RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHLPP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000040199

Ensembl transcript IDs: ENST00000393524.6, ENST00000538126.5, ENST00000564884.5, ENST00000567016.1, ENST00000568004.5, ENST00000568954.5, ENST00000574977.1

Found 1024 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGGACTGCCAGCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTaGTTGTCTTCTCGTGATCATGTACGGCGCCAGCGTGGTGCTGGC +
Preference number: 1 (lower is better)
Translates to: DGLPAGRHRRSSSHL*LSSRDHVRRQRGAG
Trigger: GCCAGCACCACGCTGGCGCCGTACATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR TCA 90 bp AGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGCCCCTaGTATACGGTGGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCA +
Preference number: 1 (lower is better)
Translates to: RFGSWTSSTRSSARP*YTVAWLFLWVWGSS
Trigger: TGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATATCAGGGGCGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp AGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATGGACTGCCAGCTaGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTTGTCTTCTCG +
Preference number: 1 (lower is better)
Translates to: RGSMPARVSPGWTAS*QAPTEQQPPLLVFS
Trigger: CGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp GCTGGACCAGCAGTACACGATCCTCCGCTCGCCCCTGATATACGGTaGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGT +
Preference number: 1 (lower is better)
Translates to: AGPAVHDPPLAPDIR*RGCFSGSGGPHHGC
Trigger: ACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATATCAGGGGCGAGCGGAGGATCGTGTACTGCTGGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 90 bp ACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATGGACTaGCAGCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTTGT +
Preference number: 1 (lower is better)
Translates to: TRERLYARKGLTWMD*QLAGTDGAAATFAC
Trigger: ACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp GCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATaGACTGCCAGCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTG +
Preference number: 1 (lower is better)
Translates to: AKQERGSMPARVSPG*TASWQAPTEQQPPL
Trigger: CAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp ACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTaGATGGACTGCCAGCTGGCAGGCACCGACGGAGCAGCAGCCACC +
Preference number: 1 (lower is better)
Translates to: TCKTRERLYARKGLT*MDCQLAGTDGAAAT
Trigger: GGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 90 bp CTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTaGACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAAT +
Preference number: 1 (lower is better)
Translates to: LLTEAAFSLLAAVGY*TGIGVYLHVALQIN
Trigger: ATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp GTTTTACTCCAAGGAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTaGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGC +
Preference number: 1 (lower is better)
Translates to: VLLQGAKSRTMLSGK*LLTEAAFSLLAAVG
Trigger: GCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTCCTTGGAGTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 90 bp GGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTaGAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGG +
Preference number: 1 (lower is better)
Translates to: GVYLHVALQINSTDT*KTRERLYARKGLTW
Trigger: CCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR TCA 90 bp TGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTaGACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGACACC +
Preference number: 1 (lower is better)
Translates to: WSCSRFICISLHAHP*TPREWQETLSQKDT
Trigger: GGTGTCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp TATACGGTGGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATaGGTGTTTTACTCCAAGGAGCCAAGAGTCGAACAATGTTGTCAG +
Preference number: 1 (lower is better)
Translates to: YTVAWLFLWVWGSSP*VFYSKEPRVEQCCQ
Trigger: CTGACAACATTGTTCGACTCTTGGCTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 90 bp CAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTaGAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCTCT +
Preference number: 1 (lower is better)
Translates to: QWATAQALVFTSTWL*RSIAPTLAKQERGS
Trigger: AGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR TCA 90 bp ACAGAAGCGCTACAAAGGCAGCCGAGAACAGCCCGGAAGTTACAGTaGTGCACCGGAATATCTGTGGTCTGGAACTCTTTGAGATCTTCC +
Preference number: 1 (lower is better)
Translates to: TEALQRQPRTARKLQ*CTGISVVWNSLRSS
