Pregenerated sensors for PHOSPHO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173868Ensembl transcript IDs: ENST00000310544.9, ENST00000413580.5, ENST00000503902.1, ENST00000511066.5, ENST00000512250.1, ENST00000514112.1, ENST00000574638.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCGGCAGCAGAGGTCTGTCCCGGCTGAGTTTGGAGTGTAAGAAGTaGGGAAGGGGGCTAGCTGAGGTATTGGGGCGCAGGATGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GGSRGLSRLSLECKK*GRGLAEVLGRRMEQ Trigger: TTGCTCCATCCTGCGCCCCAATACCTCAGCTAGCCCCCTTCCCCACTTCTTACACTCCAAACTCAGCCGGGACAGACCTCTGCTGCCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000310544.9 ENST00000413580.5 ENST00000503902.1 ENST00000512250.1 |
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| CDS CCA 90 bp | CTGGCACATCCAACACCAATTCCCCAGGAGGAACGTGTCAGCAGGTaGGGTTTCTGCCAGAGTCCGAAGCAAGCGGGCAGCAGGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LAHPTPIPQEERVSR*GFCQSPKQAGSRRS Trigger: GCTTCTCCTGCTGCCCGCTTGCTTCGGACTCTGGCAGAAACCCCACCTGCTGACACGTTCCTCCTGGGGAATTGGTGTTGGATGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503902.1 |
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| CDS TCA 72 bp | CCAGCAGTCCCCGCGCATCCGGCCCCGACGGGTTGCTaGGGATGCGGCGGAACAGGCTGTGGTGGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PAVPAHPAPTGC*GCGGTGCGGRR Trigger: CCGCCGGCCACCACAGCCTGTTCCGCCGCATCCTCAGCAACCCGTCGGGGCCGGATGCGCGGGGACTGCTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000310544.9 ENST00000413580.5 ENST00000511066.5 ENST00000514112.1 |
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| CDS GCA 72 bp | ATTCCCCAGGAGGAACGTGTCAGCAGGTGGGGTTTCTaGCAGAGTCCGAAGCAAGCGGGCAGCAGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: IPQEERVSRWGF*QSPKQAGSRRS Trigger: GCTTCTCCTGCTGCCCGCTTGCTTCGGACTCTGGCAGAAACCCCACCTGCTGACACGTTCCTCCTGGGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503902.1 |
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| CDS CCA 72 bp | CCAACACCAATTCCCCAGGAGGAACGTGTCAGCAGGTaGGGTTTCTGCCAGAGTCCGAAGCAAGCGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PTPIPQEERVSR*GFCQSPKQAGS Trigger: GCTGCCCGCTTGCTTCGGACTCTGGCAGAAACCCCACCTGCTGACACGTTCCTCCTGGGGAATTGGTGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503902.1 |
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| CDS CAA 72 bp | CCTCCAGCCGTCGTCACACTGTTTGGTGAGTTGCCCTaGTTTCTTTCAGTCTCCAAGGCAGAAAGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PPAVVTLFGELP*FLSVSKAESQA Trigger: TGCCTGACTTTCTGCCTTGGAGACTGAAAGAAACAAGGGCAACTCACCAAACAGTGTGACGACGGCTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574638.1 |
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