RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHYHIP (Homo sapiens)

Ensembl gene IDs: ENSG00000168490

Ensembl transcript IDs: ENST00000321613.7, ENST00000454243.7, ENST00000518274.1, ENST00000522869.5, ENST00000523252.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCACGCATGGGCACAGTACAGTCATGGCACCATGGCAGAGCGAGTaGGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACA +
Preference number: 1 (lower is better)
Translates to: VTHGHSTVMAPWQSE*AKCTAGRGAGARGT
Trigger: TGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCATGACTGTACTGTGCCCATGCGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp GGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTaGCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCA +
Preference number: 1 (lower is better)
Translates to: GTMAERVSKVHSWAG*RGPRDSLQVSRSMP
Trigger: TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp CCAGGCTGGGTGTGGGCCACACTTACCAAGAGGACCACCGTCTGTTaGCTCCAATGCCAAGGGGCGAGGGGAGGGCAGCTGGGCAGAGTG +
Preference number: 1 (lower is better)
Translates to: PGWVWATLTKRTTVC*LQCQGARGGQLGRV
Trigger: CACTCTGCCCAGCTGCCCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCACACCCAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp TACAGTCATGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTaGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGT +
Preference number: 1 (lower is better)
Translates to: YSHGTMAERVSKVHS*AGCRGPRDSLQVSR
Trigger: ACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCATGACTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 90 bp CCAGAGAGACAGCTGGCCACACAACTGCCCCTGGCTACAGATAGGTaGCCGTTGTCCACCTGTCCCTCACCGAGGTATGGCCTTGCCGGC +
Preference number: 1 (lower is better)
Translates to: PERQLATQLPLATDR*PLSTCPSPRYGLAG
Trigger: GCCGGCAAGGCCATACCTCGGTGAGGGACAGGTGGACAACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp GCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAGTCATaGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGG +
Preference number: 1 (lower is better)
Translates to: AEGPQSRSRMGTVQS*HHGRASEQSAQLGG
Trigger: CCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCATGACTGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp AGGGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATaGGCACAGTACAGTCATGGCACCATGGCAGAGCGAGTGAGCAAA +
Preference number: 1 (lower is better)
Translates to: RGEAEQQRVHSPGHA*AQYSHGTMAERVSK
Trigger: TTTGCTCACTCGCTCTGCCATGGTGCCATGACTGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp CGTTGTCCACCTGTCCCTCACCGAGGTATGGCCTTGCCGGCCCGCTaGTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATC +
Preference number: 1 (lower is better)
Translates to: RCPPVPHRGMALPAR*CFRPSSRKSSCSSI
Trigger: GATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGACAGGTGGACAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp TCCAGGCCTCCTGACTCATCCCAGAGAGACAGCTGGCCACACAACTaGCCCTGGCTACAGATAGGTGACCGTTGTCCACCTGTCCCTCAC +
Preference number: 1 (lower is better)
Translates to: SRPPDSSQRDSWPHN*PWLQIGDRCPPVPH
Trigger: GTGAGGGACAGGTGGACAACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGGGATGAGTCAGGAGGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp CCTCCTGACTCATCCCAGAGAGACAGCTGGCCACACAACTGCCCCTaGCTACAGATAGGTGACCGTTGTCCACCTGTCCCTCACCGAGGT +
Preference number: 1 (lower is better)
Translates to: PPDSSQRDSWPHNCP*LQIGDRCPPVPHRG
Trigger: ACCTCGGTGAGGGACAGGTGGACAACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGGGATGAGTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp TCTCCCCAAGCCTCCAGGCCTCCTGACTCATCCCAGAGAGACAGCTaGCCACACAACTGCCCCTGGCTACAGATAGGTGACCGTTGTCCA +
Preference number: 1 (lower is better)
Translates to: SPQASRPPDSSQRDS*PHNCPWLQIGDRCP
Trigger: TGGACAACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGGGATGAGTCAGGAGGCCTGGAGGCTTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 90 bp GGGGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTaGGAAGCCTTTCCATGTCCACCAGGCTGGGTGTGGGCCACACTT +
Preference number: 1 (lower is better)
Translates to: GEVLQKSSPAANYRG*EAFPCPPGWVWATL
Trigger: AAGTGTGGCCCACACCCAGCCTGGTGGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp CTGAGTGGGGTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTaGATCTCTTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCC +
Preference number: 1 (lower is better)
Translates to: LSGVSGTKKDRPTAL*ISSGGSQATHGLWP
Trigger: GGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCACCCCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp GTGGCTGCTGTCTCAGACCCCTGCACTCTAAGCAAGGAGAAGGTATaGTGGGGTATGGAAGGAAGGAACATCCGACAGCCTGACGCCCCC +
Preference number: 1 (lower is better)
Translates to: VAAVSDPCTLSKEKV*WGMEGRNIRQPDAP
Trigger: GGGGGCGTCAGGCTGTCGGATGTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTTGCTTAGAGTGCAGGGGTCTGAGACAGCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp TGTCCACCTGTCCCTCACCGAGGTATGGCCTTGCCGGCCCGCTGCTaGTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATC +
Preference number: 1 (lower is better)
Translates to: CPPVPHRGMALPARC*FRPSSRKSSCSSII
Trigger: GATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGACAGGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp GCTGCTGTCTCAGACCCCTGCACTCTAAGCAAGGAGAAGGTATGCTaGGGTATGGAAGGAAGGAACATCCGACAGCCTGACGCCCCCAGT +
Preference number: 1 (lower is better)
Translates to: AAVSDPCTLSKEKVC*GMEGRNIRQPDAPS
Trigger: ACTGGGGGCGTCAGGCTGTCGGATGTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTTGCTTAGAGTGCAGGGGTCTGAGACAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp GAAGAGGGTTCTTTGGGGCAAGGAGCAGCCAGGGAGTCACGGTGGTaGAGGAGACTATTTATAGAAGGAAGGGATCCAGGCCTGGAGTGG +
Preference number: 1 (lower is better)
Translates to: EEGSLGQGAARESRW*RRLFIEGRDPGLEW
Trigger: CCACTCCAGGCCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCTGCTCCTTGCCCCAAAGAACCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 90 bp CAGGAAGAGGGTTCTTTGGGGCAAGGAGCAGCCAGGGAGTCACGGTaGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: QEEGSLGQGAARESR*CRRLFIEGRDPGLE
Trigger: CTCCAGGCCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCTGCTCCTTGCCCCAAAGAACCCTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 90 bp CCAGCTGCTCATCCATCATCTCTGTCACCTCTGAGAAAGTCACTGTaGGGCTGCACTCTCCTCTGCCTGATGTCACCTCCATCATCCCCC +
Preference number: 1 (lower is better)
Translates to: PAAHPSSLSPLRKSL*GCTLLCLMSPPSSP
Trigger: GGGGGATGATGGAGGTGACATCAGGCAGAGGAGAGTGCAGCCTCACAGTGACTTTCTCAGAGGTGACAGAGATGATGGATGAGCAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp AGGAAACCAGAGGAAAGGGGAAGTTCTCCAGAAGTCCAGCCCAGCTaGCAACTACAGAGGCTGAGAAGCCTTTCCATGTCCACCAGGCTG +
Preference number: 1 (lower is better)
Translates to: RKPEERGSSPEVQPS*QLQRLRSLSMSTRL
Trigger: CAGCCTGGTGGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCCCCTTTCCTCTGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 90 bp TTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTaGTCATCCATCATCTCTGTCACCTCTGAGAAAGTCACTGTGAGG +
Preference number: 1 (lower is better)
Translates to: LPARCCFRPSSRKSS*SSIISVTSEKVTVR
Trigger: CCTCACAGTGACTTTCTCAGAGGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 90 bp GGAGAAGGTATGCTGGGGTATGGAAGGAAGGAACATCCGACAGCCTaGCGCCCCCAGTGCCAAGAGAAGAAAGAGAGTTCCTTTCTAGAG +
Preference number: 1 (lower is better)
Translates to: GEGMLGYGRKEHPTA*RPQCQEKKESSFLE
Trigger: CTCTAGAAAGGAACTCTCTTTCTTCTCTTGGCACTGGGGGCGTCAGGCTGTCGGATGTTCCTTCCTTCCATACCCCAGCATACCTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCCGCCCCACAGCTCTCTaGATCTCTTCTGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: RGAGARGTAYRSHVPCQARPTAL*ISSGGS
Trigger: GCTGCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCG...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAGCAAAGTGCACAGCTaGGCGGGGTGCCGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVSKVHS*AGCRGP
Trigger: CGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCGGAGAGCCCAGGAGGTaGGCAGGTCTTTGGGAGATA +
Preference number: 2 (lower is better)
Translates to: RGAGARGTAYRSHVPCQAGEPRR*AGLWEI
Trigger: TATCTCCCAAAGACCTGCCCACCTCCTGGGCTCTCC...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAAGCAAAGTGCACAGCTaGGCGGGGTGCCGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTSKVHS*AGCRGP
Trigger: CGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCT...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCTCAACCCCAGTGGCTaGTGTCTCAGACCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGLNPSG*CLRPLH
Trigger: GTGCAGGGGTCTGAGACAGCAGCCACTGGGGTTGAG...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CAA 90 bp ACCAGGCTGGGTGTGGGCCACACTTACCAAGAGGACCACCGTCTGTaGCCTCCAATGCCAAGGGGCGAGGGGAGGGCAGCTGGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: TRLGVGHTYQEDHRL*PPMPRGEGRAAGQS
Trigger: ACTCTGCCCAGCTGCCCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCACACCCAGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGAAGTCCAGCCCAGCTaGCAACTACAGAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHEVQPS*QLQRLR
Trigger: TCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTC...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGGGGGAGTGTCCCGGTaGGCAGGTGGAGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: ETSRALRPWWFIDARRKHGGVSR*AGGEGG
Trigger: CCCTCCTTCTCCACCTGCCCACCGGGACACTCCCCC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCAGGAAGGGGCACCTCTaGGTCTCAGGGGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSRKGHL*VSGVSS
Trigger: GGAGGAGACCCCTGAGACCCAGAGGTGCCCCTTCCT...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR TCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGCCAACTACAGAGGCTaGGAAGCCTTTCCATGTCCA +
Preference number: 2 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGANYRG*EAFPCP
Trigger: TGGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGAGCAAGGAGAAGGTATaGTGGGGTATGGAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWSKEKV*WGMEGR
Trigger: CCTTCCTTCCATACCCCAGCATACCTTCTCCTTGCT...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAGGAGAGCCCAGGAGGTaGGCAGGTCTTTGGGAGATA +
Preference number: 2 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVGEPRR*AGLWEI
Trigger: TATCTCCCAAAGACCTGCCCACCTCCTGGGCTCTCC...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAGGTGGGCAGGTCTTTaGGAGATAGAGACCTGGACG +
Preference number: 2 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVRWAGL*EIETWT
Trigger: CGTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCAGGAAGAGGGTTCTTTaGGGCAAGGAGCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLRKRVL*GKEQPG
Trigger: CCCTGGCTGCTCCTTGCCCCAAAGAACCCTCTTCCT...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CAA 90 bp CAGATAGGTGACCGTTGTCCACCTGTCCCTCACCGAGGTATGGCCTaGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGC +
Preference number: 2 (lower is better)
Translates to: QIGDRCPPVPHRGMA*PARCCFRPSSRKSS
Trigger: GCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGACAGGTGGACAACGGTCACCTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCCATGTCCACCAGGCTaGGTGTGGGCCACACTTACC +
Preference number: 2 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLPCPPG*VWATLT
Trigger: GGTAAGTGTGGCCCACACCCAGCCTGGTGGACATGG...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAGTCCCGGTGGGCAGGTaGAGAAGGAGGGACAGCTCT +
Preference number: 2 (lower is better)
Translates to: SRALRPWWFIDARRKHSTVPVGR*RRRDSS
Trigger: AGAGCTGTCCCTCCTTCTCCACCTGCCCACCGGGAC...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR TCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCGCCAACTACAGAGGCTaGGAAGCCTTTCCATGTCCA +
Preference number: 2 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLANYRG*EAFPCP
Trigger: TGGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGC...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR TCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAAGCCTCCAGGCCTCCTaGCTCATCCCAGAGAGACAG +
Preference number: 2 (lower is better)
Translates to: SRALRPWWFIDARRKHSTSLQAS*LIPERQ
Trigger: CTGTCTCTCTGGGATGAGTCAGGAGGCCTGGAGGCT...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGAAGTCCAGCCCAGCTaGCAACTACAGAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: ETSRALRPWWFIDARRKHEVQPS*QLQRLR
Trigger: TCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGTGGGAGATAGAGACCTaGACGAGGCAAAGAACAGTA +
Preference number: 2 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGWEIET*TRQRTV
Trigger: TACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCA...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCGGGGGAGTGTCCCGGTaGGCAGGTGGAGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTGGVSR*AGGEGG