Trigger: GGAAGATCTCAAAGAGTTCCAGACCACAGATATTCCGGTGCATCACTGTAACTTCCGGGCTGTTCTCGGCTGCCTTTGTAGCGCTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR GCA 90 bp TCCATCCATCTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTaGCATAACTTAAGGTCACGTGGATGCAAGCAGTGTCAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: SIHLFSLASVRFRVI*HNLRSRGCKQCQPW
Trigger: CCAAGGCTGACACTGCTTGCATCCACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAGATGGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR TCA 90 bp GTACCGGCTTTTGCTGAAGGTCTACATGGGAAGAAGAGCATCATTTaGTATTCAGTAGATCTGCCACACCCAACTGGCTCCATCTCCTGG +
Preference number: 1 (lower is better)
Translates to: VPAFAEGLHGKKSII*YSVDLPHPTGSISW
Trigger: CCAGGAGATGGAGCCAGTTGGGTGTGGCAGATCTACTGAATATCAAATGATGCTCTTCTTCCCATGTAGACCTTCAGCAAAAGCCGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 90 bp CCTCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTaGCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCA +
Preference number: 1 (lower is better)
Translates to: PRTRRSSVCWPVGFL*LVPFVGSFQSKYLS
Trigger: TGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR TCA 90 bp ACACCTAAGAAGGATTTGGGGCCTCTGTCAGTAACAAATAAAAGCTaGCCTCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: TPKKDLGPLSVTNKS*PRTRRSSVCWPVGF
Trigger: GAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGAGGTCAGCTTTTATTTGTTACTGACAGAGGCCCCAAATCCTTCTTAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 90 bp CCAGAATCTCTGTCTGTGCTAGAGATCAACTGTACTCTGCCCACCTaGGGAACACATCCTCTGGGTAAAGTACTCGGAAGTAAATTACAT +
Preference number: 1 (lower is better)
Translates to: PESLSVLEINCTLPT*GTHPLGKVLGSKLH
Trigger: ATGTAATTTACTTCCGAGTACTTTACCCAGAGGATGTGTTCCCCAGGTGGGCAGAGTACAGTTGATCTCTAGCACAGACAGAGATTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CCA 90 bp AACAGCCAGCTGCTCCCTTATGGAGGTCTCTTCATTAATAATTATTaGATAGATAGAGAAGGTGAGCCTGTGGCTTCCAAGTACCGGCTT +
Preference number: 1 (lower is better)
Translates to: NSQLLPYGGLFINNY*IDREGEPVASKYRL
Trigger: AAGCCGGTACTTGGAAGCCACAGGCTCACCTTCTCTATCTATCCAATAATTATTAATGAAGAGACCTCCATAAGGGAGCAGCTGGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CCA 90 bp GGTGGTAGGACTGATACAGAACAGCTGCTTTCTTCCCAGTACCCCTaGGAATTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGT +
Preference number: 1 (lower is better)
Translates to: GGRTDTEQLLSSQYP*EFQCRLNVKLNTDS
Trigger: ACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGTATCAGTCCTACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR TCA 90 bp ATTATCTTAAGCTTCTCTACTCAATGGGAGGTACACACAGAGACCTaGGAATATGCAGAGGCCAGAATCTCTGTCTGTGCTAGAGATCAA +
Preference number: 1 (lower is better)
Translates to: IILSFSTQWEVHTET*EYAEARISVCARDQ
Trigger: TTGATCTCTAGCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCCCATTGAGTAGAGAAGCTTAAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 90 bp GATACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATaGAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTT +
Preference number: 1 (lower is better)
Translates to: DTEQLLSSQYPWEFQ*RLNVKLNTDSGYQF
Trigger: AAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR TCA 90 bp AGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTaGCTCTATAGTGCACTGCAGCTTTATGTCATACCAACATTCAAA +
Preference number: 1 (lower is better)
Translates to: SSTIKPCIRSGNSMT*LYSALQLYVIPTFK
Trigger: TTTGAATGTTGGTATGACATAAAGCTGCAGTGCACTATAGAGTCAAGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp GAAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCTCACCTGGATGGACTaGCAGCTGGCAGGCACCGAC +
Preference number: 2 (lower is better)
Translates to: EVAPHGGRLQPPSGSGLLLTWMD*QLAGTD
Trigger: GTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAG...CAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 90 bp GGACTGCCAGCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTaGTCTTCTCGTGATCATGTACGGCGCCAGCGTGGTGCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: GLPAGRHRRSSSHLC*SSRDHVRRQRGAGP
Trigger: AGGGCCAGCACCACGCTGGCGCCGTACATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR-3UTR GCA 90 bp CTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTCTCACCTGGATGGACTaGCAGCTGGCAGGCACCGAC +
Preference number: 2 (lower is better)
Translates to: LTEAAFSLLAAVGYCTGILTWMD*QLAGTD
Trigger: GTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAG...AATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTGGATGGACTGCCAGCTaGCAGGCACCGACGGAGCAG +
Preference number: 2 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVAGWTAS*QAPTEQ
Trigger: CTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCC...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCATGTTGTCAGGGAAGTaGCTCCTCACGGAGGCCGCC +
