGCGGCCATGGTGGGTGGCCGTCAGTCGGTaGCGTGACGCCACGCGGAGACGTCGCCGCGCGGGCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSGAGLRPWWVAVSR*RDATRRRRRAGWAS
Trigger: GGAGGCCCAGCCCGCGCGGCGACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 90 bp GGCCAGCGTGTCGGCCTTCGGGCGCTGGTCTGCGGCCATGGTGGGTaGCCGTCAGTCGGTGCCGTGACGCCACGCGGAGACGTCGCCGCG +
Preference number: 5 (lower is better)
Translates to: GQRVGLRALVCGHGG*PSVGAVTPRGDVAA
Trigger: CGCGGCGACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 90 bp GAGCCGTTGCCTCAGGGCCAGCGTGTCGGCCTTCGGGCGCTGGTCTaGGGCCATGGTGGGTGGCCGTCAGTCGGTGCCGTGACGCCACGC +
Preference number: 5 (lower is better)
Translates to: EPLPQGQRVGLRALV*GHGGWPSVGAVTPR
Trigger: GCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCCCTGAGGCAACGGCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 90 bp CGGCCGGACGGGATGGGTAGCAGCGGCTTCCTAGCCGGAGGCGCGTaGGTAGTGCGTGCGTGCGTGCGTCGTGCGTGCGCGTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RPDGMGSSGFLAGGA*VVRACVRRACACLS
Trigger: GGAGAGGCACGCGCACGCACGACGCACGCACGCACGCACTACGCACGCGCCTCCGGCTAGGAAGCCGCTGCTACCCATCCCGTCCGGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 90 bp TCAGGGCCAGCGTGTCGGCCTTCGGGCGCTGGTCTGCGGCCATGGTaGGTGGCCGTCAGTCGGTGCCGTGACGCCACGCGGAGACGTCGC +
Preference number: 5 (lower is better)
Translates to: SGPACRPSGAGLRPW*VAVSRCRDATRRRR
Trigger: GCGACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCCCTGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 90 bp GCCTCAGGGCCAGCGTGTCGGCCTTCGGGCGCTGGTCTGCGGCCATaGTGGGTGGCCGTCAGTCGGTGCCGTGACGCCACGCGGAGACGT +
Preference number: 5 (lower is better)
Translates to: ASGPACRPSGAGLRP*WVAVSRCRDATRRR
Trigger: ACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCCCTGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 90 bp GCCCCGCCCCGAAGCGCCCGCGTTGCGGTGGTTCATTTCTTCGCTTaGCCACTGGGCCTGGCAGCCTTCCGGCCCGTGGTCGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: APPRSARVAVVHFFA*PLGLAAFRPVVVPW
Trigger: CCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGGGCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 90 bp GCGCCCGCGTTGCGGTGGTTCATTTCTTCGCTTGCCCACTGGGCCTaGCAGCCTTCCGGCCCGTGGTCGTGCCTTGGCAGTCCCGCGCAG +
Preference number: 5 (lower is better)
Translates to: APALRWFISSLAHWA*QPSGPWSCLGSPAQ
Trigger: CTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
CDS CCA 90 bp GCTCAGGTTCGCACTCGGCCCCGCCCCGAAGCGCCCGCGTTGCGGTaGTTCATTTCTTCGCTTGCCCACTGGGCCTGGCAGCCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: AQVRTRPRPEAPALR*FISSLAHWAWQPSG
Trigger: GCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGGGCGGGGCCGAGTGCGAACCTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS TCA 90 bp TTCAGCCCCCTCCCAGGTCACTCTCGAGCCAGGCCCAGGTGCTGCTaGCGGGCCACCCTGGGTGAGGTCCTCTCAGGCGCCAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FSPLPGHSRARPRCC*RATLGEVLSGARVK
Trigger: CTTCACCCTGGCGCCTGAGAGGACCTCACCCAGGGTGGCCCGTCAGCAGCACCTGGGCCTGGCTCGAGAGTGACCTGGGAGGGGGCTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 90 bp CCCGAAGCGCCCGCGTTGCGGTGGTTCATTTCTTCGCTTGCCCACTaGGCCTGGCAGCCTTCCGGCCCGTGGTCGTGCCTTGGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: PEAPALRWFISSLAH*AWQPSGPWSCLGSP
Trigger: GGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
CDS CCA 90 bp TTCATTTCTTCGCTTGCCCACTGGGCCTGGCAGCCTTCCGGCCCGTaGTCGTGCCTTGGCAGTCCCGCGCAGGAACTCGAGCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: FISSLAHWAWQPSGP*SCLGSPAQELERCP
Trigger: GGGGCAGCGCTCGAGTTCCTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS TCA 90 bp CACCGTCCCACCGAGGGCCCCCTCACAGGTCAAGTGTGCTGCCTGTaGACCGACTCCCCCGACTCTCCCTTGTCTGCCCTTTCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: HRPTEGPLTGQVCCL*TDSPDSPLSALSAP
Trigger: GGGGGCTGAAAGGGCAGACAAGGGAGAGTCGGGGGAGTCGGTTCACAGGCAGCACACTTGACCTGTGAGGGGGCCCTCGGTGGGACGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS GCA 90 bp GGTCCTCTCAGGCGCCAGGGTGAAGGTCTTCTCCGGAGTAAAGGCTaGCAAGCGAGGCTGACACAGCCGAACAGCGGTGAGGGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPLRRQGEGLLRSKG*QARLTQPNSGEGGA
Trigger: GGCCCCGCCCTCACCGCTGTTCGGCTGTGTCAGCCTCGCTTGGCAGCCTTTACTCCGGAGAAGACCTTCACCCTGGCGCCTGAGAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 90 bp CCATCTCCACCATACTGCCCCCGTCAGGCCTCCCCACAGCTCACTTaGGGCCTGCTGGCCACTTCACGGTCACCTGACCTCAAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PSPPYCPRQASPQLT*GLLATSRSPDLKPP
Trigger: CGGCGGCTTGAGGTCAGGTGACCGTGAAGTGGCCAGCAGGCCCCAAGTGAGCTGTGGGGAGGCCTGACGGGGGCAGTATGGTGGAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CCA 90 bp CTGCTCATGTGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACTaGAAGAGGGCCGCCTCCGTCACACGGCTGGCTCCACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LLMCCLDHERVAVPN*KRAASVTRLAPLSQ
Trigger: CTGGCTGAGTGGAGCCAGCCGTGTGACGGAGGCGGCCCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS-3UTR CAA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTGGTTCATTTCTTCGCTaGCCCACTGGGCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRGSFLR*PTGPGS
Trigger: GCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACC...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS TCA 90 bp GCCAGGGTGAAGGTCTTCTCCGGAGTAAAGGCTGCCAAGCGAGGCTaGCACAGCCGAACAGCGGTGAGGGCGGGGCCGTCTCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: ARVKVFSGVKAAKRG*HSRTAVRAGPSPEL
Trigger: CAGTTCAGGAGACGGCCCCGCCCTCACCGCTGTTCGGCTGTGTCAGCCTCGCTTGGCAGCCTTTACTCCGGAGAAGACCTTCACCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 90 bp GCGTCAGTCTCCCGGATCCTGAGAAAAGGTGGCTGCCCCGTCCCATaGGGACTCCATAAGGCCGCGTGTCTTCGATGGGATGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: ASVSRILRKGGCPVP*GLHKAACLRWDGPG
Trigger: CCCTGGCCCATCCCATCGAAGACACGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATCCGGGAGACTGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS-3UTR CAA 90 bp GCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAGTACATGTACTGCCCTaGGGCCCGGACAATCTTAAC +
Preference number: 5 (lower is better)
Translates to: ALATGWVAATQATGWPLPVHVLP*GPDNLN
Trigger: GTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTAC...TGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp AGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCGCAACAGGGTGGCCGTaGCCAATGGACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: RLGCGHAGNRVAVANGLAATGWP*PMDLPM
Trigger: CATGGGCAAGTCCATTGGCAACGGCCACCCTGTTGC...GGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTCTGCCCCCAAACGTGTaGAAGTACTCAACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRLPPNV*KYSTPV
Trigger: CACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAG...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTAGGCAGCCTCTTCAGTaGCTGGTGTCCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: QMPSPQAGLRPRRQQGGRRQPLQ*LVSLWP
Trigger: AGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCT...ACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS GCA 90 bp AGCCCAACACCCCGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: SPTPRVEVLNAGGFK*PRHRLGCGHAGNRV
Trigger: CACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGGGGTGTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494126.6
CDS CCA 90 bp CGCGTGTCTTCGATGGGATGGGCCAGGGCACCAACATTAGGTGCCTaGCTCTCAGCCCTAAACAGCTCCTTGCCAGCCACGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: RVSSMGWARAPTLGA*LSALNSSLPATWPC
Trigger: GCAGGGCCACGTGGCTGGCAAGGAGCTGTTTAGGGCTGAGAGCCAGGCACCTAATGTTGGTGCCCTGGCCCATCCCATCGAAGACACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS GCA 90 bp AGAGACAGCATCAGATCCCACAGCATGAGGGCTCAATGCCCAAGCTaGCCCACAGCCCCCTGGGCACCAGTAGCAAGTCTGGGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RDSIRSHSMRAQCPS*PTAPWAPVASLGLW
Trigger: CCAGAGGCCCAGACTTGCTACTGGTGCCCAGGGGGCTGTGGGGCAGCTTGGGCATTGAGCCCTCATGCTGTGGGATCTGATGCTGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS GCA 90 bp CTGCATGTGTCCGCGTCAGTCTCCCGGATCCTGAGAAAAGGTGGCTaGCCCGTCCCATGGGGACTCCATAAGGCCGCGTGTCTTCGATGG +
Preference number: 5 (lower is better)
Translates to: LHVSASVSRILRKGG*PVPWGLHKAACLRW
Trigger: CCATCGAAGACACGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATCCGGGAGACTGACGCGGACACATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS GCA 90 bp CTGCATGTGTCCGCGTCAGTCTCCCGGATCCTGAGAAAAGGTGGCTaGCCCGTCCCATGGGGACTCCATAAGGCCGCGTGTCTGATGAGC +
Preference number: 5 (lower is better)
Translates to: LHVSASVSRILRKGG*PVPWGLHKAACLMS
Trigger: GCTCATCAGACACGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATCCGGGAGACTGACGCGGACACATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp CCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACATCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PPNVLKYSTPVASNALATSPQAG*RPRRQQ
Trigger: CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGA...TGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 5 (lower is better)
Translates to: ALATGWVAATQATGWPLPRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...TGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CGGTGGCTTCAAATGCCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGCAACAGGCCTCTGTGGCCTCCTaGCTCATTTCTGCATGTGTC +
Preference number: 5 (lower is better)
Translates to: RWLQMPSPQAGLRPRRQQASVAS*LISACV
Trigger: GACACATGCAGAAATGAGCAAGGAGGCCACAGAGGC...CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp GCCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGTGTCTGATGAGCCGTaGCCTCAGGGCCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: ARGAASGSCLHWWHDPGAVSDEP*PQGQRV
Trigger: GACACGCTGGCCCTGAGGCAACGGCTCATCAGACAC...AGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS TCA 90 bp CTCCCCACAGCTCACTTGGGGCCTGCTGGCCACTTCACGGTCACCTaGCCTCAAGCCGCCGCATTCCAATCCATCCTCCACATAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LPTAHLGPAGHFTVT*PQAAAFQSILHIAL
Trigger: AAGGGCTATGTGGAGGATGGATTGGAATGCGGCGGCTTGAGGTCAGGTGACCGTGAAGTGGCCAGCAGGCCCCAAGTGAGCTGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS GCA 90 bp CCAAGACATTCAGGACGGCCAGCCCCACAGCGCAGGACACTGGGCTaGCCCCAAACTGAGCCAGGGACAAAGAACATGTCAGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: PRHSGRPAPQRRTLG*PQTEPGTKNMSDAL
Trigger: CAGGGCATCTGACATGTTCTTTGTCCCTGGCTCAGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTGGGGCTGGCCGTCCTGAATGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS GCA 90 bp CAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTGGCAGTGCCCAACTGGAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QVPAVGVEHLVLLMC*LDHERVAVPNWKRA
Trigger: GGCCCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS CCA 90 bp TACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTTaGACCACGAGAGGGTGGCAGTGCCCAACTGGAAGAGGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: YRLLVLSTWFCSCAA*TTRGWQCPTGRGPP
