RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHTF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000116793

Ensembl transcript IDs: ENST00000357783.6, ENST00000369598.5, ENST00000369600.5, ENST00000369604.6, ENST00000393357.6, ENST00000412670.1, ENST00000446739.1, ENST00000472612.5, ENST00000474926.5, ENST00000481652.1, ENST00000493212.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGTTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: HSFALAELRAPVHVNKQVLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR TCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGATTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR TCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCTTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: VHVNKQVGISLVSAVITFLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 2 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHRWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACGCATGCACACCCAGTTaGAAAAGGACTTGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHACTPS*KRTCSS
Trigger: GGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGC...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 2 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLRWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACATTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR GCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAAAGTTGGAAAAGGACTTaGTCCTCCGGAAACACCATT +
Preference number: 2 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKSWKRT*SSGNTI
Trigger: AATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACT...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR GCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTACAGGTTTTTAGCATaGACACCCAGTTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSYRFLA*TPSWKR
Trigger: CCTTTTCCAACTGGGTGTGCATGCTAAAAACCTGTA...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR GCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACTACAGGTTTTTAGCATaGACACCCAGTTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHYRFLA*TPSWKR
Trigger: CCTTTTCCAACTGGGTGTGCATGCTAAAAACCTGTA...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 2 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVRWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR TCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGCAGTCTTTAGTCAGCTaGCTATTCATGTTGTTTGAA +
Preference number: 2 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVQSLVS*LFMLFE
Trigger: TTCAAACAACATGAATAGTCAGCTGACTAAAGACTG...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR GCA 72 bp AGGTTTTTAGCATGCACACCCAGTTGGAAAAGGACTTaGTCCTCCGGAAACACCATTCATTCGCTTTGGCAG +
Preference number: 3 (lower is better)
Translates to: RFLACTPSWKRT*SSGNTIHSLWQ
Trigger: CTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAAAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTCACCATTCATTCGCTTaGGCAGAGCTGAGAGCACCT +
Preference number: 3 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLHHSFA*AELRAP
Trigger: AGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTG...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CAA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCATGCACACCCAGTaGGAAAAGGACTTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHSMHTQ*EKDLLL
Trigger: GAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCT...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CAA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACACACCATTCATTCGCTTaGGCAGAGCTGAGAGCACCT +
Preference number: 3 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTHHSFA*AELRAP
Trigger: AGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTG...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CAA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTAGCATGCACACCCAGTaGGAAAAGGACTTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSSMHTQ*EKDLLL
Trigger: GAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCT...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CAA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTACAGTTGGAAAAGGACTaGCTCCTCCGGAAACACCAT +
Preference number: 3 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLQLEKD*LLRKHH
Trigger: ATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTG...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR-3UTR CAA 90 bp AGGAACCACAACTCAGATGATCTATATGGAAACAATGCTTCCATGGCTTCCACAGAATTACATGGCATATaGTATGCATGCATCGTTTGC +
Preference number: 3 (lower is better)
Translates to: RNHNSDDLYGNNASMASTELHGI*YACIVC
Trigger: GCAAACGATGCATGCATACAATATGCCATGTAATTC...TGTGGAAGCCATGGAAGCATTGTTTCCATATAGATCATCTGAGTTGTGGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369604.6
3UTR CCA 72 bp ACAACTCAGATGATCTATATGGAAACAATGCTTCCATaGCTTCCACATAGAACGTGGAAACCATGTTGTATG +
Preference number: 3 (lower is better)
Translates to: TTQMIYMETMLP*LPHRTWKPCCM
Trigger: CATACAACATGGTTTCCACGTTCTATGTGGAAGCCATGGAAGCATTGTTTCCATATAGATCATCTGAGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369604.6
3UTR GCA 72 bp GACCTGAAAATGTACGGAGGGTTTAATACATTAAGTTaGACAACTGATAAACTATCAATGATGCTTGTGATA +
Preference number: 3 (lower is better)
Translates to: DLKMYGGFNTLS*TTDKLSMMLVI
Trigger: TATCACAAGCATCATTGATAGTTTATCAGTTGTGCAACTTAATGTATTAAACCCTCCGTACATTTTCAGGTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR TCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGGGCCGCCCAGCGCCCTaGGGGCGGCAAATCGATCGC +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVGRPAP*GRQIDR
Trigger: GCGATCGATTTGCCGCCCTCAGGGCGCTGGGCGGCC...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR GCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTTTCACTAGTGCCCGTTaGCCCGCGGGCCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCFTSAR*PAGRRP
Trigger: CGGGCGCCGGCCCGCGGGGCAACGGGCACTAGTGAA...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR TCA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATGGCCGCCCAGCGCCCTaGGGGCGGCAAATCGATCGC +
Preference number: 4 (lower is better)
Translates to: VNKQVGISLVSAVITFLDGRPAP*GRQIDR
Trigger: GCGATCGATTTGCCGCCCTCAGGGCGCTGGGCGGCC...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR GCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACGACCTCCGTCCTCAGTaGCCGGGGTCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHDLRPQ*PGSHRE
Trigger: CTCACGGTGGGACCCCGGGCACTGAGGACGGAGGTC...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATGACCTCCGTCCTCAGTaGCCGGGGTCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: VNKQVGISLVSAVITFLDDLRPQ*PGSHRE
Trigger: CTCACGGTGGGACCCCGGGCACTGAGGACGGAGGTC...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTCCCGATCTAGAGCCCTaGCTGAAGGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCPDLEP*LKAADS
Trigger: TGAATCAGCAGCCTTCAGCCAGGGCTCTAGATCGGG...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGCTCTTCTTGACATGTTaGGGCTTCGAGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LRKHHSFALAELRAPVHVLFLTC*GFESHH
Trigger: GTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAG...CACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATGTCACTGGTGACAGATaGCCGGCACTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHVTGDR*PALWAM
Trigger: CATGGCCCAGAGTGCCGGTCATCTGTCACCAGTGAC...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCCGTTTGGTCCCTGAGTaGAGGGTATTCACATGGGCC +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRRLVPE*RVFTWA
Trigger: GGCCCATGTGAATACCCTTCACTCAGGGACCAAACG...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTACAACCACATCAACTaGACGCTGTGGCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRYNHIN*TLWPPS
Trigger: AGACGGGGGCCACAGCGTTCAGTTGATGTGGTTGTA...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGAGCACCTGTGCATGTaGACAAGCAGGTGGGTATCT +
Preference number: 4 (lower is better)
Translates to: LLRKHHSFALAELRAPVHEHLCM*TSRWVS
Trigger: AGATACCCACCTGCTTGTTCACATGCACAGGTGCTC...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACGGGCGAGCGTGTTCGTaGGTGCGGGGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHGRACS*VRGRGR
Trigger: CCTGCCCCTCCCCCGCACCCACGAACACGCTCGCCC...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR TCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGGTGAGTCCAGCTGCTaGAGGTTACTCTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGGESSC*RLLSQF
Trigger: AAACTGGGAGAGTAACCTTCAGCAGCTGGACTCACC...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGACAACCATTGTCACTTaGGGCCCCTTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVTTIVT*GPFHTP
Trigger: AGGAGTGTGGAAGGGGCCTCAAGTGACAATGGTTGT...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGCTCTTCTTGACATGTTaGGGCTTCGAGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVLFLTC*GFESHH
Trigger: GTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAG...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCACGTTTGGTCCCTGAGTaGAGGGTATTCACATGGGCC +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQARLVPE*RVFTWA
Trigger: GGCCCATGTGAATACCCTTCACTCAGGGACCAAACG...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCATACAACCACATCAACTaGACGCTGTGGCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQAYNHIN*TLWPPS
Trigger: AGACGGGGGCCACAGCGTTCAGTTGATGTGGTTGTA...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACGCGGCGCTCGTCTTCTaGGGGCCGCGCCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHAALVF*GPRRDA
Trigger: TGCATCCCGGCGCGGCCCGCAGAAGACGAGCGCCGC...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR GCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGCCGAGTCATGGCGGGTaGTTTCTGAGTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVPSHGG*FLSLFL
Trigger: CAAGAAGAGACTCAGAAAGCACCCGCCATGACTCGG...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACATTCACTAGTGCCCGTTaGCCCGCGGGCCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTFTSAR*PAGRRP
Trigger: CGGGCGCCGGCCCGCGGGGCAACGGGCACTAGTGAA...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGACCCGATCTAGAGCCCTaGCTGAAGGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRPDLEP*LKAADS
Trigger: TGAATCAGCAGCCTTCAGCCAGGGCTCTAGATCGGG...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTCAGTCTCCGAGTCATaGCGGGTGCTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRSVSES*RVLSES
Trigger: AGACTCAGAAAGCACCCGCCATGACTCGGAGACTGA...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGCTTTGGGGTCACGTTTaGTCCCTGAGTGAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: LRKHHSFALAELRAPVHVLWGHV*SLSEGY
Trigger: ATACCCTTCACTCAGGGACCAAACGTGACCCCAAAG...CACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCTTTGGGGTCACGTTTaGTCCCTGAGTGAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVLWGHV*SLSEGY
Trigger: ATACCCTTCACTCAGGGACCAAACGTGACCCCAAAG...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGCATGCACACCCAGTTaGAAAAGGACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGACTPS*KRTCSS
Trigger: GGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGC...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGACCATCTTCTTCACTTaGCAGGTCATCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVTIFFT*QVIRHP
Trigger: GGGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGT...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACACAACCATTGTCACTTaGGGCCCCTTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHTTIVT*GPFHTP
Trigger: AGGAGTGTGGAAGGGGCCTCAAGTGACAATGGTTGT...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACCTCTTCTTGACATGTTaGGGCTTCGAGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHLFLTC*GFESHH
Trigger: GTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAG...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATCGTTTGGTCCCTGAGTaGAGGGTATTCACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHRLVPE*RVFTWA
Trigger: GGCCCATGTGAATACCCTTCACTCAGGGACCAAACG...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGAGCACCTGTGCATGTaGACAAGCAGGTGGGTATCT +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQAEHLCM*TSRWVS
Trigger: AGATACCCACCTGCTTGTTCACATGCACAGGTGCTC...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACCCGAGTCATGGCGGGTaGTTTCTGAGTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHPSHGG*FLSLFL