Trigger: CCCTCCTTCTCCACCTGCCCACCGGGACACTCCCCC...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAAGGAGAAGGTATGCTaGGGTATGGAAGGAAGGAAC +
Preference number: 2 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVKEKVC*GMEGRN
Trigger: GTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGAGGACCACCGTCTGTTaGCTCCAATGCCAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRRTTVC*LQCQGA
Trigger: CGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCT...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCCGCCCCACAGCTCTCTaGATCTCTTCTGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGRPTAL*ISSGGS
Trigger: GCTGCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCG...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAGGGACAGCTCTCCCATaGAGGAAGAGGGTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: SRALRPWWFIDARRKHSTGTALP*RKRVLW
Trigger: CCAAAGAACCCTCTTCCTGCATGGGAGAGCTGTCCC...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCCCATGTCCACCAGGCTaGGTGTGGGCCACACTTACC +
Preference number: 2 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGPCPPG*VWATLT
Trigger: GGTAAGTGTGGCCCACACCCAGCCTGGTGGACATGG...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR TCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTCCATGGCAGAGCGAGTaGGCAAAGTGCACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCPWQSE*AKCTAG
Trigger: CCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGG...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTCTCAACCCCAGTGGCTaGTGTCTCAGACCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCLNPSG*CLRPLH
Trigger: GTGCAGGGGTCTGAGACAGCAGCCACTGGGGTTGAG...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGGCCAGGGAGTCACGGTaGTGCAGGAGACTATTTATA +
Preference number: 2 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLARESR*CRRLFI
Trigger: TATAAATAGTCTCCTGCACCACCGTGACTCCCTGGC...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCGCTGTCTCAGACCCCTaGACTCTAAGCAAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGAVSDP*TLSKEK
Trigger: CTTCTCCTTGCTTAGAGTGCAGGGGTCTGAGACAGC...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAAGGGAGTCACGGTGGTaGAGGAGACTATTTATAGAA +
Preference number: 2 (lower is better)
Translates to: SRALRPWWFIDARRKHSTRESRW*RRLFIE
Trigger: TTCTATAAATAGTCTCCTGCACCACCGTGACTCCCT...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR GCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCGGCTGCACTCTCCTCTaGCTGATGTCACCTCCATCA +
Preference number: 2 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTGCTLL*LMSPPS
Trigger: TGATGGAGGTGACATCAGGCAGAGGAGAGTGCAGCC...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCAGGTATGCTGGGGTATaGAAGGAAGGAACATCCGAC +
Preference number: 2 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGRYAGV*KEGTSD
Trigger: GTCGGATGTTCCTTCCTTCCATACCCCAGCATACCT...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGTGGGAGATAGAGACCTaGACGAGGCAAAGAACAGTA +
Preference number: 2 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRWEIET*TRQRTV
Trigger: TACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCA...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTAAGGAGAAGGTATGCTaGGGTATGGAAGGAAGGAAC +
Preference number: 2 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCKEKVC*GMEGRN
Trigger: GTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTT...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 72 bp GGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTaGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAG +
Preference number: 3 (lower is better)
Translates to: GTMAERVSKVHS*AGCRGPRDSLQ
Trigger: CTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGGAGGACCACCGTCTGTaGCCTCCAATGCCAAGGGGC +
Preference number: 3 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWEDHRL*PPMPRG
Trigger: GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTC...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp GCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTaGCGGGGCCCGCGGGACAGCTTACAGGTCTCACGT +
Preference number: 3 (lower is better)
Translates to: AERVSKVHSWAG*RGPRDSLQVSR
Trigger: ACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGAGGACCACCGTCTGTaGCCTCCAATGCCAAGGGGC +
Preference number: 3 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGEDHRL*PPMPRG
Trigger: GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 72 bp GGGCACAGTACAGTCATGGCACCATGGCAGAGCGAGTaGGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: GHSTVMAPWQSE*AKCTAGRGAGA
Trigger: GGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCATGACTGTACTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp GTGTGGGCCACACTTACCAAGAGGACCACCGTCTGTTaGCTCCAATGCCAAGGGGCGAGGGGAGGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: VWATLTKRTTVC*LQCQGARGGQL
Trigger: CAGCTGCCCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCGGGGGCATTCTGTGGTaGGCCCTGAGTGGGGTGAGT +
Preference number: 3 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLGGILW*ALSGVS
Trigger: ACTCACCCCACTCAGGGCCAACCACAGAATGCCCCC...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACCACCGAGGTATGGCCTaGCCGGCCCGCTGCTGCTTC +
Preference number: 3 (lower is better)
Translates to: ETSRALRPWWFIDARRKHHRGMA*PARCCF
Trigger: GAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTG...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp CCTGTCCCTCACCGAGGTATGGCCTTGCCGGCCCGCTaGTGCTTCCGTCCTTCATCACGAAAATCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: PVPHRGMALPAR*CFRPSSRKSSC
Trigger: GCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp ACCGTTGTCCACCTGTCCCTCACCGAGGTATGGCCTTaGCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAA +
Preference number: 3 (lower is better)
Translates to: TVVHLSLTEVWP*RPAAASVLHHE
Trigger: TTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGACAGGTGGACAACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 72 bp GCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATaGGCACAGTACAGTCATGGCACCATGGCAGAGCGA +
Preference number: 3 (lower is better)
Translates to: AEQQRVHSPGHA*AQYSHGTMAER
Trigger: TCGCTCTGCCATGGTGCCATGACTGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCGAGGTGGGCAGGTCTTaGGGAGATAGAGACCTGGAC +
Preference number: 3 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLEVGRS*GDRDLD
Trigger: GTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCTC...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 72 bp CAGCTGGCCACACAACTGCCCCTGGCTACAGATAGGTaGCCGTTGTCCACCTGTCCCTCACCGAGGTATGGC +
Preference number: 3 (lower is better)
Translates to: QLATQLPLATDR*PLSTCPSPRYG
Trigger: GCCATACCTCGGTGAGGGACAGGTGGACAACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp CCTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTaGTGCTGTCAGCCCCTCCCACAGGCTCTCTGTTTG +
Preference number: 3 (lower is better)
Translates to: PDVTSIIPQTAG*CCQPLPQALCL
Trigger: CAAACAGAGAGCCTGTGGGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp GTCCCTCACCGAGGTATGGCCTTGCCGGCCCGCTGCTaGTTCCGTCCTTCATCACGAAAATCCAGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: VPHRGMALPARC*FRPSSRKSSCS
Trigger: TGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGGAGGTGGGCAGGTCTTaGGGAGATAGAGACCTGGAC +
Preference number: 3 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLEVGRS*GDRDLD
Trigger: GTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCTC...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCAGCTACCCATGGGCTTaGGCCCAGAGGGGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: VSGTKKDRPTALCISSGGSYPWA*AQRGFP
Trigger: AGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCT...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 72 bp CCACAGTCCAGGTCACGCATGGGCACAGTACAGTCATaGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAG +
Preference number: 3 (lower is better)
Translates to: PQSRSRMGTVQS*HHGRASEQSAQ
Trigger: CTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCATGACTGTACTGTGCCCATGCGTGACCTGGACTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 72 bp TCATCCCAGAGAGACAGCTGGCCACACAACTGCCCCTaGCTACAGATAGGTGACCGTTGTCCACCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: SSQRDSWPHNCP*LQIGDRCPPVP
Trigger: AGGGACAGGTGGACAACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR-3UTR CAA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCGGGGGCATTCTGTGGTaGGCCCTGAGTGGGGTGAGT +
Preference number: 3 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTGGILW*ALSGVS
Trigger: ACTCACCCCACTCAGGGCCAACCACAGAATGCCCCC...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR TCA 72 bp ATGCTGGGGTATGGAAGGAAGGAACATCCGACAGCCTaGCGCCCCCAGTGCCAAGAGAAGAAAGAGAGTTCC +
Preference number: 3 (lower is better)
Translates to: MLGYGRKEHPTA*RPQCQEKKESS
Trigger: GGAACTCTCTTTCTTCTCTTGGCACTGGGGGCGTCAGGCTGTCGGATGTTCCTTCCTTCCATACCCCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp GAGGAAAGGGGAAGTTCTCCAGAAGTCCAGCCCAGCTaGCAACTACAGAGGCTGAGAAGCCTTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: EERGSSPEVQPS*QLQRLRSLSMS
Trigger: GGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCCCCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp TCTTTGGGGCAAGGAGCAGCCAGGGAGTCACGGTGGTaGAGGAGACTATTTATAGAAGGAAGGGATCCAGGC +
Preference number: 3 (lower is better)
Translates to: SLGQGAARESRW*RRLFIEGRDPG
Trigger: GCCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCTGCTCCTTGCCCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CCA 72 bp CCCAGGAGGTGGGCAGGTCTTTGGGAGATAGAGACCTaGACGAGGCAAAGAACAGTAGGACAAGGAAACCAG +
Preference number: 3 (lower is better)
Translates to: PRRWAGLWEIET*TRQRTVGQGNQ
Trigger: CTGGTTTCCTTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR GCA 72 bp GTCTCAGACCCCTGCACTCTAAGCAAGGAGAAGGTATaGTGGGGTATGGAAGGAAGGAACATCCGACAGCCT +
Preference number: 3 (lower is better)
Translates to: VSDPCTLSKEKV*WGMEGRNIRQP
Trigger: AGGCTGTCGGATGTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTTGCTTAGAGTGCAGGGGTCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCACAGCAGCCGGACGCCTaGGTCACGGGCAGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPQQPDA*VTGSGV
Trigger: CACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTG...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCAGACCTCTGCGTGGATaGGCTCCCCGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: RGAGARGTAYRSHVPCQARPLRG*APRQGT
Trigger: TGTCCCCTGCCGGGGAGCTCATCCACGCAGAGGTCT...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGGAGCATACCGCTGGTaGGGGAGCCGTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHGAYRW*GSRGCH
Trigger: GTGGCAGCCACGGCTCCCCCACCAGCGGTATGCTCC...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGGGAGCATACCGCTGGTaGGGGAGCCGTGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWGAYRW*GSRGCH
Trigger: GTGGCAGCCACGGCTCCCCCACCAGCGGTATGCTCC...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCACGTGGAGCATACCGCTaGTGGGGGAGCCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPRGAYR*WGSRGC
Trigger: GCAGCCACGGCTCCCCCACCAGCGGTATGCTCCACG...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGCAGTGGCGTGCGCTTaGTCCTCTCCCGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPAVACA*SSPGCQ
Trigger: TTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGC...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGAGTCCTGCGGGGGCTaGCCCGTGTTGAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHESCGG*PVLNSV
Trigger: CACGGAGTTCAACACGGGCCAGCCCCCGCAGGACTC...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCGCTACCCATGGGCTTTaGCCCAGAGGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGAGARGTAYRSHVPCQAATHGL*PRGASL
Trigger: CAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGC...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGGGGGAGTGTCCCGGTaGGCAGGTGGAGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGGGVSR*AGGEGG
Trigger: CCCTCCTTCTCCACCTGCCCACCGGGACACTCCCCC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
69% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGAACATCCGACAGCCTaGCGCCCCCAGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPEHPTA*RPQCQE
Trigger: CTCTTGGCACTGGGGGCGTCAGGCTGTCGGATGTTC...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGACAGGGAGAGACCTCTaGGTGGATGAGCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWTGRDL*VDELPG
Trigger: GCCGGGGAGCTCATCCACGCAGAGGTCTCTCCCTGT...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGTCTCCTGTGGGGACTaGTGTGGAGCGGAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPVSCGD*CGAEVR
Trigger: TCGCACCTCCGCTCCACAGCAGTCCCCACAGGAGAC...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCACATGGGCAGCGGCACTaGCTTGGCCACGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPHGQRH*LGHELG