Trigger: AGGCGGCCCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS-3UTR CAA 90 bp AGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGCCCGTGGTCGTGCCTaGGCAGTCCCGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SCLHWWHDPGAAPSPRHSARGRA*AVPRRN
Trigger: GTTCCTGCGCGGGACTGCCAAGGCACGACCACGGGC...TGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp GTCCCGTGTAGTGGCGAGCCAGCCTCAGGGCCAGGTCATTGGCTTCTGACCTCATGCAGGTACCGGCTGTaGGTGTTGAGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VPCSGEPASGPGHWLLTSCRYRL*VLSTWF
Trigger: GAACCAGGTGCTCAACACCAACAGCCGGTACCTGCA...TGAGGTCAGAAGCCAATGACCTGGCCCTGAGGCTGGCTCGCCACTACACGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp GGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCCAGCCCCACAAGGCCCAGAAGTGCTaGCCTACCCGGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GMILELLLLQDIQDGQPHKAQKC*PTRPKP
Trigger: TGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTT...GTGGGGCTGGCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCGGGATGTTTGATTTTTaGCTGCCCGAGGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: GWVAATQATGWPLPMDLPGMFDF*LPEELH
Trigger: ATGCAGCTCCTCGGGCAGCAAAAAATCAAACATCCC...GGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GGCTGGGTTGCGGCCACGCAGGCAACAGGGTGGCCGTTGCCAATGGACTTGCCCCAATCTGTTGTTGAGTaGGGCAGTGCATACCACGTG +
Preference number: 5 (lower is better)
Translates to: GWVAATQATGWPLPMDLPQSVVE*GSAYHV
Trigger: CACGTGGTATGCACTGCCCAACTCAACAACAGATTG...GGGCAAGTCCATTGGCAACGGCCACCCTGTTGCCTGCGTGGCCGCAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS TCA 90 bp CAGCGCCATGTTATCCGGGCTTGGGGACAGGCACCGACCTGTTGTTaGGTTGGGCAGTGCATACCACGTGGACCCACTCCTTCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QRHVIRAWGQAPTCC*VGQCIPRGPTPSGH
Trigger: ATGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS TCA 90 bp GGACCCACTCCTTCTGGCCATCCAGGTTGCGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCAGGTGGCCGTGATACGCACGTGCGC +
Preference number: 5 (lower is better)
Translates to: GPTPSGHPGCGTCRD*CQSGSSGGRDTHVR
Trigger: GCGCACGTGCGTATCACGGCCACCTGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS CCA 90 bp CCATGTTATCCGGGCTTGGGGACAGGCACCGACCTGTTGTTGAGTTaGGCAGTGCATACCACGTGGACCCACTCCTTCTGGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PCYPGLGTGTDLLLS*AVHTTWTHSFWPSR
Trigger: CCTGGATGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS-3UTR CAA 90 bp TGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATGATCTGCCCTCCCACACTGGGTGCAGGTACCGGCTGTaGGTGTTGAGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: CHLGEVASRGNDLPSHTGCRYRL*VLSTWF
Trigger: GAACCAGGTGCTCAACACCAACAGCCGGTACCTGCA...CCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGGAATGGCATCCAGCTTaGCCACCACCTGCCGTGCAT +
Preference number: 5 (lower is better)
Translates to: PEELHQEAAYTGGMILELEWHPA*PPPAVH
Trigger: ATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTC...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS TCA 90 bp GGACCCACTCCTTCTGGCCATCCAGGTTGCGGAACTTGTAGGGACTaGTGTCAATCAGGGAGCTCAGGTGGCCGTGATACGCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: GPTPSGHPGCGTCRD*CQSGSSGGRDTHWG
Trigger: TCCCCAGTGCGTATCACGGCCACCTGAGCTCCCTGATTGACATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS GCA 90 bp CAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTGGCAGTGCCCAACTTGTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: QVPAVGVEHLVLLMC*LDHERVAVPNLSLH
Trigger: GTGGAGAGACAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS GCA 90 bp ATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTaGTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: MQVPAVGVEHLVLLM*CLDHERVAVPNWKR
Trigger: CCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS GCA 90 bp GGATTGGACAGGCGCGGACACGGTTACCTTCCTGCCCTTCTCCTGTaGACTGCTGACCACACGTTTCACCTCGTTGGCATAGGCCATAGC +
Preference number: 5 (lower is better)
Translates to: GLDRRGHGYLPALLL*TADHTFHLVGIGHS
Trigger: GCTATGGCCTATGCCAACGAGGTGAAACGTGTGGTCAGCAGTGCACAGGAGAAGGGCAGGAAGGTAACCGTGTCCGCGCCTGTCCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514424.5
CDS CCA 90 bp CTTCTCCAAGACATTCAGGACGGCCAGCCCCACAGCGCAGGACACTaGGCTGCCCCCAAACTGAGCCAGGGACAAAGAACATGTCAGATG +
Preference number: 5 (lower is better)
Translates to: LLQDIQDGQPHSAGH*AAPKLSQGQRTCQM
Trigger: CATCTGACATGTTCTTTGTCCCTGGCTCAGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTGGGGCTGGCCGTCCTGAATGTCTTGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS-3UTR CAA 90 bp GGCTGGCTTAGGGCTGGAGCCTCAGCGTTTCACAACTTCTCACCTTCTCTTCCATGCCTGGGTCGGGATTaGGGGCTCAGGTTCGCACTC +
Preference number: 5 (lower is better)
Translates to: GWLRAGASAFHNFSPSLPCLGRD*GLRFAL
Trigger: GAGTGCGAACCTGAGCCCCAAATCCCGACCCAGGCA...TGGAAGAGAAGGTGAGAAGTTGTGAAACGCTGAGGCTCCAGCCCTAAGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp TGGGCTGCCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WAAPKRVEVLNAGGFKCPLLMCC*DHERVA
Trigger: TGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAG...AGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp AGCTGGTGGCATAAGAATGCCCCTCCTCCACCACCACTGAGGAAGCACCAGCTCTGCAGGTACCGGCTGTaGGTGTTGAGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SWWHKNAPPPPPLRKHQLCRYRL*VLSTWF
Trigger: GAACCAGGTGCTCAACACCAACAGCCGGTACCTGCA...GAGCTGGTGCTTCCTCAGTGGTGGTGGAGGAGGGGCATTCTTATGCCACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp GCCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGGCCCAGAAGTGCTaGCCTACCCGGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: AQKCLPTRPKPTWISSATKAQKC*PTRPKP
Trigger: TGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTT...TGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp CTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCTCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: LIFDQIHTNEEPNTPDIPSPQAG*RPRRQQ
Trigger: CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGA...GGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS TCA 90 bp CTGGATCTCATTCTGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: LDLILPLGRSSQQGE*SALPHWAETQRRRL
Trigger: CAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAGAATGAGATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS GCA 90 bp ATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTaGTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: MQVPAVGVEHLVLLM*CLDHERVAVPNLSL
Trigger: GAGAGACAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS GCA 90 bp TATCTACCTAGAGACAGCATCAGATCCCACAGCATGAGGGCTCAATaGCCAAGCTGCCCCACAGCCCCCTGGGCACCAGTAGCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: YLPRDSIRSHSMRAQ*PSCPTAPWAPVASL
Trigger: CAGACTTGCTACTGGTGCCCAGGGGGCTGTGGGGCAGCTTGGGCATTGAGCCCTCATGCTGTGGGATCTGATGCTGTCTCTAGGTAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS GCA 90 bp CAGGGACGAAGTCTTTTCCCTGGAGCTGGAAGGCCCAGAAGTGCTTaGCTACCCGGCCAAAGCCAACCTGGATCTCATTCTGCCACTTGG +
Preference number: 5 (lower is better)
Translates to: QGRSLFPGAGRPRSA*LPGQSQPGSHSATW
Trigger: CCAAGTGGCAGAATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS GCA 90 bp AGGCTCCCCTGGTCGGGTTCTGCTAACCTTTCTGGCCCCACAGGCTaGCTTTCTTTGTCGTACCTCCTGTGTCTGGCTCTGTCACTCCTT +
Preference number: 5 (lower is better)
Translates to: RLPWSGSANLSGPTG*LSLSYLLCLALSLL
Trigger: AAGGAGTGACAGAGCCAGACACAGGAGGTACGACAAAGAAAGGCAGCCTGTGGGGCCAGAAAGGTTAGCAGAACCCGACCAGGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CCA 90 bp TACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTTaGACCACGAGAGGGTGGCAGTGCCCAACTTGTCTCTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: YRLLVLSTWFCSCAA*TTRGWQCPTCLSTP
Trigger: TGGAGTGGAGAGACAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS-3UTR CAA 90 bp CTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCCGAAGCGCCCGCGTaGCGGTGGTTCATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: LPCQSEWHPALPPPAVHCPEAPA*RWFISS
Trigger: CGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGG...ACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTTGCCTGGGTCGGGATTaGGGGCTCAGGTTCGCACTC +
Preference number: 5 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPCLGRD*GLRFAL
Trigger: GAGTGCGAACCTGAGCCCCAAATCCCGACCCAGGCA...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTTGCCTGGGTCGGGATTaGGGGCTCAGGTTCGCACTC +
Preference number: 5 (lower is better)
Translates to: LPCQSEWHPALPPPAVHCCLGRD*GLRFAL
Trigger: GAGTGCGAACCTGAGCCCCAAATCCCGACCCAGGCA...ACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp ATGGTGACGATGTCAGGGACGAAGTCTTTTCCCTGGAGTCTGCCACTTGGGAGAAGAGCTGATGAGCCGTaGCCTCAGGGCCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: MVTMSGTKSFPWSLPLGRRADEP*PQGQRV
Trigger: GACACGCTGGCCCTGAGGCAACGGCTCATCAGCTCT...TCTCCCAAGTGGCAGACTCCAGGGAAAAGACTTCGTCCCTGACATCGTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: TEEAPAPFSFQRLQLLTWLLMCC*DHERVA
Trigger: TGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAG...CCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp CAGGACACTGGGCTGCCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCATACCGGCTGTTGGTGTaGAGCACCTGGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QDTGLPPNVLKYSTPVASYRLLV*STWFCS
Trigger: TGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA...TGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAGCCCAGTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp TTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCCTCCGGATGTGCTCTGCCACTaGGGAGAAGTAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LPTRPKPTWISSATKTPPDVLCH*GEVASR
Trigger: CCTGCTGGCTACTTCTCCCAAGTGGCAGAGCACATC...CGGAGGGGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp CAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGAAGACCCCTCCGGCCTaGCGGATGTGCTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: QKCLPTRPKPTWISSATKKTPPA*RMCSAT
Trigger: AGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTT...CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAAGGCCCAGAAGTGCTaGCCTACCCGGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQKAQKC*PTRPKP
Trigger: TGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTT...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp TGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCCAGCCCCACCGTTGCCAATGGACTaGCCCATGGTGACGATGTCA +
Preference number: 5 (lower is better)
Translates to: WHDPGAAPSPRHSGRPAPPLPMD*PMVTMS
Trigger: TGACATCGTCACCATGGGCAAGTCCATTGGCAACGG...TGGGGCTGGCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGCAACAGGGTGGCCGTaGCCAATGGACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWATGWP*PMDLPM
Trigger: CATGGGCAAGTCCATTGGCAACGGCCACCCTGTTGC...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACATCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: GVLVASSLIRSTPMKSPTSPQAG*RPRRQQ