Preference number: 2 (lower is better)
Translates to: GTELEQVRQLDQQYTILRMLSGK*LLTEAA
Trigger: GGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACAT...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCCCTACCCCAACCCTaGACAGCCTCCTCCCACACT +
Preference number: 2 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSLPQP*TASSHT
Trigger: AGTGTGGGAGGAGGCTGTGCAGGGTTGGGGTAGGGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCAAAGCAGTGTCAGCCTTaGGCCCCCGCTCCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: ASSQLTSNILENHPSPPAKQCQP*APAPRP
Trigger: AGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTT...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTGTACGGCGCCAGCGTaGTGCTGGCCCTGCGTAGCT +
Preference number: 2 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQCTAPA*CWPCVA
Trigger: AGCTACGCAGGGCCAGCACCACGCTGGCGCCGTACA...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR-3UTR TCA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTTCCTCCGCTCGCCCCTaGTATACGGTGGCGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFSSARP*YTVAWL
Trigger: CAGCCACGCCACCGTATATCAGGGGCGAGCGGAGGA...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp GTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGACGCAAGGGTCTCACCTaGATGGACTGCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: VAVSLGLGVLTMGVLLQGRKGLT*MDCQLA
Trigger: TGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCG...TCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGCTACTGCACAGGCATTaGTGTTTACCTCCACGTGGC +
Preference number: 2 (lower is better)
Translates to: TELEQVRQLDQQYTILRSLLHRH*CLPPRG
Trigger: GCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAG...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp TTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGAGCAGGTTCGGCAGCTaGACCAGCAGTACACGATCC +
Preference number: 2 (lower is better)
Translates to: FMLIPEHHGNGRRPSPRRSRFGS*TSSTRS
Trigger: GGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCT...CCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR TCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGCACACCCCATTAGTCTaGGATAAGGTGATTTCTCTG +
Preference number: 2 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLHTPLV*DKVISL
Trigger: CAGAGAAATCACCTTATCTCAGACTAATGGGGTGTG...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp GAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTACCTCCACGTGGCTCTaGAGATCAATAGCACCGACA +
Preference number: 2 (lower is better)
Translates to: EPRVEQCCQGSGSSRRPPTSTWL*RSIAPT
Trigger: TGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGT...AGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCAGCAGCAGCCACCTTTaGTTGTCTTCTCGTGATCAT +
Preference number: 2 (lower is better)
Translates to: GTELEQVRQLDQQYTILRSSSHL*LSSRDH
Trigger: ATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCT...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR-3UTR CCA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCATGTTGTCAGGGAAGTaGCTCCTCACGGAGGCCGCC +
Preference number: 2 (lower is better)
Translates to: GIGVYLHVALQINSTDTCMLSGK*LLTEAA
Trigger: GGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACAT...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp GCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCTGGGGGTCCTCACCATaGGTGTTTTACTCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: AKSRTMLSGKWLLTEAAFWGSSP*VFYSKE
Trigger: CTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCA...GAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGGCGCCAGCGTGGTGCTaGCCCTGCGTAGCTACCGAG +
Preference number: 2 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQAPAWC*PCVATE
Trigger: CTCGGTAGCTACGCAGGGCCAGCACCACGCTGGCGC...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR CAA 90 bp CTCACCATGGGTGTTTTACTCCAAGGAGCCAAGAGTCGAACAATGTaGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTA +
Preference number: 2 (lower is better)
Translates to: LTMGVLLQGAKSRTM*SGKWLLTEAAFSLL
Trigger: TAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTCCTTGGAGTAAAACACCCATGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCTCCCTACCCCAACCCTaGACAGCCTCCTCCCACACT +
Preference number: 2 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCSLPQP*TASSHT
Trigger: AGTGTGGGAGGAGGCTGTGCAGGGTTGGGGTAGGGA...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp TCCCACAGTATCACACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGTAGCAGGTTCGGCAGCTaGACCAGCAGTACACGATCC +