Trigger: ACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATG...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCACAAACAGCCGGCTGCTaGTGTCAGCCCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPQTAGC*CQPLPQ
Trigger: CTGTGGGAGGGGCTGACAGCAGCAGCCGGCTGTTTG...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACCTGGTGGGGGAGCCGTaGCTGCCACTGTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHLVGEP*LPLLSF
Trigger: GAAGGACAACAGTGGCAGCCACGGCTCCCCCACCAG...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCATCCAGGATGAGGTCCTaGGCGTGGCGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPSRMRS*AWRKTS
Trigger: GCTGGTCTTCCGCCACGCCCAGGACCTCATCCTGGA...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGTCCCGGTGGGCAGGTaGAGAAGGAGGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPVPVGR*RRRDSS
Trigger: AGAGCTGTCCCTCCTTCTCCACCTGCCCACCGGGAC...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACAGGAAGGGGCACCTCTaGGTCTCAGGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHRKGHL*VSGVSS
Trigger: GGAGGAGACCCCTGAGACCCAGAGGTGCCCCTTCCT...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCCTGGCTACAGATAGGTaGCCGTTGTCCACCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RGAGARGTAYRSHVPCQALATDR*PLSTCP
Trigger: GGGACAGGTGGACAACGGTCACCTATCTGTAGCCAG...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCTCACGGGCAGTGGCGTaGGCTTGCTCCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRSRAVA*ACSSPG
Trigger: GCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGA...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCTGCTTCACTGCCGTCTaGACGGCCACACTGTACTCC +
Preference number: 4 (lower is better)
Translates to: RGAGARGTAYRSHVPCQACFTAV*TATLYS
Trigger: GGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGCA...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACGTGGAGCATACCGCTaGTGGGGGAGCCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVRGAYR*WGSRGC
Trigger: GCAGCCACGGCTCCCCCACCAGCGGTATGCTCCACG...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGAAGAGGCGCTGAGCTaGGATCTGGAAGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGEEALS*DLEAPA
Trigger: CGCTGGCGCTTCCAGATCCCAGCTCAGCGCCTCTTC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCAGCCAAGCTACCCATaGGCTTTGGCCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGQPSYP*ALAQRG
Trigger: GCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTG...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCGGGGGAGTGTCCCGGTaGGCAGGTGGAGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRGGVSR*AGGEGG
Trigger: CCCTCCTTCTCCACCTGCCCACCGGGACACTCCCCC...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCAGCAAAGTGCACAGCTaGGCGGGGTGCCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLSKVHS*AGCRGP
Trigger: CGGGCCCCGGCACCCCGCCCAGCTGTGCACTTTGCT...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACACTCCGTGTTGCAGCTaGAGAAGACCCCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHTPCCS*RRPRGA
Trigger: TGCTCCACGGGGTCTTCTTCAGCTGCAACACGGAGT...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGAGCCTCCAGGCCTCCTaGCTCATCCCAGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGSLQAS*LIPERQ
Trigger: CTGTCTCTCTGGGATGAGTCAGGAGGCCTGGAGGCT...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGGCTGCCAAGGAGGCTaGTTCCATGCCCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAGCQGG*FHAPQP
Trigger: TGGCTGCGGGGCATGGAAGCAGCCTCCTTGGCAGCC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGGCTCCACTGGGCTCTaGAGAGGAAAAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGGSTGL*RGKARR
Trigger: CCTGCGAGCTTTTCCTCTGCAGAGCCCAGTGGAGCC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCCAAGAGCTCACAGGTaGCAGGGCCCTCGGATTCAG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGPRAHR*QGPRIQ
Trigger: CTGAATCCGAGGGCCCTGGCACCTGTGAGCTCTTGG...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR GCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACTACTCCCCATCGCTCTaGTTCACTGCCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHYSPSL*FTAVCT
Trigger: CGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTA...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGAGGACCACCGTCTGTTaGCTCCAATGCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGRTTVC*LQCQGA
Trigger: CGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCT...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGACCGAGGTATGGCCTTaGCGGCCCGCTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGTEVWP*RPAAAS
Trigger: GGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGT...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCCAGCCAGCTCCTGTCTaGCTGTGCAGCGCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAQPAPV*LCSASL
Trigger: CAGCGACGCGCTGCACAGCCAGACAGGAGCTGGCTG...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGGAGAGACCTCTGCGTaGATGAGCTCCCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAGETSA*MSSPAG
Trigger: CCCTGCCGGGGAGCTCATCCACGCAGAGGTCTCTCC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCACATGGCTGGCTCCACTaGGCTCTGCAGAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPHGWLH*ALQRKS
Trigger: GCTTTTCCTCTGCAGAGCCCAGTGGAGCCAGCCATG...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAGGCCTCTCACCGTCATaGGCAGCGGCACTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVGLSPS*AAALPW
Trigger: CCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCC...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCTGAAGAAGACCCCGTaGAGCATACCGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGLKKTP*SIPLVG
Trigger: CCCCACCAGCGGTATGCTCCACGGGGTCTTCTTCAG...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGGAGAGCCCAGGAGGTaGGCAGGTCTTTGGGAGATA +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHGEPRR*AGLWEI
Trigger: TATCTCCCAAAGACCTGCCCACCTCCTGGGCTCTCC...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCTCCCTCACCGAGGTATaGCCTTGCCGGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRSLTEV*PCRPAA
Trigger: AGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGA...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGGAACATCCGACAGCCTaGCGCCCCCAGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGEHPTA*RPQCQE
Trigger: CTCTTGGCACTGGGGGCGTCAGGCTGTCGGATGTTC...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACCGGCCCACTCCCAGCTaGGGAAGGGGCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHRPTPS*GRGTSG
Trigger: CCCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCG...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGGCTCCTGTCTGGCTGTaGAGCGCGTCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRAPVWL*SASLLP
Trigger: GGGCAGCAGCGACGCGCTGCACAGCCAGACAGGAGC...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACTGGCATAATCCCCAGTaGAGAACTCCACCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHWHNPQ*RTPPSR
Trigger: GCGAGACGGTGGAGTTCTGCACTGGGGATTATGCCA...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGCCTTGCCGGCCCGCTaGTGCTTCCGTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAALPAR*CFRPSS
Trigger: TGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAAGCTGGCCACACAACTaGCCCTGGCTACAGATAGGT +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPSWPHN*PWLQIG
Trigger: ACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCT...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCCGTTGCCGCGGTACATaGCTGGCTCCACTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLARCRGT*LAPLGS
Trigger: AGAGCCCAGTGGAGCCAGCCATGTACCGCGGCAACG...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGCTGTGGGGACTGCTGTaGAGCGGAGGTGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGLWGLL*SGGARL
Trigger: AAGCCTCGCACCTCCGCTCCACAGCAGTCCCCACAG...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CCA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACTTGATCTCAATGCTGTaGGGCGTGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHLISML*GVDSSS
Trigger: GGAGCTGCTGTCCACGCCCCACAGCATTGAGATCAA...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCCCTTGGCCACGAGCTTaGTGGGGACGTCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSPWPRA*WGRPGA
Trigger: AGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGG...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCGAGTCCTGCGGGGGCTaGCCCGTGTTGAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSESCGG*PVLNSV
Trigger: CACGGAGTTCAACACGGGCCAGCCCCCGCAGGACTC...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGGCGCCAGCACCAGGATaGCGTAGTGGTAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGAPAPG*RSGRPC
Trigger: ACACGGCCTACCACTACGCCATCCTGGTGCTGGCGC...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGGGCACAGTACAGTCATaGCACCATGGCAGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWGTVQS*HHGRAS
Trigger: ACTCGCTCTGCCATGGTGCCATGACTGTACTGTGCC...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCAGGGCCCTCAGGCCATaGTGGTTTATTGATGCACGT +
Preference number: 4 (lower is better)
Translates to: RGAGARGTAYRSHVPCQARALRP*WFIDAR
Trigger: ACGTGCATCAATAAACCACCATGGCCTGAGGGCCCT...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CAA 72 bp GGTGTGGGCCACACTTACCAAGAGGACCACCGTCTGTaGCCTCCAATGCCAAGGGGCGAGGGGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVGHTYQEDHRL*PPMPRGEGRAA
Trigger: AGCTGCCCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CAA 72 bp GACCGTTGTCCACCTGTCCCTCACCGAGGTATGGCCTaGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: DRCPPVPHRGMA*PARCCFRPSSR
Trigger: TCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGACAGGTGGACAACGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACACCTAGCGGCCCACGCTaGTGTTGCAGGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTPSGPR*CCRSCS
Trigger: GCTGCAAGACCTGCAACATCAGCGTGGGCCGCTAGG...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGCCATGGCAGAGCGAGTaGGCAAAGTGCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGPWQSE*AKCTAG
Trigger: CCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGG...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCCATGGCAGAGCGAGTaGGCAAAGTGCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRPWQSE*AKCTAG
Trigger: CCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGG...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAAGGAGGCTGCTTCCATaGCCCGCAGCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTRRLLP*PAASSC
Trigger: ACAGGAGCTGGCTGCGGGGCATGGAAGCAGCCTCCT...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGTGGGGACGTCCCGGTaGTTGAACTTGTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPVGTSR*LNLLEF
Trigger: GAATTCCAACAAGTTCAAGCACCGGGACGTCCCCAC...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCCGGAGAAGCGGAGCATaGGGCCTGCGATCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLRRSGA*GLRSAQ
Trigger: CTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCG...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCCGGAGAAGCGGAGCATaGGGCCTGCGATCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSRRSGA*GLRSAQ
Trigger: CTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCG...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAGGACCACCGTCTGTTaGCTCCAATGCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVRTTVC*LQCQGA
Trigger: CGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGAAGTCCAGCCCAGCTaGCAACTACAGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGEVQPS*QLQRLR
Trigger: TCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGGGACAGCTCTCCCATaGAGGAAGAGGGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGGTALP*RKRVLW
Trigger: CCAAAGAACCCTCTTCCTGCATGGGAGAGCTGTCCC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACACAAACAGCCGGCTGCTaGTGTCAGCCCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTQTAGC*CQPLPQ
Trigger: CTGTGGGAGGGGCTGACAGCAGCAGCCGGCTGTTTG...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCCCTTGGCCACGAGCTTaGTGGGGACGTCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGPWPRA*WGRPGA
Trigger: AGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGG...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACCCCCCAGGGAGCCTTTaGGCGCCAGCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHPPGSL*APAPGW
Trigger: CCATCCTGGTGCTGGCGCCCAAAGGCTCCCTGGGGG...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATGAGGTCCTGGGCGTaGCGGAAGACCAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLMRSWA*RKTSSP
Trigger: TGGGGAGCTGGTCTTCCGCCACGCCCAGGACCTCAT...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCCCATGTCCACCAGGCTaGGTGTGGGCCACACTTACC +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAPCPPG*VWATLT