Trigger: CAAGAAGAGACTCAGAAAGCACCCGCCATGACTCGG...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTTTCACTAGTGCCCGTTaGCCCGCGGGCCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTFTSAR*PAGRRP
Trigger: CGGGCGCCGGCCCGCGGGGCAACGGGCACTAGTGAA...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGGAGAGGCCGTTACCATaGAGACCGCGGAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQERPLP*RPRRPP
Trigger: GGGCGGCCTCCGCGGTCTCCATGGTAACGGCCTCTC...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCCCGATCTAGAGCCCTaGCTGAAGGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: VHVNKQVGISLVSAVITFPDLEP*LKAADS
Trigger: TGAATCAGCAGCCTTCAGCCAGGGCTCTAGATCGGG...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACGCATGCACACCCAGTTaGAAAAGGACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHACTPS*KRTCSS
Trigger: GGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGC...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAACCATCTTCTTCACTTaGCAGGTCATCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQATIFFT*QVIRHP
Trigger: GGGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGT...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATACAACCATTGTCACTTaGGGCCCCTTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHTTIVT*GPFHTP
Trigger: AGGAGTGTGGAAGGGGCCTCAAGTGACAATGGTTGT...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATTTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LLRKHHSFALAELRAPVHLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCGGCTTTGTGCCCAGCTaGAAAAGACAGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VHVNKQVGISLVSAVITFGFVPS*KRQVQR
Trigger: CCTTTGCACCTGTCTTTTCCAGCTGGGCACAAAGCC...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAAGAGAGGCCGTTACCATaGAGACCGCGGAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKERPLP*RPRRPP
Trigger: GGGCGGCCTCCGCGGTCTCCATGGTAACGGCCTCTC...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp CTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGG +
Preference number: 4 (lower is better)
Translates to: LRKHHSFALAELRAPVHVEMDFS*SRLFSR
Trigger: CCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTC...CACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGG +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCEMDFS*SRLFSR
Trigger: CCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTC...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCGCATGCACACCCAGTTaGAAAAGGACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VHVNKQVGISLVSAVITFACTPS*KRTCSS
Trigger: GGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGC...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGGTGGTTTTCTTTACCTaGGAGTTTAGGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVVVFFT*EFRCLE
Trigger: TTCAAGGCACCTAAACTCTCAGGTAAAGAAAACCAC...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGAATCCCGCACAATATaGCACCACCTTGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQAESRTI*HHLVVV
Trigger: AACCACTACAAGGTGGTGTCATATTGTGCGGGATTC...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGTATCATCTGTGTCCGTaGTTCACCATCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVYHLCP*FTIFFT
Trigger: AGTGAAGAAGATGGTGAAGCACGGACACAGATGATA...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCACCCCTCCCAGATTATTaGACTAACTCGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQAPLPDY*TNSIRG
Trigger: TCCTCTGATCGAGTTAGTGCAATAATCTGGGAGGGG...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAAGGTGTAACAGGTGGTaGCCCACAAAAGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRRCNRW*PTKESQ
Trigger: TTGACTCTCTTTTGTGGGGCACCACCTGTTACACCT...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTAGTTGGAAAAGGACTTaGTCCTCCGGAAACACCATT +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGSWKRT*SSGNTI
Trigger: AATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACT...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGGGCATCTATCATAGTTaGCCAAAAGACTATGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVGIYHS*PKDYVQ
Trigger: CTGGACATAGTCTTTTGGGCAACTATGATAGATGCC...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGGAGAGGCCGTTACCATaGAGACCGCGGAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVERPLP*RPRRPP
Trigger: GGGCGGCCTCCGCGGTCTCCATGGTAACGGCCTCTC...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGAAGTCTGGCTTTATGTaGCCCATCTTTTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVKSGFM*PIFFGL
Trigger: CAAACCGAAAAAGATGGGCCACATAAAGCCAGACTT...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTAACGTCAATCAAGTCTaGCTTTATGTGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCNVNQV*LYVAHL
Trigger: AAGATGGGCCACATAAAGCCAGACTTGATTGACGTT...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATAGGATGGACACAACTTaGGTCATTGTCAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLRKHHSFALAELRAPVHRMDTT*VIVSFS
Trigger: ACTGAAACTGACAATGACCCAAGTTGTGTCCATCCT...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGCCACATTCTAATCTCTaGTCGACATTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRKHHSFALAELRAPVHVPHSNL*STLSPL
Trigger: AAGAGGAGACAATGTCGACCAGAGATTAGAATGTGG...CACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGG +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGEMDFS*SRLFSR
Trigger: CCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTC...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGTGCTGTATTTCTTATTaGTTTCAGACCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVCCISY*FQTPVR
Trigger: CCTCACTGGGGTCTGAAACCAATAAGAAATACAGCA...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
3UTR CAA 72 bp CAGGTTTTTAGCATGCACACCCAGTTGGAAAAGGACTaGCTCCTCCGGAAACACCATTCATTCGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QVFSMHTQLEKD*LLRKHHSFALA
Trigger: TGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAAAAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATGAATCCCGCACAATATaGCACCACCTTGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHESRTI*HHLVVV
Trigger: AACCACTACAAGGTGGTGTCATATTGTGCGGGATTC...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGATTCAGCCAGACTATCTaGATCCCGCACAATATGACA +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRFSQTI*IPHNMT
Trigger: TGTCATATTGTGCGGGATTCAGATAGTCTGGCTGAA...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATGTCACGTTTGGTCCCTaGGTGAAGGGTATTCACATG +
Preference number: 4 (lower is better)
Translates to: VNKQVGISLVSAVITFLDVTFGP*VKGIHM
Trigger: CATGTGAATACCCTTCACTCAGGGACCAAACGTGAC...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATCAGCAAAAGGCTTTGTaGCCAGCTGGAAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: VNKQVGISLVSAVITFLDQQKAL*PAGKDR
Trigger: CCTGTCTTTTCCAGCTGGGCACAAAGCCTTTTGCTG...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369600.5
ENST00000369604.6
CDS-3UTR GCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTATCATCTGTGTCCGTaGTTCACCATCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRYHLCP*FTIFFT
Trigger: AGTGAAGAAGATGGTGAAGCACGGACACAGATGATA...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTCCCCTCCCAGATTATTaGACTAACTCGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPPLPDY*TNSIRG
Trigger: TCCTCTGATCGAGTTAGTGCAATAATCTGGGAGGGG...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCAGGTGTAACAGGTGGTaGCCCACAAAAGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VHVNKQVGISLVSAVITFRCNRW*PTKESQ
Trigger: TTGACTCTCTTTTGTGGGGCACCACCTGTTACACCT...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACAGTTGGAAAAGGACTTaGTCCTCCGGAAACACCATT +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHSWKRT*SSGNTI
Trigger: AATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACT...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTTACAGGTTTTTAGCATaGACACCCAGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGYRFLA*TPSWKR
Trigger: CCTTTTCCAACTGGGTGTGCATGCTAAAAACCTGTA...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTACAGGTTTTTAGCATaGACACCCAGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRYRFLA*TPSWKR
Trigger: CCTTTTCCAACTGGGTGTGCATGCTAAAAACCTGTA...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCGGCATCTATCATAGTTaGCCAAAAGACTATGTCCAG +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRGIYHS*PKDYVQ
Trigger: CTGGACATAGTCTTTTGGGCAACTATGATAGATGCC...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGGGCATCTATCATAGTTaGCCAAAAGACTATGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVGIYHS*PKDYVQ
Trigger: CTGGACATAGTCTTTTGGGCAACTATGATAGATGCC...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGAACGTCAATCAAGTCTaGCTTTATGTGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVNVNQV*LYVAHL
Trigger: AAGATGGGCCACATAAAGCCAGACTTGATTGACGTT...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATCTCTTAATGATAGGATaGACACAACTTGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: LLRKHHSFALAELRAPVHLLMIG*TQLGSL
Trigger: CAATGACCCAAGTTGTGTCCATCCTATCATTAAGAG...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCATCTCCTCAGCTGAAATaGACTTTAGTTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQASPQLK*TLVGQG
Trigger: GCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGA...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATTCTCCAGCCAGAGAATaGGATTTCACTAGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: VNKQVGISLVSAVITFLDSPARE*DFTSAR
Trigger: ACGGGCACTAGTGAAATCCCATTCTCTGGCTGGAGA...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTTGCTGTATTTCTTATTaGTTTCAGACCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGCCISY*FQTPVR
Trigger: CCTCACTGGGGTCTGAAACCAATAAGAAATACAGCA...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATTCCATAGAGTCTAAATaGTGTGTCCAGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLRKHHSFALAELRAPVHSIESK*CVQLFQ
Trigger: TTGAAAGAGCTGGACACACCATTTAGACTCTATGGA...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTTCCATAGAGTCTAAATaGTGTGTCCAGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCSIESK*CVQLFQ
Trigger: TTGAAAGAGCTGGACACACCATTTAGACTCTATGGA...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHRWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQARWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGAAACAATGCTTCCATaGCTTCCACATAGAACGTGG +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRETMLP*LPHRTW
Trigger: CCACGTTCTATGTGGAAGCCATGGAAGCATTGTTTC...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR TCA 90 bp CTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGTTCAAACCCTTAATCTaGGTCTGTTCGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: LRKHHSFALAELRAPVHVFKPLI*VCSIDF
Trigger: AAAGTCAATCGAACAGACTCAGATTAAGGGTTTGAA...CACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCCAAATGTTGACCCTCTaGTTAAGTCAACGTCAATCA +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRQMLTL*LSQRQS
Trigger: TGATTGACGTTGACTTAATCAGAGGGTCAACATTTG...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGACTTAAAGAGGTAACCTaGATCCACCAATTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRLKEVT*IHQLLN
Trigger: GTTCAGCAATTGGTGGATTCAGGTTACCTCTTTAAG...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGATTTCCATTGTTTCCTaGTGGTCTTGTTATCTGAGT +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVISIVS*WSCYLS
Trigger: ACTCAGATAACAAGACCATCAGGAAACAATGGAAAT...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGTGGTTTTCTTTACCTaGGAGTTTAGGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRVVFFT*EFRCLE
Trigger: TTCAAGGCACCTAAACTCTCAGGTAAAGAAAACCAC...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATGAATCCCGCACAATATaGCACCACCTTGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VNKQVGISLVSAVITFLDESRTI*HHLVVV
Trigger: AACCACTACAAGGTGGTGTCATATTGTGCGGGATTC...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTGTCACTGGTGACAGATaGCCGGCACTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSVTGDR*PALWAM
Trigger: CATGGCCCAGAGTGCCGGTCATCTGTCACCAGTGAC...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAAGTCACTGGTGACAGATaGCCGGCACTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKVTGDR*PALWAM
