Pregenerated sensors for PHOX2A (Homo sapiens)
Ensembl gene IDs: ENSG00000165462Ensembl transcript IDs: ENST00000298231.5, ENST00000544057.1, ENST00000546310.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTaGGCCCGAGGGGTGGGGCAGCGGGCTTTCCTGATCACCAGCGTA | + |
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Preference number: 1 (lower is better) Translates to: AVVINYPGDHQPLYG*ARGVGQRAFLITSV Trigger: TACGCTGGTGATCAGGAAAGCCCGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR TCA 90 bp | GGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGAGGAGACACGTaGGGGATGAATTGGCGGTGGTCATTAATTATCCCGGCGACCACC | + |
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Preference number: 1 (lower is better) Translates to: GPPSVPDGLGKRGDT*GMNWRWSLIIPATT Trigger: GGTGGTCGCCGGGATAATTAATGACCACCGCCAATTCATCCCTCACGTGTCTCCTCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CCA 90 bp | TGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTaGGTGAGGACGAGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: WRRSRYKELRSAGRG*VRTRVALTWSPKLG Trigger: CCCCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CCA 90 bp | CCGCATCCAAAGAAGGCCAAGCTAGAAGGAGCTCCGGGGTTCTCCTaGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PHPKKAKLEGAPGFS*RRSRYKELRSAGRG Trigger: CCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTTGGCCTTCTTTGGATGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGATCACCAGCGTAAGGGGTGACCCAGCCGCTGCAGAGCCAGGGAAGGGGGGGAGTGGAGACGGATaGGGACTTCCAGGCGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FLITSVRGDPAAAEPGKGGSGDG*GLPGGW Trigger: CCACCCGCCTGGAAGTCCCCATCCGTCTCCACTCCC...CCCCTTCCCTGGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTGATCAGGAA 66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCGGGCAGGGACGTCTCTaGGGGCAGGCTCGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RYKELRSAGRGWVRTRVAGQGRL*GQARSL Trigger: GAGGCTCCGAGCCTGCCCCCAGAGACGTCCCTGCCC...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGGGTGAGAGGGCAGGGACGTCTCTaGGGGCAGGCTCGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RVALTWSPKLGRTHRGVRGQGRL*GQARSL Trigger: GAGGCTCCGAGCCTGCCCCCAGAGACGTCCCTGCCC...TCTCACCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | TTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCGGACTTCCAGGCGGGTaGCCAGGATGGGAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LAVVINYPGDHQPLYGWAGLPGG*PGWEGL Trigger: CAGCCCCTCCCATCCTGGCCACCCGCCTGGAAGTCC...GGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGGCCAAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATGGACTTCCAGGCGGGTaGCCAGGATGGGAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KKAKLEGAPGFSWRRSRYGLPGG*PGWEGL Trigger: CAGCCCCTCCCATCCTGGCCACCCGCCTGGAAGTCC...ATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTTGGCCTTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | GCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACCTTGGTCTCCAAAGTTaGGGAGGACACACCGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: AAAEPGKGAVPILLEDLHLGLQS*GGHTEG Trigger: CCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAG...GTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGATCACCAGCGTAAGGGGTGACCCAGCCGCTGCAGAGCCAGGGAAGGGGTCTGCTGGTAGAGGGTaGGTGAGGACGAGAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: FLITSVRGDPAAAEPGKGSAGRG*VRTRVA Trigger: GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGA...CCCCTTCCCTGGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTGATCAGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CAA 90 bp | ACCCAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTaGAGGACCTTCACTTTGAGGGCACTGTTAGGGACAGGCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: TQPLQSQGRGLCRSS*RTFTLRALLGTGLM Trigger: CATGAGGCCTGTCCCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR TCA 90 bp | ATCACCAGCGTAAGGGGTGACCCAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTGGGGACAGGCCTCATGTaGTACCGCATCCAAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ITSVRGDPAAAEPGKGAVGTGLM*YRIQRR Trigger: CCTTCTTTGGATGCGGTATCACATGAGGCCTGTCCC...CACAGCCCCCTTCCCTGGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCCTGACTGGACACACCGAGGGGTaGGACAGTAGGGAGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KELRSAGRGWVRTRVALTGHTEG*DSREWR Trigger: TCTCCACTCCCTACTGTCTCACCCCTCGGTGTGTCC...AGTCAGGGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCGGACGAGAGTGGCCCTaGCTTGGTCTCCAAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LAVVINYPGDHQPLYGWAGREWP*LGLQSW Trigger: CCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCC...GGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCACTCCTCTAACAGGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGAGCTCCGGGGTTCTCCTaGAGGAGGTCCCGGTATAAA | + |