Trigger: GGTAAGTGTGGCCCACACCCAGCCTGGTGGACATGG...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCTCCCGGCCAGCAGGGTaGCAGGAGAGCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGSRPAG*QESRQS
Trigger: GCTCTGTCTGCTCTCCTGCCACCCTGCTGGCCGGGA...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTATCCCAGAGAGACAGCTaGCCACACAACTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVSQRDS*PHNCPW
Trigger: CCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGGGA...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGACCTCTGCGTGGATaGGCTCCCCGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHRPLRG*APRQGT
Trigger: TGTCCCCTGCCGGGGAGCTCATCCACGCAGAGGTCT...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCGGTTGGTGCTGGGATTaGAGAGGCGCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSGWCWD*RGAELG
Trigger: TCCCAGCTCAGCGCCTCTTCAATCCCAGCACCAACC...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGGGGGTCAGCAAGCGTTaGCGCGGTACATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRGVSKR*RGTWLA
Trigger: AGCCAGCCATGTACCGCGGCAACGCTTGCTGACCCC...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR GCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCCATGGGCAGCGGCACTaGCTTGGCCACGAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGHGQRH*LGHELG
Trigger: ACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATG...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAACTCCTTGTGATGGTTaGGGTAGAAGACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: WAGCRGPRDSLQVSRSMPTPCDG*GRRRRS
Trigger: GCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGT...TGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCAGACTCATGAGCTGGTaGCCACTGATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLARLMSW*PLISPR
Trigger: CCTGGGGGAGATCAGTGGGCACCAGCTCATGAGTCT...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCCGCCCCACAGCTCTCTaGATCTCTTCTGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLRPTAL*ISSGGS
Trigger: GCTGCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCG...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACATTGCCGGCCCGCTGCTaGTTCCGTCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTLPARC*FRPSSR
Trigger: TCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAA...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGGAGAGACCTCTGCGTaGATGAGCTCCCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHGETSA*MSSPAG
Trigger: CCCTGCCGGGGAGCTCATCCACGCAGAGGTCTCTCC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAGGTCACTGTCCTCCATaGCCCAGGAGATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTGHCPP*PRRCGR
Trigger: CCTTCCGCATCTCCTGGGCCATGGAGGACAGTGACC...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGTCCAGGATGAGGTCCTaGGCGTGGCGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRSRMRS*AWRKTS
Trigger: GCTGGTCTTCCGCCACGCCCAGGACCTCATCCTGGA...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGCTACCCATGGGCTTTaGCCCAGAGGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGATHGL*PRGASL
Trigger: CAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGC...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCAGGAAGAGGGTTCTTTaGGGCAAGGAGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRRKRVL*GKEQPG
Trigger: CCCTGGCTGCTCCTTGCCCCAAAGAACCCTCTTCCT...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCGACGATGTTCCCAGCTaGGCAGCGCAAGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLDDVPS*AAQEER
Trigger: CCTCTCTTCTTGCGCTGCTCAGCTGGGAACATCGTC...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCGGCCCACTCCCAGCTaGGGAAGGGGCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRRPTPS*GRGTSG
Trigger: CCCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGGAGGCTGCTTCCATaGCCCGCAGCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHRRLLP*PAASSC
Trigger: ACAGGAGCTGGCTGCGGGGCATGGAAGCAGCCTCCT...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTTCACGGGCAGTGGCGTaGGCTTGCTCCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLSRAVA*ACSSPG
Trigger: GCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGA...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGGCTCCACTGGGCTCTaGAGAGGAAAAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGGSTGL*RGKARR
Trigger: CCTGCGAGCTTTTCCTCTGCAGAGCCCAGTGGAGCC...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAATCGCTCTGCTTCACTaGCGTCTGCACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTIALLH*RLHGHT
Trigger: AGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGAT...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCTGGCATAATCCCCAGTaGAGAACTCCACCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRWHNPQ*RTPPSR
Trigger: GCGAGACGGTGGAGTTCTGCACTGGGGATTATGCCA...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCGGGACAGCTCTCCCATaGAGGAAGAGGGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRGTALP*RKRVLW
Trigger: CCAAAGAACCCTCTTCCTGCATGGGAGAGCTGTCCC...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACACCCCAAACAGCCGGCTaGTGCTGTCAGCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTPQTAG*CCQPLP
Trigger: TGGGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGG...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGGCTGCACTCTCCTCTaGCTGATGTCACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAGCTLL*LMSPPS
Trigger: TGATGGAGGTGACATCAGGCAGAGGAGAGTGCAGCC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCTCACGAAAATCCAGCTaGTCATCCATCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGAGARGTAYRSHVPCQASRKSS*SSIISV
Trigger: GACAGAGATGATGGATGAGCAGCTGGATTTTCGTGA...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGGCCTCTCTCCTCACTaGGGTCAGCAAGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHGLSPH*GQQALP
Trigger: CGGCAACGCTTGCTGACCCCAGTGAGGAGAGAGGCC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGGTCACTGTCCTCCATaGCCCAGGAGATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGGHCPP*PRRCGR
Trigger: CCTTCCGCATCTCCTGGGCCATGGAGGACAGTGACC...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCTGCAGGTCTTGCAGCTaGGGTCCTTCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSCRSCS*GPSWHR
Trigger: CCGATGCCAAGAAGGACCCCAGCTGCAAGACCTGCA...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAGGAGAGCCCAGGAGGTaGGCAGGTCTTTGGGAGATA +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTGEPRR*AGLWEI
Trigger: TATCTCCCAAAGACCTGCCCACCTCCTGGGCTCTCC...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCAGCCAAGCTACCCATaGGCTTTGGCCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLQPSYP*ALAQRG
Trigger: GCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTG...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGAGTCCAGGTCACGCATaGGCACAGTACAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGSPGHA*AQYSHG
Trigger: GCCATGACTGTACTGTGCCCATGCGTGACCTGGACT...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAGTCCAGGTCACGCATaGGCACAGTACAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVSPGHA*AQYSHG
Trigger: GCCATGACTGTACTGTGCCCATGCGTGACCTGGACT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGTCCCAGAGAGACAGCTaGCCACACAACTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRSQRDS*PHNCPW
Trigger: CCAGGGGCAGTTGTGTGGCCAGCTGTCTCTCTGGGA...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCGCCCTCAGGCCATGGTaGTTTATTGATGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPRALRPW*FIDARR
Trigger: GCGACGTGCATCAATAAACCACCATGGCCTGAGGGC...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGTCTCCTGTGGGGACTaGCTCCACTGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHVSCGD*LHWALQ
Trigger: CTGCAGAGCCCAGTGGAGCCAGTCCCCACAGGAGAC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454243.7
3UTR CAA 72 bp CTGAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATaGATGCACGTCGCAAGCACAGCACAGGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LRRAGPSGHGGL*MHVASTAQAGG
Trigger: TCCGCCTGCCTGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCCTGAGAAAGTCACTGTaGGGCTGCACTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLLRKSL*GCTLLC
Trigger: GCAGAGGAGAGTGCAGCCTCACAGTGACTTTCTCAG...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGCCATGGTGGTTTATTaGTGCACGTCGCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAAMVVY*CTSQAQ
Trigger: CTGTGCTTGCGACGTGCATCAATAAACCACCATGGC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGTGCTCCTCTCCCGGCTaGCAAGGAGGCTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLCSSPG*QGGCFH
Trigger: ATGGAAGCAGCCTCCTTGGCAGCCGGGAGAGGAGCA...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGGCGGAGCATGCGGCCTaGGATCTGCTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLAEHAA*DLLSFL
Trigger: GAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGC...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACTGGGGGAGCCGTGGCTaGCACTGTTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHWGSRG*HCCPSG
Trigger: ACCTGAAGGACAACAGTGGCAGCCACGGCTCCCCCA...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGCTGTCTCAGACCCCTaGACTCTAAGCAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAAVSDP*TLSKEK
Trigger: CTTCTCCTTGCTTAGAGTGCAGGGGTCTGAGACAGC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAGCTGTCTCAGACCCCTaGACTCTAAGCAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVAVSDP*TLSKEK
Trigger: CTTCTCCTTGCTTAGAGTGCAGGGGTCTGAGACAGC...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCAACCCCAGTGGCTaGTGTCTCAGACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLLNPSG*CLRPLH
Trigger: GTGCAGGGGTCTGAGACAGCAGCCACTGGGGTTGAG...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAGGCTGCACTCTCCTCTaGCTGATGTCACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTGCTLL*LMSPPS
Trigger: TGATGGAGGTGACATCAGGCAGAGGAGAGTGCAGCC...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACCCACCCCCACAGCAATaGTGTCAGCACAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHPPPQQ*CQHRGK
Trigger: CTTCCCCCTGTGCTGACAGCATTGCTGTGGGGGTGG...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCCACCCCCACAGCAATaGTGTCAGCACAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLPPPQQ*CQHRGK
Trigger: CTTCCCCCTGTGCTGACAGCATTGCTGTGGGGGTGG...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGCCGCGGTACATGGCTaGCTCCACTGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGAAVHG*LHWALQ
Trigger: CTGCAGAGCCCAGTGGAGCCAGCCATGTACCGCGGC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGGCCTCTCACCGTCATaGGCAGCGGCACTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGGLSPS*AAALPW
Trigger: CCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAGAGCCAGGTGCTCCTTaGCATAATCCCCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTEPGAP*HNPQCR
Trigger: TCTGCACTGGGGATTATGCCAAGGAGCACCTGGCTC...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCGAGCCAGGTGCTCCTTaGCATAATCCCCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSEPGAP*HNPQCR
Trigger: TCTGCACTGGGGATTATGCCAAGGAGCACCTGGCTC...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGAGCATGTTCCCGCAGTaGGTCCTGGCATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRSMFPQ*VLACWK
Trigger: CTTCCAGCATGCCAGGACCCACTGCGGGAACATGCT...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACACTGGTGGGGGAGCCGTaGCTGCCACTGTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTLVGEP*LPLLSF
Trigger: GAAGGACAACAGTGGCAGCCACGGCTCCCCCACCAG...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAGAAGAGGCGCTGAGCTaGGATCTGGAAGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTEEALS*DLEAPA
Trigger: CGCTGGCGCTTCCAGATCCCAGCTCAGCGCCTCTTC...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCCCCCCAGGGAGCCTTTaGGCGCCAGCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGPPGSL*APAPGW
Trigger: CCATCCTGGTGCTGGCGCCCAAAGGCTCCCTGGGGG...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGTGGGAGATAGAGACCTaGACGAGGCAAAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGWEIET*TRQRTV
Trigger: TACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCA...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCAGGTGGGCAGGTCTTTaGGAGATAGAGACCTGGACG +
Preference number: 4 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLRWAGL*EIETWT
Trigger: CGTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCT...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTTCCCTCACCGAGGTATaGCCTTGCCGGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLSLTEV*PCRPAA
Trigger: AGCAGCGGGCCGGCAAGGCCATACCTCGGTGAGGGA...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCAGGGCCCTCAGGCCATaGTGGTTTATTGATGCACGT +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLARALRP*WFIDAR
Trigger: ACGTGCATCAATAAACCACCATGGCCTGAGGGCCCT...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGACTCCGTGTTGCAGCTaGAGAAGACCCCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLTPCCS*RRPRGA