Trigger: CATGGCCCAGAGTGCCGGTCATCTGTCACCAGTGAC...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAGTCACTGGTGACAGATaGCCGGCACTCTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: YQSFIAHINLKRDQIKRTVTGDR*PALWAM
Trigger: CATGGCCCAGAGTGCCGGTCATCTGTCACCAGTGAC...TGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCCTCACTGTCACTGGTaGCAGATGACCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQPHCHW*QMTGTL
Trigger: CAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCTACAACCACATCAACTaGACGCTGTGGCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSYNHIN*TLWPPS
Trigger: AGACGGGGGCCACAGCGTTCAGTTGATGTGGTTGTA...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCTGTCCTTGGAGAACCTaGGCACAACAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VHVNKQVGISLVSAVITFCPWRT*AQQMKA
Trigger: TGCTTTCATTTGTTGTGCTCAGGTTCTCCAAGGACA...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTATCACTTATAACACCTaGGACAGCAGAAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGITYNT*DSRKDN
Trigger: GTTATCCTTTCTGCTGTCTCAGGTGTTATAAGTGAT...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGGAAACCATGTTGTATaGTGGAAATGGATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRGNHVV*WKWMSR
Trigger: CCTACTCATCCATTTCCATCATACAACATGGTTTCC...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR GCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTATCATCTGTGTCCGTaGTTCACCATCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHYHLCP*FTIFFT
Trigger: AGTGAAGAAGATGGTGAAGCACGGACACAGATGATA...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTACAGGTTTTTAGCATaGACACCCAGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHYRFLA*TPSWKR
Trigger: CCTTTTCCAACTGGGTGTGCATGCTAAAAACCTGTA...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTAAGCAGAGAATGAACTaGAAAATGAGGGGGATTAAA +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCKQRMN*KMRGIK
Trigger: TTTAATCCCCCTCATTTTCCAGTTCATTCTCTGCTT...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGTCTCCAGCCAGAGAATaGGATTTCACTGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVSPARE*DFTENE
Trigger: TTCATTTTCAGTGAAATCCCATTCTCTGGCTGGAGA...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR CCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACAAGTCTGGCTTTATGTaGCCCATCTTTTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHKSGFM*PIFFGL
Trigger: CAAACCGAAAAAGATGGGCCACATAAAGCCAGACTT...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAAGGATGGACACAACTTaGGTCATTGTCAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQARMDTT*VIVSFS
Trigger: ACTGAAACTGACAATGACCCAAGTTGTGTCCATCCT...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTCTCTTAATGATAGGATaGACACAACTTGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGLLMIG*TQLGSL
Trigger: CAATGACCCAAGTTGTGTCCATCCTATCATTAAGAG...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTCTCCTCAGCTGAAATaGACTTTAGTTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPSPQLK*TLVGQG
Trigger: GCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGA...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTAATAGGTGTAACAGGTaGTGCCCCACAAAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPNRCNR*CPTKES
Trigger: ACTCTCTTTTGTGGGGCACCACCTGTTACACCTATT...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTATTTGCTTCATGCTTTaGGCATCTATCATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: PFIRFGRAESTCACEQAGICFML*ASIIVA
Trigger: GGCAACTATGATAGATGCCCAAAGCATGAAGCAAAT...ACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGCTTCCACATAGAACGTaGAAACCATGTTGTATGATG +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVLPHRT*KPCCMM
Trigger: CATCATACAACATGGTTTCCACGTTCTATGTGGAAG...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGTTCAAACCCTTAATCTaGGTCTGTTCGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVFKPLI*VCSIDF
Trigger: AAAGTCAATCGAACAGACTCAGATTAAGGGTTTGAA...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGATTTCCATTGTTTCCTaGTGGTCTTGTTATCTGAGT +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVISIVS*WSCYLS
Trigger: ACTCAGATAACAAGACCATCAGGAAACAATGGAAAT...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACCCTCACTGTCACTGGTaGCAGATGACCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHPHCHW*QMTGTL
Trigger: CAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGG...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACACCTCACTGTCACTGGTaGCAGATGACCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTPHCHW*QMTGTL
Trigger: CAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGG...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAACCTCACTGTCACTGGTaGCAGATGACCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: SILYCPHQLEERPNQENKPHCHW*QMTGTL
Trigger: CAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGG...TTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCCTGAGCACAACAAATaGAAGCAATCGAAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: VHVNKQVGISLVSAVITFPEHNK*KQSKVS
Trigger: TGACACTTTCGATTGCTTTCATTTGTTGTGCTCAGG...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAATCACTTATAACACCTaGGACAGCAGAAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQAITYNT*DSRKDN
Trigger: GTTATCCTTTCTGCTGTCTCAGGTGTTATAAGTGAT...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCGAGCACCTGTGCATGTaGACAAGCAGGTGGGTATCT +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSEHLCM*TSRWVS
Trigger: AGATACCCACCTGCTTGTTCACATGCACAGGTGCTC...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCCAGTCTTTAGTCAGCTaGCTATTCATGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRQSLVS*LFMLFE
Trigger: TTCAAACAACATGAATAGTCAGCTGACTAAAGACTG...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGAGAAAACCTAGAAACTaGAAGTCTCCAGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: HSFALAELRAPVHVNKQVRKPRN*KSPVKF
Trigger: GAACTTTACTGGAGACTTTCAGTTTCTAGGTTTTCT...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR GCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTACAGGTTTTTAGCATaGACACCCAGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHYRFLA*TPSWKR
Trigger: CCTTTTCCAACTGGGTGTGCATGCTAAAAACCTGTA...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCCAATAAAAGATATTTaGTTCATGCTTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LLLRKHHSFALAELRAPVPIKDI*FMLWAS
Trigger: AGATGCCCAAAGCATGAAGCAAATATCTTTTATTGG...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTCCAATAAAAGATATTTaGTTCATGCTTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LAPPETPFIRFGRAESTCPIKDI*FMLWAS
Trigger: AGATGCCCAAAGCATGAAGCAAATATCTTTTATTGG...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGGCATATTGTATGCATaGATCGTTTGCCAACAACTA +
Preference number: 4 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRGILYA*IVCQQL
Trigger: TAGTTGTTGGCAAACGATGCATGCATACAATATGCC...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR CCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATCCACATTCTAATCTCTaGTCGACATTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHPHSNL*STLSPL
Trigger: AAGAGGAGACAATGTCGACCAGAGATTAGAATGTGG...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCGCATGCACACCCAGTTaGAAAAGGACTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSACTPS*KRTCSS
Trigger: GGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGC...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAATTTGCTTCATGCTTTaGGCATCTATCATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TPFIRFGRAESTCACEQAICFML*ASIIVA
Trigger: GGCAACTATGATAGATGCCCAAAGCATGAAGCAAAT...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACATTTCCATTGTTTCCTaGTGGTCTTGTTATCTGAGT +
Preference number: 4 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHISIVS*WSCYLS
Trigger: ACTCAGATAACAAGACCATCAGGAAACAATGGAAAT...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACCATCTTCTTCACTTaGCAGGTCATCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLTIFFT*QVIRHP
Trigger: GGGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGT...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TCCACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGACAACCATTGTCACTTaGGGCCCCTTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: STYQSFIAHINLKRDQIKTTIVT*GPFHTP
Trigger: AGGAGTGTGGAAGGGGCCTCAAGTGACAATGGTTGT...CTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCTCTTCTTGACATGTTaGGGCTTCGAGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLFLTC*GFESHH
Trigger: GTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGCTCTTCTTGACATGTTaGGGCTTCGAGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HLSILYCPHQLEERPNQELFLTC*GFESHH
Trigger: GTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAG...CTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTCCTCACTGTCACTGGTaGCAGATGACCGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTPHCHW*QMTGTL
Trigger: CAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGG...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAACGTTTGGTCCCTGAGTaGAGGGTATTCACATGGGCC +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKRLVPE*RVFTWA
Trigger: GGCCCATGTGAATACCCTTCACTCAGGGACCAAACG...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACCGTTTGGTCCCTGAGTaGAGGGTATTCACATGGGCC +
Preference number: 4 (lower is better)
Translates to: LSILYCPHQLEERPNQENRLVPE*RVFTWA
Trigger: GGCCCATGTGAATACCCTTCACTCAGGGACCAAACG...GTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATATCACTTATAACACCTaGGACAGCAGAAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHITYNT*DSRKDN
Trigger: GTTATCCTTTCTGCTGTCTCAGGTGTTATAAGTGAT...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGCAACCCGAGTCATGGCGGGTaGTTTCTGAGTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LYCPHQLEERPNQENKSNPSHGG*FLSLFL
Trigger: CAAGAAGAGACTCAGAAAGCACCCGCCATGACTCGG...GTTGCTTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR GCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACGACCGGAGAAGCCTCTaGAATATATCGGGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHDRRSL*NISGER
Trigger: ACGCTCGCCCGATATATTGCAGAGGCTTCTCCGGTC...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR CCA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTGCTCCAATCTTCTTTTaGTACCACGATATAGCATCT +
Preference number: 4 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPAPIFF*YHDIAS
Trigger: AGATGCTATATCGTGGTACCAAAAGAAGATTGGAGC...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACCCCGATCTAGAGCCCTaGCTGAAGGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHPDLEP*LKAADS
Trigger: TGAATCAGCAGCCTTCAGCCAGGGCTCTAGATCGGG...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACCCCGATCTAGAGCCCTaGCTGAAGGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: LSILYCPHQLEERPNQENPDLEP*LKAADS
Trigger: TGAATCAGCAGCCTTCAGCCAGGGCTCTAGATCGGG...GTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACTCAGTCTCCGAGTCATaGCGGGTGCTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHSVSES*RVLSES
Trigger: AGACTCAGAAAGCACCCGCCATGACTCGGAGACTGA...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGACCATCTTCTTCACTTaGCAGGTCATCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: HLSILYCPHQLEERPNQETIFFT*QVIRHP
Trigger: GGGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGT...CTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAACAACCATTGTCACTTaGGGCCCCTTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLTTIVT*GPFHTP
Trigger: AGGAGTGTGGAAGGGGCCTCAAGTGACAATGGTTGT...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACGTCACGTTTGGTCCCTaGGTGAAGGGTATTCACATG +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHVTFGP*VKGIHM
Trigger: CATGTGAATACCCTTCACTCAGGGACCAAACGTGAC...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGCAGTCACGTTTGGTCCCTaGGTGAAGGGTATTCACATG +
Preference number: 4 (lower is better)
Translates to: SFIAHINLKRDQIKRTKAVTFGP*VKGIHM
Trigger: CATGTGAATACCCTTCACTCAGGGACCAAACGTGAC...TGCTTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTTACAACCACATCAACTaGACGCTGTGGCCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTYNHIN*TLWPPS
Trigger: AGACGGGGGCCACAGCGTTCAGTTGATGTGGTTGTA...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATCAGTCTTTAGTCAGCTaGCTATTCATGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHQSLVS*LFMLFE