Trigger: CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGA...TGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GCTTGCCGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGGCAGCCTCTTCAGTaGCTGGTGTCCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ACRGCLLLMVRNPLCIFKRQPLQ*LVSLWP
Trigger: AGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCT...CTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CAA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCGCACGTGCGCCACATaGCTGATGCAATCGATGTAT +
Preference number: 5 (lower is better)
Translates to: PEELHQEAAYTGGMILELRTCAT*LMQSMY
Trigger: ATACATCGATTGCATCAGCAATGTGGCGCACGTGCG...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp TCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTGCCTCCGTCACTGTTGTTGAGTaGGGCAGTGCATACCACGTG +
Preference number: 5 (lower is better)
Translates to: SALPHWAETQRRRLQSASVTVVE*GSAYHV
Trigger: CACGTGGTATGCACTGCCCAACTCAACAACAGTGAC...GGAGGCAGATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS GCA 90 bp ATGTTGTCATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTCTaGTCATGTGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACT +
Preference number: 5 (lower is better)
Translates to: MLSCRYRLLVLSTWF*SCAAWTTRGWQCPT
Trigger: AGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323594.8
ENST00000494126.6
ENST00000506001.1
ENST00000510991.5
CDS GCA 90 bp ATGTCAGGGACGAAGTCTTTTCCCTGGAGCTGGAAGGCCCAGAAGTaGTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: MSGTKSFPWSWKAQK*LPTRPKPTWISFCH
Trigger: GTGGCAGAATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS-3UTR CAA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTCCCGAAGCGCCCGCGTaGCGGTGGTTCATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGPEAPA*RWFISS
Trigger: CGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGG...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CCACCACCACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTGTACATGTACTGCCCTaGGGCCCGGACAATCTTAAC +
Preference number: 5 (lower is better)
Translates to: PPPLRKHQLPSLSRGSSSVHVLP*GPDNLN
Trigger: GTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTAC...AGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGTGGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGATGTGCTCTGCCACTaGGGAGAAGTAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWDVLCH*GEVASR
Trigger: CCTGCTGGCTACTTCTCCCAAGTGGCAGAGCACATC...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAGATGTGCTCTGCCACTaGGGAGAAGTAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQDVLCH*GEVASR
Trigger: CCTGCTGGCTACTTCTCCCAAGTGGCAGAGCACATC...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp TTGTCTCTCCACTCCACAGGTGGTTGCAAAGCAGGAAGCAGATGGGGTAACAAGAAGACCCCTCCGGCCTaGCGGATGTGCTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LSLHSTGGCKAGSRWGNKKTPPA*RMCSAT
Trigger: AGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTT...CTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp CCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATGCCCTCGCCACACCGTTGCCAATGGACTaGCCCATGGTGACGATGTCA +
Preference number: 5 (lower is better)
Translates to: PPNVLKYSTPVASNALATPLPMD*PMVTMS
Trigger: TGACATCGTCACCATGGGCAAGTCCATTGGCAACGG...TGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CTGAAGCACATTGGGGGCTTAAACTTCAGGATGTTCCTCCCAGGGCCATCAGTGGCAACAGGGTGGCCGTaGCCAATGGACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: LKHIGGLNFRMFLPGPSVATGWP*PMDLPM
Trigger: CATGGGCAAGTCCATTGGCAACGGCCACCCTGTTGC...CACTGATGGCCCTGGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTTCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: KADFICKREVRLAFSIACSPQAG*RPRRQQ
Trigger: CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGA...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGAGGCAGCCTCTTCAGTaGCTGGTGTCCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWRQPLQ*LVSLWP
Trigger: AGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCT...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CCCGAGGAGCTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGAGTTCTCCTTCAGCCTaGATACCAAGTAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PEELHQEAAYTGGMILELSSPSA*IPSRQP
Trigger: AGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACT...CAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAGCTCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CCCCACAGCGCAGGACACTGGGCTGCCCCCAAACGTGTTGAAGTACTCAACGCCTGGACAGAAAGGAAATaGACTGACTTGAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: PHSAGHWAAPKRVEVLNAWTERK*TDLRGC
Trigger: GCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCA...GGCGTTGAGTACTTCAACACGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS GCA 90 bp GAGAGGGTGGCAGTGCCCAACTTGTCTCTCCACTCCACAGGTGGTTaGAAAGCAGGAAGCAGATGGGGTAACAAGTCGCTGAAACTTCGG +
Preference number: 5 (lower is better)
Translates to: ERVAVPNLSLHSTGG*KAGSRWGNKSLKLR
Trigger: CCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGAGACAAGTTGGGCACTGCCACCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS GCA 90 bp GAGATGCATAGGGTGAGGTATGAAGGAAGGGCATGGAGCTTCCTGTaGCCTCCCTGGGCGCACCACCCTTCTAGAACCTCTGTATGTTCA +
Preference number: 5 (lower is better)
Translates to: EMHRVRYEGRAWSFL*PPWAHHPSRTSVCS
Trigger: TGAACATACAGAGGTTCTAGAAGGGTGGTGCGCCCAGGGAGGGCACAGGAAGCTCCATGCCCTTCCTTCATACCTCACCCTATGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS CCA 90 bp CCAACCATATTCTGCCTTACAGGTGGGAGGGCAGGGCCAATGGGATaGGATACTGGTCCCCCACACCTGTTGCAATCAGAGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: PTIFCLTGGRAGPMG*DTGPPHLLQSEQSP
Trigger: AGGAGATTGCTCTGATTGCAACAGGTGTGGGGGACCAGTATCCCATCCCATTGGCCCTGCCCTCCCACCTGTAAGGCAGAATATGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CCA 90 bp AGGGTGAGGTATGAAGGAAGGGCATGGAGCTTCCTGTGCCCTCCCTaGGCGCACCACCCTTCTAGAACCTCTGTATGTTCAGTTATCTGG +
Preference number: 5 (lower is better)
Translates to: RVRYEGRAWSFLCPP*AHHPSRTSVCSVIW
Trigger: CCAGATAACTGAACATACAGAGGTTCTAGAAGGGTGGTGCGCCCAGGGAGGGCACAGGAAGCTCCATGCCCTTCCTTCATACCTCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS-3UTR CAA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACAGCCCGTGGTCGTGCCTaGGCAGTCCCGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTARGRA*AVPRRN
Trigger: GTTCCTGCGCGGGACTGCCAAGGCACGACCACGGGC...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR CAA 90 bp ATAGTCCACGATGTTGTCATGCAGGTACCGGCTGTTGGTGTTGAGCACCTGGTTGGTTCATTTCTTCGCTaGCCCACTGGGCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: IVHDVVMQVPAVGVEHLVGSFLR*PTGPGS
Trigger: GCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACC...AACCAGGTGCTCAACACCAACAGCCGGTACCTGCATGACAACATCGTGGACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp CCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGCAAATGTCTGGGTACCGGCTGTTGGTGTaGAGCACCTGGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PAPFSFQRLQLLTWQMSGYRLLV*STWFCS
Trigger: TGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA...CCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGCCGTTGCCAATGGACTaGCCCATGGTGACGATGTCA +
Preference number: 5 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWPLPMD*PMVTMS
Trigger: TGACATCGTCACCATGGGCAAGTCCATTGGCAACGG...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTGCAACAGGGTGGCCGTaGCCAATGGACTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGATGWP*PMDLPM
Trigger: CATGGGCAAGTCCATTGGCAACGGCCACCCTGTTGC...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGTCGCCACAGGCTGGGTaGCGGCCACGCAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVSPQAG*RPRRQQ
Trigger: CTGTTGCCTGCGTGGCCGCAACCCAGCCTGTGGCGA...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAACTGCCCCCAAACGTGTaGAAGTACTCAACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PEVLAYPAKANLDLICNKLPPNV*KYSTPV
Trigger: CACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAG...TTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp CAGGACACTGGGCTGCCCCCAAACGTGTTGAAGTACTCAACGCCGGTGGCTTCAAGTTCTCCTTCAGCCTaGATACCAAGTAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QDTGLPPNVLKYSTPVASSSPSA*IPSRQP
Trigger: AGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACT...TGAAGCCACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAGCCCAGTGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGACCACCTGCCGTGCATaGTCCAGGCTGAAGCACATT +
Preference number: 5 (lower is better)
Translates to: GCRHLGYSNRPVVRRRGWTTCRA*SRLKHI
Trigger: AATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGT...CCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CAA 90 bp TCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTTCACCTGGAGTCTGCCACTaGGGAGAAGTAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGCSSQGHQCSAKRSSPSPGVCH*GEVASR
Trigger: CCTGCTGGCTACTTCTCCCAAGTGGCAGACTCCAGG...TGAAGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp CTGCATCAGGAAGCTGCCTACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCATCTCATTCTGCCACTaGGGAGAAGTAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHQEAAYTGGMILELLLLISFCH*GEVASR
Trigger: CCTGCTGGCTACTTCTCCCAAGTGGCAGAATGAGAT...GAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTAGGCAGCTTCCTGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS CCA 90 bp GATACAGATAAAGAGATGCATAGGGTGAGGTATGAAGGAAGGGCATaGAGCTTCCTGTGCCCTCCCTGGGCGCACCACCCTTCTAGAACC +
Preference number: 5 (lower is better)
Translates to: DTDKEMHRVRYEGRA*SFLCPPWAHHPSRT
Trigger: GGTTCTAGAAGGGTGGTGCGCCCAGGGAGGGCACAGGAAGCTCCATGCCCTTCCTTCATACCTCACCCTATGCATCTCTTTATCTGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS-3UTR CAA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTCCCGAAGCGCCCGCGTaGCGGTGGTTCATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: KADFICKREVRLAFSIACPEAPA*RWFISS
Trigger: CGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGG...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAAGAGCTGATGAGCCGTaGCCTCAGGGCCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: PLKADFICKREVRLAFSIRADEP*PQGQRV
Trigger: GACACGCTGGCCCTGAGGCAACGGCTCATCAGCTCT...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000474052.5
CDS-3UTR CAA 90 bp TACACTGGTGGCATGATCCTGGAGCTGCTCCTTCTCCAAGACATTCAGGACGGCGTACATGTACTGCCCTaGGGCCCGGACAATCTTAAC +
Preference number: 5 (lower is better)
Translates to: YTGGMILELLLLQDIQDGVHVLP*GPDNLN
Trigger: GTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTAC...GCCGTCCTGAATGTCTTGGAGAAGGAGCAGCTCCAGGATCATGCCACCAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GGTTATTCCAACAGACCAGTGGTTAGGAGGAGGGGGTGGGTAGCATTATGGCCTTACCGGCTGTTGGTGTaGAGCACCTGGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GYSNRPVVRRRGWVALWPYRLLV*STWFCS