Trigger: TGCTCCACGGGGTCTTCTTCAGCTGCAACACGGAGT...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCCATCTCTGTCACCTCTaGGAAAGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAHLCHL*ESHCEA
Trigger: AGCCTCACAGTGACTTTCTCAGAGGTGACAGAGATG...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGCTCCTGTCTGGCTGTaGAGCGCGTCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCAPVWL*SASLLP
Trigger: GGGCAGCAGCGACGCGCTGCACAGCCAGACAGGAGC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCACAGGGAGAGACCTCTaGGTGGATGAGCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGTGRDL*VDELPG
Trigger: GCCGGGGAGCTCATCCACGCAGAGGTCTCTCCCTGT...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACTGGACAGCAGCTCCATaGTCCCGTCAGGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHWTAAP*SRQGCL
Trigger: GAGACAACCCTGACGGGAGCATGGAGCTGCTGTCCA...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAGCGGAGCATGCGGCCTaGGATCTGCTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTAEHAA*DLLSFL
Trigger: GAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGC...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAGCAAGGAGAAGGTATaGTGGGGTATGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVSKEKV*WGMEGR
Trigger: CCTTCCTTCCATACCCCAGCATACCTTCTCCTTGCT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGAGCTGGCCACACAACTaGCCCTGGCTACAGATAGGT +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRSWPHN*PWLQIG
Trigger: ACCTATCTGTAGCCAGGGGCAGTTGTGTGGCCAGCT...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CAGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCGAAATCAAAGCAGCGTaGAGGAGAGAGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLPEPGLPTSTFRSSLPREIKAA*RRERQR
Trigger: TCTCTGCCTCTCTCTCCTCCACGCTGCTTTGATTTC...GCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGGGCTCAGGAACCAGTaGCCTCTCACCGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGGLRNQ*PLTVMG
Trigger: GCCCATGACGGTGAGAGGCCACTGGTTCCTGAGCCC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTGCGCCAGCACCAGGATaGCGTAGTGGTAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLAPAPG*RSGRPC
Trigger: ACACGGCCTACCACTACGCCATCCTGGTGCTGGCGC...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTAAGGTATGCTGGGGTATaGAAGGAAGGAACATCCGAC +
Preference number: 4 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVRYAGV*KEGTSD
Trigger: GTCGGATGTTCCTTCCTTCCATACCCCAGCATACCT...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTAGGAAGGGGCACCTCTaGGTCTCAGGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLRKGHL*VSGVSS
Trigger: GGAGGAGACCCCTGAGACCCAGAGGTGCCCCTTCCT...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCCAGGGTTGTCTCCTGTaGGGACTGGCTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGQGCLL*GLAPLG
Trigger: GCCCAGTGGAGCCAGTCCCCACAGGAGACAACCCTG...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGGACGTCCCGGTGCTTaGACTTGTTGGAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAGRPGA*TCWNSY
Trigger: ATAAGAATTCCAACAAGTTCAAGCACCGGGACGTCC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTGGTTGGTGCTGGGATTaGAGAGGCGCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLGWCWD*RGAELG
Trigger: TCCCAGCTCAGCGCCTCTTCAATCCCAGCACCAACC...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCCCTAGCGGCCCACGCTaGTGTTGCAGGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGPSGPR*CCRSCS
Trigger: GCTGCAAGACCTGCAACATCAGCGTGGGCCGCTAGG...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGGCCAACTACAGAGGCTaGGAAGCCTTTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRANYRG*EAFPCP
Trigger: TGGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGC...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCAGCCTCCAGGCCTCCTaGCTCATCCCAGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGSLQAS*LIPERQ
Trigger: CTGTCTCTCTGGGATGAGTCAGGAGGCCTGGAGGCT...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGGCCATGGTGGTTTATTaGTGCACGTCGCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRAMVVY*CTSQAQ
Trigger: CTGTGCTTGCGACGTGCATCAATAAACCACCATGGC...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTTGCTCCTCTCCCGGCTaGCAAGGAGGCTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLCSSPG*QGGCFH
Trigger: ATGGAAGCAGCCTCCTTGGCAGCCGGGAGAGGAGCA...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGCAGTGGCGTGCGCTTaGTCCTCTCCCGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCAVACA*SSPGCQ
Trigger: TTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAATCGCTCTGCTTCACTaGCGTCTGCACGGCCACACT +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTIALLH*RLHGHT
Trigger: AGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGAT...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACACCCCATCCTCCACGCTaGAGGTCAGGAACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTPHPPR*RSGTCC
Trigger: GCAACAAGTTCCTGACCTGCAGCGTGGAGGATGGGG...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCTTGCCGGCCCGCTGCTaGTTCCGTCCTTCATCACGA +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGLPARC*FRPSSR
Trigger: TCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAA...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAAGCAGCGGCACTGCCTTaGCCACGAGCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQAAALP*PRAWWG
Trigger: TCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGC...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGCAGCGGCACTGCCTTaGCCACGAGCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCAAALP*PRAWWG
Trigger: TCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACATCCCGCAGTGGGTCCTaGCATGCTGGAAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTSRSGS*HAGSTP
Trigger: AGGAGTACTTCCAGCATGCCAGGACCCACTGCGGGA...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCGCCAGGGAGTCACGGTaGTGCAGGAGACTATTTATA +
Preference number: 4 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSARESR*CRRLFI
Trigger: TATAAATAGTCTCCTGCACCACCGTGACTCCCTGGC...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCAAGGAGAAGGTATGCTaGGGTATGGAAGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAKEKVC*GMEGRN
Trigger: GTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTT...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCCACACAACTGCCCCTaGCTACAGATAGGTGACCGT +
Preference number: 4 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLPHNCP*LQIGDR
Trigger: ACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGG...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
3UTR CAA 72 bp AGAGACCCAGCTCAGCAGGGAGGGGGCATTCTGTGGTaGGCCCTGAGTGGGGTGAGTGGGACTAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: RDPAQQGGGILW*ALSGVSGTKKD
Trigger: ATCTTTCTTAGTCCCACTCACCCCACTCAGGGCCAACCACAGAATGCCCCCTCCCTGCTGAGCTGGGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCTGGACAGCAGCTCCATaGTCCCGTCAGGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGWTAAP*SRQGCL
Trigger: GAGACAACCCTGACGGGAGCATGGAGCTGCTGTCCA...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCTGGGGGAGCCGTGGCTaGCACTGTTGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGWGSRG*HCCPSG
Trigger: ACCTGAAGGACAACAGTGGCAGCCACGGCTCCCCCA...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTCCCCATCCTCCACGCTaGAGGTCAGGAACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLPHPPR*RSGTCC
Trigger: GCAACAAGTTCCTGACCTGCAGCGTGGAGGATGGGG...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCGCCCCACAGCTCTCTaGATCTCTTCTGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRRPTAL*ISSGGS
Trigger: GCTGCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCAGCAAGGAGAAGGTATaGTGGGGTATGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGSKEKV*WGMEGR
Trigger: CCTTCCTTCCATACCCCAGCATACCTTCTCCTTGCT...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCTCAACCCCAGTGGCTaGTGTCTCAGACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRLNPSG*CLRPLH
Trigger: GTGCAGGGGTCTGAGACAGCAGCCACTGGGGTTGAG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCTCACGAAAATCCAGCTaGTCATCCATCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLASRKSS*SSIISV
Trigger: GACAGAGATGATGGATGAGCAGCTGGATTTTCGTGA...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAAGCCTTGCCGGCCCGCTaGTGCTTCCGTCCTTCATCA +
Preference number: 4 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQALPAR*CFRPSS
Trigger: TGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGC...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCACCGAGGTATGGCCTTaGCGGCCCGCTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTTEVWP*RPAAAS
Trigger: GGAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGT...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCCAGCCAGCTCCTGTCTaGCTGTGCAGCGCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTQPAPV*LCSASL
Trigger: CAGCGACGCGCTGCACAGCCAGACAGGAGCTGGCTG...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCAGGGTTGTCTCCTGTaGGGACTGCTGTGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRQGCLL*GLLWSG
Trigger: TCCGCTCCACAGCAGTCCCCACAGGAGACAACCCTG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGGGCTCAGGAACCAGTaGCCTCTCACCGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCGLRNQ*PLTVMG
Trigger: GCCCATGACGGTGAGAGGCCACTGGTTCCTGAGCCC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTTCCCGCAGTGGGTCCTaGCATGCTGGAAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLSRSGS*HAGSTP
Trigger: AGGAGTACTTCCAGCATGCCAGGACCCACTGCGGGA...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTAGCATGTTCCCGCAGTaGGTCCTGGCATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLSMFPQ*VLACWK
Trigger: CTTCCAGCATGCCAGGACCCACTGCGGGAACATGCT...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTGACAGACTCATGAGCTaGTGCCCACTGATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLDRLMS*CPLISP
Trigger: GGGGGAGATCAGTGGGCACCAGCTCATGAGTCTGTC...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGCCAGGGAGTCACGGTaGTGCAGGAGACTATTTATA +
Preference number: 4 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGARESR*CRRLFI
Trigger: TATAAATAGTCTCCTGCACCACCGTGACTCCCTGGC...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGTCCCGGTGGGCAGGTaGAGAAGGAGGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCVPVGR*RRRDSS
Trigger: AGAGCTGTCCCTCCTTCTCCACCTGCCCACCGGGAC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCTCCCGGCCAGCAGGGTaGCAGGAGAGCAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTSRPAG*QESRQS
Trigger: GCTCTGTCTGCTCTCCTGCCACCCTGCTGGCCGGGA...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGGACGATGTTCCCAGCTaGGCAGCGCAAGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRDDVPS*AAQEER
Trigger: CCTCTCTTCTTGCGCTGCTCAGCTGGGAACATCGTC...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCGAGGCTTGGGGCAGGTaGCAGCCAAGAGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTEAWGR*QPRAHR
Trigger: CCTGTGAGCTCTTGGCTGTCACCTGCCCCAAGCCTC...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACACTCCTTGTGATGGTTaGGGTAGAAGACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHTPCDG*GRRRRS
Trigger: GCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGT...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCATGAGGTCCTGGGCGTaGCGGAAGACCAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTMRSWA*RKTSSP
Trigger: TGGGGAGCTGGTCTTCCGCCACGCCCAGGACCTCAT...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGTGCAGGTCTTGCAGCTaGGGTCCTTCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRCRSCS*GPSWHR
Trigger: CCGATGCCAAGAAGGACCCCAGCTGCAAGACCTGCA...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAACCATGTCCACCAGGCTaGGTGTGGGCCACACTTACC +
Preference number: 4 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQPCPPG*VWATLT
Trigger: GGTAAGTGTGGCCCACACCCAGCCTGGTGGACATGG...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGCCAACTACAGAGGCTaGGAAGCCTTTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGANYRG*EAFPCP
Trigger: TGGACATGGAAAGGCTTCTCAGCCTCTGTAGTTGGC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCTGAGAAAGTCACTGTaGGGCTGCACTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRLRKSL*GCTLLC
Trigger: GCAGAGGAGAGTGCAGCCTCACAGTGACTTTCTCAG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTCTGGCTACAGATAGGTaGCCGTTGTCCACCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCLATDR*PLSTCP
Trigger: GGGACAGGTGGACAACGGTCACCTATCTGTAGCCAG...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGTGGGGACGTCCCGGTaGTTGAACTTGTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGVGTSR*LNLLEF
Trigger: GAATTCCAACAAGTTCAAGCACCGGGACGTCCCCAC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTTACTCCCCATCGCTCTaGTTCACTGCCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCYSPSL*FTAVCT