Trigger: TTCAAACAACATGAATAGTCAGCTGACTAAAGACTG...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTCCGAGTCATGGCGGGTaGTTTCTGAGTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSPSHGG*FLSLFL
Trigger: CAAGAAGAGACTCAGAAAGCACCCGCCATGACTCGG...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCCCCCTCCCAGATTATTaGACTAACTCGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSPLPDY*TNSIRG
Trigger: TCCTCTGATCGAGTTAGTGCAATAATCTGGGAGGGG...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCAGGTGTAACAGGTGGTaGCCCACAAAAGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSRCNRW*PTKESQ
Trigger: TTGACTCTCTTTTGTGGGGCACCACCTGTTACACCT...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACGGCTTTGTGCCCAGCTaGAAAAGACAGGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHGFVPS*KRQVQR
Trigger: CCTTTGCACCTGTCTTTTCCAGCTGGGCACAAAGCC...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAAGTTACTCTCCCAGTTTaGGTAGGACGCGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKVTLPV*VGRENR
Trigger: GCGGTTTTCGCGTCCTACCCAAACTGGGAGAGTAAC...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR CCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATCAGTCTCCGAGTCATaGCGGGTGCTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKSVSES*RVLSES
Trigger: AGACTCAGAAAGCACCCGCCATGACTCGGAGACTGA...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACATCAGTCTCCGAGTCATaGCGGGTGCTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTSVSES*RVLSES
Trigger: AGACTCAGAAAGCACCCGCCATGACTCGGAGACTGA...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAATCAGTCTCCGAGTCATaGCGGGTGCTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QSFIAHINLKRDQIKRTKSVSES*RVLSES
Trigger: AGACTCAGAAAGCACCCGCCATGACTCGGAGACTGA...TTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCTTTGGGGTCACGTTTaGTCCCTGAGTGAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLWGHV*SLSEGY
Trigger: ATACCCTTCACTCAGGGACCAAACGTGACCCCAAAG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGCTTTGGGGTCACGTTTaGTCCCTGAGTGAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: HLSILYCPHQLEERPNQELWGHV*SLSEGY
Trigger: ATACCCTTCACTCAGGGACCAAACGTGACCCCAAAG...CTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp AGGAACCACAACTCAGATGATCTATATGGAAACAATGCTTCCATGGCTTCCACAAATAGGTGTAACAGGTaGTGCCCCACAAAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RNHNSDDLYGNNASMASTNRCNR*CPTKES
Trigger: ACTCTCTTTTGTGGGGCACCACCTGTTACACCTATT...TGTGGAAGCCATGGAAGCATTGTTTCCATATAGATCATCTGAGTTGTGGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR CCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTCCAGCCAGAGAATaGGATTTCACTAGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQSPARE*DFTSAR
Trigger: ACGGGCACTAGTGAAATCCCATTCTCTGGCTGGAGA...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACTCTCCAGCCAGAGAATaGGATTTCACTAGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHSPARE*DFTSAR
Trigger: ACGGGCACTAGTGAAATCCCATTCTCTGGCTGGAGA...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR TCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAAAGGAAAACCAATCGGTaGGTCCAGCTGCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKRKTNR*VQLLKV
Trigger: AACCTTCAGCAGCTGGACTCACCGATTGGTTTTCCT...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAACCATCTTCTTCACTTaGCAGGTCATCAGACACCCC +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTTIFFT*QVIRHP
Trigger: GGGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGT...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCTGTCCTTGGAGAACCTaGGCACAACAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSCPWRT*AQQMKA
Trigger: TGCTTTCATTTGTTGTGCTCAGGTTCTCCAAGGACA...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGGAGCACCTGTGCATGTaGACAAGCAGGTGGGTATCT +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVEHLCM*TSRWVS
Trigger: AGATACCCACCTGCTTGTTCACATGCACAGGTGCTC...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTACAGCAAAAGGCTTTGTaGCCAGCTGGAAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLQQKAL*PAGKDR
Trigger: CCTGTCTTTTCCAGCTGGGCACAAAGCCTTTTGCTG...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369600.5
ENST00000369604.6
CDS-3UTR GCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACCCCCTCCCAGATTATTaGACTAACTCGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHPLPDY*TNSIRG
Trigger: TCCTCTGATCGAGTTAGTGCAATAATCTGGGAGGGG...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAGGTGTAACAGGTGGTaGCCCACAAAAGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: HLSILYCPHQLEERPNQERCNRW*PTKESQ
Trigger: TTGACTCTCTTTTGTGGGGCACCACCTGTTACACCT...CTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR GCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCAGTTGGAAAAGGACTTaGTCCTCCGGAAACACCATT +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSSWKRT*SSGNTI
Trigger: AATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACT...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAGCCTCTCCATGAGCTaGTCTTTCTCCAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTSLSMS*SFSSCL
Trigger: CAAACAGCTGGAGAAAGAGCAGCTCATGGAGAGGCT...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR CCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTTCTCCTCAGCTGAAATaGACTTTAGTTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLSPQLK*TLVGQG
Trigger: GCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGA...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTAATAGGTGTAACAGGTaGTGCCCCACAAAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLNRCNR*CPTKES
Trigger: ACTCTCTTTTGTGGGGCACCACCTGTTACACCTATT...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCTGAGTCTGTTCGATTaGCTTTTCCCATATCTGCTG +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLSLFD*LFPYLL
Trigger: CAGCAGATATGGGAAAAGTCAATCGAACAGACTCAG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAGAATCCCGCACAATATaGCACCACCTTGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLESRTI*HHLVVV
Trigger: AACCACTACAAGGTGGTGTCATATTGTGCGGGATTC...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGAATCCCGCACAATATaGCACCACCTTGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: QSFIAHINLKRDQIKRTKESRTI*HHLVVV
Trigger: AACCACTACAAGGTGGTGTCATATTGTGCGGGATTC...TTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACTTCAGCCAGACTATCTaGATCCCGCACAATATGACA +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHFSQTI*IPHNMT
Trigger: TGTCATATTGTGCGGGATTCAGATAGTCTGGCTGAA...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGCAACTTCAGCCAGACTATCTaGATCCCGCACAATATGACA +
Preference number: 4 (lower is better)
Translates to: LYCPHQLEERPNQENKSNFSQTI*IPHNMT
Trigger: TGTCATATTGTGCGGGATTCAGATAGTCTGGCTGAA...GTTGCTTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGGTCACGTTTGGTCCCTaGGTGAAGGGTATTCACATG +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVVTFGP*VKGIHM
Trigger: CATGTGAATACCCTTCACTCAGGGACCAAACGTGAC...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTGTCACGTTTGGTCCCTaGGTGAAGGGTATTCACATG +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTVTFGP*VKGIHM
Trigger: CATGTGAATACCCTTCACTCAGGGACCAAACGTGAC...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTCCTGAGCACAACAAATaGAAGCAATCGAAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLPEHNK*KQSKVS
Trigger: TGACACTTTCGATTGCTTTCATTTGTTGTGCTCAGG...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACTGTCCTTGGAGAACCTaGGCACAACAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHCPWRT*AQQMKA
Trigger: TGCTTTCATTTGTTGTGCTCAGGTTCTCCAAGGACA...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTTATCATCTGTGTCCGTaGTTCACCATCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLYHLCP*FTIFFT
Trigger: AGTGAAGAAGATGGTGAAGCACGGACACAGATGATA...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp TATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACACCCCTCCCAGATTATTaGACTAACTCGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: YQSFIAHINLKRDQIKRTPLPDY*TNSIRG
Trigger: TCCTCTGATCGAGTTAGTGCAATAATCTGGGAGGGG...TGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTAACGTCAATCAAGTCTaGCTTTATGTGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLNVNQV*LYVAHL
Trigger: AAGATGGGCCACATAAAGCCAGACTTGATTGACGTT...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCCCACATTCTAATCTCTaGTCGACATTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSPHSNL*STLSPL
Trigger: AAGAGGAGACAATGTCGACCAGAGATTAGAATGTGG...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGG +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHEMDFS*SRLFSR
Trigger: CCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTC...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TCCACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGTCTCCTCAGCTGAAATaGACTTTAGTTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: STYQSFIAHINLKRDQIKSPQLK*TLVGQG
Trigger: GCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGA...CTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp AGGAACCACAACTCAGATGATCTATATGGAAACAATGCTTCCATGGCTTCCACATCCATAGAGTCTAAATaGTGTGTCCAGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RNHNSDDLYGNNASMASTSIESK*CVQLFQ
Trigger: TTGAAAGAGCTGGACACACCATTTAGACTCTATGGA...TGTGGAAGCCATGGAAGCATTGTTTCCATATAGATCATCTGAGTTGTGGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACATTCAGCCAGACTATCTaGATCCCGCACAATATGACA +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTFSQTI*IPHNMT
Trigger: TGTCATATTGTGCGGGATTCAGATAGTCTGGCTGAA...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACATGTCCTTGGAGAACCTaGGCACAACAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTCPWRT*AQQMKA
Trigger: TGCTTTCATTTGTTGTGCTCAGGTTCTCCAAGGACA...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSLIGKF*YQPGES
Trigger: ACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAA...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTAGGTGTAACAGGTGGTaGCCCACAAAAGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTRCNRW*PTKESQ
Trigger: TTGACTCTCTTTTGTGGGGCACCACCTGTTACACCT...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAAGTTGGAAAAGGACTTaGTCCTCCGGAAACACCATT +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLSWKRT*SSGNTI
Trigger: AATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACT...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCTTTCTCCAGCTGTTTaGCAGGGAAAACACAACAAA +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLSPAV*QGKHNK
Trigger: TTTGTTGTGTTTTCCCTGGCAAACAGCTGGAGAAAG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR CCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTGCTCCAATCTTCTTTTaGTACCACGATATAGCATCT +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLAPIFF*YHDIAS
Trigger: AGATGCTATATCGTGGTACCAAAAGAAGATTGGAGC...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAAGTCTGGCTTTATGTaGCCCATCTTTTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHKSGFM*PIFFGL
Trigger: CAAACCGAAAAAGATGGGCCACATAAAGCCAGACTT...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAACGTCAATCAAGTCTaGCTTTATGTGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHNVNQV*LYVAHL
Trigger: AAGATGGGCCACATAAAGCCAGACTTGATTGACGTT...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGGATGGACACAACTTaGGTCATTGTCAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHRMDTT*VIVSFS
Trigger: ACTGAAACTGACAATGACCCAAGTTGTGTCCATCCT...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACCCACATTCTAATCTCTaGTCGACATTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHPHSNL*STLSPL
Trigger: AAGAGGAGACAATGTCGACCAGAGATTAGAATGTGG...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGG +
Preference number: 4 (lower is better)
Translates to: SILYCPHQLEERPNQENKEMDFS*SRLFSR
Trigger: CCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTC...TTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTATCTCCTCAGCTGAAATaGACTTTAGTTGGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLSPQLK*TLVGQG
Trigger: GCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGA...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAAATAGGTGTAACAGGTaGTGCCCCACAAAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLNRCNR*CPTKES