Trigger: TGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA...AGGCCATAATGCTACCCACCCCCTCCTCCTAACCACTGGTCTGTTGGAATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp CAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGCTCAGGGCCAGGTCATaGGCTTCTGACCCAGAATTC +
Preference number: 5 (lower is better)
Translates to: QKCLPTRPKPTWISSATKLRARS*ASDPEF
Trigger: GAATTCTGGGTCAGAAGCCAATGACCTGGCCCTGAG...CTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAAGACCCCTCCGGCCTaGCGGATGTGCTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVKTPPA*RMCSAT
Trigger: AGTGGCAGAGCACATCCGCAAGGCCGGAGGGGTCTT...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGTAAGCCGTTGCCAATGGACTaGCCCATGGTGACGATGTCA +
Preference number: 5 (lower is better)
Translates to: RGCLLLMVRNPLCIFKSKPLPMD*PMVTMS
Trigger: TGACATCGTCACCATGGGCAAGTCCATTGGCAACGG...CTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CAA 90 bp CCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGGGTCTGCCCCCAAACGTGTaGAAGTACTCAACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PQWTERKLTDLRGCRHLGLPPNV*KYSTPV
Trigger: CACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAG...ACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGCTGCCCCCAAACGTGTaGAAGTACTCAACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRLPPNV*KYSTPV
Trigger: CACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAG...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GCATCCAGCTTTGCCACCACCTGCCGTGCATTGTCCAGGCTGAAGCACATTGGGCTTGTGGCCTCATCTTaGATCAGATCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: ASSFATTCRALSRLKHIGLVASS*IRSTPM
Trigger: CATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG...CCCAATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGTGGCAAAGCTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGGCAGCCTCTTCAGTaGCTGGTGTCCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRRQPLQ*LVSLWP
Trigger: AGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCT...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGTAAGACCACCTGCCGTGCATaGTCCAGGCTGAAGCACATT +
Preference number: 5 (lower is better)
Translates to: RGCLLLMVRNPLCIFKSKTTCRA*SRLKHI
Trigger: AATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGT...CTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CAA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGGAATGGCATCCAGCTTaGCCACCACCTGCCGTGCAT +
Preference number: 5 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRREWHPA*PPPAVH
Trigger: ATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTC...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CAA 90 bp ACTTCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTGAATGGCATCCAGCTTaGCCACCACCTGCCGTGCAT +
Preference number: 5 (lower is better)
Translates to: TSGCSSQGHQCSAKRSSPEWHPA*PPPAVH
Trigger: ATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTC...AGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GGAATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCCTGAGCATGTCACTGTaGTTGAGTTGGGCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: GMICPPTLGRDSAKKAAILSMSL*LSWAVH
Trigger: ATGCACTGCCCAACTCAACAACAGTGACATGCTCAG...GATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CAA 90 bp GGAATGATCTGCCCTCCCACACTGGGCAGAGACTCAGCGAAGAAGGCTGCAATCTTGCCTGTTTCTTCCTaGGACTCCTGCAGAGGTCTT +
Preference number: 5 (lower is better)
Translates to: GMICPPTLGRDSAKKAAILPVSS*DSCRGL
Trigger: AAGACCTCTGCAGGAGTCCAAGGAAGAAACAGGCAA...GATTGCAGCCTTCTTCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS GCA 90 bp AACCTCCCTCGCAGTGAAGTTGCAGAACATTTTCATCACTTCCTGTaGAACCGTCCCGCTACTACTGGACCCAGGCATCCACTGATCTGC +
Preference number: 5 (lower is better)
Translates to: NLPRSEVAEHFHHFL*NRPATTGPRHPLIC
Trigger: GCAGATCAGTGGATGCCTGGGTCCAGTAGTAGCGGGACGGTTGCACAGGAAGTGATGAAAATGTTCTGCAACTTCACTGCGAGGGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 90 bp AATGGGATTCTTTACACACTAGGGCAGTGCCAGGGCCGTCTGAATTaGGGCACAATAGTGCTCCTCCTGGCTGGTGAAGAAAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: NGILYTLGQCQGRLN*GTIVLLLAGEEKPA
Trigger: AGCAGGCTTTTCTTCACCAGCCAGGAGGAGCACTATTGTGCCCCAATTCAGACGGCCCTGGCACTGCCCTAGTGTGTAAAGAATCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS-3UTR CAA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATGGCCAACGTGCGCCACATaGCTGATGCAATCGATGTAT +
Preference number: 5 (lower is better)
Translates to: TEEAPAPFSFQRLQLLTWPTCAT*LMQSMY
Trigger: ATACATCGATTGCATCAGCAATGTGGCGCACGTTGG...CCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVLLMCC*DHERVA
Trigger: TGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAG...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGATACCGGCTGTTGGTGTaGAGCACCTGGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRYRLLV*STWFCS
Trigger: TGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTA...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493197.5
ENST00000510913.5
CDS-3UTR CAA 90 bp CACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGGGATGCAGACATCTGCTCAGGGCCAGGTCATaGGCTTCTGACCCAGAATTC +
Preference number: 5 (lower is better)
Translates to: HPQWTERKLTDLRGCRHLLRARS*ASDPEF
Trigger: GAATTCTGGGTCAGAAGCCAATGACCTGGCCCTGAG...CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS-3UTR CAA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTAAGGCCCAGAAGTGCTaGCCTACCCGGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: KADFICKREVRLAFSIACKAQKC*PTRPKP
Trigger: TGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTT...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp CTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACATCCCCCCGTTGCCAATGGACTaGCCCATGGTGACGATGTCA +
Preference number: 5 (lower is better)
Translates to: LIFDQIHTNEEPNTPDIPPLPMD*PMVTMS
Trigger: TGACATCGTCACCATGGGCAAGTCCATTGGCAACGG...GGGGATGTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CACGTGGACCCACTCCTTCTGGCCATCCAGGTTGCGGAACTTGTAGGGACTGATCTTGTGGCCTCATCTTaGATCAGATCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: HVDPLLLAIQVAELVGTDLVASS*IRSTPM
Trigger: CATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG...ATCAGTCCCTACAAGTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp TGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCAGGCAGCCTCTTCAGTaGCTGGTGTCCTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: CPCGLIFDQIHTNEEPNTRQPLQ*LVSLWP
Trigger: AGGCCACAAGGACACCAGCAACTGAAGAGGCTGCCT...GGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474052.5
ENST00000493197.5
ENST00000506045.1
CDS-3UTR CAA 90 bp TGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACACCCCTGACACCACCTGCCGTGCATaGTCCAGGCTGAAGCACATT +
Preference number: 5 (lower is better)
Translates to: CGLIFDQIHTNEEPNTPDTTCRA*SRLKHI
Trigger: AATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGT...GTCAGGGGTGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp TTGTCTCTCCACTCCACAGGTGGTTGCAAAGCAGGAAGCAGATGGGGTAACAAGCTCAGGGCCAGGTCATaGGCTTCTGACCTCACTAAG +
Preference number: 5 (lower is better)
Translates to: LSLHSTGGCKAGSRWGNKLRARS*ASDLTK
Trigger: CTTAGTGAGGTCAGAAGCCAATGACCTGGCCCTGAG...CTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS-3UTR CAA 90 bp CCCAGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGCATGTCACTGTTGTaGAGTTGGGCAGTGCATACC +
Preference number: 5 (lower is better)
Translates to: PRSACLPGQSQPGSHLQQSMSLL*SWAVHT
Trigger: GGTATGCACTGCCCAACTCAACAACAGTGACATGCT...TTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS-3UTR CAA 90 bp AAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACCCTGCCTCCTGCAGATTaGCCTGTTTCTTCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KCLPTRPKPTWISSATKTLPPAD*PVSSLD
Trigger: GTCCAAGGAAGAAACAGGCAAATCTGCAGGAGGCAG...GGTCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS TCA 90 bp ACTTCCTGTGCAACCGTCCCGCTACTACTGGACCCAGGCATCCACTaGTCTGCTTTCTGTTACTATGAGATGGCTACAGGGGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: TSCATVPLLLDPGIH*SAFCYYEMATGGFE
Trigger: TTCAAAGCCCCCTGTAGCCATCTCATAGTAACAGAAAGCAGATCAGTGGATGCCTGGGTCCAGTAGTAGCGGGACGGTTGCACAGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS TCA 90 bp CCCCTCCTGGGACACCTTGGAACACCAACCTTCTTGGCTGATGAATaGAAAAATGGGATTCTTTACACACTAGGGCAGTGCCAGGGCCGT +
Preference number: 5 (lower is better)
Translates to: PLLGHLGTPTFLADE*KNGILYTLGQCQGR
Trigger: ACGGCCCTGGCACTGCCCTAGTGTGTAAAGAATCCCATTTTTTCATTCATCAGCCAAGAAGGTTGGTGTTCCAAGGTGTCCCAGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 90 bp TACTGGACCCAGGCATCCACTGATCTGCTTTCTGTTACTATGAGATaGCTACAGGGGGCTTTGAAAGGCTGTGACGTACTCCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: YWTQASTDLLSVTMR*LQGALKGCDVLLGV
Trigger: GACTCCCAGGAGTACGTCACAGCCTTTCAAAGCCCCCTGTAGCCATCTCATAGTAACAGAAAGCAGATCAGTGGATGCCTGGGTCCAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 90 bp ATTGGAGCCCAACTCCAGGTCTGGTATTTAGGGCATAAGACTAGGTaGTTACAAGAGGCAAGGGTGGGTTGGGGTTCCACGTGGATACAG +
Preference number: 5 (lower is better)
Translates to: IGAQLQVWYLGHKTR*LQEARVGWGSTWIQ
Trigger: CTGTATCCACGTGGAACCCCAACCCACCCTTGCCTCTTGTAACCACCTAGTCTTATGCCCTAAATACCAGACCTGGAGTTGGGCTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS-3UTR CAA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTTGCAGGTACCGGCTGTaGGTGTTGAGCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KADFICKREVRLAFSIACCRYRL*VLSTWF
Trigger: GAACCAGGTGCTCAACACCAACAGCCGGTACCTGCA...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp GCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTATTCTGCCCCCAAACGTGTaGAAGTACTCAACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: ADFICKREVRLAFSIACILPPNV*KYSTPV
Trigger: CACCGGCGTTGAGTACTTCAACACGTTTGGGGGCAG...AATACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp TCTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGGGGATGTTTGATTTTTaGCTGCCCGAGGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: SSMSVRMASSFATTCRALGMFDF*LPEELH
Trigger: ATGCAGCTCCTCGGGCAGCAAAAAATCAAACATCCC...CAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGAATGGCATCCAGCTTaGCCACCACCTGCCGTGCAT +
Preference number: 5 (lower is better)
Translates to: PLKADFICKREVRLAFSIEWHPA*PPPAVH
Trigger: ATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTC...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS TCA 90 bp CAGAAGAGATGTAGTTCTAGAGGGAGAGGTAGAAAGAGGGCAGTCTaGAGGCAGAGCAGGGAGAGAGAAGCTGGTTCTGGAAAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: QKRCSSRGRGRKRAV*RQSREREAGSGKAD
Trigger: ATCTGCCTTTCCAGAACCAGCTTCTCTCTCCCTGCTCTGCCTTCAGACTGCCCTCTTTCTACCTCTCCCTCTAGAACTACATCTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS CCA 90 bp TGGCAGGGGATGTTTATTGGCTGGATTGGAGCCCAACTCCAGGTCTaGTATTTAGGGCATAAGACTAGGTGGTTACAAGAGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: WQGMFIGWIGAQLQV*YLGHKTRWLQEARV