Trigger: CGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTA...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCTTGATCTCAATGCTGTaGGGCGTGGACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGLISML*GVDSSS
Trigger: GGAGCTGCTGTCCACGCCCCACAGCATTGAGATCAA...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCCTGAAGAAGACCCCGTaGAGCATACCGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTLKKTP*SIPLVG
Trigger: CCCCACCAGCGGTATGCTCCACGGGGTCTTCTTCAG...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGACAGACTCATGAGCTaGTGCCCACTGATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCDRLMS*CPLISP
Trigger: GGGGGAGATCAGTGGGCACCAGCTCATGAGTCTGTC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACTGGGAGATAGAGACCTaGACGAGGCAAAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHWEIET*TRQRTV
Trigger: TACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCA...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCAGGTGGGCAGGTCTTTaGGAGATAGAGACCTGGACG +
Preference number: 4 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGRWAGL*EIETWT
Trigger: CGTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCT...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAAAGGAAGAGGGTTCTTTaGGGCAAGGAGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQRKRVL*GKEQPG
Trigger: CCCTGGCTGCTCCTTGCCCCAAAGAACCCTCTTCCT...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCCCACACAACTGCCCCTaGCTACAGATAGGTGACCGT +
Preference number: 4 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGPHNCP*LQIGDR
Trigger: ACGGTCACCTATCTGTAGCCAGGGGCAGTTGTGTGG...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAGGACGTCCCGGTGCTTaGACTTGTTGGAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: SRALRPWWFIDARRKHSTGRPGA*TCWNSY
Trigger: ATAAGAATTCCAACAAGTTCAAGCACCGGGACGTCC...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR TCA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCCATCTCTGTCACCTCTaGGAAAGTCACTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSGTKKDRPTALCISSGGHLCHL*ESHCEA
Trigger: AGCCTCACAGTGACTTTCTCAGAGGTGACAGAGATG...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCAGACTCATGAGCTGGTaGCCACTGATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTRLMSW*PLISPR
Trigger: CCTGGGGGAGATCAGTGGGCACCAGCTCATGAGTCT...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR GCA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGGGAGTCACGGTGGTaGAGGAGACTATTTATAGAA +
Preference number: 4 (lower is better)
Translates to: ETSRALRPWWFIDARRKHRESRW*RRLFIE
Trigger: TTCTATAAATAGTCTCCTGCACCACCGTGACTCCCT...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp GGAAGTTCTCCAGAAGTCCAGCCCAGCTGCCAACTACAGAGGCTGAGAAGCCTTAAGGAGAAGGTATGCTaGGGTATGGAAGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSSPEVQPSCQLQRLRSLKEKVC*GMEGRN
Trigger: GTTCCTTCCTTCCATACCCCAGCATACCTTCTCCTT...AAGGCTTCTCAGCCTCTGTAGTTGGCAGCTGGGCTGGACTTCTGGAGAACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCGCCCTCAGGCCATGGTaGTTTATTGATGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTALRPW*FIDARR
Trigger: GCGACGTGCATCAATAAACCACCATGGCCTGAGGGC...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTAGGTATGCTGGGGTATaGAAGGAAGGAACATCCGAC +
Preference number: 4 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCRYAGV*KEGTSD
Trigger: GTCGGATGTTCCTTCCTTCCATACCCCAGCATACCT...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CCA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCGAAATCAAAGCAGCGTaGAGGAGAGAGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTEIKAA*RRERQR
Trigger: TCTCTGCCTCTCTCTCCTCCACGCTGCTTTGATTTC...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 90 bp GGGGACAGCAGCCGGACGCCTGGGTCACGGGCAGTGGCGTGCGCTTaGTCCTCTCCCGGCTGCCAAGGAGGCTGCTTCCATGCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GDSSRTPGSRAVACA*SSPGCQGGCFHAPQ
Trigger: CTGCGGGGCATGGAAGCAGCCTCCTTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTGTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 90 bp CCGGCAGGGGACAGCAGCCGGACGCCTGGGTCACGGGCAGTGGCGTaGGCTTGCTCCTCTCCCGGCTGCCAAGGAGGCTGCTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: PAGDSSRTPGSRAVA*ACSSPGCQGGCFHA
Trigger: GGCATGGAAGCAGCCTCCTTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTGTCCCCTGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS CCA 90 bp CTCTGCGTGGATGAGCTCCCCGGCAGGGGACAGCAGCCGGACGCCTaGGTCACGGGCAGTGGCGTGCGCTTGCTCCTCTCCCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LCVDELPGRGQQPDA*VTGSGVRLLLSRLP
Trigger: TGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTGTCCCCTGCCGGGGAGCTCATCCACGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp CGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGTTCCATGCCAGGCCGGCAGTGGCGTGCGCTaGCTCCTCTCCCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RGAGARGTAYRSHVPCQAGSGVR*LLSRLP
Trigger: TGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCC...GGCCTGGCATGGAACGTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 90 bp ACGCCTGGGTCACGGGCAGTGGCGTGCGCTTGCTCCTCTCCCGGCTaGCAAGGAGGCTGCTTCCATGCCCCGCAGCCAGCTCCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TPGSRAVACACSSPG*QGGCFHAPQPAPVW
Trigger: CCAGACAGGAGCTGGCTGCGGGGCATGGAAGCAGCCTCCTTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS CCA 90 bp GGAGGGGCAGGCGGTCGCGGCAGAAGCGGTCCCCCAGGGAGCCTTTaGGCGCCAGCACCAGGATGGCGTAGTGGTAGGCCGTGTACATGC +
Preference number: 5 (lower is better)
Translates to: GGAGGRGRSGPPGSL*APAPGWRSGRPCTC
Trigger: GCATGTACACGGCCTACCACTACGCCATCCTGGTGCTGGCGCCCAAAGGCTCCCTGGGGGACCGCTTCTGCCGCGACCGCCTGCCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS GCA 90 bp GGGGCTCAGGAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTaGCTTGGCCACGAGCTTGGTGGGGACGTCCCACGGAGGACTCTC +
Preference number: 5 (lower is better)
Translates to: GAQEPVASHRHGQRH*LGHELGGDVPRRTL
Trigger: GAGAGTCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS CCA 90 bp GGCTGCCAAGGAGGCTGCTTCCATGCCCCGCAGCCAGCTCCTGTCTaGCTGTGCAGCGCGTCGCTGCTGCCCCTGGTGAGACGATGTTCC +
Preference number: 5 (lower is better)
Translates to: GCQGGCFHAPQPAPV*LCSASLLPLVRRCS
Trigger: GGAACATCGTCTCACCAGGGGCAGCAGCGACGCGCTGCACAGCCAGACAGGAGCTGGCTGCGGGGCATGGAAGCAGCCTCCTTGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS CCA 90 bp TGTACTCCGTGCGGGGGCTCAGGAACCAGTGGCCTCTCACCGTCATaGGCAGCGGCACTGCCTTGGCCACGAGCTTGGTGGGGACGTCCC +
Preference number: 5 (lower is better)
Translates to: CTPCGGSGTSGLSPS*AAALPWPRAWWGRP
Trigger: GGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGCCCCCGCACGGAGTACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS CCA 90 bp GTCTGCACGGCCACACTGTACTCCGTGCGGGGGCTCAGGAACCAGTaGCCTCTCACCGTCATGGGCAGCGGCACTGCCTTGGCCACGAGC +
Preference number: 5 (lower is better)
Translates to: VCTATLYSVRGLRNQ*PLTVMGSGTALATS
Trigger: GCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGCCCCCGCACGGAGTACAGTGTGGCCGTGCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS-3UTR CAA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCGCCTTGGCCACGAGCTaGGTGGGGACGTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLAALATS*VGTSRC
Trigger: GCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGC...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS TCA 90 bp GGGCTCTTTGCTCTCCTCGGAGGGGTCTGCAGAGCAGACGGCACCTaGCAGGTGGCAGAGGCAGTGGGAATGCTGCAAAGCCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GLFALLGGVCRADGT*QVAEAVGMLQSRAG
Trigger: CCCCGCCCGGCTTTGCAGCATTCCCACTGCCTCTGCCACCTGTCAGGTGCCGTCTGCTCTGCAGACCCCTCCGAGGAGAGCAAAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518274.1
CDS GCA 90 bp TCCACCGTCTCGCTCCAGCCGGACACCAGGTACTCCCCATCGCTCTaGTTCACTGCCGTCTGCACGGCCACACTGTACTCCGTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: STVSLQPDTRYSPSL*FTAVCTATLYSVRG
Trigger: CCCCCGCACGGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTACCTGGTGTCCGGCTGGAGCGAGACGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS CCA 90 bp GGAGGAGAGGCCCGGCGGGTCCAGCCGGGAGCCCGCGCCCATACCTaGCATGCTGGAAGTACTCCTTGTGATGGTTGCGGTAGAAGACGG +
Preference number: 5 (lower is better)
Translates to: GGEARRVQPGARAHT*HAGSTPCDGCGRRR
Trigger: CCGTCTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGTATGGGCGCGGGCTCCCGGCTGGACCCGCCGGGCCTCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS-3UTR CAA 90 bp GGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCGCCTTGGCCACGAGCTaGGTGGGGACGTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: GLAGPLLLPSFITKIQLLALATS*VGTSRC
Trigger: GCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGC...GAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGATGCTCCCGTCAGGGTaGTCTCCTGTGGGGACTGGC +
Preference number: 5 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGMLPSG*SPVGTG
Trigger: GCCAGTCCCCACAGGAGACAACCCTGACGGGAGCAT...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454243.7
CDS GCA 90 bp GGGGCTCAGGAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTaGCTTGGCCACGAGCTTGGTGGGGACGTCCCGGTGCTTGAACTT +
Preference number: 5 (lower is better)
Translates to: GAQEPVASHRHGQRH*LGHELGGDVPVLEL
Trigger: AAGTTCAAGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
CDS GCA 90 bp CAGCCGGACACCAGGTACTCCCCATCGCTCTGCTTCACTGCCGTCTaGACGGCCACACTGTACTCCGTGCGGGGGCTCAGGAACCAGTGG +
Preference number: 5 (lower is better)
Translates to: QPDTRYSPSLCFTAV*TATLYSVRGLRNQW
Trigger: CCACTGGTTCCTGAGCCCCCGCACGGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTACCTGGTGTCCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS GCA 90 bp CTCGCTCCAGCCGGACACCAGGTACTCCCCATCGCTCTGCTTCACTaGCGTCTGCACGGCCACACTGTACTCCGTGCGGGGGCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: LAPAGHQVLPIALLH*RLHGHTVLRAGAQE
Trigger: TTCCTGAGCCCCCGCACGGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTACCTGGTGTCCGGCTGGAGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS CCA 90 bp AGCTCACAGGTGCCAGGGCCCTCGGATTCAGGCCTCTCTCCTCACTaGGGTCAGCAAGCGTTGCCGCGGTACATGGCTGGCTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: SSQVPGPSDSGLSPH*GQQALPRYMAGSTG
Trigger: CCCAGTGGAGCCAGCCATGTACCGCGGCAACGCTTGCTGACCCCAGTGAGGAGAGAGGCCTGAATCCGAGGGCCCTGGCACCTGTGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS CCA 90 bp GTCCGCAAAGTAGAGGTTGGTGCTGGGATTGAAGAGGCGCTGAGCTaGGATCTGGAAGCGCCAGCGGCCGTAGGGGGAGTCCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: VRKVEVGAGIEEALS*DLEAPAAVGGVLRG
Trigger: CCCCCGCAGGACTCCCCCTACGGCCGCTGGCGCTTCCAGATCCCAGCTCAGCGCCTCTTCAATCCCAGCACCAACCTCTACTTTGCGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CCA 90 bp TCAGGAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTGCCTTaGCCACGAGCTTGGTGGGGACGTCCCACGGAGGACTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: SGTSGLSPSWAAALP*PRAWWGRPTEDSLP
Trigger: TGGGAGAGAGTCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS-3UTR CAA 90 bp GGGAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTATGGGGTCAGCAAGCGTaGCCGCGGTACATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GRGGAAEGPQSRSRMGTVWGQQA*PRYMAG
Trigger: GCCAGCCATGTACCGCGGCAACGCTTGCTGACCCCA...TACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CAA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGGCAGCGGCACTGCCTaGGCCACGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ETSRALRPWWFIDARRKHGSGTA*ATSLVG
Trigger: CCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAGGGGGCTGGCCCGTGTaGAACTCCGTGTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTGGWPV*NSVLQL
Trigger: CAGCTGCAACACGGAGTTCAACACGGGCCAGCCCCC...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp CTGATGTCACCTCCATCATCCCCCAAACAGCCGGCTGCTGCTGTCAGCCCCTCCCGGCCCACGCTGATGTaGCAGGTCTTGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LMSPPSSPKQPAAAVSPSRPTLM*QVLQLG
Trigger: CCCCAGCTGCAAGACCTGCAACATCAGCGTGGGCCG...GGAGGGGCTGACAGCAGCAGCCGGCTGTTTGGGGGATGATGGAGGTGACATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS TCA 90 bp GGACAGCAGCTCCATGCTCCCGTCAGGGTTGTCTCCTGTGGGGACTaGGGAGGAGGGAAAGGGTCAGTACATCCCTTGACCCCGGCGAGC +
Preference number: 5 (lower is better)
Translates to: GQQLHAPVRVVSCGD*GGGKGSVHPLTPAS
Trigger: GCTCGCCGGGGTCAAGGGATGTACTGACCCTTTCCCTCCTCCTCAGTCCCCACAGGAGACAACCCTGACGGGAGCATGGAGCTGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518274.1
CDS GCA 90 bp GGAAGACCAGCTCCCCATCCTCCACGCTGCAGGTCAGGAACTTGTTaGAAGCAATGTCCAGGAGGGGCAGGCGGTCGCGGCAGAAGCGGT +
Preference number: 5 (lower is better)
Translates to: GRPAPHPPRCRSGTC*KQCPGGAGGRGRSG
Trigger: ACCGCTTCTGCCGCGACCGCCTGCCCCTCCTGGACATTGCTTGCAACAAGTTCCTGACCTGCAGCGTGGAGGATGGGGAGCTGGTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CCA 90 bp GGGGCGTGGACAGCAGCTCCATGCTCCCGTCAGGGTTGTCTCCTGTaGGGACTGAGGAGGAGGGAAAGGGTCAGTACATCCCTTGACCCC +