Trigger: ACTCTCTTTTGTGGGGCACCACCTGTTACACCTATT...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp CAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAAATAGGTGTAACAGGTaGTGCCCCACAAAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: QSFIAHINLKRDQIKRTKNRCNR*CPTKES
Trigger: ACTCTCTTTTGTGGGGCACCACCTGTTACACCTATT...TTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLRWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAGGTGGGTATCTCACTaGTTTCTGCAGTCATCACTT +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTRWVSH*FLQSSL
Trigger: AAGTGATGACTGCAGAAACCAGTGAGATACCCACCT...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCATTTGCTTCATGCTTTaGGCATCTATCATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSICFML*ASIIVA
Trigger: GGCAACTATGATAGATGCCCAAAGCATGAAGCAAAT...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTGTGGTTTTCTTTACCTaGGAGTTTAGGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSVVFFT*EFRCLE
Trigger: TTCAAGGCACCTAAACTCTCAGGTAAAGAAAACCAC...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAGTGGTTTTCTTTACCTaGGAGTTTAGGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLVVFFT*EFRCLE
Trigger: TTCAAGGCACCTAAACTCTCAGGTAAAGAAAACCAC...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGTGGTTTTCTTTACCTaGGAGTTTAGGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: QSFIAHINLKRDQIKRTKVVFFT*EFRCLE
Trigger: TTCAAGGCACCTAAACTCTCAGGTAAAGAAAACCAC...TTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR TCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTCAGCCAGACTATCTaGATCCCGCACAATATGACA +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVFSQTI*IPHNMT
Trigger: TGTCATATTGTGCGGGATTCAGATAGTCTGGCTGAA...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTACCTGAGCACAACAAATaGAAGCAATCGAAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLPEHNK*KQSKVS
Trigger: TGACACTTTCGATTGCTTTCATTTGTTGTGCTCAGG...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACACCTGAGCACAACAAATaGAAGCAATCGAAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTPEHNK*KQSKVS
Trigger: TGACACTTTCGATTGCTTTCATTTGTTGTGCTCAGG...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTCAGTCTTTAGTCAGCTaGCTATTCATGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLQSLVS*LFMLFE
Trigger: TTCAAACAACATGAATAGTCAGCTGACTAAAGACTG...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp TTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACTTGCCCACATCAACTTaGAGAGAGACCAAATCAAGA +
Preference number: 4 (lower is better)
Translates to: LSILYCPHQLEERPNQENLPTST*RETKSR
Trigger: TCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAA...GTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR GCA 90 bp CAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAATATCATCTGTGTCCGTaGTTCACCATCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: QSFIAHINLKRDQIKRTKYHLCP*FTIFFT
Trigger: AGTGAAGAAGATGGTGAAGCACGGACACAGATGATA...TTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR GCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTGGCATCTATCATAGTTaGCCAAAAGACTATGTCCAG +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSGIYHS*PKDYVQ
Trigger: CTGGACATAGTCTTTTGGGCAACTATGATAGATGCC...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCAAGCAGAGAATGAACTaGAAAATGAGGGGGATTAAA +
Preference number: 4 (lower is better)
Translates to: DICFMLWASIIVAQKTMSKQRMN*KMRGIK
Trigger: TTTAATCCCCCTCATTTTCCAGTTCATTCTCTGCTT...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR TCA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTTCAAACCCTTAATCTaGGTCTGTTCGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQFKPLI*VCSIDF
Trigger: AAAGTCAATCGAACAGACTCAGATTAAGGGTTTGAA...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACCAAATGTTGACCCTCTaGTTAAGTCAACGTCAATCA +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHQMLTL*LSQRQS
Trigger: TGATTGACGTTGACTTAATCAGAGGGTCAACATTTG...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAACAAATGTTGACCCTCTaGTTAAGTCAACGTCAATCA +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKQMLTL*LSQRQS
Trigger: TGATTGACGTTGACTTAATCAGAGGGTCAACATTTG...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGCTTAAAGAGGTAACCTaGATCCACCAATTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVLKEVT*IHQLLN
Trigger: GTTCAGCAATTGGTGGATTCAGGTTACCTCTTTAAG...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAAATCACTTATAACACCTaGGACAGCAGAAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKITYNT*DSRKDN
Trigger: GTTATCCTTTCTGCTGTCTCAGGTGTTATAAGTGAT...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACGAACCACAACTCAGATaGTCTATATGGAAACAATGC +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHEPQLR*SIWKQC
Trigger: GCATTGTTTCCATATAGATCATCTGAGTTGTGGTTC...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR TCA 90 bp CTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGCAACTCCTTATTTCTCCACTaGCCTGTTTATATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LYCPHQLEERPNQENKSNSLFLH*PVYMFS
Trigger: AGAGAACATATAAACAGGTCAGTGGAGAAATAAGGA...GTTGCTTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAGCTCCAATCTTCTTTTaGTACCACGATATAGCATCT +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTAPIFF*YHDIAS
Trigger: AGATGCTATATCGTGGTACCAAAAGAAGATTGGAGC...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTGCTCCAATCTTCTTTTaGTACCACGATATAGCATCT +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSAPIFF*YHDIAS
Trigger: AGATGCTATATCGTGGTACCAAAAGAAGATTGGAGC...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGAAGTCTGGCTTTATGTaGCCCATCTTTTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVKSGFM*PIFFGL
Trigger: CAAACCGAAAAAGATGGGCCACATAAAGCCAGACTT...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTAGGATGGACACAACTTaGGTCATTGTCAGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTRMDTT*VIVSFS
Trigger: ACTGAAACTGACAATGACCCAAGTTGTGTCCATCCT...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTCTCTTAATGATAGGATaGACACAACTTGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSLLMIG*TQLGSL
Trigger: CAATGACCCAAGTTGTGTCCATCCTATCATTAAGAG...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTACTCTTAATGATAGGATaGACACAACTTGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLLLMIG*TQLGSL
Trigger: CAATGACCCAAGTTGTGTCCATCCTATCATTAAGAG...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTGCTGTATTTCTTATTaGTTTCAGACCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVCCISY*FQTPVR
Trigger: CCTCACTGGGGTCTGAAACCAATAAGAAATACAGCA...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTTGCTGTATTTCTTATTaGTTTCAGACCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IKDICFMLWASIIVAQKTCCISY*FQTPVR
Trigger: CCTCACTGGGGTCTGAAACCAATAAGAAATACAGCA...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTATCCATAGAGTCTAAATaGTGTGTCCAGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLSIESK*CVQLFQ
Trigger: TTGAAAGAGCTGGACACACCATTTAGACTCTATGGA...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACTTCAAACCCTTAATCTaGGTCTGTTCGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHFKPLI*VCSIDF
Trigger: AAAGTCAATCGAACAGACTCAGATTAAGGGTTTGAA...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACATTTCCATTGTTTCCTaGTGGTCTTGTTATCTGAGT +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHISIVS*WSCYLS
Trigger: ACTCAGATAACAAGACCATCAGGAAACAATGGAAAT...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR TCA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACACAGTCTTTAGTCAGCTaGCTATTCATGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTQSLVS*LFMLFE
Trigger: TTCAAACAACATGAATAGTCAGCTGACTAAAGACTG...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CCA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAAAGCAGAGAATGAACTaGAAAATGAGGGGGATTAAA +
Preference number: 4 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLKQRMN*KMRGIK
Trigger: TTTAATCCCCCTCATTTTCCAGTTCATTCTCTGCTT...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
CDS-3UTR GCA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAACCAATAAAAGATATTTaGTTCATGCTTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKPIKDI*FMLWAS
Trigger: AGATGCCCAAAGCATGAAGCAAATATCTTTTATTGG...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACCCAATAAAAGATATTTaGTTCATGCTTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHPIKDI*FMLWAS
Trigger: AGATGCCCAAAGCATGAAGCAAATATCTTTTATTGG...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR GCA 90 bp ACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGATTATCAATCCTTTATTaGCCACATCAACTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: TYQSFIAHINLKRDQIKRLSILY*PHQLEE
Trigger: CTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAA...TCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR GCA 90 bp AGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTATGCATGCATCGTTTaGCAACAACTATACAGTTAT +
Preference number: 4 (lower is better)
Translates to: SKHNCHSTEAQTYKIVFVYACIV*QQLYSY
Trigger: ATAACTGTATAGTTGTTGGCAAACGATGCATGCATA...CACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS GCA 90 bp CCGCCTCCTTCGCTCGCCCGCGTCCGGCTCTCACCTAGTGCCCGTTaGCCCGCGGGCCGGCGCCCGGGACCTCCGTCCTCAGTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PPPSLARVRLSPSAR*PAGRRPGPPSSVPG
Trigger: CCCGGGCACTGAGGACGGAGGTCCCGGGCGCCGGCCCGCGGGGCAACGGGCACTAGGTGAGAGCCGGACGCGGGCGAGCGAAGGAGGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393357.6
ENST00000446739.1
ENST00000493212.1
CDS TCA 90 bp GCGGAGGCCGCCCCAGCTTCGGAGGCAGCCGGCCGCCCAGCGCCCTaGGGGCGGCAAATCGATCGCCGGTCAGAGGCCGCCTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: AEAAPASEAAGRPAP*GRQIDRRSEAAYRV
Trigger: GACCCTGTAGGCGGCCTCTGACCGGCGATCGATTTGCCGCCCTCAGGGCGCTGGGCGGCCGGCTGCCTCCGAAGCTGGGGCGGCCTCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000493212.1
CDS CCA 90 bp CCGCATCTTCCCCTCCAGGCGGAGACGCCGGAGAGGCCGTTACCATaGAGACCGCGGAGGCCGCCCCAGCTTCGGAGGCAGCCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: PHLPLQAETPERPLP*RPRRPPQLRRQPAA
Trigger: GGCGGCCGGCTGCCTCCGAAGCTGGGGCGGCCTCCGCGGTCTCCATGGTAACGGCCTCTCCGGCGTCTCCGCCTGGAGGGGAAGATGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000493212.1
CDS GCA 90 bp CTGGATGGTATTTCTGGACGCACTCTGGGCCAGAGGGGAGCCCGTTaGCCTGAAGGGAGATACCCAGGCCTATCAGCATTGACCACAAGC +
Preference number: 5 (lower is better)
Translates to: LDGISGRTLGQRGAR*PEGRYPGLSALTTS
Trigger: GCTTGTGGTCAATGCTGATAGGCCTGGGTATCTCCCTTCAGGGCAACGGGCTCCCCTCTGGCCCAGAGTGCGTCCAGAAATACCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS TCA 90 bp TCCCTGAGTGAAGGGTATTCACATGGGCCCCCTCACTGTCACTGGTaGCAGATGACCGGCACTCTGGGCCATGTAGCAGGTCGTCCCATA +
Preference number: 5 (lower is better)
Translates to: SLSEGYSHGPPHCHW*QMTGTLGHVAGRPI
Trigger: TATGGGACGACCTGCTACATGGCCCAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGGGGGCCCATGTGAATACCCTTCACTCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS CCA 90 bp AACAGCCTTGCAGTACTTGCTGCAGGCCTGGGGCAGCGGTGGCCATaGGGAGAGATTCCTCTGCTTGAGGAAACGGGAGAGAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: NSLAVLAAGLGQRWP*GEIPLLEETGEKNE
Trigger: CTCATTCTTCTCTCCCGTTTCCTCAAGCAGAGGAATCTCTCCCCATGGCCACCGCTGCCCCAGGCCTGCAGCAAGTACTGCAAGGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 90 bp GCCCTGATAGCGTCTCTGGATCTGCCCAGAGCTAGGGTAACTGGCTaGCCTAAAAGGAAGGACATAAGCCTGGCTGGATTTGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: ALIASLDLPRARVTG*PKRKDISLAGFATC
Trigger: GCAGGTGGCAAATCCAGCCAGGCTTATGTCCTTCCTTTTAGGGCAGCCAGTTACCCTAGCTCTGGGCAGATCCAGAGACGCTATCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 90 bp AGACACCAGCTGGGTGGCCAGGGAGTGCATTTTTGCCACCCTTACTaGAAAGCCAGGCAGTGTTGTTCACAGCCCAGGAAGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: RHQLGGQGVHFCHPY*KARQCCSQPRKRQK
Trigger: CTTCTGTCTCTTCCTGGGCTGTGAACAACACTGCCTGGCTTTGCAGTAAGGGTGGCAAAAATGCACTCCCTGGCCACCCAGCTGGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 90 bp CATGACCTATTGAGACACCAGCTGGGTGGCCAGGGAGTGCATTTTTaGCACCCTTACTGCAAAGCCAGGCAGTGTTGTTCACAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HDLLRHQLGGQGVHF*HPYCKARQCCSQPR