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Preference number: 2 (lower is better) Translates to: PSTPLTGPPSVPDGLGKRAPGFS*RRSRYK Trigger: TTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGC...TCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACCTGTTAGAGGAGTGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCACTCCTCTAACAGGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGAAGAGTGGCCCTGACTTaGTCTCCAAAGTTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSTPLTGPPSVPDGLGKRRVALT*SPKLGR Trigger: CCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT...TCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACCTGTTAGAGGAGTGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACTTTGAGGGCACTGTTAGGGGACGAGAGTGGCCCTaGCTTGGTCTCCAAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: KGAVPILLEDLHFEGTVRGREWP*LGLQSW Trigger: CCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCC...CCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACTTTGAGGGCACTGTTAGGCTTGGTCTCCAAAGTTaGGGAGGACACACCGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KGAVPILLEDLHFEGTVRLGLQS*GGHTEG Trigger: CCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAG...CCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACTTTGAGGGCACTGTTAGGGCTCCGGGGTTCTCCTaGAGGAGGTCCCGGTATAAA | + |
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Preference number: 2 (lower is better) Translates to: KGAVPILLEDLHFEGTVRAPGFS*RRSRYK Trigger: TTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGC...CCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR TCA 90 bp | AGGGATGAATTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGACACACCGAGGGGTaGGACAGTAGGGAGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: RDELAVVINYPGDHQPLYGHTEG*DSREWR Trigger: TCTCCACTCCCTACTGTCTCACCCCTCGGTGTGTCC...GTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAATTCATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR GCA 72 bp | GTGACCCAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTaGCGATCCTCCTTGAGGACCTTCACTTTGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: VTQPLQSQGRGL*RSSLRTFTLRA Trigger: TGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGCTGGGTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CCA 72 bp | ATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTaGGCCCGAGGGGTGGGGCAGCGGGCTTTCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: INYPGDHQPLYG*ARGVGQRAFLI Trigger: GATCAGGAAAGCCCGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGGCCAAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATACTTGGTCTCCAAAGTaGGGGAGGACACACCGAGGG | + |
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Preference number: 3 (lower is better) Translates to: KKAKLEGAPGFSWRRSRYTWSPK*GRTHRG Trigger: CCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGT...ATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTTGGCCTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CAA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCACTTGGTCTCCAAAGTaGGGGAGGACACACCGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RYKELRSAGRGWVRTRVATWSPK*GRTHRG Trigger: CCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGT...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACTTTGAGGGCACTGTTAGGGAGAGTGGCCCTGACTaGGTCTCCAAAGTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KGAVPILLEDLHFEGTVRESGPD*VSKVGE Trigger: CTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTC...CCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CCA 72 bp | TCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTaGGTGAGGACGAGAGTGGCCCTGACTTGGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SRYKELRSAGRG*VRTRVALTWSP Trigger: TGGAGACCAAGTCAGGGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR-3UTR CAA 90 bp | TTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCTTGAGGACCTTCACTTaGAGGGCACTGTTAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: LAVVINYPGDHQPLYGWALRTFT*RALLGT Trigger: TGTCCCTAACAGTGCCCTCAAAGTGAAGGTCCTCAA...GGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CCA 72 bp | AAGAAGGCCAAGCTAGAAGGAGCTCCGGGGTTCTCCTaGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: KKAKLEGAPGFS*RRSRYKELRSA Trigger: AGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTTGGCCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGAGCCGCCGGGCTGGCTaGAGGCGCCAAAGTCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSRRPPASVRVGPRGGAASRRAG*RRQSRR Trigger: ACGGCGACTTTGGCGCCTGCAGCCAGCCCGGCGGCT...