Preference number: 5 (lower is better)
Translates to: GAWTAAPCSRQGCLL*GLRRRERVSTSLDP
Trigger: GGGGTCAAGGGATGTACTGACCCTTTCCCTCCTCCTCAGTCCCCACAGGAGACAACCCTGACGGGAGCATGGAGCTGCTGTCCACGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518274.1
CDS-3UTR CAA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACTCGCAGGTGATGTTGTaGATCTCAATGCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHSQVML*ISMLWG
Trigger: GCCCCACAGCATTGAGATCAACAACATCACCTGCGA...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACAGGCAGCGGCACTGCCTaGGCCACGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SRALRPWWFIDARRKHSTGSGTA*ATSLVG
Trigger: CCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCC...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGCTGCAGGTCAGGAACTaGTTGCAAGCAATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWLQVRN*LQAMSR
Trigger: CCTGGACATTGCTTGCAACAAGTTCCTGACCTGCAG...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GAGAGGCGGAGCAGCAGAGGGTCCACAGTCCAGGTCACGCATGGGCACAGTACAAGCTACCCATGGGCTTaGGCCCAGAGGGGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ERRSSRGSTVQVTHGHSTSYPWA*AQRGFP
Trigger: AGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCT...TGTACTGTGCCCATGCGTGACCTGGACTGTGGACCCTCTGCTGCTCCGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGGCAGTGGCGTGCGCTaGCTCCTCTCCCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: VSGTKKDRPTALCISSGGGSGVR*LLSRLP
Trigger: TGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGAGTCGCAGGTGATGTaGTTGATCTCAATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHESQVM*LISMLW
Trigger: CCACAGCATTGAGATCAACAACATCACCTGCGACTC...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AAGTGCACAGCTGGGCGGGGTGCCGGGGCCCGCGGGACAGCTTACAGGTCTCACGGGACGTCCCGGTGCTaGAACTTGTTGGAATTCTTA +
Preference number: 5 (lower is better)
Translates to: KCTAGRGAGARGTAYRSHGTSRC*NLLEFL
Trigger: TAAGAATTCCAACAAGTTCAAGCACCGGGACGTCCC...GTGAGACCTGTAAGCTGTCCCGCGGGCCCCGGCACCCCGCCCAGCTGTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGCAGGTCAGGAACTTGTaGCAAGCAATGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGQVRNL*QAMSRR
Trigger: CCTCCTGGACATTGCTTGCAACAAGTTCCTGACCTG...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGGAGGACCACCGTCTGTaGCCTCCAATGCCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGREDHRL*PPMPRG
Trigger: GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTC...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGGAGGTGGGCAGGTCTTaGGGAGATAGAGACCTGGAC +
Preference number: 5 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGEVGRS*GDRDLD
Trigger: GTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCTC...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACAGCACACACCGAGGTATGGCCTaGCCGGCCCGCTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SRALRPWWFIDARRKHSTHRGMA*PARCCF
Trigger: GAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTG...TGTGCTGTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 90 bp GCCCGCGCCCATACCTGGCATGCTGGAAGTACTCCTTGTGATGGTTaGGGTAGAAGACGGAGAAGCGGAGCATGCGGCCTGCGATCTGCT +
Preference number: 5 (lower is better)
Translates to: ARAHTWHAGSTPCDG*GRRRRSGACGLRSA
Trigger: AGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGTATGGGCGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS-3UTR CAA 90 bp ACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGAGGGGAGGATGCTCCCGTCAGGGTaGTCTCCTGTGGGGACTGCT +
Preference number: 5 (lower is better)
Translates to: TYQEDHRLLPPMPRGEGRMLPSG*SPVGTA
Trigger: AGCAGTCCCCACAGGAGACAACCCTGACGGGAGCAT...CCTCCCCTCGCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS-3UTR CAA 90 bp TGGCACCATGGCAGAGCGAGTGAGCAAAGTGCACAGCTGGGCGGGGTGCCGGGGGGGACGTCCCGGTGCTaGAACTTGTTGGAATTCTTA +
Preference number: 5 (lower is better)
Translates to: WHHGRASEQSAQLGGVPGGTSRC*NLLEFL
Trigger: TAAGAATTCCAACAAGTTCAAGCACCGGGACGTCCC...CCCCGGCACCCCGCCCAGCTGTGCACTTTGCTCACTCGCTCTGCCATGGTGCCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AGCTCCCTGAACCTGGGCTACCCACCTCCACCTTCCGCTCATCTCTCCCTCGCCCTGATGTTGCAGGTCTaGCAGCTGGGGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SSLNLGYPPPPSAHLSLALMLQV*QLGSFL
Trigger: CAAGAAGGACCCCAGCTGCAAGACCTGCAACATCAG...GGCGAGGGAGAGATGAGCGGAAGGTGGAGGTGGGTAGCCCAGGTTCAGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGGGGGGCATTCTGTGGTaGGCCCTGAGTGGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLGGILW*ALSGVS
Trigger: ACTCACCCCACTCAGGGCCAACCACAGAATGCCCCC...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 90 bp TCCCGCAGTGGGTCCTGGCATGCTGGAAGTACTCCTTGTGATGGTTaGGGTAGAAGACGGAGAAGCGGAGCATGCGGCCTGCGATCTGCT +
Preference number: 5 (lower is better)
Translates to: SRSGSWHAGSTPCDG*GRRRRSGACGLRSA
Trigger: AGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGACCCACTGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS-3UTR CAA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCCAGCTGGGGTCCTTCTaGGCATCGGCAGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGQLGSF*ASAVDR
Trigger: TCTGTCTACTGCCGATGCCAAGAAGGACCCCAGCTG...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCACCGAGGTATGGCCTaGCCGGCCCGCTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRHRGMA*PARCCF
Trigger: GAAGCAGCAGCGGGCCGGCAAGGCCATACCTCGGTG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS TCA 90 bp CTGAGCCCAATCCCCAAAGTAGCAGTCTCTTCAGAGCCAGCCTGGTaGCGTCAGGACATGTCAACCCTAGAGGAGGGACTGGCAGCCACG +
Preference number: 5 (lower is better)
Translates to: LSPIPKVAVSSEPAW*RQDMSTLEEGLAAT
Trigger: CGTGGCTGCCAGTCCCTCCTCTAGGGTTGACATGTCCTGACGTCACCAGGCTGGCTCTGAAGAGACTGCTACTTTGGGGATTGGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS-3UTR CAA 90 bp TTCTGGAGGCAGCCAAGCTACCCATGGGCTTTGGCCCAGAGGGGCTTCCCTGGGGAGTCGCAGGTGATGTaGTTGATCTCAATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: FWRQPSYPWALAQRGFPGESQVM*LISMLW
Trigger: CCACAGCATTGAGATCAACAACATCACCTGCGACTC...CCCAGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCTTGGCTGCCTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GCCCCAGCAGAGCATGAGGCGGCCCACTCCCAGCTGAGGAAGGGGCACCTCTGGCGGTGCTTGAACTTGTaGGAATTCTTATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: APAEHEAAHSQLRKGHLWRCLNL*EFLFSF
Trigger: GAAGGAGAATAAGAATTCCAACAAGTTCAAGCACCG...CCAGAGGTGCCCCTTCCTCAGCTGGGAGTGGGCCGCCTCATGCTCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 90 bp CTTGTGATGGTTGCGGTAGAAGACGGAGAAGCGGAGCATGCGGCCTaGGATCTGCTCAGCTTTCTCCTGAAGCTGAGCCAGGTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LVMVAVEDGEAEHAA*DLLSFLLKLSQVLL
Trigger: AAGGAGCACCTGGCTCAGCTTCAGGAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000522869.5
ENST00000523252.1
CDS-3UTR CAA 90 bp GAGACGAGCAGGGCCCTCAGGCCATGGTGGTTTATTGATGCACGTCGCAAGCACGTGTTGAACTCCGTGTaGCAGCTGAAGAAGACCCCG +
Preference number: 5 (lower is better)
Translates to: ETSRALRPWWFIDARRKHVLNSV*QLKKTP
Trigger: CGGGGTCTTCTTCAGCTGCAACACGGAGTTCAACAC...GTGCTTGCGACGTGCATCAATAAACCACCATGGCCTGAGGGCCCTGCTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGGGGGCTGGCCCGTGTaGAACTCCGTGTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCGGWPV*NSVLQL
Trigger: CAGCTGCAACACGGAGTTCAACACGGGCCAGCCCCC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAACGGCCCACGCTGATGTaGCAGGTCTTGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQRPTLM*QVLQLG
Trigger: CCCCAGCTGCAAGACCTGCAACATCAGCGTGGGCCG...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCAGCTACCCATGGGCTTaGGCCCAGAGGGGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGSYPWA*AQRGFP
Trigger: AGGGAAGCCCCTCTGGGCCAAAGCCCATGGGTAGCT...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS TCA 90 bp TCTCCTGTGGGGACTGAGGAGGAGGGAAAGGGTCAGTACATCCCTTaGCCCCGGCGAGCTTTCTGGAATGTCCTCCTCCCAATATCCCTT +
Preference number: 5 (lower is better)
Translates to: SPVGTEEEGKGQYIP*PRRAFWNVLLPISL
Trigger: AAGGGATATTGGGAGGAGGACATTCCAGAAAGCTCGCCGGGGTCAAGGGATGTACTGACCCTTTCCCTCCTCCTCAGTCCCCACAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518274.1
CDS GCA 90 bp AGTACTCCTTGTGATGGTTGCGGTAGAAGACGGAGAAGCGGAGCATaGGGCCTGCGATCTGCTCAGCTTTCTCCTGAAGCTGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: STPCDGCGRRRRSGA*GLRSAQLSPEAEPG
Trigger: ACCTGGCTCAGCTTCAGGAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000522869.5
ENST00000523252.1
CDS-3UTR CAA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGAGGTGGGCAGGTCTTaGGGAGATAGAGACCTGGAC +
Preference number: 5 (lower is better)
Translates to: VSGTKKDRPTALCISSGGEVGRS*GDRDLD
Trigger: GTCCAGGTCTCTATCTCCCAAAGACCTGCCCACCTC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTGGGGGCATTCTGTGGTaGGCCCTGAGTGGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCGGILW*ALSGVS
Trigger: ACTCACCCCACTCAGGGCCAACCACAGAATGCCCCC...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGGGCCATGGTGGTTTATaGATGCACGTCGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLGHGGL*MHVAST
Trigger: TGTGCTTGCGACGTGCATCAATAAACCACCATGGCC...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GTGAGTGGGACTAAGAAAGATCGCCCCACAGCTCTCTGCATCTCTTCTGGAGGCGTGTTGAACTCCGTGTaGCAGCTGAAGAAGACCCCG +
Preference number: 5 (lower is better)
Translates to: VSGTKKDRPTALCISSGGVLNSV*QLKKTP
Trigger: CGGGGTCTTCTTCAGCTGCAACACGGAGTTCAACAC...GCCTCCAGAAGAGATGCAGAGAGCTGTGGGGCGATCTTTCTTAGTCCCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCGGCTCTCTGTTTGCTTaGTTGATTGTAGGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGGSLFA*LIVGSP
Trigger: TGGACTCCCTACAATCAACAAAGCAAACAGAGAGCC...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS TCA 90 bp TCTAAGGGGTTCACTGACATGTCTCCCTGGAGGGAGCACCCAGTTTaGAAACCGACGAGCTGGGTGCTTCCTCGAACCCTTTGTGATCAG +
Preference number: 5 (lower is better)
Translates to: SKGFTDMSPWREHPV*KPTSWVLPRTLCDQ
Trigger: CTGATCACAAAGGGTTCGAGGAAGCACCCAGCTCGTCGGTTTTCAAACTGGGTGCTCCCTCCAGGGAGACATGTCAGTGAACCCCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS-3UTR CAA 90 bp GTGGGCCACACTTACCAAGAGGACCACCGTCTGTTGCCTCCAATGCCAAGGGGCTCCCGGTGCTTGAACTaGTTGGAATTCTTATTCTCC +
Preference number: 5 (lower is better)
Translates to: VGHTYQEDHRLLPPMPRGSRCLN*LEFLFS
Trigger: GGAGAATAAGAATTCCAACAAGTTCAAGCACCGGGA...GCCCCTTGGCATTGGAGGCAACAGACGGTGGTCCTCTTGGTAAGTGTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp AGCCAGGGAGTCACGGTGGTGCAGGAGACTATTTATAGAAGGAAGGGATCCAGGCTGATGTTGCAGGTCTaGCAGCTGGGGTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SQGVTVVQETIYRRKGSRLMLQV*QLGSFL
Trigger: CAAGAAGGACCCCAGCTGCAAGACCTGCAACATCAG...CCTGGATCCCTTCCTTCTATAAATAGTCTCCTGCACCACCGTGACTCCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCCTGCAGGTCAGGAACTaGTTGCAAGCAATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGLQVRN*LQAMSR
Trigger: CCTGGACATTGCTTGCAACAAGTTCCTGACCTGCAG...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TGCTTCCGTCCTTCATCACGAAAATCCAGCTGCTCATCCATCATCTCTGTCACCCAGCTGGGGTCCTTCTaGGCATCGGCAGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: CFRPSSRKSSCSSIISVTQLGSF*ASAVDR
Trigger: TCTGTCTACTGCCGATGCCAAGAAGGACCCCAGCTG...GGTGACAGAGATGATGGATGAGCAGCTGGATTTTCGTGATGAAGGACGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS TCA 90 bp TCATTAGTACAACACTCTTGCAGAAGGCCCTGTCCCCAGAGCCCTTaGTCTTCCCTGAGCCCAATCCCCAAAGTAGCAGTCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: SLVQHSCRRPCPQSP*SSLSPIPKVAVSSE
Trigger: CTCTGAAGAGACTGCTACTTTGGGGATTGGGCTCAGGGAAGATCAAGGGCTCTGGGGACAGGGCCTTCTGCAAGAGTGTTGTACTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS GCA 90 bp TGTCTCCCTGGAGGGAGCACCCAGTTTGAAAACCGACGAGCTGGGTaGTTCCTCGAACCCTTTGTGATCAGAACACTCATTTTGTGCACT +
Preference number: 5 (lower is better)
Translates to: CLPGGSTQFENRRAG*FLEPFVIRTLILCT
Trigger: AGTGCACAAAATGAGTGTTCTGATCACAAAGGGTTCGAGGAAGCACCCAGCTCGTCGGTTTTCAAACTGGGTGCTCCCTCCAGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS-3UTR CAA 90 bp TATGGCCTTGCCGGCCCGCTGCTGCTTCCGTCCTTCATCACGAAAATCCAGCTGCGGTGCTTGAACTTGTaGGAATTCTTATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: YGLAGPLLLPSFITKIQLRCLNL*EFLFSF
Trigger: GAAGGAGAATAAGAATTCCAACAAGTTCAAGCACCG...CAGCTGGATTTTCGTGATGAAGGACGGAAGCAGCAGCGGGCCGGCAAGGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp CACAGGCTCTCTGTTTGCTTTGTTGATTGTAGGGAGTCCACCCTCGTGACCTGTCAGGTCAGGAACTTGTaGCAAGCAATGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: HRLSVCFVDCRESTLVTCQVRNL*QAMSRR
Trigger: CCTCCTGGACATTGCTTGCAACAAGTTCCTGACCTG...ACAGGTCACGAGGGTGGACTCCCTACAATCAACAAAGCAAACAGAGAGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAAGGCCATGGTGGTTTATaGATGCACGTCGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQGHGGL*MHVAST