Trigger: CCTGGGCTGTGAACAACACTGCCTGGCTTTGCAGTAAGGGTGGCAAAAATGCACTCCCTGGCCACCCAGCTGGTGTCTCAATAGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 90 bp TTGCTGCAGGCCTGGGGCAGCGGTGGCCATGGGGAGAGATTCCTCTaGTTGAGGAAACGGGAGAGAAGAATGAGAAGGAGTTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LLQAWGSGGHGERFL*LRKRERRMRRSLSF
Trigger: AAAAGACAAACTCCTTCTCATTCTTCTCTCCCGTTTCCTCAAGCAGAGGAATCTCTCCCCATGGCCACCGCTGCCCCAGGCCTGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS-3UTR CAA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGGGTTACTCTCCCAGTTaGGGTAGGACGCGAAAACCG +
Preference number: 5 (lower is better)
Translates to: HSFALAELRAPVHVNKQVGYSPS*GRTRKP
Trigger: CGGTTTTCGCGTCCTACCCAAACTGGGAGAGTAACC...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS TCA 90 bp CCCAGTTTGGGTAGGACGCGAAAACCGCTTCTCTCAGCCTCTCCATaGGCTGCTCTTTCTCCAGCTGTTTGCCAGGGAAAACACAACAAA +
Preference number: 5 (lower is better)
Translates to: PSLGRTRKPLLSASP*AALSPAVCQGKHNK
Trigger: TTTGTTGTGTTTTCCCTGGCAAACAGCTGGAGAAAGAGCAGCTCATGGAGAGGCTGAGAGAAGCGGTTTTCGCGTCCTACCCAAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393357.6
ENST00000446739.1
ENST00000493212.1
CDS TCA 90 bp TGCCCTGAAGGGAGATACCCAGGCCTATCAGCATTGACCACAAGCTaGCCAAAGAGCCCTTGGACCTTGAGTGAATATCAGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: CPEGRYPGLSALTTS*PKSPWTLSEYQQQP
Trigger: AGGCTGTTGCTGATATTCACTCAAGGTCCAAGGGCTCTTTGGTCAGCTTGTGGTCAATGCTGATAGGCCTGGGTATCTCCCTTCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CCA 90 bp CCATGTAGCAGGTCGTCCCATAACATGTCCTCAGTCTCCGAGTCATaGCGGGTGCTTTCTGAGTCTCTTCTTGACATGTTGAGGCTTCGA +
Preference number: 5 (lower is better)
Translates to: PCSRSSHNMSSVSES*RVLSESLLDMLRLR
Trigger: TCGAAGCCTCAACATGTCAAGAAGAGACTCAGAAAGCACCCGCCATGACTCGGAGACTGAGGACATGTTATGGGACGACCTGCTACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS-3UTR CAA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGTCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: LLLRKHHSFALAELRAPVSLLDM*RLREPP
Trigger: TGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGA...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGCACCATTCATTCGCTTaGGCAGAGCTGAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: HSFALAELRAPVHVNKQVHHSFA*AELRAP
Trigger: AGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTG...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGAGCATGCACACCCAGTaGGAAAAGGACTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HSFALAELRAPVHVNKQVSMHTQ*EKDLLL
Trigger: GAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCT...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTTTAACTTCACAACCATaGTCACTTGAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LAPPETPFIRFGRAESTCLTSQP*SLEAPS
Trigger: GGAAGGGGCCTCAAGTGACAATGGTTGTGAAGTTAA...ACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACCACCATTCATTCGCTTaGGCAGAGCTGAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHHHSFA*AELRAP
Trigger: AGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTG...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCACACCATCTTCTTCACTaGACAGGTCATCAGACACCC +
Preference number: 5 (lower is better)
Translates to: TPFIRFGRAESTCACEQAHHLLH*TGHQTP
Trigger: GGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGTG...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCCTGATAACCTACTCCTaGCTGATAGGCATTGACCCT +
Preference number: 5 (lower is better)
Translates to: HAHPVGKGLAPPETPFIRLITYS*LIGIDP
Trigger: AGGGTCAATGCCTATCAGCAAGGAGTAGGTTATCAG...GCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACCAGTTGGAAAAGGACTaGCTCCTCCGGAAACACCAT +
Preference number: 5 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHQLEKD*LLRKHH
Trigger: ATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTG...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATTCTGAGTCTGTTCGATaGACTTTTCCCATATCTGCT +
Preference number: 5 (lower is better)
Translates to: LLRKHHSFALAELRAPVHSESVR*TFPISA
Trigger: AGCAGATATGGGAAAAGTCAATCGAACAGACTCAGA...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGAATCTCTGGTCGACATaGTCTCCTCTTAATGATAGG +
Preference number: 5 (lower is better)
Translates to: LLLRKHHSFALAELRAPVNLWST*SPLNDR
Trigger: CCTATCATTAAGAGGAGACAATGTCGACCAGAGATT...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPSLLDM*RLREPP
Trigger: TGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGA...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACCTGATAACCTACTCCTaGCTGATAGGCATTGACCCT +
Preference number: 5 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHLITYS*LIGIDP
Trigger: AGGGTCAATGCCTATCAGCAAGGAGTAGGTTATCAG...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATTTGCTGTATTTCTTATaGGTTTCAGACCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LLRKHHSFALAELRAPVHLLYFL*VSDPSE
Trigger: CTCACTGGGGTCTGAAACCAATAAGAAATACAGCAA...ATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATCACCATTCATTCGCTTaGGCAGAGCTGAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: VNKQVGISLVSAVITFLDHHSFA*AELRAP
Trigger: AGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTG...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCAGTTGGAAAAGGACTaGCTCCTCCGGAAACACCAT +
Preference number: 5 (lower is better)
Translates to: VHVNKQVGISLVSAVITFQLEKD*LLRKHH
Trigger: ATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTG...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS GCA 90 bp GTTCACAGCCCAGGAAGAGACAGAAGAGTAAAAAGGACTTTGTCTTaGAACTTGGATACCAGCTCAGCCAGAGTAGAACAAGGGACCAGA +
Preference number: 5 (lower is better)
Translates to: VHSPGRDRRVKRTLS*NLDTSSARVEQGTR
Trigger: TCTGGTCCCTTGTTCTACTCTGGCTGAGCTGGTATCCAAGTTGCAAGACAAAGTCCTTTTTACTCTTCTGTCTCTTCCTGGGCTGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS-3UTR CAA 90 bp ACCTGTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACGGCTCCAATCTTCTTTaGGTACCACGATATAGCATC +
Preference number: 5 (lower is better)
Translates to: TCACEQAGGYLTGFCSHHGSNLL*VPRYSI
Trigger: GATGCTATATCGTGGTACCAAAAGAAGATTGGAGCC...GTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGCTCCAATCTTCTTTaGGTACCACGATATAGCATC +
Preference number: 5 (lower is better)
Translates to: TPFIRFGRAESTCACEQAGSNLL*VPRYSI
Trigger: GATGCTATATCGTGGTACCAAAAGAAGATTGGAGCC...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAGGTGTCTGAGTCTGTTCGATaGACTTTTCCCATATCTGCT +
Preference number: 5 (lower is better)
Translates to: HSFALAELRAPVHVNKQVSESVR*TFPISA
Trigger: AGCAGATATGGGAAAAGTCAATCGAACAGACTCAGA...CACCTGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCACTGAGTAGACACAATTaGACAGTGGACAGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: TPFIRFGRAESTCACEQALSRHN*TVDSSH
Trigger: ATGGGAACTGTCCACTGTCAAATTGTGTCTACTCAG...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCTTCTTCGATTTCCATaGTTTCCTGATGGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: LLLRKHHSFALAELRAPVLLRFP*FPDGLV
Trigger: AACAAGACCATCAGGAAACAATGGAAATCGAAGAAG...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGACTCTTTTAATCCTGTaGCCAAAGATAGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: LRKHHSFALAELRAPVHVTLLIL*PKIVSQ
Trigger: TTGGGAGACTATCTTTGGCAACAGGATTAAAAGAGT...CACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGACTCTTTTAATCCTGTaGCCAAAGATAGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: LLLRKHHSFALAELRAPVTLLIL*PKIVSQ
Trigger: TTGGGAGACTATCTTTGGCAACAGGATTAAAAGAGT...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATCACCATCTTCTTCACTaGACAGGTCATCAGACACCC +
Preference number: 5 (lower is better)
Translates to: VNKQVGISLVSAVITFLDHHLLH*TGHQTP
Trigger: GGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGTG...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATCTGATAACCTACTCCTaGCTGATAGGCATTGACCCT +
Preference number: 5 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHLITYS*LIGIDP
Trigger: AGGGTCAATGCCTATCAGCAAGGAGTAGGTTATCAG...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGTATTTGCTTCATGCTTaGGGCATCTATCATAGTTGC +
Preference number: 5 (lower is better)
Translates to: LLLRKHHSFALAELRAPVYLLHA*GIYHSC
Trigger: GCAACTATGATAGATGCCCAAAGCATGAAGCAAATA...CACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS CCA 90 bp GTGACCAAAGACTTAGATCACAATGCCCAATTCCCCTCAAATACTTaGAAAGCCTTCCCAAGAAGGACAGGTACAAAGAAGCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: VTKDLDHNAQFPSNT*KAFPRRTGTKKPRL
Trigger: CAGTCTGGGCTTCTTTGTACCTGTCCTTCTTGGGAAGGCTTTCCAAGTATTTGAGGGGAATTGGGCATTGTGATCTAAGTCTTTGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS-3UTR CAA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTCTGAGTAGACACAATTaGACAGTGGACAGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPLSRHN*TVDSSH
Trigger: ATGGGAACTGTCCACTGTCAAATTGTGTCTACTCAG...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGATTGCTGTATTTCTTATaGGTTTCAGACCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRLLYFL*VSDPSE
Trigger: CTCACTGGGGTCTGAAACCAATAAGAAATACAGCAA...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS GCA 90 bp CACAAAAGTAGGTTCACAGTCCTCTCCACATCTTCTCAGACACAATaGAACTCCTACCTTATATCGTCTGTTATTGCCACTCCACTAGCC +
Preference number: 5 (lower is better)
Translates to: HKSRFTVLSTSSQTQ*NSYLISSVIATPLA
Trigger: GGCTAGTGGAGTGGCAATAACAGACGATATAAGGTAGGAGTTGCATTGTGTCTGAGAAGATGTGGAGAGGACTGTGAACCTACTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS-3UTR CAA 90 bp GTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATGGCTCCAATCTTCTTTaGGTACCACGATATAGCATC +
Preference number: 5 (lower is better)
Translates to: VNKQVGISLVSAVITFLDGSNLL*VPRYSI
Trigger: GATGCTATATCGTGGTACCAAAAGAAGATTGGAGCC...ATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACACCATTCATTCGCTTTGGCAGAGCTGAGAGCACCTGTGCATGTGAACAAGCAACTCTTTTAATCCTGTaGCCAAAGATAGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TPFIRFGRAESTCACEQATLLIL*PKIVSQ
Trigger: TTGGGAGACTATCTTTGGCAACAGGATTAAAAGAGT...TGCTTGTTCACATGCACAGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTAATCTCTGGTCGACATaGTCTCCTCTTAATGATAGG +
Preference number: 5 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPNLWST*SPLNDR
Trigger: CCTATCATTAAGAGGAGACAATGTCGACCAGAGATT...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTAGCATGCACACCCAGTaGGAAAAGGACTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLSMHTQ*EKDLLL
Trigger: GAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCT...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS TCA 90 bp TCTCACTGGTTTCTGCAGTCATCACTTTCCTTGATAGGTAAGTTTTaGTACCAGCCAGGGGAGAGTCCAGGCATTTACTCAGCTTATGAT +
Preference number: 5 (lower is better)
Translates to: SHWFLQSSLSLIGKF*YQPGESPGIYSAYD
Trigger: ATCATAAGCTGAGTAAATGCCTGGACTCTCCCCTGGCTGGTATCAAAACTTACCTATCAAGGAAAGTGATGACTGCAGAAACCAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000474926.5
CDS GCA 90 bp ATCTTCTCAGACACAATGCAACTCCTACCTTATATCGTCTGTTATTaGCACTCCACTAGCCCAGTAGACTTAGGTGCACATGACCTATTG +
Preference number: 5 (lower is better)
Translates to: IFSDTMQLLPYIVCY*HSTSPVDLGAHDLL
Trigger: CAATAGGTCATGTGCACCTAAGTCTACTGGGCTAGTGGAGTGGCAATAACAGACGATATAAGGTAGGAGTTGCATTGTGTCTGAGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS-3UTR CAA 90 bp GCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTCTTCTTCGATTTCCATaGTTTCCTGATGGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: ACEQAGGYLTGFCSHHFPLLRFP*FPDGLV
Trigger: AACAAGACCATCAGGAAACAATGGAAATCGAAGAAG...AGGAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACCACCATTCATTCGCTTaGGCAGAGCTGAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHHHSFA*AELRAP
Trigger: AGGTGCTCTCAGCTCTGCCAAAGCGAATGAATGGTG...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGAGCATGCACACCCAGTaGGAAAAGGACTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQSMHTQ*EKDLLL
Trigger: GAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCT...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATTCGCTTTGGCAGACTTACAAAATTGTCTTaGTGTTACCACAACACACAC +
Preference number: 5 (lower is better)
Translates to: PVGKGLAPPETPFIRFGRLTKLS*CYHNTH
Trigger: GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAG...TCTGCCAAAGCGAATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TCCACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGCACCATCTTCTTCACTaGACAGGTCATCAGACACCC +