Preference number: 2 (lower is better)
Translates to: SHSITRLLSFEPPHIPVGSRFGS*TSSTRS
Trigger: GGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCT...ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp GGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATAAGAGAGAGGCTCTATaGCCGCAAGGGTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: GLLASSASCHLWVPFSPNKREAL*PQGSHL
Trigger: CAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTT...ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGAATAGCACCGACACTTaGAAAACAAGAGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: TELEQVRQLDQQYTILRSNSTDT*KTRERL
Trigger: GAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATT...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTGCGGCAGTGGGCTACTaGACAGGCATTGGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFAAVGY*TGIGVY
Trigger: GTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGC...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp AATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGGCTTCCTCTGCCTCGTaGCATTTGTGGGTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: NGRRPSPRRTPKKDLGPLASSAS*HLWVPF
Trigger: GAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC...CAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp CTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTTGTCTTCTCGTGATCATGGTGTTTACCTCCACGTaGCTCTGCAGATCAATAGCA +
Preference number: 2 (lower is better)
Translates to: LAGTDGAAATFACLLVIMVFTST*LCRSIA
Trigger: TGCTATTGATCTGCAGAGCCACGTGGAGGTAAACAC...CATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACTCTCTGCCTATGGATaGAGGTGCCGGGCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: PIPPHARERRQSLNFPGKLSAYG*RCRAAS
Trigger: AGAGGCAGCCCGGCACCTTCATCCATAGGCAGAGAG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp TCCCACAGTATCACACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGTACCTCCACGTGGCTCTaGAGATCAATAGCACCGACA +
Preference number: 2 (lower is better)
Translates to: SHSITRLLSFEPPHIPVGTSTWL*RSIAPT
Trigger: TGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGT...ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCTGTACTCTGCCCACCTaGGGAACACATCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCCTLPT*GTHPLG
Trigger: ACCCAGAGGATGTGTTCCCCAGGTGGGCAGAGTACA...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp GCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGGCCTCGTGCCATTTGTaGGTTCCTTTCAGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: AGDPLPEGHLRRIWGLCQASCHL*VPFSPN
Trigger: ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGC...CTGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR TCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGACAGGAGAATGGCTTaGACCCAGGGACAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMDRRMA*TQGQRL
Trigger: CAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR TCA 90 bp ACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACTCCTCTTGTAGGAACTaGTCTGAAAACATCGTTCGA +
Preference number: 2 (lower is better)
Translates to: TSFEGTELEQVRQLDQQYSSCRN*SENIVR
Trigger: TCGAACGATGTTTTCAGATCAGTTCCTACAAGAGGA...GTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTCCCTACCCCAACCCTaGACAGCCTCCTCCCACACT +
Preference number: 2 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPSLPQP*TASSHT
Trigger: AGTGTGGGAGGAGGCTGTGCAGGGTTGGGGTAGGGA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACCCCAGGGACAGAGGCTaGAGTGACCCGAGACCCCAC +
Preference number: 2 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNPRDRG*SDPRPH
Trigger: GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGG...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR GCA 90 bp GGGGACTTGAACCTGGTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCAAGAGAGAGGCTCTATaGCCGCAAGGGTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: GDLNLVVLLSVHLYFSSCKREAL*PQGSHL
Trigger: CAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTT...GCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCACCAGGTTCAAGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR GCA 90 bp TATACGGTGGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTAATAGCACCGACACTTaGAAAACAAGAGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: YTVAWLFLWVWGSSPWVFNSTDT*KTRERL
Trigger: GAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATT...AAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGCTGAGACAGGAGAATaGCTTGAACCCAGGGACAGA +
Preference number: 2 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLAETGE*LEPRDR