Trigger: TGTGCTTGCGACGTGCATCAATAAACCACCATGGCC...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp GTCCACCCTCGTGACCTGTGTGACAGTAGGAATGAGGCAAAAACACAAGGAGGCTCCCGGTGCTTGAACTaGTTGGAATTCTTATTCTCC +
Preference number: 5 (lower is better)
Translates to: VHPRDLCDSRNEAKTQGGSRCLN*LEFLFS
Trigger: GGAGAATAAGAATTCCAACAAGTTCAAGCACCGGGA...GCCTCCTTGTGTTTTTGCCTCATTCCTACTGTCACACAGGTCACGAGGGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS-3UTR CAA 90 bp TGGGCAGGTCTTTGGGAGATAGAGACCTGGACGAGGCAAAGAACAGTAGGACAAGGCTCTCTGTTTGCTTaGTTGATTGTAGGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: WAGLWEIETWTRQRTVGQGSLFA*LIVGSP
Trigger: TGGACTCCCTACAATCAACAAAGCAAACAGAGAGCC...TTGTCCTACTGTTCTTTGCCTCGTCCAGGTCTCTATCTCCCAAAGACCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 72 bp GACAGCAGCCGGACGCCTGGGTCACGGGCAGTGGCGTaGGCTTGCTCCTCTCCCGGCTGCCAAGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: DSSRTPGSRAVA*ACSSPGCQGGC
Trigger: GCAGCCTCCTTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS CCA 72 bp GATGAGCTCCCCGGCAGGGGACAGCAGCCGGACGCCTaGGTCACGGGCAGTGGCGTGCGCTTGCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: DELPGRGQQPDA*VTGSGVRLLLS
Trigger: GGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTGTCCCCTGCCGGGGAGCTCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS CCA 72 bp GGCGGTCGCGGCAGAAGCGGTCCCCCAGGGAGCCTTTaGGCGCCAGCACCAGGATGGCGTAGTGGTAGGCCG +
Preference number: 6 (lower is better)
Translates to: GGRGRSGPPGSL*APAPGWRSGRP
Trigger: CGGCCTACCACTACGCCATCCTGGTGCTGGCGCCCAAAGGCTCCCTGGGGGACCGCTTCTGCCGCGACCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CAA 90 bp AGGGGACAGCAGCCGGACGCCTGGGTCACGGGCAGTGGCGTGCGCTaGCTCCTCTCCCGGCTGCCAAGGAGGCTGCTTCCATGCCCCGCA +
Preference number: 6 (lower is better)
Translates to: RGQQPDAWVTGSGVR*LLSRLPRRLLPCPA
Trigger: TGCGGGGCATGGAAGCAGCCTCCTTGGCAGCCGGGAGAGGAGCAAGCGCACGCCACTGCCCGTGACCCAGGCGTCCGGCTGCTGTCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321613.7
ENST00000454243.7
CDS GCA 72 bp GAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTaGCTTGGCCACGAGCTTGGTGGGGACGTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: EPVASHRHGQRH*LGHELGGDVPV
Trigger: CACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
CDS GCA 72 bp GAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTaGCTTGGCCACGAGCTTGGTGGGGACGTCCCACGG +
Preference number: 6 (lower is better)
Translates to: EPVASHRHGQRH*LGHELGGDVPR
Trigger: CCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS CCA 72 bp GCCCGGCGGGTCCAGCCGGGAGCCCGCGCCCATACCTaGCATGCTGGAAGTACTCCTTGTGATGGTTGCGGT +
Preference number: 6 (lower is better)
Translates to: ARRVQPGARAHT*HAGSTPCDGCG
Trigger: ACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGTATGGGCGCGGGCTCCCGGCTGGACCCGCCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS CCA 72 bp AGTGGCCTCTCACCGTCATGGGCAGCGGCACTGCCTTaGCCACGAGCTTGGTGGGGACGTCCCACGGAGGAC +
Preference number: 6 (lower is better)
Translates to: SGLSPSWAAALP*PRAWWGRPTED
Trigger: GTCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS CAA 72 bp CAGTGGCCTCTCACCGTCATGGGCAGCGGCACTGCCTaGGCCACGAGCTTGGTGGGGACGTCCCGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: QWPLTVMGSGTA*ATSLVGTSRCL
Trigger: CAAGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
CDS CAA 72 bp CAGTGGCCTCTCACCGTCATGGGCAGCGGCACTGCCTaGGCCACGAGCTTGGTGGGGACGTCCCACGGAGGA +
Preference number: 6 (lower is better)
Translates to: QWPLTVMGSGTA*ATSLVGTSHGG
Trigger: TCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS CAA 90 bp CTCAGGAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTGCCTaGGCCACGAGCTTGGTGGGGACGTCCCACGGAGGACTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LRNQWPLTVMGSGTA*ATSLVGTSHGGLSP
Trigger: GGGAGAGAGTCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS GCA 72 bp GCCGGACACCAGGTACTCCCCATCGCTCTGCTTCACTaGCGTCTGCACGGCCACACTGTACTCCGTGCGGGG +
Preference number: 6 (lower is better)
Translates to: AGHQVLPIALLH*RLHGHTVLRAG
Trigger: CCCCGCACGGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTACCTGGTGTCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS CCA 72 bp GTGCCAGGGCCCTCGGATTCAGGCCTCTCTCCTCACTaGGGTCAGCAAGCGTTGCCGCGGTACATGGCTGGC +
Preference number: 6 (lower is better)
Translates to: VPGPSDSGLSPH*GQQALPRYMAG
Trigger: GCCAGCCATGTACCGCGGCAACGCTTGCTGACCCCAGTGAGGAGAGAGGCCTGAATCCGAGGGCCCTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS CCA 72 bp CCGTCATGGGCAGCGGCACTGCCTTGGCCACGAGCTTaGTGGGGACGTCCCACGGAGGACTCTCTCCCATTC +
Preference number: 6 (lower is better)
Translates to: PSWAAALPWPRA*WGRPTEDSLPF
Trigger: GAATGGGAGAGAGTCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS CAA 72 bp TGGGGCGTGGACAGCAGCTCCATGCTCCCGTCAGGGTaGTCTCCTGTGGGGACTGCTGTGGAGCGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: WGVDSSSMLPSG*SPVGTAVERRC
Trigger: GCACCTCCGCTCCACAGCAGTCCCCACAGGAGACAACCCTGACGGGAGCATGGAGCTGCTGTCCACGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS CAA 72 bp ACCGTCATGGGCAGCGGCACTGCCTTGGCCACGAGCTaGGTGGGGACGTCCCACGGAGGACTCTCTCCCATT +
Preference number: 6 (lower is better)
Translates to: TVMGSGTALATS*VGTSHGGLSPI
Trigger: AATGGGAGAGAGTCCTCCGTGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523252.1
CDS GCA 72 bp GCGTTGCCGCGGTACATGGCTGGCTCCACTGGGCTCTaGAGAGGAAAAGCTCGCAGGGAGGACAGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: ALPRYMAGSTGL*RGKARREDRER
Trigger: TCTCTCCCTGTCCTCCCTGCGAGCTTTTCCTCTGCAGAGCCCAGTGGAGCCAGCCATGTACCGCGGCAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321613.7
CDS GCA 72 bp TCGCTCCAGCCGGACACCAGGTACTCCCCATCGCTCTaGTTCACTGCCGTCTGCACGGCCACACTGTACTCC +
Preference number: 6 (lower is better)
Translates to: SLQPDTRYSPSL*FTAVCTATLYS
Trigger: GGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGCAGAGCGATGGGGAGTACCTGGTGTCCGGCTGGAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
ENST00000523252.1
CDS GCA 72 bp CCCCGTGGAGCATACCGCTGGTGGGGGAGCCGTGGCTaGCACTGTTGTCCTTCAGGTAAGGCTGCAGCATGT +
Preference number: 6 (lower is better)
Translates to: PRGAYRWWGSRG*HCCPSGKAAAC
Trigger: ACATGCTGCAGCCTTACCTGAAGGACAACAGTGGCAGCCACGGCTCCCCCACCAGCGGTATGCTCCACGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CCA 72 bp GTAGAGGTTGGTGCTGGGATTGAAGAGGCGCTGAGCTaGGATCTGGAAGCGCCAGCGGCCGTAGGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: VEVGAGIEEALS*DLEAPAAVGGV
Trigger: GACTCCCCCTACGGCCGCTGGCGCTTCCAGATCCCAGCTCAGCGCCTCTTCAATCCCAGCACCAACCTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CAA 90 bp CTCAGGAACCAGTGGCCTCTCACCGTCATGGGCAGCGGCACTGCCTaGGCCACGAGCTTGGTGGGGACGTCCCGGTGCTTGAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: LRNQWPLTVMGSGTA*ATSLVGTSRCLNLL
Trigger: CAACAAGTTCAAGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGTGAGAGGCCACTGGTTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
CDS CCA 72 bp GGTCCCCCAGGGAGCCTTTGGGCGCCAGCACCAGGATaGCGTAGTGGTAGGCCGTGTACATGCAGTAGAAGT +
Preference number: 6 (lower is better)
Translates to: GPPGSLWAPAPG*RSGRPCTCSRS
Trigger: ACTTCTACTGCATGTACACGGCCTACCACTACGCCATCCTGGTGCTGGCGCCCAAAGGCTCCCTGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CAA 72 bp ACCGTCATGGGCAGCGGCACTGCCTTGGCCACGAGCTaGGTGGGGACGTCCCGGTGCTTGAACTTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: TVMGSGTALATS*VGTSRCLNLLE
Trigger: TTCCAACAAGTTCAAGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATGACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
ENST00000522869.5
CDS CAA 72 bp ACCAGCTCCCCATCCTCCACGCTGCAGGTCAGGAACTaGTTGCAAGCAATGTCCAGGAGGGGCAGGCGGTCG +
Preference number: 6 (lower is better)
Translates to: TSSPSSTLQVRN*LQAMSRRGRRS
Trigger: CGACCGCCTGCCCCTCCTGGACATTGCTTGCAACAAGTTCCTGACCTGCAGCGTGGAGGATGGGGAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CAA 90 bp TCCTCCATGGCCCAGGAGATGCGGAAGGAGTCGCAGGTGATGTTGTaGATCTCAATGCTGTGGGGCGTGGACAGCAGCTCCATGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SSMAQEMRKESQVML*ISMLWGVDSSSMLP
Trigger: CGGGAGCATGGAGCTGCTGTCCACGCCCCACAGCATTGAGATCAACAACATCACCTGCGACTCCTTCCGCATCTCCTGGGCCATGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
CDS TCA 72 bp GGGACTGAGGAGGAGGGAAAGGGTCAGTACATCCCTTaGCCCCGGCGAGCTTTCTGGAATGTCCTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: GTEEEGKGQYIP*PRRAFWNVLLP
Trigger: TGGGAGGAGGACATTCCAGAAAGCTCGCCGGGGTCAAGGGATGTACTGACCCTTTCCCTCCTCCTCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518274.1
CDS GCA 72 bp GTTGCGGTAGAAGACGGAGAAGCGGAGCATGCGGCCTaGGATCTGCTCAGCTTTCTCCTGAAGCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VAVEDGEAEHAA*DLLSFLLKLSQ
Trigger: CTGGCTCAGCTTCAGGAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000522869.5
ENST00000523252.1
CDS GCA 72 bp GGGTCCTGGCATGCTGGAAGTACTCCTTGTGATGGTTaGGGTAGAAGACGGAGAAGCGGAGCATGCGGCCTG +
Preference number: 6 (lower is better)
Translates to: GSWHAGSTPCDG*GRRRRSGACGL
Trigger: CAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000523252.1
CDS CCA 72 bp ACAGCAGCTCCATGCTCCCGTCAGGGTTGTCTCCTGTaGGGACTGAGGAGGAGGGAAAGGGTCAGTACATCC +
Preference number: 6 (lower is better)
Translates to: TAAPCSRQGCLL*GLRRRERVSTS
Trigger: GGATGTACTGACCCTTTCCCTCCTCCTCAGTCCCCACAGGAGACAACCCTGACGGGAGCATGGAGCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518274.1
CDS CAA 72 bp GCCCAGGAGATGCGGAAGGAGTCGCAGGTGATGTTGTaGATCTCAATGCTGTGGGGCGTGGACAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AQEMRKESQVML*ISMLWGVDSSS
Trigger: GGAGCTGCTGTCCACGCCCCACAGCATTGAGATCAACAACATCACCTGCGACTCCTTCCGCATCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
CDS CAA 90 bp CTGTCCTCCATGGCCCAGGAGATGCGGAAGGAGTCGCAGGTGATGTaGTTGATCTCAATGCTGTGGGGCGTGGACAGCAGCTCCATGCTC +
Preference number: 6 (lower is better)
Translates to: LSSMAQEMRKESQVM*LISMLWGVDSSSML
Trigger: GAGCATGGAGCTGCTGTCCACGCCCCACAGCATTGAGATCAACAACATCACCTGCGACTCCTTCCGCATCTCCTGGGCCATGGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
CDS CAA 72 bp ATGGCCCAGGAGATGCGGAAGGAGTCGCAGGTGATGTaGTTGATCTCAATGCTGTGGGGCGTGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: MAQEMRKESQVM*LISMLWGVDSS
Trigger: GCTGCTGTCCACGCCCCACAGCATTGAGATCAACAACATCACCTGCGACTCCTTCCGCATCTCCTGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000518274.1
CDS GCA 72 bp TGTGATGGTTGCGGTAGAAGACGGAGAAGCGGAGCATaGGGCCTGCGATCTGCTCAGCTTTCTCCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: CDGCGRRRRSGA*GLRSAQLSPEA
Trigger: AGCTTCAGGAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321613.7
ENST00000454243.7
ENST00000522869.5
ENST00000523252.1
CDS GCA 72 bp CATACCTGGCATGCTGGAAGTACTCCTTGTGATGGTTaGGGTAGAAGACGGAGAAGCGGAGCATGCGGCCTG +
Preference number: 6 (lower is better)
Translates to: HTWHAGSTPCDG*GRRRRSGACGL
Trigger: CAGGCCGCATGCTCCGCTTCTCCGTCTTCTACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS CAA 90 bp AGCAAACCCAGACCTCATTCTCCCAGGCTCATTAGTACAACACTCTaGCAGAAGGCCCTGTCCCCAGAGCCCTTGATCTTCCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SKPRPHSPRLISTTL*QKALSPEPLIFPEP
Trigger: GGGCTCAGGGAAGATCAAGGGCTCTGGGGACAGGGCCTTCTGCAAGAGTGTTGTACTAATGAGCCTGGGAGAATGAGGTCTGGGTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS TCA 72 bp ATCCCCAAAGTAGCAGTCTCTTCAGAGCCAGCCTGGTaGCGTCAGGACATGTCAACCCTAGAGGAGGGACTG +
Preference number: 6 (lower is better)
Translates to: IPKVAVSSEPAW*RQDMSTLEEGL
Trigger: CAGTCCCTCCTCTAGGGTTGACATGTCCTGACGTCACCAGGCTGGCTCTGAAGAGACTGCTACTTTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS TCA 72 bp TTCACTGACATGTCTCCCTGGAGGGAGCACCCAGTTTaGAAACCGACGAGCTGGGTGCTTCCTCGAACCCTT +
Preference number: 6 (lower is better)
Translates to: FTDMSPWREHPV*KPTSWVLPRTL
Trigger: AAGGGTTCGAGGAAGCACCCAGCTCGTCGGTTTTCAAACTGGGTGCTCCCTCCAGGGAGACATGTCAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS CAA 72 bp ACAACACTCTTGCAGAAGGCCCTGTCCCCAGAGCCCTaGATCTTCCCTGAGCCCAATCCCCAAAGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: TTLLQKALSPEP*IFPEPNPQSSS
Trigger: ACTGCTACTTTGGGGATTGGGCTCAGGGAAGATCAAGGGCTCTGGGGACAGGGCCTTCTGCAAGAGTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS GCA 72 bp GGAGGGAGCACCCAGTTTGAAAACCGACGAGCTGGGTaGTTCCTCGAACCCTTTGTGATCAGAACACTCATT +
Preference number: 6 (lower is better)
Translates to: GGSTQFENRRAG*FLEPFVIRTLI
Trigger: AATGAGTGTTCTGATCACAAAGGGTTCGAGGAAGCACCCAGCTCGTCGGTTTTCAAACTGGGTGCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522869.5
CDS CAA 90 bp CTCATTAGTACAACACTCTTGCAGAAGGCCCTGTCCCCAGAGCCCTaGATCTTCCCTGAGCCCAATCCCCAAAGTAGCAGTCTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: LISTTLLQKALSPEP*IFPEPNPQSSSLFR
Trigger: TCTGAAGAGACTGCTACTTTGGGGATTGGGCTCAGGGAAGATCAAGGGCTCTGGGGACAGGGCCTTCTGCAAGAGTGTTGTACTAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522869.5