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGAGGCGGACGCCTCCATaGCCGCCACGCACGAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LSRRPPASVRVGPRGGAARRTPP*PPRTSR Trigger: ACGACTCGTGCGTGGCGGCCATGGAGGCGTCCGCCT...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGGGACTTCCAGGCGGGTaGCCAGGATGGGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSRRPPASVRVGPRGGAAGLPGG*PGWEGL Trigger: CAGCCCCTCCCATCCTGGCCACCCGCCTGGAAGTCC...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | GAGGACGAGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGACCCGAGGCCAGCTCTaGGCGCCCGAGAGTCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: EDESGPDLVSKVGEDTPRTRGQL*APESPP Trigger: GGGCGGACTCTCGGGCGCTCAGAGCTGGCCTCGGGT...CCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | CAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCGGGAGTGGAGACGGATaGGGACTTCCAGGCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPLQSQGRGLCRSSLRTFGSGDG*GLPGGW Trigger: CCACCCGCCTGGAAGTCCCCATCCGTCTCCACTCCC...GAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGCTTGGTCTCCAAAGTTaGGGAGGACACACCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSRRPPASVRVGPRGGAALGLQS*GGHTEG Trigger: CCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAG...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | AAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCCTGACTCCGCGCCCTTGGCGCTaGCCGCGCGCTCCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: KELRSAGRGWVRTRVALTPRPWR*PRAPVC Trigger: GCAAACAGGAGCGCGCGGCCAGCGCCAAGGGCGCGG...AGTCAGGGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCACTCCTCTAACAGGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGAGGGCAGGGACGTCTCTaGGGGCAGGCTCGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSTPLTGPPSVPDGLGKRGQGRL*GQARSL Trigger: GAGGCTCCGAGCCTGCCCCCAGAGACGTCCCTGCCC...TCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACCTGTTAGAGGAGTGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | AAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCCCACAGTGCGCCCTTaGGCGGCTGTGGCCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KLEGAPGFSWRRSRYKELPTVRP*AAVAPA Trigger: GGCCGGGGCCACAGCCGCTCAAGGGCGCACTGTGGG...GAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR GCA 90 bp | CCCTCCACTCCTCTAACAGGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGACCGCGCGCTCCTGTTTaGGGAACTTGGCCCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PSTPLTGPPSVPDGLGKRPRAPV*GTWPGG Trigger: ACCGCCGGGCCAAGTTCCGCAAACAGGAGCGCGCGG...TCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACCTGTTAGAGGAGTGGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | TTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGCAGGGGGCTGTATTaGAAGCCGCCGGGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LAVVINYPGDHQPLYGWARRGLY*KPPGWL Trigger: CAGCCAGCCCGGCGGCTTCCAATACAGCCCCCTGCG...GGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGGGTGAGACGCCAAGTGCGCAGTTaGAGGAGCCGAGCGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RVALTWSPKLGRTHRGVRRQVRS*RSRARG Trigger: GCCCCGCGCTCGGCTCCTCCAACTGCGCACTTGGCG...TCTCACCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | CAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCTCTGCTGGTAGAGGGTaGGTGAGGACGAGAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QPLQSQGRGLCRSSLRTFSAGRG*VRTRVA Trigger: GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGA...GAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGACGAGTCGTACGAATTaGGGTAGGAGTAGTCCATCG | + |
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Preference number: 4 (lower is better) Translates to: LSRRPPASVRVGPRGGAATSRTN*GRSSPS Trigger: CGATGGACTACTCCTACCTCAATTCGTACGACTCGT...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR TCA 90 bp | AAGAAGGCCAAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATGGGCCGGGCTTCCGGTaGAAGGAGGACAGAACCCCG | + |
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Preference number: 4 (lower is better) Translates to: KKAKLEGAPGFSWRRSRYGPGFR*KEDRTP Trigger: CGGGGTTCTGTCCTCCTTTCACCGGAAGCCCGGCCC...ATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTTGGCCTTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | GCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACGGACGAGAGTGGCCCTaGCTTGGTCTCCAAAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: AAAEPGKGAVPILLEDLHGREWP*LGLQSW Trigger: CCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCC...GTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCCACCAGCGTAAGGGGTaGCCCAGCCGCTGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RYKELRSAGRGWVRTRVAHQRKG*PSRCRA Trigger: GGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTG...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | CGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGCACCAGCGTAAGGGGTaGCCCAGCCGCTGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSPGGGPGIKNSALLVEHQRKG*PSRCRA Trigger: GGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTG...CTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCCACACCGGCCCACAGTaGGCCCTTGAGCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYKELRSAGRGWVRTRVAHTGPQ*ALERLW Trigger: CCACAGCCGCTCAAGGGCGCACTGTGGGCCGGTGTG...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | CGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGTGGAAGCCGCCGGGCTaGCTGCAGGCGCCAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGSPGGGPGIKNSALLVEWKPPG*LQAPKS Trigger: CGACTTTGGCGCCTGCAGCCAGCCCGGCGGCTTCCA...CTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | TTCCTGATCACCAGCGTAAGGGGTGACCCAGCCGCTGCAGAGCCAGGGAAGGGGGCGTGGGGCTGCACGTaGACTCCTTGGAATCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLITSVRGDPAAAEPGKGAWGCT*TPWNRR Trigger: ACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGC...CCCCTTCCCTGGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTGATCAGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCACTCCTCTAACAGGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGACGGTGCTATCGGGCGTaGGGCTGCACGTGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTPLTGPPSVPDGLGKRRCYRA*GCTWTP Trigger: AGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCG...TCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACCTGTTAGAGGAGTGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR TCA 90 bp | AAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACTTTGAGGGCACTGTTAGGGGGCCGGGCTTCCGGTaGAAGGAGGACAGAACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGAVPILLEDLHFEGTVRGPGFR*KEDRTP Trigger: CGGGGTTCTGTCCTCCTTTCACCGGAAGCCCGGCCC...CCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | CAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCGGGACAGGCCTCATGTaGTACCGCATCCAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLQSQGRGLCRSSLRTFGTGLM*YRIQRR Trigger: CCTTCTTTGGATGCGGTATCACATGAGGCCTGTCCC...GAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | GAGGACGAGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGTGCTTGCGCTTCTCGTaGAGGCCGGATGGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDESGPDLVSKVGEDTPRCLRFS*RPDGSG Trigger: CCCAGAGCCATCCGGCCTGCACGAGAAGCGCAAGCA...CCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | AAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCGGGCAGGGACGTCTCTaGGGGCAGGCTCGGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLEGAPGFSWRRSRYKELGQGRL*GQARSL Trigger: GAGGCTCCGAGCCTGCCCCCAGAGACGTCCCTGCCC...GAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | CGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGGAGTGGAGACGGATaGGGACTTCCAGGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSPGGGPGIKNSALLVEGSGDG*GLPGGW Trigger: CCACCCGCCTGGAAGTCCCCATCCGTCTCCACTCCC...CTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | CGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGCAGGGAAGGGGGCTGTaGCGATCCTCCTTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RGSPGGGPGIKNSALLVEQGRGL*RSSLRT Trigger: GGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTG...CTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | AAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCCTGACTCAGGGAAGGGGGCTGTaGCGATCCTCCTTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KELRSAGRGWVRTRVALTQGRGL*RSSLRT Trigger: GGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTG...AGTCAGGGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | AAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCGGACTTCCAGGCGGGTaGCCAGGATGGGAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLEGAPGFSWRRSRYKELGLPGG*PGWEGL Trigger: CAGCCCCTCCCATCCTGGCCACCCGCCTGGAAGTCC...GAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | AAGAAGGCCAAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATGGACACACCGAGGGGTaGGACAGTAGGGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKAKLEGAPGFSWRRSRYGHTEG*DSREWR Trigger: TCTCCACTCCCTACTGTCTCACCCCTCGGTGTGTCC...ATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTTGGCCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | CCCTCCACTCCTCTAACAGGTCCACCCTCTGTGCCAGACGGGCTAGGGAAGAGAGGACGAGAGTGGCCCTaGCTTGGTCTCCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTPLTGPPSVPDGLGKRGREWP*LGLQSW Trigger: CCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCC...TCTCTTCCCTAGCCCGTCTGGCACAGAGGGTGGACCTGTTAGAGGAGTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | GGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGCCGGACTCCGCCGGCTaGCAAGCCTTAAGTAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRRSRYKELRSAGRGPDSAG*QALSSS Trigger: CGAACTACTTAAGGCTTGGCAGCCGGCGGAGTCCGG...CCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCGCAGCTAGAAGAGATTaGTCTTCAGGGCGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RYKELRSAGRGWVRTRVAAARRD*SSGRGR Trigger: CCGGCCCCGCCCTGAAGACCAATCTCTTCTAGCTGC...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