Preference number: 5 (lower is better)
Translates to: STYQSFIAHINLKRDQIKHHLLH*TGHQTP
Trigger: GGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGTG...CTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CAA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCTTAACTTCACAACCATaGTCACTTGAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: DICFMLWASIIVAQKTMSLTSQP*SLEAPS
Trigger: GGAAGGGGCCTCAAGTGACAATGGTTGTGAAGTTAA...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAAAAGCATCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: SFIAHINLKRDQIKRTKASLLDM*RLREPP
Trigger: TGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGA...TGCTTTTGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTGACATATCCATCTTTTaGCACTCATTCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLDISIF*HSFPSQ
Trigger: CTGGGAGGGGAATGAGTGCAAAAAGATGGATATGTC...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACCAGTTGGAAAAGGACTaGCTCCTCCGGAAACACCAT +
Preference number: 5 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHQLEKD*LLRKHH
Trigger: ATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTG...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAGCATGCACACCCAGTaGGAAAAGGACTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTSMHTQ*EKDLLL
Trigger: GAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCT...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GTGCATGTGAACAAGCAGGTGGGTATCTCACTGGTTTCTGCAGTCATCACTTTCCTTACAAAATTGTCTTaGTGTTACCACAACACACAC +
Preference number: 5 (lower is better)
Translates to: VHVNKQVGISLVSAVITFLTKLS*CYHNTH
Trigger: GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAG...GAAAGTGATGACTGCAGAAACCAGTGAGATACCCACCTGCTTGTTCACATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TTAGCATGCACACCCAGTTGGAAAAGGACTTGCTCCTCCGGAAACACCATTCATCTTACAAAATTGTCTTaGTGTTACCACAACACACAC +
Preference number: 5 (lower is better)
Translates to: LACTPSWKRTCSSGNTIHLTKLS*CYHNTH
Trigger: GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAG...ATGAATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTGGGTGTGCATGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS TCA 90 bp GGGCAACAAGAGCGAAACTCTTCTTCTTCGATTTCCATTGTTTCCTaGTGGTCTTGTTATCTGAGTAGACACAATTTGACAGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: GQQERNSSSSISIVS*WSCYLSRHNLTVDS
Trigger: ACTGTCCACTGTCAAATTGTGTCTACTCAGATAACAAGACCATCAGGAAACAATGGAAATCGAAGAAGAAGAGTTTCGCTCTTGTTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472612.5
CDS CCA 90 bp CCACAAAAGAGAGTCAAGATCTCCTCAGCTGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGGAAAAGTCGATGTAAGAATGGAAAA +
Preference number: 5 (lower is better)
Translates to: PQKRVKISSAEMDFS*SRLFSRKSRCKNGK
Trigger: TTTTCCATTCTTACATCGACTTTTCCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGATCTTGACTCTCTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS-3UTR CAA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACACACCATCTTCTTCACTaGACAGGTCATCAGACACCC +
Preference number: 5 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTHHLLH*TGHQTP
Trigger: GGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGTG...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTACACCATCTTCTTCACTaGACAGGTCATCAGACACCC +
Preference number: 5 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLHHLLH*TGHQTP
Trigger: GGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGTG...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACTTAACTTCACAACCATaGTCACTTGAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHLTSQP*SLEAPS
Trigger: GGAAGGGGCCTCAAGTGACAATGGTTGTGAAGTTAA...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTTAACTTCACAACCATaGTCACTTGAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLTSQP*SLEAPS
Trigger: GGAAGGGGCCTCAAGTGACAATGGTTGTGAAGTTAA...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGTTAACTTCACAACCATaGTCACTTGAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HLSILYCPHQLEERPNQELTSQP*SLEAPS
Trigger: GGAAGGGGCCTCAAGTGACAATGGTTGTGAAGTTAA...CTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CAA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSSLLDM*RLREPP
Trigger: TGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGA...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKSLLDM*RLREPP
Trigger: TGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGA...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGGACATATCCATCTTTTaGCACTCATTCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQDISIF*HSFPSQ
Trigger: CTGGGAGGGGAATGAGTGCAAAAAGATGGATATGTC...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACGACATATCCATCTTTTaGCACTCATTCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHDISIF*HSFPSQ
Trigger: CTGGGAGGGGAATGAGTGCAAAAAGATGGATATGTC...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCTGATAACCTACTCCTaGCTGATAGGCATTGACCCT +
Preference number: 5 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLITYS*LIGIDP
Trigger: AGGGTCAATGCCTATCAGCAAGGAGTAGGTTATCAG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACCAGTTGGAAAAGGACTaGCTCCTCCGGAAACACCAT +
Preference number: 5 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHQLEKD*LLRKHH
Trigger: ATGGTGTTTCCGGAGGAGCAAGTCCTTTTCCAACTG...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS CCA 90 bp CACATTCTAATCTCTGGTCGACATTGTCTCCTCTTAATGATAGGATaGACACAACTTGGGTCATTGTCAGTTTCAGTCCCTTTGTTAGAT +
Preference number: 5 (lower is better)
Translates to: HILISGRHCLLLMIG*TQLGSLSVSVPLLD
Trigger: ATCTAACAAAGGGACTGAAACTGACAATGACCCAAGTTGTGTCCATCCTATCATTAAGAGGAGACAATGTCGACCAGAGATTAGAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000474926.5
CDS-3UTR CAA 90 bp ACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACGGCTCCAATCTTCTTTaGGTACCACGATATAGCATC +
Preference number: 5 (lower is better)
Translates to: TVLKRKLTKLSLCYHNTHGSNLL*VPRYSI
Trigger: GATGCTATATCGTGGTACCAAAAGAAGATTGGAGCC...GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTAATCTCTGGTCGACATaGTCTCCTCTTAATGATAGG +
Preference number: 5 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLNLWST*SPLNDR
Trigger: CCTATCATTAAGAGGAGACAATGTCGACCAGAGATT...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACAGACATATCCATCTTTTaGCACTCATTCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: YQSFIAHINLKRDQIKRTDISIF*HSFPSQ
Trigger: CTGGGAGGGGAATGAGTGCAAAAAGATGGATATGTC...TGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CAA 90 bp TATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAACACTGATAACCTACTCCTaGCTGATAGGCATTGACCCT +
Preference number: 5 (lower is better)
Translates to: YQSFIAHINLKRDQIKRTLITYS*LIGIDP
Trigger: AGGGTCAATGCCTATCAGCAAGGAGTAGGTTATCAG...TGTTCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTTTGCTGTATTTCTTATaGGTTTCAGACCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLLLYFL*VSDPSE
Trigger: CTCACTGGGGTCTGAAACCAATAAGAAATACAGCAA...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACCTGAGTAGACACAATTaGACAGTGGACAGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHLSRHN*TVDSSH
Trigger: ATGGGAACTGTCCACTGTCAAATTGTGTCTACTCAG...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCCTTCTTCGATTTCCATaGTTTCCTGATGGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: DICFMLWASIIVAQKTMSLLRFP*FPDGLV
Trigger: AACAAGACCATCAGGAAACAATGGAAATCGAAGAAG...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTGACATATCCATCTTTTaGCACTCATTCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: IKDICFMLWASIIVAQKTDISIF*HSFPSQ
Trigger: CTGGGAGGGGAATGAGTGCAAAAAGATGGATATGTC...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTTATTTGCTTCATGCTTaGGGCATCTATCATAGTTGC +
Preference number: 5 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLYLLHA*GIYHSC
Trigger: GCAACTATGATAGATGCCCAAAGCATGAAGCAAATA...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTATGTCCTATTTGCTTCATGCTTaGGGCATCTATCATAGTTGC +
Preference number: 5 (lower is better)
Translates to: DICFMLWASIIVAQKTMSYLLHA*GIYHSC
Trigger: GCAACTATGATAGATGCCCAAAGCATGAAGCAAATA...GGACATAGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACATCTTTCTCCAGCTGTTaGCCAGGGAAAACACAACAA +
Preference number: 5 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTSFSSC*PGKTQQ
Trigger: TTGTTGTGTTTTCCCTGGCAAACAGCTGGAGAAAGA...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393357.6
CDS-3UTR CAA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTATCTGAGTCTGTTCGATaGACTTTTCCCATATCTGCT +
Preference number: 5 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLSESVR*TFPISA
Trigger: AGCAGATATGGGAAAAGTCAATCGAACAGACTCAGA...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp CCCAAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTCCCATCTTTTTCGGTTaGTTTTTCAAACCCTTAATC +
Preference number: 5 (lower is better)
Translates to: PKRLCPVNITVTVLKRKLPIFFG*FFKPLI
Trigger: GATTAAGGGTTTGAAAAACAAACCGAAAAAGATGGG...AAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGCTTCTTCGATTTCCATaGTTTCCTGATGGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: STEAQTYKIVFVLPQHTQLLRFP*FPDGLV
Trigger: AACAAGACCATCAGGAAACAATGGAAATCGAAGAAG...CTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp AAAAGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAATCTCTGGTCGACATaGTCTCCTCTTAATGATAGG +
Preference number: 5 (lower is better)
Translates to: KRLCPVNITVTVLKRKLTNLWST*SPLNDR
Trigger: CCTATCATTAAGAGGAGACAATGTCGACCAGAGATT...TGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACTTGCTGTATTTCTTATaGGTTTCAGACCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: ITVTVLKRKLTKLSLCYHLLYFL*VSDPSE
Trigger: CTCACTGGGGTCTGAAACCAATAAGAAATACAGCAA...GTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp ACTTATCAATCCTTTATTGCCCACATCAACTTGAAGAGAGACCAAATCAAGAGAATTGCCCACATCAACTaGAAGAGAGACCAAATCAAG +
Preference number: 5 (lower is better)
Translates to: TYQSFIAHINLKRDQIKRIAHIN*KRDQIK
Trigger: CTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAAT...TCTCTTGATTTGGTCTCTCTTCAAGTTGATGTGGGCAATAAAGGATTGATAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412670.1
CDS-3UTR CAA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATATTTGCTTCATGCTTaGGGCATCTATCATAGTTGC +
Preference number: 5 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKYLLHA*GIYHSC
Trigger: GCAACTATGATAGATGCCCAAAGCATGAAGCAAATA...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTAGAATTACATGGCATATaGTATGCATGCATCGTTTGC +
Preference number: 5 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLELHGI*YACIVC
Trigger: GCAAACGATGCATGCATACAATATGCCATGTAATTC...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369604.6
CDS-3UTR CAA 90 bp AGACTATGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAACCCATCTTTTTCGGTTaGTTTTTCAAACCCTTAATC +
Preference number: 5 (lower is better)
Translates to: RLCPVNITVTVLKRKLTKPIFFG*FFKPLI
Trigger: GATTAAGGGTTTGAAAAACAAACCGAAAAAGATGGG...TTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACATAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp GAAGCGCAAACTTACAAAATTGTCTTTGTGTTACCACAACACACACAGTCTTTACCCATCTTTTTCGGTTaGTTTTTCAAACCCTTAATC +
Preference number: 5 (lower is better)
Translates to: EAQTYKIVFVLPQHTQSLPIFFG*FFKPLI
Trigger: GATTAAGGGTTTGAAAAACAAACCGAAAAAGATGGG...TAAAGACTGTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAGTTTGCGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS-3UTR CAA 90 bp TGTCCAGTAAACATAACTGTCACAGTACTGAAGCGCAAACTTACAAAATTGTCTCTTACAAAATTGTCTTaGTGTTACCACAACACACAC +
Preference number: 5 (lower is better)
Translates to: CPVNITVTVLKRKLTKLSLTKLS*CYHNTH
Trigger: GTGTGTGTTGTGGTAACACAAAGACAATTTTGTAAG...AGACAATTTTGTAAGTTTGCGCTTCAGTACTGTGACAGTTATGTTTACTGGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS TCA 90 bp AATCATATTTTTCAGGACTTTAGCTTGCTAAGTAAGGGTGTAGAATaGCAAAATACTCACTCACAGACTCAGAATGTGAGTCTATTCTTC +
Preference number: 5 (lower is better)
Translates to: NHIFQDFSLLSKGVE*QNTHSQTQNVSLFF
Trigger: GAAGAATAGACTCACATTCTGAGTCTGTGAGTGAGTATTTTGTCATTCTACACCCTTACTTAGCAAGCTAAAGTCCTGAAAAATATGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS-3UTR CAA 90 bp ATAAAAGATATTTGCTTCATGCTTTGGGCATCTATCATAGTTGCCCAAAAGACTCCCATCTTTTTCGGTTaGTTTTTCAAACCCTTAATC +