Trigger: CACCCTTGCCTCTTGTAACCACCTAGTCTTATGCCCTAAATACCAGACCTGGAGTTGGGCTCCAATCCAGCCAATAAACATCCCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS-3UTR CAA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACAGGTTCATTTCTTCGCTaGCCCACTGGGCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTGSFLR*PTGPGS
Trigger: GCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACC...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GTGGTAACTGTCAATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTAGAGCTGATGAGCCGTaGCCTCAGGGCCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: VVTVNYCWDRVRQCSKEIRADEP*PQGQRV
Trigger: GACACGCTGGCCCTGAGGCAACGGCTCATCAGCTCT...AATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGGGGATGTTTGATTTTTaGCTGCCCGAGGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRGMFDF*LPEELH
Trigger: ATGCAGCTCCTCGGGCAGCAAAAAATCAAACATCCC...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp GACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGGAGGAGTTCTCCTTCAGCCTaGATACCAAGTAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: DLRGCRHLGYSNRPVVRRSSPSA*IPSRQP
Trigger: AGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACT...CCTCCTAACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CAA 90 bp CATCAGTGCTCAGCAAAACGTAGTTCTCCTTCAGCCTTGATACCAAGTAGGCAGACCACCTGCCGTGCATaGTCCAGGCTGAAGCACATT +
Preference number: 5 (lower is better)
Translates to: HQCSAKRSSPSALIPSRQTTCRA*SRLKHI
Trigger: AATGTGCTTCAGCCTGGACAATGCACGGCAGGTGGT...CTGCCTACTTGGTATCAAGGCTGAAGGAGAACTACGTTTTGCTGAGCACTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp CACCCTACCCCATTCCACCCCCAGTGGACAGAAAGGAAATTGACTGACTTGAGGAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 5 (lower is better)
Translates to: HPTPFHPQWTERKLTDLRRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...CCTCAAGTCAGTCAATTTCCTTTCTGTCCACTGGGGGTGGAATGGGGTAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp CGAGGCTGCTTGCTGCTGATGGTAAGGAACCCGCTGTGCATCTTCAAGAGTAAGAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 5 (lower is better)
Translates to: RGCLLLMVRNPLCIFKSKRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...CTTACTCTTGAAGATGCACAGCGGGTTCCTTACCATCAGCAGCAAGCAGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CAA 90 bp CTTCCATGTCAGTCAGAATGGCATCCAGCTTTGCCACCACCTGCCGTGCATTGTAGGAAATTGACTGACTaGAGGGGATGCAGACATCTG +
Preference number: 5 (lower is better)
Translates to: LPCQSEWHPALPPPAVHCRKLTD*RGCRHL
Trigger: CAGATGTCTGCATCCCCTCAAGTCAGTCAATTTCCT...ACAATGCACGGCAGGTGGTGGCAAAGCTGGATGCCATTCTGACTGACATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp CTTCAGGATGTTCCTCCCAGGGCCATCAGTGCTCAGCAAAACGTAGTTCTCCTTGAAGGCTGCAATCTGTaGTTGAGTTGGGCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: LQDVPPRAISAQQNVVLLEGCNL*LSWAVH
Trigger: ATGCACTGCCCAACTCAACAACAGATTGCAGCCTTC...AAGGAGAACTACGTTTTGCTGAGCACTGATGGCCCTGGGAGGAACATCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS TCA 90 bp GGCTTTCCAGGAGCTAATGTGACTGCAACTCAGGTCAGGTATCCCTaGAGTACAGTAGGAGCCCCTAGAAGATACAGAATCAGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GFPGANVTATQVRYP*STVGAPRRYRIRGE
Trigger: CTCTCCTCTGATTCTGTATCTTCTAGGGGCTCCTACTGTACTTCAGGGATACCTGACCTGAGTTGCAGTCACATTAGCTCCTGGAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 90 bp GAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATaGCAAATGTCTGGGCTCAAGTTCCTTTCTTTGAACTGCTGTTAC +
Preference number: 5 (lower is better)
Translates to: EAPAPFSFQRLQLLT*QMSGLKFLSLNCCY
Trigger: GTAACAGCAGTTCAAAGAAAGGAACTTGAGCCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS CCA 90 bp TATTTAGGGCATAAGACTAGGTGGTTACAAGAGGCAAGGGTGGGTTaGGGTTCCACGTGGATACAGCCCCATAGGTTTCAAGGGAGGATA +
Preference number: 5 (lower is better)
Translates to: YLGHKTRWLQEARVG*GSTWIQPHRFQGRI
Trigger: TATCCTCCCTTGAAACCTATGGGGCTGTATCCACGTGGAACCCCAACCCACCCTTGCCTCTTGTAACCACCTAGTCTTATGCCCTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTGTACATGTACTGCCCTaGGGCCCGGACAATCTTAAC +
Preference number: 5 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVVHVLP*GPDNLN
Trigger: GTTAAGATTGTCCGGGCCCAAGGGCAGTACATGTAC...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp AACCCGCTGTGCATCTTCAAGAGTAAGAAGCAAGGCCCACTCACCTGGAGTACACTTGTGGCCTCATCTTaGATCAGATCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: NPLCIFKSKKQGPLTWSTLVASS*IRSTPM
Trigger: CATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG...TGTACTCCAGGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCACAGCGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393488.2
CDS-3UTR CAA 90 bp TGCATTGTCCAGGCTGAAGCACATTGGGGGCTTAAACTTCAGGATGTTCCTCCCCTTGTGGCCTCATCTTaGATCAGATCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: CIVQAEAHWGLKLQDVPPLVASS*IRSTPM
Trigger: CATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG...GGGAGGAACATCCTGAAGTTTAAGCCCCCAATGTGCTTCAGCCTGGACAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000506045.1
CDS-3UTR CAA 90 bp GCAAAGAGATTGCTTTGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGACAGAGGCTCCAGCTCTaGACATGGCAAATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: AKRLLWIWQHGSPWNPHRQRLQL*TWQMSG
Trigger: CCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTG...TCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp AGAAGTGCTTGCCTACCCGGCCAAAGCCAACCTGGATCTCATCTGCAACAAAGACTTCTCTTCCATGTCTaGATACCAAGTAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RSACLPGQSQPGSHLQQRLLFHV*IPSRQP
Trigger: AGGCTGCCTACTTGGTATCAAGACATGGAAGAGAAG...TCTTTGTTGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS CCA 90 bp TGCAGAACATTTTCATCACTTCCTGTGCAACCGTCCCGCTACTACTaGACCCAGGCATCCACTGATCTGCTTTCTGTTACTATGAGATGG +
Preference number: 5 (lower is better)
Translates to: CRTFSSLPVQPSRYY*TQASTDLLSVTMRW
Trigger: CCATCTCATAGTAACAGAAAGCAGATCAGTGGATGCCTGGGTCCAGTAGTAGCGGGACGGTTGCACAGGAAGTGATGAAAATGTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS-3UTR CAA 90 bp CCTCTGAAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGGGATGTTTGATTTTTaGCTGCCCGAGGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PLKADFICKREVRLAFSIGMFDF*LPEELH
Trigger: ATGCAGCTCCTCGGGCAGCAAAAAATCAAACATCCC...TATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTTCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp AAAGCTGACTTTATCTGTAAGAGGGAGGTCAGGCTCGCCTTCTCAATAGCGTGTGGGATGTTTGATTTTTaGCTGCCCGAGGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: KADFICKREVRLAFSIACGMFDF*LPEELH
Trigger: ATGCAGCTCCTCGGGCAGCAAAAAATCAAACATCCC...ACACGCTATTGAGAAGGCGAGCCTGACCTCCCTCTTACAGATAAAGTCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTAGTTCTCCTTCAGCCTaGATACCAAGTAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVSSPSA*IPSRQP
Trigger: AGGCTGCCTACTTGGTATCAAGGCTGAAGGAGAACT...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
CDS-3UTR CAA 90 bp GGTGTCCTTGTGGCCTCATCTTTGATCAGATCCACACCAATGAAGAGCCCAACATGGACAGAAAGGAAATaGACTGACTTGAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: GVLVASSLIRSTPMKSPTWTERK*TDLRGC
Trigger: GCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCA...TGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGAGGCCACAAGGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp AAGACAGGGAAGGAGTGGCTAGAGAAGCTGATAGAAAACAGGAGAGCACAGTGCGAGATTGCTTTGGATTaGGCAACATGGAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: KTGKEWLEKLIENRRAQCEIALD*ATWKSL
Trigger: CAGGGACTTCCATGTTGCCAAATCCAAAGCAATCTC...GCACTGTGCTCTCCTGTTTTCTATCAGCTTCTCTAGCCACTCCTTCCCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGGCTGCAATCTGTTGTaGAGTTGGGCAGTGCATACC +
Preference number: 5 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVGCNLL*SWAVHT
Trigger: GGTATGCACTGCCCAACTCAACAACAGATTGCAGCC...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474052.5
CDS-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTCTTGTGGCCTCATCTTaGATCAGATCCACACCAATG +
Preference number: 5 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVLVASS*IRSTPM
Trigger: CATTGGTGTGGATCTGATCAAAGATGAGGCCACAAG...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS-3UTR CAA 90 bp TTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGGTTTGGACAGAAAGGAAATaGACTGACTTGAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: LTDLRGCRHLGYSNRPVVWTERK*TDLRGC
Trigger: GCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCA...AACCACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS GCA 90 bp CTTGGGCTGGGAAAGAGCACAAGCTTTGGAGTCAGCAACAATTCTTaGAAGACTGCTGACTGGCTATGTGACAGCAGCTCATCATTTAAT +
Preference number: 5 (lower is better)
Translates to: LGLGKSTSFGVSNNS*KTADWLCDSSSSFN
Trigger: ATTAAATGATGAGCTGCTGTCACATAGCCAGTCAGCAGTCTTGCAAGAATTGTTGCTGACTCCAAAGCTTGTGCTCTTTCCCAGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS GCA 90 bp CGTGGATACAGCCCCATAGGTTTCAAGGGAGGATATAGCTGTTCCTaGCATCAAGTGCAAGCTAAGCATTGGAGAATTTCCAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: RGYSPIGFKGGYSCS*HQVQAKHWRISSVE
Trigger: TTCAACACTGGAAATTCTCCAATGCTTAGCTTGCACTTGATGGCAGGAACAGCTATATCCTCCCTTGAAACCTATGGGGCTGTATCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 90 bp AACTTGTCTCTCCACTCCACAGGTGGTTGCAAAGCAGGAAGCAGATaGGGTAACAAGTCGCTGAAACTTCGGATTGTTTCTGAAAGCATT +
Preference number: 5 (lower is better)
Translates to: NLSLHSTGGCKAGSR*GNKSLKLRIVSESI
Trigger: AATGCTTTCAGAAACAATCCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAACCACCTGTGGAGTGGAGAGACAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS-3UTR CAA 90 bp GCTCGCCTTCTCAATAGCGTGTATTTGGATGAGATGAGTTTCTTCTGGAGTACACCAACGTGCGCCACATaGCTGATGCAATCGATGTAT +
Preference number: 5 (lower is better)
Translates to: ARLLNSVYLDEMSFFWSTPTCAT*LMQSMY
Trigger: ATACATCGATTGCATCAGCAATGTGGCGCACGTTGG...TGTACTCCAGAAGAAACTCATCTCATCCAAATACACGCTATTGAGAAGGCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308158.10
ENST00000493197.5
CDS-3UTR CAA 90 bp AAATTGACTGACTTGAGGGGATGCAGACATCTGGGTTATTCCAACAGACCAGTGTGGACAGAAAGGAAATaGACTGACTTGAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: KLTDLRGCRHLGYSNRPVWTERK*TDLRGC
Trigger: GCATCCCCTCAAGTCAGTCAATTTCCTTTCTGTCCA...CACTGGTCTGTTGGAATAACCCAGATGTCTGCATCCCCTCAAGTCAGTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000393488.2
ENST00000474052.5
ENST00000493197.5
CDS CCA 90 bp TTTTTATGGAAGCTTCATGACAGCAGCATTCCTTCTAGCAGGATATaGGGTGGGACCGTCTCCAGAATTCAGGAAATAGAACACACAGAG +
Preference number: 5 (lower is better)
Translates to: FLWKLHDSSIPSSRI*GGTVSRIQEIEHTE
Trigger: CTCTGTGTGTTCTATTTCCTGAATTCTGGAGACGGTCCCACCCCATATCCTGCTAGAAGGAATGCTGCTGTCATGAAGCTTCCATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS-3UTR CAA 90 bp ACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCATAAGAATGCCCAGCAAAGAGATTGCTTaGGATTTGGCAACATGGAAG +