||
| CDS-3UTR CCA 90 bp | CGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGTCTGCTGGTAGAGGGTaGGTGAGGACGAGAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSPGGGPGIKNSALLVESAGRG*VRTRVA Trigger: GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGA...CTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| 3UTR CAA 72 bp | CTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTaGAGGACCTTCACTTTGAGGGCACTGTTAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQGRGLCRSS*RTFTLRALLGT Trigger: TGTCCCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR GCA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCTTCTGGAACCAGACCTaGACGCGAGCCTCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYKELRSAGRGWVRTRVAFWNQT*TRASVR Trigger: CCTCACTGAGGCTCGCGTGCAGGTCTGGTTCCAGAA...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR GCA 90 bp | GGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTATCGGGCGTGGGGCTaGACGTGGACTCCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRRSRYKELRSAGRGYRAWG*TWTPWN Trigger: ATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATA...CCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGGGTGAGACAGGCCGGATGGCTCTaGGAAGAACTTGTAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVALTWSPKLGRTHRGVRQAGWL*EELVGH Trigger: GTGCCCTACAAGTTCTTCCCAGAGCCATCCGGCCTG...TCTCACCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | GGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGCACGTGGACTCCTTaGAATCGTCGTCCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRRSRYKELRSAGRGCTWTP*NRRPRR Trigger: CCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCA...CCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS-3UTR CCA 90 bp | AAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCCTGACTCTTGGTCTCCAAAGTTaGGGAGGACACACCGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KELRSAGRGWVRTRVALTLGLQS*GGHTEG Trigger: CCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAG...AGTCAGGGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | GGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGGCTCCGGGGTTCTCCTaGAGGAGGTCCCGGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRRSRYKELRSAGRGAPGFS*RRSRYK Trigger: TTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGC...CCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR TCA 90 bp | CGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGGACAGGCCTCATGTaGTACCGCATCCAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSPGGGPGIKNSALLVEGTGLM*YRIQRR Trigger: CCTTCTTTGGATGCGGTATCACATGAGGCCTGTCCC...CTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | GGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGAGAGTGGCCCTGACTTaGTCTCCAAAGTTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRRSRYKELRSAGRGRVALT*SPKLGR Trigger: CCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT...CCCTCTACCAGCAGAGCGGAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCAGAGTGGCCCTGACTTaGTCTCCAAAGTTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYKELRSAGRGWVRTRVARVALT*SPKLGR Trigger: CCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | AGGGATGAATTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGCAGCTAGAAGAGATTaGTCTTCAGGGCGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RDELAVVINYPGDHQPLYAARRD*SSGRGR Trigger: CCGGCCCCGCCCTGAAGACCAATCTCTTCTAGCTGC...GTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAATTCATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | TTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCGGGATGAATTGGCGGTaGTCATTAATTATCCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAVVINYPGDHQPLYGWAGMNWR*SLIIPA Trigger: CGCCGGGATAATTAATGACCACCGCCAATTCATCCC...GGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | GAGGACGAGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGGGGATGAATTGGCGGTaGTCATTAATTATCCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDESGPDLVSKVGEDTPRGMNWR*SLIIPA Trigger: CGCCGGGATAATTAATGACCACCGCCAATTCATCCC...CCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CCA 90 bp | AGGGATGAATTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGCTCCGGGGTTCTCCTaGAGGAGGTCCCGGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDELAVVINYPGDHQPLYAPGFS*RRSRYK Trigger: TTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGC...GTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAATTCATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS CCA 90 bp | CCTTGGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCGCCCTTTTTaGCGCCCGCCGCGCCCGCCGCGCCCTTGGCGCTGGCCGCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWNRRPRRSSAPRPF*RPPRPPRPWRWPRA Trigger: AGCGCGCGGCCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS TCA 90 bp | GAAGGGAGGTTCGAGCGCCAGGCTCCGAGGACCCGAGGCCAGCTCTaGGCGCCCGAGAGTCCGCCCGCCCCGTCGCGGCCGCACTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRFERQAPRTRGQL*APESPPAPSRPHSA Trigger: GGCTGAGTGCGGCCGCGACGGGGCGGGCGGACTCTCGGGCGCTCAGAGCTGGCCTCGGGTCCTCGGAGCCTGGCGCTCGAACCTCCCTTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS GCA 90 bp | GCGGGCTGGCCAGGCCGGGCGCAGGCGGCGGCGGCAGCGAGGCGGTaGTATCGGGCGTGGGGCTGCACGTGGACTCCTTGGAATCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGWPGRAQAAAAARR*YRAWGCTWTPWNRR Trigger: ACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGCCGCCGCCGCCTGCGCCCGGCCTGGCCAGCCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS GCA 90 bp | GAGGACAGAACCCCGGAGAAGGGCCCGGGGCCGGACTCCGCCGGCTaGCAAGCCTTAAGTAGTTCGGCCGCTCCCGCGCCAGGCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EDRTPEKGPGPDSAG*QALSSSAAPAPGPP Trigger: CGGCGGGCCTGGCGCGGGAGCGGCCGAACTACTTAAGGCTTGGCAGCCGGCGGAGTCCGGCCCCGGGCCCTTCTCCGGGGTTCTGTCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGGCCCACAGTGCGCCCTaGAGCGGCTGTGGCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRRPPASVRVGPRGGAAAHSAP*SGCGPG Trigger: GCCGGGGCCACAGCCGCTCAAGGGCGCACTGTGGGC...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298231.5 |
||
| CDS GCA 90 bp | GCGCAGGCGGCGGCGGCAGCGAGGCGGTGCTATCGGGCGTGGGGCTaGACGTGGACTCCTTGGAATCGTCGTCCTCGGAGGAGCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AQAAAAARRCYRAWG*TWTPWNRRPRRSSA Trigger: CGCGCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGCCGCCGCCGCCTGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
||
| CDS CCA 90 bp | GCGGCGGCGGCAGCGAGGCGGTGCTATCGGGCGTGGGGCTGCACGTaGACTCCTTGGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAARRCYRAWGCT*TPWNRRPRRSSAPR Trigger: GCGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGCCGCCGCCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
||
| CDS GCA 90 bp | GGAAAGCGGGCCGCAGGGGGCTGTATTGGAAGCCGCCGGGCTGGCTaGAGGCGCCAAAGTCGCCGTAGGCGGACGCCTCCATGGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKRAAGGCIGSRRAG*RRQSRRRRTPPWPP Trigger: TGGCGGCCATGGAGGCGTCCGCCTACGGCGACTTTGGCGCCTGCAGCCAGCCCGGCGGCTTCCAATACAGCCCCCTGCGGCCCGCTTTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298231.5 |
||
| CDS-3UTR CAA 90 bp | GCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACGCCGCGCGCTCCTGTTaGCGGAACTTGGCCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAEPGKGAVPILLEDLHAARSC*RNLARR Trigger: CCGCCGGGCCAAGTTCCGCAAACAGGAGCGCGCGGC...GTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298231.5 |
||
| CDS CCA 90 bp | GCAGCGAGGCGGTGCTATCGGGCGTGGGGCTGCACGTGGACTCCTTaGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCGCCCTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AARRCYRAWGCTWTP*NRRPRRSSAPRPFW Trigger: CCAAAAAGGGCGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
||
| CDS CCA 90 bp | TGGGGGCAGGCTCGGAGCCTCCAGAGGCCGGCAGCTAGAAGAGATTaGTCTTCAGGGCGGGGCCGGGCTTCCGGTGAAAGGAGGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WGQARSLQRPAARRD*SSGRGRASGERRTE Trigger: TTCTGTCCTCCTTTCACCGGAAGCCCGGCCCCGCCCTGAAGACCAATCTCTTCTAGCTGCCGGCCTCTGGAGGCTCCGAGCCTGCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
||
| CDS-3UTR CAA 90 bp | GAGGACGAGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGCCGCAGGGGGCTGTATaGGAAGCCGCCGGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EDESGPDLVSKVGEDTPRPQGAV*EAAGLA Trigger: AGCCAGCCCGGCGGCTTCCAATACAGCCCCCTGCGG...CCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298231.5 |
||
| CDS-3UTR CAA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGCTGTGCCGATCCTCCTaGAGGACCTTCACTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSRRPPASVRVGPRGGAALCRSS*RTFTLR Trigger: CCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAG...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | TTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCGAGGGGTGGGGCAGCGTTGAGGACCTTCACTTaGAGGGCACTGTTAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: LSRRPPASVRVGPRGGAALRTFT*RALLGT Trigger: TGTCCCTAACAGTGCCCTCAAAGTGAAGGTCCTCAA...CGCTGCCCCACCCCTCGGGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | TTCCTGATCACCAGCGTAAGGGGTGACCCAGCCGCTGCAGAGCCAGGGAAGGGGACTTGGTCTCCAAAGTaGGGGAGGACACACCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: FLITSVRGDPAAAEPGKGTWSPK*GRTHRG Trigger: CCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGT...CCCCTTCCCTGGCTCTGCAGCGGCTGGGTCACCCCTTACGCTGGTGATCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | GAGGACGAGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGCTGCACGTGGACTCCTaGGAATCGTCGTCCTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: EDESGPDLVSKVGEDTPRLHVDS*ESSSSE Trigger: CTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAG...CCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTCGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS CCA 90 bp | GGGCACAAGAGAAGGGAACAGATAACTTTTCCGTCGCTCCTGAGCTaGGTTGGGCAGCTCGTCCACTCAACCCCCAGCCTCTTCCACCGA | + |