Preference number: 5 (lower is better)
Translates to: IKDICFMLWASIIVAQKTPIFFG*FFKPLI
Trigger: GATTAAGGGTTTGAAAAACAAACCGAAAAAGATGGG...AGTCTTTTGGGCAACTATGATAGATGCCCAAAGCATGAAGCAAATATCTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
CDS GCA 72 bp TCGCTCGCCCGCGTCCGGCTCTCACCTAGTGCCCGTTaGCCCGCGGGCCGGCGCCCGGGACCTCCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SLARVRLSPSAR*PAGRRPGPPSS
Trigger: TGAGGACGGAGGTCCCGGGCGCCGGCCCGCGGGGCAACGGGCACTAGGTGAGAGCCGGACGCGGGCGAGCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393357.6
ENST00000446739.1
ENST00000493212.1
CDS TCA 72 bp GCCCCAGCTTCGGAGGCAGCCGGCCGCCCAGCGCCCTaGGGGCGGCAAATCGATCGCCGGTCAGAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: APASEAAGRPAP*GRQIDRRSEAA
Trigger: GGCGGCCTCTGACCGGCGATCGATTTGCCGCCCTCAGGGCGCTGGGCGGCCGGCTGCCTCCGAAGCTGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000493212.1
CDS CCA 72 bp AGCCTTGCAGTACTTGCTGCAGGCCTGGGGCAGCGGTaGCCATGGGGAGAGATTCCTCTGCTTGAGGAAACG +
Preference number: 6 (lower is better)
Translates to: SLAVLAAGLGQR*PWGEIPLLEET
Trigger: CGTTTCCTCAAGCAGAGGAATCTCTCCCCATGGCCACCGCTGCCCCAGGCCTGCAGCAAGTACTGCAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 72 bp AGCCCTTGGACCTTGAGTGAATATCAGCAACAGCCTTaGAGTACTTGCTGCAGGCCTGGGGCAGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SPWTLSEYQQQP*STCCRPGAAVA
Trigger: GGCCACCGCTGCCCCAGGCCTGCAGCAAGTACTGCAAGGCTGTTGCTGATATTCACTCAAGGTCCAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CCA 72 bp ATATCAGCAACAGCCTTGCAGTACTTGCTGCAGGCCTaGGGCAGCGGTGGCCATGGGGAGAGATTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: ISATALQYLLQA*GSGGHGERFLC
Trigger: GCAGAGGAATCTCTCCCCATGGCCACCGCTGCCCCAGGCCTGCAGCAAGTACTGCAAGGCTGTTGCTGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS TCA 72 bp GAAGGGTATTCACATGGGCCCCCTCACTGTCACTGGTaGCAGATGACCGGCACTCTGGGCCATGTAGCAGGT +
Preference number: 6 (lower is better)
Translates to: EGYSHGPPHCHW*QMTGTLGHVAG
Trigger: ACCTGCTACATGGCCCAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGGGGGCCCATGTGAATACCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS CAA 72 bp TCAACAGTGGTAGCCAGGCAGTACTCACTGTGGGCATaGGGTGAGACTCAGAGCCATGCTGGCCTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: STVVARQYSLWA*GETQSHAGLRR
Trigger: CCTCCTGAGGCCAGCATGGCTCTGAGTCTCACCCAATGCCCACAGTGAGTACTGCCTGGCTACCACTGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 90 bp GTCTCCGAGTCATGGCGGGTGCTTTCTGAGTCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCACTCACACCCGATCTAGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VSESWRVLSESLLDM*RLREPPLTPDLEPW
Trigger: CCAGGGCTCTAGATCGGGTGTGAGTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGACTCAGAAAGCACCCGCCATGACTCGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS GCA 72 bp TTGAGTGAATATCAGCAACAGCCTTGCAGTACTTGCTaGAGGCCTGGGGCAGCGGTGGCCATGGGGAGAGAT +
Preference number: 6 (lower is better)
Translates to: LSEYQQQPCSTC*RPGAAVAMGRD
Trigger: ATCTCTCCCCATGGCCACCGCTGCCCCAGGCCTGCAGCAAGTACTGCAAGGCTGTTGCTGATATTCACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 72 bp CTGGGTGGCCAGGGAGTGCATTTTTGCCACCCTTACTaGAAAGCCAGGCAGTGTTGTTCACAGCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LGGQGVHFCHPY*KARQCCSQPRK
Trigger: CTTCCTGGGCTGTGAACAACACTGCCTGGCTTTGCAGTAAGGGTGGCAAAAATGCACTCCCTGGCCACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CCA 72 bp ACCAAGTGTGCTCTTGAGGTCCCTGATTCTAGGCCTTaGCTCCTGGATGGTATTTCTGGACGCACTCTGGGC +
Preference number: 6 (lower is better)
Translates to: TKCALEVPDSRP*LLDGISGRTLG
Trigger: GCCCAGAGTGCGTCCAGAAATACCATCCAGGAGCCAAGGCCTAGAATCAGGGACCTCAAGAGCACACTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 72 bp TCGGTGAGTCCAGCTGCTGAAGGTTACTCTCCCAGTTaGGGTAGGACGCGAAAACCGCTTCTCTCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SVSPAAEGYSPS*GRTRKPLLSAS
Trigger: AGAGGCTGAGAGAAGCGGTTTTCGCGTCCTACCCAAACTGGGAGAGTAACCTTCAGCAGCTGGACTCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357783.6
ENST00000393357.6
ENST00000446739.1
ENST00000493212.1
CDS TCA 72 bp GGGAAGGATCCAGTCCTGGCAGGAGTCATCACCTGCTaGCCAAAGAGCCCTTGGGCTCTGTATAATCAACAG +
Preference number: 6 (lower is better)
Translates to: GKDPVLAGVITC*PKSPWALYNQQ
Trigger: CTGTTGATTATACAGAGCCCAAGGGCTCTTTGGTCAGCAGGTGATGACTCCTGCCAGGACTGGATCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 72 bp GCGTCTCTGGATCTGCCCAGAGCTAGGGTAACTGGCTaGCCTAAAAGGAAGGACATAAGCCTGGCTGGATTT +
Preference number: 6 (lower is better)
Translates to: ASLDLPRARVTG*PKRKDISLAGF
Trigger: AAATCCAGCCAGGCTTATGTCCTTCCTTTTAGGGCAGCCAGTTACCCTAGCTCTGGGCAGATCCAGAGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 72 bp TTGAGACACCAGCTGGGTGGCCAGGGAGTGCATTTTTaGCACCCTTACTGCAAAGCCAGGCAGTGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: LRHQLGGQGVHF*HPYCKARQCCS
Trigger: TGAACAACACTGCCTGGCTTTGCAGTAAGGGTGGCAAAAATGCACTCCCTGGCCACCCAGCTGGTGTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CCA 72 bp CTCTGTCTTACAGGCAGGGTACAAGCTCAACCACAGTaGGGTAGAACACCAAGTGTGCTCTTGAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: LCLTGRVQAQPQ*GRTPSVLLRSL
Trigger: CAGGGACCTCAAGAGCACACTTGGTGTTCTACCCCACTGTGGTTGAGCTTGTACCCTGCCTGTAAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 72 bp ATTGAGACACCAGCTGGGTGGCCAGGGAGTGCATTTTaGCCACCCTTACTGCAAAGCCAGGCAGTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: IETPAGWPGSAF*PPLLQSQAVLF
Trigger: GAACAACACTGCCTGGCTTTGCAGTAAGGGTGGCAAAAATGCACTCCCTGGCCACCCAGCTGGTGTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 72 bp GACGCGAAAACCGCTTCTCTCAGCCTCTCCATGAGCTaGTCTTTCTCCAGCTGTTTGCCAGGGAAAACACAA +
Preference number: 6 (lower is better)
Translates to: DAKTASLSLSMS*SFSSCLPGKTQ
Trigger: TTGTGTTTTCCCTGGCAAACAGCTGGAGAAAGAGCAGCTCATGGAGAGGCTGAGAGAAGCGGTTTTCGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393357.6
ENST00000446739.1
ENST00000493212.1
CDS CAA 72 bp TCATGGCGGGTGCTTTCTGAGTCTCTTCTTGACATGTaGAGGCTTCGAGAGCCACCACTCACACCCGATCTA +
Preference number: 6 (lower is better)
Translates to: SWRVLSESLLDM*RLREPPLTPDL
Trigger: TAGATCGGGTGTGAGTGGTGGCTCTCGAAGCCTCAACATGTCAAGAAGAGACTCAGAAAGCACCCGCCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS CAA 72 bp TCCACTAGCCCAGTAGACTTAGGTGCACATGACCTATaGAGACACCAGCTGGGTGGCCAGGGAGTGCATTTT +
Preference number: 6 (lower is better)
Translates to: STSPVDLGAHDL*RHQLGGQGVHF
Trigger: AAAATGCACTCCCTGGCCACCCAGCTGGTGTCTCAATAGGTCATGTGCACCTAAGTCTACTGGGCTAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 72 bp CTAGACACACCTTGGACCAAAATGCAACCAGCACATTaGAAGGGAAGGATCCAGTCCTGGCAGGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: LDTPWTKMQPAH*KGRIQSWQESS
Trigger: TGATGACTCCTGCCAGGACTGGATCCTTCCCTTCAAATGTGCTGGTTGCATTTTGGTCCAAGGTGTGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 90 bp AGCCCAGGAAGAGACAGAAGAGTAAAAAGGACTTTGTCTTGCAACTaGGATACCAGCTCAGCCAGAGTAGAACAAGGGACCAGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: SPGRDRRVKRTLSCN*DTSSARVEQGTRVL
Trigger: CAGGACTCTGGTCCCTTGTTCTACTCTGGCTGAGCTGGTATCCAAGTTGCAAGACAAAGTCCTTTTTACTCTTCTGTCTCTTCCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS TCA 72 bp TATCATCTGTGTCCGTGCTTCACCATCTTCTTCACTTaGCAGGTCATCAGACACCCCATTACCCAAACGCCT +
Preference number: 6 (lower is better)
Translates to: YHLCPCFTIFFT*QVIRHPITQTP
Trigger: AGGCGTTTGGGTAATGGGGTGTCTGATGACCTGTCAAGTGAAGAAGATGGTGAAGCACGGACACAGATGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS CAA 90 bp TGTTCACAGCCCAGGAAGAGACAGAAGAGTAAAAAGGACTTTGTCTaGCAACTTGGATACCAGCTCAGCCAGAGTAGAACAAGGGACCAG +
Preference number: 6 (lower is better)
Translates to: CSQPRKRQKSKKDFV*QLGYQLSQSRTRDQ
Trigger: CTGGTCCCTTGTTCTACTCTGGCTGAGCTGGTATCCAAGTTGCAAGACAAAGTCCTTTTTACTCTTCTGTCTCTTCCTGGGCTGTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 90 bp AGTGTTGTTCACAGCCCAGGAAGAGACAGAAGAGTAAAAAGGACTTaGTCTTGCAACTTGGATACCAGCTCAGCCAGAGTAGAACAAGGG +
Preference number: 6 (lower is better)
Translates to: SVVHSPGRDRRVKRT*SCNLDTSSARVEQG
Trigger: CCCTTGTTCTACTCTGGCTGAGCTGGTATCCAAGTTGCAAGACAAAGTCCTTTTTACTCTTCTGTCTCTTCCTGGGCTGTGAACAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 90 bp AGTGACCAAAGACTTAGATCACAATGCCCAATTCCCCTCAAATACTaGGAAAGCCTTCCCAAGAAGGACAGGTACAAAGAAGCCCAGACT +
Preference number: 6 (lower is better)
Translates to: SDQRLRSQCPIPLKY*ESLPKKDRYKEAQT
Trigger: AGTCTGGGCTTCTTTGTACCTGTCCTTCTTGGGAAGGCTTTCCAAGTATTTGAGGGGAATTGGGCATTGTGATCTAAGTCTTTGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS GCA 72 bp GACACAATGCAACTCCTACCTTATATCGTCTGTTATTaGCACTCCACTAGCCCAGTAGACTTAGGTGCACAT +
Preference number: 6 (lower is better)
Translates to: DTMQLLPYIVCY*HSTSPVDLGAH
Trigger: ATGTGCACCTAAGTCTACTGGGCTAGTGGAGTGGCAATAACAGACGATATAAGGTAGGAGTTGCATTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CCA 72 bp CCCCACAAAAGAGAGTCAAGATCTCCTCAGCTGAAATaGACTTTAGTTGGTCAAGGCTCTTCTCACGGAAAA +
Preference number: 6 (lower is better)
Translates to: PHKRESRSPQLK*TLVGQGSSHGK
Trigger: TTTTCCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGATCTTGACTCTCTTTTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS CAA 72 bp AGAGACAGAAGAGTAAAAAGGACTTTGTCTTGCAACTaGGATACCAGCTCAGCCAGAGTAGAACAAGGGACC +
Preference number: 6 (lower is better)
Translates to: RDRRVKRTLSCN*DTSSARVEQGT
Trigger: GGTCCCTTGTTCTACTCTGGCTGAGCTGGTATCCAAGTTGCAAGACAAAGTCCTTTTTACTCTTCTGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CCA 72 bp ATCTCTGGTCGACATTGTCTCCTCTTAATGATAGGATaGACACAACTTGGGTCATTGTCAGTTTCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: ISGRHCLLLMIG*TQLGSLSVSVP
Trigger: AGGGACTGAAACTGACAATGACCCAAGTTGTGTCCATCCTATCATTAAGAGGAGACAATGTCGACCAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000474926.5
CDS CCA 72 bp AGAGTCAAGATCTCCTCAGCTGAAATGGACTTTAGTTaGTCAAGGCTCTTCTCACGGAAAAGTCGATGTAAG +
Preference number: 6 (lower is better)
Translates to: RVKISSAEMDFS*SRLFSRKSRCK
Trigger: CTTACATCGACTTTTCCGTGAGAAGAGCCTTGACCAACTAAAGTCCATTTCAGCTGAGGAGATCTTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357783.6
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000412670.1
ENST00000474926.5
CDS CCA 72 bp GAAACGGGAGAGAAGAATGAGAAGGAGTTTGTCTTTTaGTTTGGGTGTGAGCTCAGCTGCTGTAGAATAGAA +
Preference number: 6 (lower is better)
Translates to: ETGEKNEKEFVF*FGCELSCCRIE
Trigger: TTCTATTCTACAGCAGCTGAGCTCACACCCAAACCAAAAGACAAACTCCTTCTCATTCTTCTCTCCCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 72 bp AGACTTAGATCACAATGCCCAATTCCCCTCAAATACTaGGAAAGCCTTCCCAAGAAGGACAGGTACAAAGAA +
Preference number: 6 (lower is better)
Translates to: RLRSQCPIPLKY*ESLPKKDRYKE
Trigger: TTCTTTGTACCTGTCCTTCTTGGGAAGGCTTTCCAAGTATTTGAGGGGAATTGGGCATTGTGATCTAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS TCA 72 bp AAGTTTTATGTCCTTGGAGAACCTGAGCACAACAAATaGAAGCAATCGAAAGTGTCAGTAGGAAAACCGAGG +
Preference number: 6 (lower is better)
Translates to: KFYVLGEPEHNK*KQSKVSVGKPR
Trigger: CCTCGGTTTTCCTACTGACACTTTCGATTGCTTTCATTTGTTGTGCTCAGGTTCTCCAAGGACATAAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000474926.5
ENST00000481652.1
CDS TCA 72 bp AAAGCAGATGTGAAACTTTTACCTGAGCACAACAAATaGAAGCAATCGAAAGTGTCAGTAGGAAAACCGAGG +
Preference number: 6 (lower is better)
Translates to: KADVKLLPEHNK*KQSKVSVGKPR
Trigger: CCTCGGTTTTCCTACTGACACTTTCGATTGCTTTCATTTGTTGTGCTCAGGTAAAAGTTTCACATCTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357783.6
CDS TCA 72 bp TTTCAGGACTTTAGCTTGCTAAGTAAGGGTGTAGAATaGCAAAATACTCACTCACAGACTCAGAATGTGAGT +
Preference number: 6 (lower is better)
Translates to: FQDFSLLSKGVE*QNTHSQTQNVS
Trigger: ACTCACATTCTGAGTCTGTGAGTGAGTATTTTGTCATTCTACACCCTTACTTAGCAAGCTAAAGTCCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474926.5
CDS CAA 72 bp AGCTCTTTCAACAACTTGGTGGACAGCTTTAATACATaGTTTACTAGAGTAAGCTGTTCTTTCTTATTTGGC +
Preference number: 6 (lower is better)
Translates to: SSFNNLVDSFNT*FTRVSCSFLFG
Trigger: GCCAAATAAGAAAGAACAGCTTACTCTAGTAAACAATGTATTAAAGCTGTCCACCAAGTTGTTGAAAGAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369598.5
ENST00000369600.5
ENST00000369604.6
ENST00000393357.6
ENST00000474926.5