Preference number: 5 (lower is better)
Translates to: TWKSLESTQNKAGGIRMPSKEIA*DLATWK
Trigger: CTTCCATGTTGCCAAATCCAAAGCAATCTCTTTGCT...GGGCATTCTTATGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS CCA 90 bp AAGGGAGGATATAGCTGTTCCTGCCATCAAGTGCAAGCTAAGCATTaGAGAATTTCCAGTGTTGAAGAAACTAACCTTTGGGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: KGGYSCSCHQVQAKH*RISSVEETNLWEGA
Trigger: TGCTCCTTCCCAAAGGTTAGTTTCTTCAACACTGGAAATTCTCCAATGCTTAGCTTGCACTTGATGGCAGGAACAGCTATATCCTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS-3UTR CAA 90 bp GTGGTAACTGTCAATTACTGCTGGGACAGAGTAAGACAATGCAGCAAAGAGATTCTCAAGTTCCTTTCTTaGAACTGCTGTTACCCCACC +
Preference number: 5 (lower is better)
Translates to: VVTVNYCWDRVRQCSKEILKFLS*NCCYPT
Trigger: GGTGGGGTAACAGCAGTTCAAAGAAAGGAACTTGAG...AATCTCTTTGCTGCATTGTCTTACTCTGTCCCAGCAGTAATTGACAGTTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS-3UTR CAA 90 bp TGGATTTGGCAACATGGAAGTCCCTGGAATCCACACAGAATAAAGCTGGTGGCAAATGCAGCAAAGAGATaGCTTTGGATTTGGCAACAT +
Preference number: 5 (lower is better)
Translates to: WIWQHGSPWNPHRIKLVANAAKR*LWIWQH
Trigger: ATGTTGCCAAATCCAAAGCAATCTCTTTGCTGCATT...TGCCACCAGCTTTATTCTGTGTGGATTCCAGGGACTTCCATGTTGCCAAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS GCA 72 bp CGGAGGCGCGTGCGTAGTGCGTGCGTGCGTGCGTCGTaGGTGCGCGTGCCTCTCCGCGCAGCCCCGCGCCCC +
Preference number: 6 (lower is better)
Translates to: RRRVRSACVRAS*VRVPLRAAPRP
Trigger: GGGGCGCGGGGCTGCGCGGAGAGGCACGCGCACGCACGACGCACGCACGCACGCACTACGCACGCGCCTCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS TCA 72 bp TCTGCGGCCATGGTGGGTGGCCGTCAGTCGGTGCCGTaGCGCCACGCGGAGACGTCGCCGCGCGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SAAMVGGRQSVP*RHAETSPRGLG
Trigger: GCCCAGCCCGCGCGGCGACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 72 bp GCTGGTCTGCGGCCATGGTGGGTGGCCGTCAGTCGGTaGCGTGACGCCACGCGGAGACGTCGCCGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: AGLRPWWVAVSR*RDATRRRRRAG
Trigger: GCCCGCGCGGCGACGTCTCCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 72 bp GCGTGTCGGCCTTCGGGCGCTGGTCTGCGGCCATGGTaGGTGGCCGTCAGTCGGTGCCGTGACGCCACGCGG +
Preference number: 6 (lower is better)
Translates to: ACRPSGAGLRPW*VAVSRCRDATR
Trigger: CCGCGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 72 bp CCTCAGGGCCAGCGTGTCGGCCTTCGGGCGCTGGTCTaGGGCCATGGTGGGTGGCCGTCAGTCGGTGCCGTG +
Preference number: 6 (lower is better)
Translates to: PQGQRVGLRALV*GHGGWPSVGAV
Trigger: CACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCCCTGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 72 bp CAGCGGCTTCCTAGCCGGAGGCGCGTGCGTAGTGCGTaGGTGCGTGCGTCGTGCGTGCGCGTGCCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: QRLPSRRRVRSA*VRASCVRVPLR
Trigger: GCGGAGAGGCACGCGCACGCACGACGCACGCACGCACGCACTACGCACGCGCCTCCGGCTAGGAAGCCGCTG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 72 bp CTGGGCCTGGCAGCCTTCCGGCCCGTGGTCGTGCCTTaGCAGTCCCGCGCAGGAACTCGAGCGCTGCCCCGT +
Preference number: 6 (lower is better)
Translates to: LGLAAFRPVVVP*QSRAGTRALPR
Trigger: ACGGGGCAGCGCTCGAGTTCCTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS CCA 72 bp CCAGCGTGTCGGCCTTCGGGCGCTGGTCTGCGGCCATaGTGGGTGGCCGTCAGTCGGTGCCGTGACGCCACG +
Preference number: 6 (lower is better)
Translates to: PACRPSGAGLRP*WVAVSRCRDAT
Trigger: CGTGGCGTCACGGCACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CAA 72 bp ACTGGGCCTGGCAGCCTTCCGGCCCGTGGTCGTGCCTaGGCAGTCCCGCGCAGGAACTCGAGCGCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: TGPGSLPARGRA*AVPRRNSSAAP
Trigger: CGGGGCAGCGCTCGAGTTCCTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308158.10
CDS GCA 72 bp GGGATGGGTAGCAGCGGCTTCCTAGCCGGAGGCGCGTaGGTAGTGCGTGCGTGCGTGCGTCGTGCGTGCGCG +
Preference number: 6 (lower is better)
Translates to: GMGSSGFLAGGA*VVRACVRRACA
Trigger: CGCGCACGCACGACGCACGCACGCACGCACTACGCACGCGCCTCCGGCTAGGAAGCCGCTGCTACCCATCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 72 bp CGTTGCCTCAGGGCCAGCGTGTCGGCCTTCGGGCGCTaGTCTGCGGCCATGGTGGGTGGCCGTCAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: RCLRASVSAFGR*SAAMVGGRQSV
Trigger: CACCGACTGACGGCCACCCACCATGGCCGCAGACCAGCGCCCGAAGGCCGACACGCTGGCCCTGAGGCAACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308158.10
ENST00000323594.8
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CAA 90 bp GGCCCCGCCCCGAAGCGCCCGCGTTGCGGTGGTTCATTTCTTCGCTaGCCCACTGGGCCTGGCAGCCTTCCGGCCCGTGGTCGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: GPAPKRPRCGGSFLR*PTGPGSLPARGRAL
Trigger: CAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGGGCGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS TCA 72 bp AGGCTGCCAAGCGAGGCTGACACAGCCGAACAGCGGTaGGGGCGGGGCCGTCTCCTGAACTGGGCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RLPSEADTAEQR*GRGRLLNWAAW
Trigger: CCAGGCCGCCCAGTTCAGGAGACGGCCCCGCCCTCACCGCTGTTCGGCTGTGTCAGCCTCGCTTGGCAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS TCA 72 bp CTCCCAGGTCACTCTCGAGCCAGGCCCAGGTGCTGCTaGCGGGCCACCCTGGGTGAGGTCCTCTCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: LPGHSRARPRCC*RATLGEVLSGA
Trigger: GGCGCCTGAGAGGACCTCACCCAGGGTGGCCCGTCAGCAGCACCTGGGCCTGGCTCGAGAGTGACCTGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 72 bp TCGCTTGCCCACTGGGCCTGGCAGCCTTCCGGCCCGTaGTCGTGCCTTGGCAGTCCCGCGCAGGAACTCGAG +
Preference number: 6 (lower is better)
Translates to: SLAHWAWQPSGP*SCLGSPAQELE
Trigger: CTCGAGTTCCTGCGCGGGACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
CDS CCA 72 bp CCCGTCAGGCCTCCCCACAGCTCACTTGGGGCCTGCTaGCCACTTCACGGTCACCTGACCTCAAGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PVRPPHSSLGAC*PLHGHLTSSRR
Trigger: GCGGCGGCTTGAGGTCAGGTGACCGTGAAGTGGCCAGCAGGCCCCAAGTGAGCTGTGGGGAGGCCTGACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CAA 72 bp CAGGTTCGCACTCGGCCCCGCCCCGAAGCGCCCGCGTaGCGGTGGTTCATTTCTTCGCTTGCCCACTGGGCC +
Preference number: 6 (lower is better)
Translates to: QVRTRPRPEAPA*RWFISSLAHWA
Trigger: GGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGGGCGGGGCCGAGTGCGAACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS GCA 72 bp AGGTTCGCACTCGGCCCCGCCCCGAAGCGCCCGCGTTaGGGTGGTTCATTTCTTCGCTTGCCCACTGGGCCT +
Preference number: 6 (lower is better)
Translates to: RFALGPAPKRPR*GGSFLRLPTGP
Trigger: AGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGGCGCTTCGGGGCGGGGCCGAGTGCGAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 72 bp CCCGCGTTGCGGTGGTTCATTTCTTCGCTTGCCCACTaGGCCTGGCAGCCTTCCGGCCCGTGGTCGTGCCTT +
Preference number: 6 (lower is better)
Translates to: PALRWFISSLAH*AWQPSGPWSCL
Trigger: AAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAACGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 72 bp TGCTGCTTGGACCACGAGAGGGTGGCAGTGCCCAACTaGAAGAGGGCCGCCTCCGTCACACGGCTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: CCLDHERVAVPN*KRAASVTRLAP
Trigger: TGGAGCCAGCCGTGTGACGGAGGCGGCCCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS GCA 72 bp CCCCGTGTTGAAGTACTCAACGCCGGTGGCTTCAAATaGCCTCGCCACAGGCTGGGTTGCGGCCACGCAGGC +
Preference number: 6 (lower is better)
Translates to: PRVEVLNAGGFK*PRHRLGCGHAG
Trigger: GCCTGCGTGGCCGCAACCCAGCCTGTGGCGAGGGCATTTGAAGCCACCGGCGTTGAGTACTTCAACACGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494126.6
CDS CCA 72 bp TGTCAATCAGGGAGCTCAGGTGGCCGTGATACGCACTaGGGAGGAGAAGGGAGGGTAGGCTCGGGTCCGGGC +
Preference number: 6 (lower is better)
Translates to: CQSGSSGGRDTH*GGEGRVGSGPG
Trigger: GCCCGGACCCGAGCCTACCCTCCCTTCTCCTCCCCAGTGCGTATCACGGCCACCTGAGCTCCCTGATTGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS TCA 72 bp ACCGAGGGCCCCCTCACAGGTCAAGTGTGCTGCCTGTaGACCGACTCCCCCGACTCTCCCTTGTCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: TEGPLTGQVCCL*TDSPDSPLSAL
Trigger: AAGGGCAGACAAGGGAGAGTCGGGGGAGTCGGTTCACAGGCAGCACACTTGACCTGTGAGGGGGCCCTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS GCA 72 bp TCCGCGTCAGTCTCCCGGATCCTGAGAAAAGGTGGCTaGCCCGTCCCATGGGGACTCCATAAGGCCGCGTGT +
Preference number: 6 (lower is better)
Translates to: SASVSRILRKGG*PVPWGLHKAAC
Trigger: ACACGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATCCGGGAGACTGACGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS CCA 72 bp TTGCGGTGGTTCATTTCTTCGCTTGCCCACTGGGCCTaGCAGCCTTCCGGCCCGTGGTCGTGCCTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: LRWFISSLAHWA*QPSGPWSCLGS
Trigger: ACTGCCAAGGCACGACCACGGGCCGGAAGGCTGCCAGGCCCAGTGGGCAAGCGAAGAAATGAACCACCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308158.10
ENST00000474052.5
ENST00000489262.5
ENST00000494126.6
CDS CAA 90 bp GTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCAGTGCCCAACTGGAAGAGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: VPAVGVEHLVLLMCC*DHERVAVPNWKRAA
Trigger: GGCGGCCCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS TCA 72 bp GCTCACTTGGGGCCTGCTGGCCACTTCACGGTCACCTaGCCTCAAGCCGCCGCATTCCAATCCATCCTCCAC +
Preference number: 6 (lower is better)
Translates to: AHLGPAGHFTVT*PQAAAFQSILH
Trigger: GTGGAGGATGGATTGGAATGCGGCGGCTTGAGGTCAGGTGACCGTGAAGTGGCCAGCAGGCCCCAAGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS GCA 72 bp TCAGGACGGCCAGCCCCACAGCGCAGGACACTGGGCTaGCCCCAAACTGAGCCAGGGACAAAGAACATGTCA +
Preference number: 6 (lower is better)
Translates to: SGRPAPQRRTLG*PQTEPGTKNMS
Trigger: TGACATGTTCTTTGTCCCTGGCTCAGTTTGGGGGCAGCCCAGTGTCCTGCGCTGTGGGGCTGGCCGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS GCA 72 bp AGGCGCCAGGGTGAAGGTCTTCTCCGGAGTAAAGGCTaGCAAGCGAGGCTGACACAGCCGAACAGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: RRQGEGLLRSKG*QARLTQPNSGE
Trigger: CTCACCGCTGTTCGGCTGTGTCAGCCTCGCTTGGCAGCCTTTACTCCGGAGAAGACCTTCACCCTGGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CCA 72 bp ATGAGGGCTCAATGCCCAAGCTGCCCCACAGCCCCCTaGGCACCAGTAGCAAGTCTGGGCCTCTGGAACTTC +
Preference number: 6 (lower is better)
Translates to: MRAQCPSCPTAP*APVASLGLWNF
Trigger: GAAGTTCCAGAGGCCCAGACTTGCTACTGGTGCCCAGGGGGCTGTGGGGCAGCTTGGGCATTGAGCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS CCA 72 bp CCGGGCTTGGGGACAGGCACCGACCTGTTGTTGAGTTaGGCAGTGCATACCACGTGGACCCACTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PGLGTGTDLLLS*AVHTTWTHSFW
Trigger: CCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CCA 72 bp TCCCGGATCCTGAGAAAAGGTGGCTGCCCCGTCCCATaGGGACTCCATAAGGCCGCGTGTCTGATGAGCCGT +
Preference number: 6 (lower is better)
Translates to: SRILRKGGCPVP*GLHKAACLMSR
Trigger: ACGGCTCATCAGACACGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493197.5
CDS CCA 72 bp TGGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGGTaGCAGTGCCCAACTGGAAGAGGGCCGCCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: WFCSCAAWTTRG*QCPTGRGPPPS