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Preference number: 5 (lower is better) Translates to: GHKRREQITFPSLLS*VGQLVHSTPSLFHR Trigger: TCGGTGGAAGAGGCTGGGGGTTGAGTGGACGAGCTGCCCAACCCAGCTCAGGAGCGACGGAAAAGTTATCTGTTCCCTTCTCTTGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544057.1 |
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| CDS-3UTR CAA 90 bp | CGGTATAAAGAACTCCGCTCTGCTGGTAGAGGGTGGGTGAGGACGAGAGTGGCCGAGAGTGGCCCTGACTaGGTCTCCAAAGTTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RYKELRSAGRGWVRTRVAESGPD*VSKVGE Trigger: CTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTC...GGCCACTCTCGTCCTCACCCACCCTCTACCAGCAGAGCGGAGTTCTTTATACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | TTGGCGGTGGTCATTAATTATCCCGGCGACCACCAGCCTCTGTACGGGTGGGCCCTGTGCCGATCCTCCTaGAGGACCTTCACTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LAVVINYPGDHQPLYGWALCRSS*RTFTLR Trigger: CCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAG...GGCCCACCCGTACAGAGGCTGGTGGTCGCCGGGATAATTAATGACCACCGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | CAGCCGCTGCAGAGCCAGGGAAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCCACGTGAGGGATGAATaGGCGGTGGTCATTAATTAT | + |
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Preference number: 5 (lower is better) Translates to: QPLQSQGRGLCRSSLRTFHVRDE*AVVINY Trigger: ATAATTAATGACCACCGCCAATTCATCCCTCACGTG...GAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTTCCCTGGCTCTGCAGCGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | AAGCTAGAAGGAGCTCCGGGGTTCTCCTGGAGGAGGTCCCGGTATAAAGAACTCGAGAGTGGCCCTGACTaGGTCTCCAAAGTTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KLEGAPGFSWRRSRYKELESGPD*VSKVGE Trigger: CTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCTC...GAGTTCTTTATACCGGGACCTCCTCCAGGAGAACCCCGGAGCTCCTTCTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | AAGGGGGCTGTGCCGATCCTCCTTGAGGACCTTCACTTTGAGGGCACTGTTAGGTTGAGGACCTTCACTTaGAGGGCACTGTTAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: KGAVPILLEDLHFEGTVRLRTFT*RALLGT Trigger: TGTCCCTAACAGTGCCCTCAAAGTGAAGGTCCTCAA...CCTAACAGTGCCCTCAAAGTGAAGGTCCTCAAGGAGGATCGGCACAGCCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS-3UTR CAA 90 bp | AGAGTGGCCCTGACTTGGTCTCCAAAGTTGGGGAGGACACACCGAGGGGTGAGACACGTGAGGGATGAATaGGCGGTGGTCATTAATTAT | + |
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Preference number: 5 (lower is better) Translates to: RVALTWSPKLGRTHRGVRHVRDE*AVVINY Trigger: ATAATTAATGACCACCGCCAATTCATCCCTCACGTG...TCTCACCCCTCGGTGTGTCCTCCCCAACTTTGGAGACCAAGTCAGGGCCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS CAA 90 bp | CAGCGCGCCTCGCCCTTTTTGGCGCCCGCCGCGCCCGCCGCGCCCTaGGCGCTGGCCGCGCGCTCCTGTTTGCGGAACTTGGCCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QRASPFLAPAAPAAP*ALAARSCLRNLARR Trigger: CCGCCGGGCCAAGTTCCGCAAACAGGAGCGCGCGGCCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCGAGGCGCGCTG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CCA 72 bp | CGTCGTCCTCGGAGGAGCAGCGCGCCTCGCCCTTTTTaGCGCCCGCCGCGCCCGCCGCGCCCTTGGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RRPRRSSAPRPF*RPPRPPRPWRW Trigger: CCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCGAGGCGCGCTGCTCCTCCGAGGACGACG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CCA 72 bp | TTTTGGCGCCCGCCGCGCCCGCCGCGCCCTTGGCGCTaGCCGCGCGCTCCTGTTTGCGGAACTTGGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: FWRPPRPPRPWR*PRAPVCGTWPG Trigger: GCCGGGCCAAGTTCCGCAAACAGGAGCGCGCGGCCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 72 bp | TCGTCGTCCTCGGAGGAGCAGCGCGCCTCGCCCTTTTaGGCGCCCGCCGCGCCCGCCGCGCCCTTGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSEEQRASPF*APAAPAAPLAL Trigger: CAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCGAGGCGCGCTGCTCCTCCGAGGACGACGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 90 bp | TCCTTGGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCGCCCTTTTaGGCGCCCGCCGCGCCCGCCGCGCCCTTGGCGCTGGCCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SLESSSSEEQRASPF*APAAPAAPLALAAR Trigger: GCGCGCGGCCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 90 bp | GCAGGGCGGCCCTGCCGCGGGGAAAGCGGGCCGCAGGGGGCTGTATaGGAAGCCGCCGGGCTGGCTGCAGGCGCCAAAGTCGCCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGRPCRGESGPQGAV*EAAGLAAGAKVAVG Trigger: GCCTACGGCGACTTTGGCGCCTGCAGCCAGCCCGGCGGCTTCCAATACAGCCCCCTGCGGCCCGCTTTCCCCGCGGCAGGGCCGCCCTGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS CCA 72 bp | CGCCCTTTTTGGCGCCCGCCGCGCCCGCCGCGCCCTTaGCGCTGGCCGCGCGCTCCTGTTTGCGGAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: RPFWRPPRPPRP*RWPRAPVCGTW Trigger: CCAAGTTCCGCAAACAGGAGCGCGCGGCCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 72 bp | TCGCCCTTTTTGGCGCCCGCCGCGCCCGCCGCGCCCTaGGCGCTGGCCGCGCGCTCCTGTTTGCGGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SPFLAPAAPAAP*ALAARSCLRNL Trigger: CAAGTTCCGCAAACAGGAGCGCGCGGCCAGCGCCAAGGGCGCGGCGGGCGCGGCGGGCGCCAAAAAGGGCGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 72 bp | CCCTGCCGCGGGGAAAGCGGGCCGCAGGGGGCTGTATaGGAAGCCGCCGGGCTGGCTGCAGGCGCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PCRGESGPQGAV*EAAGLAAGAKV Trigger: GACTTTGGCGCCTGCAGCCAGCCCGGCGGCTTCCAATACAGCCCCCTGCGGCCCGCTTTCCCCGCGGCAGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS GCA 72 bp | GCCGCAGGGGGCTGTATTGGAAGCCGCCGGGCTGGCTaGAGGCGCCAAAGTCGCCGTAGGCGGACGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AAGGCIGSRRAG*RRQSRRRRTPP Trigger: TGGAGGCGTCCGCCTACGGCGACTTTGGCGCCTGCAGCCAGCCCGGCGGCTTCCAATACAGCCCCCTGCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298231.5 |
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| CDS GCA 72 bp | GCGGCGGCAGCGAGGCGGTGCTATCGGGCGTGGGGCTaGACGTGGACTCCTTGGAATCGTCGTCCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AAAARRCYRAWG*TWTPWNRRPRR Trigger: CCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGCCGCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CCA 72 bp | CAGGCGGCGGCGGCAGCGAGGCGGTGCTATCGGGCGTaGGGCTGCACGTGGACTCCTTGGAATCGTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QAAAAARRCYRA*GCTWTPWNRRP Trigger: AGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGCCGCCGCCGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CCA 72 bp | CGGTGCTATCGGGCGTGGGGCTGCACGTGGACTCCTTaGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RCYRAWGCTWTP*NRRPRRSSAPR Trigger: GCGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 72 bp | GCGGTGCTATCGGGCGTGGGGCTGCACGTGGACTCCTaGGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: AVLSGVGLHVDS*ESSSSEEQRAS Trigger: CGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CAA 90 bp | GGCAGCGAGGCGGTGCTATCGGGCGTGGGGCTGCACGTGGACTCCTaGGAATCGTCGTCCTCGGAGGAGCAGCGCGCCTCGCCCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GSEAVLSGVGLHVDS*ESSSSEEQRASPFL Trigger: CAAAAAGGGCGAGGCGCGCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS CCA 72 bp | GCAGCGAGGCGGTGCTATCGGGCGTGGGGCTGCACGTaGACTCCTTGGAATCGTCGTCCTCGGAGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AARRCYRAWGCT*TPWNRRPRRSS Trigger: GCTGCTCCTCCGAGGACGACGATTCCAAGGAGTCCACGTGCAGCCCCACGCCCGATAGCACCGCCTCGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000544057.1 |
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| CDS TCA 72 bp | AAGAGATTGGTCTTCAGGGCGGGGCCGGGCTTCCGGTaGAAGGAGGACAGAACCCCGGAGAAGGGCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: KRLVFRAGPGFR*KEDRTPEKGPG Trigger: CCCCGGGCCCTTCTCCGGGGTTCTGTCCTCCTTTCACCGGAAGCCCGGCCCCGCCCTGAAGACCAATCTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS CCA 72 bp | GCTCGGAGCCTCCAGAGGCCGGCAGCTAGAAGAGATTaGTCTTCAGGGCGGGGCCGGGCTTCCGGTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ARSLQRPAARRD*SSGRGRASGER Trigger: CCTTTCACCGGAAGCCCGGCCCCGCCCTGAAGACCAATCTCTTCTAGCTGCCGGCCTCTGGAGGCTCCGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298231.5 ENST00000546310.1 |
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| CDS CCA 72 bp | GGAACAGATAACTTTTCCGTCGCTCCTGAGCTGGGTTaGGCAGCTCGTCCACTCAACCCCCAGCCTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GTDNFSVAPELG*AARPLNPQPLP Trigger: TGGAAGAGGCTGGGGGTTGAGTGGACGAGCTGCCCAACCCAGCTCAGGAGCGACGGAAAAGTTATCTGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544057.1 |
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| CDS CCA 72 bp | AGAAGGGAACAGATAACTTTTCCGTCGCTCCTGAGCTaGGTTGGGCAGCTCGTCCACTCAACCCCCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RREQITFPSLLS*VGQLVHSTPSL Trigger: GAGGCTGGGGGTTGAGTGGACGAGCTGCCCAACCCAGCTCAGGAGCGACGGAAAAGTTATCTGTTCCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000544057.1 |
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