Trigger: TGACGGAGGCGGCCCTCTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS CAA 90 bp TGGGAGAGGTGCCTGTGGGGAGTGACAGCGCCATGTTATCCGGGCTaGGGGACAGGCACCGACCTGTTGTTGAGTTGGGCAGTGCATACC +
Preference number: 6 (lower is better)
Translates to: WERCLWGVTAPCYPG*GTGTDLLLSWAVHT
Trigger: GGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGGCGCTGTCACTCCCCACAGGCACCTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS GCA 72 bp ATCAGATCCCACAGCATGAGGGCTCAATGCCCAAGCTaGCCCACAGCCCCCTGGGCACCAGTAGCAAGTCTG +
Preference number: 6 (lower is better)
Translates to: IRSHSMRAQCPS*PTAPWAPVASL
Trigger: CAGACTTGCTACTGGTGCCCAGGGGGCTGTGGGGCAGCTTGGGCATTGAGCCCTCATGCTGTGGGATCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS CCA 72 bp TCCCGGATCCTGAGAAAAGGTGGCTGCCCCGTCCCATaGGGACTCCATAAGGCCGCGTGTCTTCGATGGGAT +
Preference number: 6 (lower is better)
Translates to: SRILRKGGCPVP*GLHKAACLRWD
Trigger: ATCCCATCGAAGACACGCGGCCTTATGGAGTCCCCATGGGACGGGGCAGCCACCTTTTCTCAGGATCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489262.5
ENST00000494126.6
CDS CAA 72 bp TCCGGGCTTGGGGACAGGCACCGACCTGTTGTTGAGTaGGGCAGTGCATACCACGTGGACCCACTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: SGLGDRHRPVVE*GSAYHVDPLLL
Trigger: CAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CAA 72 bp TGCCTGTGGGGAGTGACAGCGCCATGTTATCCGGGCTaGGGGACAGGCACCGACCTGTTGTTGAGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: CLWGVTAPCYPG*GTGTDLLLSWA
Trigger: TGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGGCGCTGTCACTCCCCACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CAA 90 bp GCCATGTTATCCGGGCTTGGGGACAGGCACCGACCTGTTGTTGAGTaGGGCAGTGCATACCACGTGGACCCACTCCTTCTGGCCATCCAG +
Preference number: 6 (lower is better)
Translates to: AMLSGLGDRHRPVVE*GSAYHVDPLLLAIQ
Trigger: CTGGATGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CAA 90 bp ACAGCGCCATGTTATCCGGGCTTGGGGACAGGCACCGACCTGTTGTaGAGTTGGGCAGTGCATACCACGTGGACCCACTCCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: TAPCYPGLGTGTDLL*SWAVHTTWTHSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGGCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CAA 90 bp GTGACAGCGCCATGTTATCCGGGCTTGGGGACAGGCACCGACCTGTaGTTGAGTTGGGCAGTGCATACCACGTGGACCCACTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VTAPCYPGLGTGTDL*LSWAVHTTWTHSFW
Trigger: CCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGGCGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS TCA 72 bp GTTATCCGGGCTTGGGGACAGGCACCGACCTGTTGTTaGGTTGGGCAGTGCATACCACGTGGACCCACTCCT +
Preference number: 6 (lower is better)
Translates to: VIRAWGQAPTCC*VGQCIPRGPTP
Trigger: AGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS GCA 72 bp GCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTGGCAGTGCCCAACTGG +
Preference number: 6 (lower is better)
Translates to: AVGVEHLVLLMC*LDHERVAVPNW
Trigger: CCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS CCA 72 bp CCGTGTAGTGGCGAGCCAGCCTCAGGGCCAGGTCATTaGCTTCTGACCTATGACCGAAAAGGTGGGCATGAC +
Preference number: 6 (lower is better)
Translates to: PCSGEPASGPGH*LLTYDRKGGHD
Trigger: GTCATGCCCACCTTTTCGGTCATAGGTCAGAAGCCAATGACCTGGCCCTGAGGCTGGCTCGCCACTACACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS CAA 72 bp TGTTATCCGGGCTTGGGGACAGGCACCGACCTGTTGTaGAGTTGGGCAGTGCATACCACGTGGACCCACTCC +
Preference number: 6 (lower is better)
Translates to: CYPGLGTGTDLL*SWAVHTTWTHS
Trigger: GGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CAA 72 bp CCATGTTATCCGGGCTTGGGGACAGGCACCGACCTGTaGTTGAGTTGGGCAGTGCATACCACGTGGACCCAC +
Preference number: 6 (lower is better)
Translates to: PCYPGLGTGTDL*LSWAVHTTWTH
Trigger: GTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGTGCCTGTCCCCAAGCCCGGATAACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CAA 90 bp GTACCGGCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCAGTGCCCAACTTGTCTCTCCACTCC +
Preference number: 6 (lower is better)
Translates to: VPAVGVEHLVLLMCC*DHERVAVPNLSLHS
Trigger: GGAGTGGAGAGACAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGCCGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS TCA 72 bp CATTTCTGCATGTGTCCGCGTCAGTCTCCCGGATCCTaGGAAAAGGTGGCTGATGAGCCGTTGCCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: HFCMCPRQSPGS*EKVADEPLPQG
Trigger: GCCCTGAGGCAACGGCTCATCAGCCACCTTTTCTCAGGATCCGGGAGACTGACGCGGACACATGCAGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323594.8
CDS TCA 72 bp CCACCCCTGAAGACACACAAGGGAGGCCAACTTTCCTaGCAGAGCCCCCAAGTTCTTGGGCTGGGAAAGAGC +
Preference number: 6 (lower is better)
Translates to: PPLKTHKGGQLS*QSPQVLGLGKS
Trigger: GCTCTTTCCCAGCCCAAGAACTTGGGGGCTCTGTCAGGAAAGTTGGCCTCCCTTGTGTGTCTTCAGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS TCA 72 bp ATTCTGCCACTTGGGAGAAGTAGCCAGCAGGGGGAATaGTCTGCCCTCCCACACTGGGCAGAGACTCAGCGA +
Preference number: 6 (lower is better)
Translates to: ILPLGRSSQQGE*SALPHWAETQR
Trigger: TCGCTGAGTCTCTGCCCAGTGTGGGAGGGCAGATCATTCCCCCTGCTGGCTACTTCTCCCAAGTGGCAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS GCA 72 bp GCTGTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTaGTTGGACCACGAGAGGGTGGCAGTGCCCAACTTG +
Preference number: 6 (lower is better)
Translates to: AVGVEHLVLLMC*LDHERVAVPNL
Trigger: CAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS CCA 72 bp TGGTTCTGCTCATGTGCTGCTTGGACCACGAGAGGGTaGCAGTGCCCAACTTGTCTCTCCACTCCACAGGTG +
Preference number: 6 (lower is better)
Translates to: WFCSCAAWTTRG*QCPTCLSTPQV
Trigger: CACCTGTGGAGTGGAGAGACAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS CCA 72 bp AAACTGAGCCAGGGACAAAGAACATGTCAGATGCCCTaGCAGAGTGGGCCATGCCCCAGAGTGAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: KLSQGQRTCQMP*QSGPCPRVRVR
Trigger: CCTCACCCTCACTCTGGGGCATGGCCCACTCTGCCAGGGCATCTGACATGTTCTTTGTCCCTGGCTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 72 bp ACCGACCTGTTGTTGAGTTGGGCAGTGCATACCACGTaGACCCACTCCTTCTGGCCATCCAGGTTGCGGAAC +
Preference number: 6 (lower is better)
Translates to: TDLLLSWAVHTT*THSFWPSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGGTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476487.5
ENST00000514424.5
CDS CCA 72 bp TTCTGCCTTACAGGTGGGAGGGCAGGGCCAATGGGATaGGATACTGGTCCCCCACACCTGTTGCAATCAGAG +
Preference number: 6 (lower is better)
Translates to: FCLTGGRAGPMG*DTGPPHLLQSE
Trigger: CTCTGATTGCAACAGGTGTGGGGGACCAGTATCCCATCCCATTGGCCCTGCCCTCCCACCTGTAAGGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CCA 72 bp AAAGAGATGCATAGGGTGAGGTATGAAGGAAGGGCATaGAGCTTCCTGTGCCCTCCCTGGGCGCACCACCCT +
Preference number: 6 (lower is better)
Translates to: KEMHRVRYEGRA*SFLCPPWAHHP
Trigger: AGGGTGGTGCGCCCAGGGAGGGCACAGGAAGCTCCATGCCCTTCCTTCATACCTCACCCTATGCATCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS CCA 72 bp GGTGACAACGGAGGTGACATTCACTGTTGGCTGGATTaGACAGGCGCGGACACGGTTACCTTCCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: GDNGGDIHCWLD*TGADTVTFLPF
Trigger: GAAGGGCAGGAAGGTAACCGTGTCCGCGCCTGTCCAATCCAGCCAACAGTGAATGTCACCTCCGTTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514424.5
CDS CCA 72 bp CACAGTGGCGGTGACAACGGAGGTGACATTCACTGTTaGCTGGATTGGACAGGCGCGGACACGGTTACCTTC +
Preference number: 6 (lower is better)
Translates to: HSGGDNGGDIHC*LDWTGADTVTF
Trigger: GAAGGTAACCGTGTCCGCGCCTGTCCAATCCAGCCAACAGTGAATGTCACCTCCGTTGTCACCGCCACTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514424.5
CDS CAA 72 bp GTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCAGTGCCCAACTGGAAG +
Preference number: 6 (lower is better)
Translates to: VGVEHLVLLMCC*DHERVAVPNWK
Trigger: CTTCCAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506001.1
ENST00000510991.5
CDS CAA 90 bp TCAGGGACGAAGTCTTTTCCCTGGAGCTGGAAGGCCCAGAAGTGCTaGCCTACCCGGCCAAAGCCAACCTGGATCTCATTCTGCCACTTG +
Preference number: 6 (lower is better)
Translates to: SGTKSFPWSWKAQKC*PTRPKPTWISFCHL
Trigger: CAAGTGGCAGAATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGGCCTTCCAGCTCCAGGGAAAAGACTTCGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506045.1
CDS GCA 72 bp TGGTCGGGTTCTGCTAACCTTTCTGGCCCCACAGGCTaGCTTTCTTTGTCGTACCTCCTGTGTCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: WSGSANLSGPTG*LSLSYLLCLAL
Trigger: CAGAGCCAGACACAGGAGGTACGACAAAGAAAGGCAGCCTGTGGGGCCAGAAAGGTTAGCAGAACCCGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CCA 72 bp AACCCCTTAGGGCGCACAGTCCTCAGCAGTAGTAAGTaGGGTTCAACATGGGCTGTCCTGGCTTTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: NPLGRTVLSSSK*GSTWAVLAFQE
Trigger: CTCCTGGAAAGCCAGGACAGCCCATGTTGAACCCCACTTACTACTGCTGAGGACTGTGCGCCCTAAGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CAA 72 bp GTTGGTGTTGAGCACCTGGTTCTGCTCATGTGCTGCTaGGACCACGAGAGGGTGGCAGTGCCCAACTTGTCT +
Preference number: 6 (lower is better)
Translates to: VGVEHLVLLMCC*DHERVAVPNLS
Trigger: AGACAAGTTGGGCACTGCCACCCTCTCGTGGTCCAAGCAGCACATGAGCAGAACCAGGTGCTCAACACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323594.8
ENST00000494126.6
CDS CCA 72 bp CTTTACACACTAGGGCAGTGCCAGGGCCGTCTGAATTaGGGCACAATAGTGCTCCTCCTGGCTGGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: LYTLGQCQGRLN*GTIVLLLAGEE
Trigger: TTCTTCACCAGCCAGGAGGAGCACTATTGTGCCCCAATTCAGACGGCCCTGGCACTGCCCTAGTGTGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 72 bp ATGTCACTGTTGTTGAGTTGGGCAGTGCATACCACGTaGACCCACTCCTTCTGGCCATCCAGGTTGCGGAAC +
Preference number: 6 (lower is better)
Translates to: MSLLLSWAVHTT*THSFWPSRLRN
Trigger: GTTCCGCAACCTGGATGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS CCA 72 bp TATGAAGGAAGGGCATGGAGCTTCCTGTGCCCTCCCTaGGCGCACCACCCTTCTAGAACCTCTGTATGTTCA +
Preference number: 6 (lower is better)
Translates to: YEGRAWSFLCPP*AHHPSRTSVCS
Trigger: TGAACATACAGAGGTTCTAGAAGGGTGGTGCGCCCAGGGAGGGCACAGGAAGCTCCATGCCCTTCCTTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS CAA 90 bp AGGGTGATGATGCCTCAACCCAGAGAACTGAGCATGTCACTGTTGTaGAGTTGGGCAGTGCATACCACGTGGACCCACTCCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: RVMMPQPRELSMSLL*SWAVHTTWTHSFWP
Trigger: TGGCCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGTGACATGCTCAGTTCTCTGGGTTGAGGCATCATCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS CAA 90 bp ACCAGGGTGATGATGCCTCAACCCAGAGAACTGAGCATGTCACTGTaGTTGAGTTGGGCAGTGCATACCACGTGGACCCACTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: TRVMMPQPRELSMSL*LSWAVHTTWTHSFW
Trigger: CCAGAAGGAGTGGGTCCACGTGGTATGCACTGCCCAACTCAACAACAGTGACATGCTCAGTTCTCTGGGTTGAGGCATCATCACCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510913.5
CDS TCA 72 bp GCAACCGTCCCGCTACTACTGGACCCAGGCATCCACTaGTCTGCTTTCTGTTACTATGAGATGGCTACAGGG +
Preference number: 6 (lower is better)
Translates to: ATVPLLLDPGIH*SAFCYYEMATG
Trigger: CCCTGTAGCCATCTCATAGTAACAGAAAGCAGATCAGTGGATGCCTGGGTCCAGTAGTAGCGGGACGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 72 bp TGCATCTTCAAGAGTAAGAAGCAAGGCCCACTCACCTaGAGTACACTTAGGCAGAGCAGGGCTGGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: CIFKSKKQGPLT*STLRQSRAGLG
Trigger: CCCTAAGCCAGCCCTGCTCTGCCTAAGTGTACTCCAGGTGAGTGGGCCTTGCTTCTTACTCTTGAAGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393488.2
ENST00000476487.5
CDS CCA 72 bp CCACAGGCTGCCTTTCTTTGTCGTACCTCCTGTGTCTaGCTCTGTCACTCCTTCAGTGAAGCCTTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: PQAAFLCRTSCV*LCHSFSEAFRE
Trigger: CTCTCTGAAGGCTTCACTGAAGGAGTGACAGAGCCAGACACAGGAGGTACGACAAAGAAAGGCAGCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504096.1
CDS CCA 72 bp CAACTCCAGGTCTGGTATTTAGGGCATAAGACTAGGTaGTTACAAGAGGCAAGGGTGGGTTGGGGTTCCACG +
Preference number: 6 (lower is better)
Translates to: QLQVWYLGHKTR*LQEARVGWGST
Trigger: CGTGGAACCCCAACCCACCCTTGCCTCTTGTAACCACCTAGTCTTATGCCCTAAATACCAGACCTGGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CAA 72 bp GCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTaGACATGGCAAATGTCTGGGCTCAAGTTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: APAPFSFQRLQL*TWQMSGLKFLS
Trigger: AGAAAGGAACTTGAGCCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS CAA 90 bp CCTGACAGAGCCCCCAAGTTCTTGGGCTGGGAAAGAGCACAAGCTTaGGAGTCAGCAACAATTCTTGCAAGACTGCTGACTGGCTATGTG +
Preference number: 6 (lower is better)
Translates to: PDRAPKFLGWERAQA*ESATILARLLTGYV
Trigger: CACATAGCCAGTCAGCAGTCTTGCAAGAATTGTTGCTGACTCCAAAGCTTGTGCTCTTTCCCAGCCCAAGAACTTGGGGGCTCTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CAA 90 bp TCTCCCCACCACCAGGCAAGCAATCAGTTCTGCAGCGGACACCAGTaGGGTGTCCTCCAATTCAATTCCAACACTATCTACCTAGAGACA +
Preference number: 6 (lower is better)
Translates to: SPHHQASNQFCSGHQ*GVLQFNSNTIYLET
Trigger: TGTCTCTAGGTAGATAGTGTTGGAATTGAATTGGAGGACACCCAACTGGTGTCCGCTGCAGAACTGATTGCTTGCCTGGTGGTGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS CAA 90 bp ACTGAGGAAGCACCAGCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTaGACATGGCAAATGTCTGGGCTCAAGTTCCTTTCTTTGAACTGC +
Preference number: 6 (lower is better)
Translates to: TEEAPAPFSFQRLQL*TWQMSGLKFLSLNC
Trigger: GCAGTTCAAAGAAAGGAACTTGAGCCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGCTGGTGCTTCCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS CAA 90 bp AGACACACAAGGGAGGCCAACTTTCCTGACAGAGCCCCCAAGTTCTaGGGCTGGGAAAGAGCACAAGCTTTGGAGTCAGCAACAATTCTT +
Preference number: 6 (lower is better)
Translates to: RHTREANFPDRAPKF*GWERAQALESATIL
Trigger: AAGAATTGTTGCTGACTCCAAAGCTTGTGCTCTTTCCCAGCCCAAGAACTTGGGGGCTCTGTCAGGAAAGTTGGCCTCCCTTGTGTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS TCA 72 bp TCAACATGGGCTGTCCTGGCTTTCCAGGAGCTAATGTaGCTGCAACTCAGGTCAGGTATCCCTGAAGTACAG +
Preference number: 6 (lower is better)
Translates to: STWAVLAFQELM*LQLRSGIPEVQ
Trigger: CTGTACTTCAGGGATACCTGACCTGAGTTGCAGTCACATTAGCTCCTGGAAAGCCAGGACAGCCCATGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS GCA 72 bp GTGACGTACTCCTGGGAGTCTAGAAGGCCATTCATATaGATAGGGATGTGCTTATGCCCAGTGCTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: VTYSWESRRPFI*IGMCLCPVLCA
Trigger: TGCACACAGCACTGGGCATAAGCACATCCCTATGCATATGAATGGCCTTCTAGACTCCCAGGAGTACGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 72 bp GCCAACTTTCCTGACAGAGCCCCCAAGTTCTTGGGCTaGGAAAGAGCACAAGCTTTGGAGTCAGCAACAATT +
Preference number: 6 (lower is better)
Translates to: ANFPDRAPKFLG*ERAQALESATI
Trigger: AATTGTTGCTGACTCCAAAGCTTGTGCTCTTTCCCAGCCCAAGAACTTGGGGGCTCTGTCAGGAAAGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 72 bp CATAAGACTAGGTGGTTACAAGAGGCAAGGGTGGGTTaGGGTTCCACGTGGATACAGCCCCATAGGTTTCAA +
Preference number: 6 (lower is better)
Translates to: HKTRWLQEARVG*GSTWIQPHRFQ
Trigger: TTGAAACCTATGGGGCTGTATCCACGTGGAACCCCAACCCACCCTTGCCTCTTGTAACCACCTAGTCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 72 bp GGTGAAGAAAAGCCTGCTCTGGCAGGGGATGTTTATTaGCTGGATTGGAGCCCAACTCCAGGTCTGGTATTT +
Preference number: 6 (lower is better)
Translates to: GEEKPALAGDVY*LDWSPTPGLVF
Trigger: AAATACCAGACCTGGAGTTGGGCTCCAATCCAGCCAATAAACATCCCCTGCCAGAGCAGGCTTTTCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CAA 72 bp TACATCCCCAGCAGGCATGTCCCCTCCTGGGACACCTaGGAACACCAACCTTCTTGGCTGATGAATGAAAAA +
Preference number: 6 (lower is better)
Translates to: YIPSRHVPSWDT*EHQPSWLMNEK
Trigger: TTTTTCATTCATCAGCCAAGAAGGTTGGTGTTCCAAGGTGTCCCAGGAGGGGACATGCCTGCTGGGGATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS GCA 72 bp TGGGAGTCTAGAAGGCCATTCATATGCATAGGGATGTaGTTATGCCCAGTGCTGTGTGCATGCTCAGGTAAG +
Preference number: 6 (lower is better)
Translates to: WESRRPFICIGM*LCPVLCACSGK
Trigger: CTTACCTGAGCATGCACACAGCACTGGGCATAAGCACATCCCTATGCATATGAATGGCCTTCTAGACTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 72 bp ACCAGGCAAGCAATCAGTTCTGCAGCGGACACCAGTTaGGTGTCCTCCAATTCAATTCCAACACTATCTACC +
Preference number: 6 (lower is better)
Translates to: TRQAISSAADTS*VSSNSIPTLST
Trigger: GGTAGATAGTGTTGGAATTGAATTGGAGGACACCCAACTGGTGTCCGCTGCAGAACTGATTGCTTGCCTGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS CCA 72 bp TTTTCATCACTTCCTGTGCAACCGTCCCGCTACTACTaGACCCAGGCATCCACTGATCTGCTTTCTGTTACT +
Preference number: 6 (lower is better)
Translates to: FSSLPVQPSRYY*TQASTDLLSVT
Trigger: AGTAACAGAAAGCAGATCAGTGGATGCCTGGGTCCAGTAGTAGCGGGACGGTTGCACAGGAAGTGATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 72 bp GCTCCCTTCTCTTTCCAGAGGCTCCAGCTCTTGACATaGCAAATGTCTGGGCTCAAGTTCCTTTCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: APFSFQRLQLLT*QMSGLKFLSLN
Trigger: GTTCAAAGAAAGGAACTTGAGCCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTGGAAAGAGAAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS CAA 72 bp CACCAGGCAAGCAATCAGTTCTGCAGCGGACACCAGTaGGGTGTCCTCCAATTCAATTCCAACACTATCTAC +
Preference number: 6 (lower is better)
Translates to: HQASNQFCSGHQ*GVLQFNSNTIY
Trigger: GTAGATAGTGTTGGAATTGAATTGGAGGACACCCAACTGGTGTCCGCTGCAGAACTGATTGCTTGCCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481436.5
CDS TCA 72 bp GGAGCTAATGTGACTGCAACTCAGGTCAGGTATCCCTaGAGTACAGTAGGAGCCCCTAGAAGATACAGAATC +
Preference number: 6 (lower is better)
Translates to: GANVTATQVRYP*STVGAPRRYRI
Trigger: GATTCTGTATCTTCTAGGGGCTCCTACTGTACTTCAGGGATACCTGACCTGAGTTGCAGTCACATTAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS CCA 72 bp TTTCCAGAGGCTCCAGCTCTTGACATGGCAAATGTCTaGGCTCAAGTTCCTTTCTTTGAACTGCTGTTACCC +
Preference number: 6 (lower is better)
Translates to: FPEAPALDMANV*AQVPFFELLLP
Trigger: GGGTAACAGCAGTTCAAAGAAAGGAACTTGAGCCCAGACATTTGCCATGTCAAGAGCTGGAGCCTCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS GCA 72 bp AGCCCCATAGGTTTCAAGGGAGGATATAGCTGTTCCTaGCATCAAGTGCAAGCTAAGCATTGGAGAATTTCC +
Preference number: 6 (lower is better)
Translates to: SPIGFKGGYSCS*HQVQAKHWRIS
Trigger: GGAAATTCTCCAATGCTTAGCTTGCACTTGATGGCAGGAACAGCTATATCCTCCCTTGAAACCTATGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 72 bp AAGCTTCATGACAGCAGCATTCCTTCTAGCAGGATATaGGGTGGGACCGTCTCCAGAATTCAGGAAATAGAA +
Preference number: 6 (lower is better)
Translates to: KLHDSSIPSSRI*GGTVSRIQEIE
Trigger: TTCTATTTCCTGAATTCTGGAGACGGTCCCACCCCATATCCTGCTAGAAGGAATGCTGCTGTCATGAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511716.1
CDS TCA 72 bp GTTGCAAAGCAGGAAGCAGATGGGGTAACAAGTCGCTaGAACTTCGGATTGTTTCTGAAAGCATTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: VAKQEADGVTSR*NFGLFLKAFSA
Trigger: GGCTGAAAATGCTTTCAGAAACAATCCGAAGTTTCAGCGACTTGTTACCCCATCTGCTTCCTGCTTTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323594.8
ENST00000489262.5
ENST00000493197.5
ENST00000494126.6
CDS TCA 72 bp GGACACCTTGGAACACCAACCTTCTTGGCTGATGAATaGAAAAATGGGATTCTTTACACACTAGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: GHLGTPTFLADE*KNGILYTLGQC
Trigger: GCACTGCCCTAGTGTGTAAAGAATCCCATTTTTTCATTCATCAGCCAAGAAGGTTGGTGTTCCAAGGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 72 bp ATGTTTATTGGCTGGATTGGAGCCCAACTCCAGGTCTaGTATTTAGGGCATAAGACTAGGTGGTTACAAGAG +
Preference number: 6 (lower is better)
Translates to: MFIGWIGAQLQV*YLGHKTRWLQE
Trigger: CTCTTGTAACCACCTAGTCTTATGCCCTAAATACCAGACCTGGAGTTGGGCTCCAATCCAGCCAATAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CAA 72 bp AATGTATGTACCTGTGTAACCTCCCTCGCAGTGAAGTaGCAGAACATTTTCATCACTTCCTGTGCAACCGTC +
Preference number: 6 (lower is better)
Translates to: NVCTCVTSLAVK*QNIFITSCATV
Trigger: GACGGTTGCACAGGAAGTGATGAAAATGTTCTGCAACTTCACTGCGAGGGAGGTTACACAGGTACATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS TCA 72 bp TGTCAAAGGCCAAGGATAATAACAGTGAATATGTACTaGGAGCTCACCATGTGCCAGGCACATTCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: CQRPRIITVNMY*ELTMCQAHSEQ
Trigger: TTGCTCTGAATGTGCCTGGCACATGGTGAGCTCTCAGTACATATTCACTGTTATTATCCTTGGCCTTTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481811.5
CDS GCA 72 bp TGGCAAATGTCTGGGCTCAAGTTCCTTTCTTTGAACTaGTGTTACCCCACCCAGAATTCAGGAAATAGAACA +
Preference number: 6 (lower is better)
Translates to: WQMSGLKFLSLN*CYPTQNSGNRT
Trigger: TGTTCTATTTCCTGAATTCTGGGTGGGGTAACAGCAGTTCAAAGAAAGGAACTTGAGCCCAGACATTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS GCA 72 bp GTTTCAAGGGAGGATATAGCTGTTCCTGCCATCAAGTaGAAGCTAAGCATTGGAGAATTTCCAGTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: VSREDIAVPAIK*KLSIGEFPVLK
Trigger: CTTCAACACTGGAAATTCTCCAATGCTTAGCTTGCACTTGATGGCAGGAACAGCTATATCCTCCCTTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CAA 72 bp TTGACATGGCAAATGTCTGGGCTCAAGTTCCTTTCTTaGAACTGCTGTTACCCCACCCAGAATTCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: LTWQMSGLKFLS*NCCYPTQNSGN
Trigger: ATTTCCTGAATTCTGGGTGGGGTAACAGCAGTTCAAAGAAAGGAACTTGAGCCCAGACATTTGCCATGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476170.2
CDS CAA 90 bp GTTCCTGCCATCAAGTGCAAGCTAAGCATTGGAGAATTTCCAGTGTaGAAGAAACTAACCTTTGGGAAGGAGCATCAGTCAGAACAAAAA +
Preference number: 6 (lower is better)
Translates to: VPAIKCKLSIGEFPV*KKLTFGKEHQSEQK
Trigger: TTTTTGTTCTGACTGATGCTCCTTCCCAAAGGTTAGTTTCTTCAACACTGGAAATTCTCCAATGCTTAGCTTGCACTTGATGGCAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CCA 72 bp TATAGCTGTTCCTGCCATCAAGTGCAAGCTAAGCATTaGAGAATTTCCAGTGTTGAAGAAACTAACCTTTGG +
Preference number: 6 (lower is better)
Translates to: YSCSCHQVQAKH*RISSVEETNLW
Trigger: CCAAAGGTTAGTTTCTTCAACACTGGAAATTCTCCAATGCTTAGCTTGCACTTGATGGCAGGAACAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476487.5
CDS CAA 90 bp AGAAGATTCTCAGGACATCAACTAGTCAGTCACTTGCTTGTTTGTTaGGTATATATCAAATGCCTCCTATGTACTAGAAGCTGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: RRFSGHQLVSHLLVC*VYIKCLLCTRSWGK
Trigger: TTTCCCCCAGCTTCTAGTACATAGGAGGCATTTGATATATACCAAACAAACAAGCAAGTGACTGACTAGTTGATGTCCTGAGAATCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481436.5