Trigger: TCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCGGCTCTCACACTTTTTaGCTCCGAGTTCAACCCCAC +
Preference number: 2 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCGSHTF*LRVQPH
Trigger: GTGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCC...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp CTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGTCGCAAGGGTCTCACCTaGATGGACTGCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: LPLPRAICGFLSVQISISRKGLT*MDCQLA
Trigger: TGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCG...ACTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp CTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTTGTCTTCTCGTGATCATGGGAATATCTGTGGTCTaGAACTCTTTGAGATCTTCC +
Preference number: 2 (lower is better)
Translates to: LAGTDGAAATFACLLVIMGISVV*NSLRSS
Trigger: GGAAGATCTCAAAGAGTTCCAGACCACAGATATTCC...CATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGGACAGAGGCTGCAGTaGCCCGAGACCCCACCATTG +
Preference number: 2 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNGQRLQ*PETPPL
Trigger: CAATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATCTTCCCAGTACCCCTaGGAATTCCAATGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: ASSQLTSNILENHPSPPASSQYP*EFQCRL
Trigger: TAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CAA 90 bp ATAAAAGCTGACCTCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTaGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: IKADLGQEDLQSVGL*ASSASCHLWVPFSP
Trigger: TGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGAGGTCAGCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 90 bp GTAAAAAGCGGGGACTTGAACCTGGTGGTCCTGCTCTCGGTTCATTaGTATTTCTCTTCATGCTCATCCCTGAACACCACGGGAATGGCA +
Preference number: 2 (lower is better)
Translates to: VKSGDLNLVVLLSVH*YFSSCSSLNTTGMA
Trigger: TGCCATTCCCGTGGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCACCAGGTTCAAGTCCCCGCTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR TCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCATCCAGCCTGAGCGACTaGGCAAGACTCCGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: LFSLASVRFRVICHNLRSSSLSD*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGTCGCTCAGGCTGGA...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTCCAGCCTGAGCGACTaGGCAAGACTCCGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSSLSD*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGTCGCTCAGGCTGGA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR TCA 90 bp GTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTGAACACCGCCCGGAAGTTACAGTaGTGCACCGGAATATCTGTG +
Preference number: 2 (lower is better)
Translates to: VVLLSVHLYFSSCSSLNTARKLQ*CTGISV
Trigger: CACAGATATTCCGGTGCATCACTGTAACTTCCGGGC...GGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCCCAGGGACAGAGGCTaGAGTGACCCGAGACCCCAC +
Preference number: 2 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIPRDRG*SDPRPH
Trigger: GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGG...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGGCTCTCACACTTTTTaGCTCCGAGTTCAACCCCAC +
Preference number: 2 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNGSHTF*LRVQPH
Trigger: GTGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTGGCTCTCACACTTTTTaGCTCCGAGTTCAACCCCAC +
Preference number: 2 (lower is better)
Translates to: FSLASVRFRVICHNLRSRGSHTF*LRVQPH
Trigger: GTGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCC...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp CTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGTCTACTGCACAGGCATTaGTGTTTACCTCCACGTGGC +
Preference number: 2 (lower is better)
Translates to: LPLPRAICGFLSVQISISLLHRH*CLPPRG
Trigger: GCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAG...ACTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CCA 90 bp GCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGCTATCAGTAAGGTCCTaGTTGAATAGACAAATCCAT +
Preference number: 2 (lower is better)
Translates to: AGDPLPEGHLRRIWGLCQLSVRS*LNRQIH
Trigger: ATGGATTTGTCTATTCAACCAGGACCTTACTGATAG...CTGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTCCAGCCTGAGCGACTaGGCAAGACTCCGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSSLSD*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGTCGCTCAGGCTGGA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGGACAGAGGCTGCAGTaGCCCGAGACCCCACCATTG +
Preference number: 2 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIGQRLQ*PETPPL
Trigger: CAATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTCCAGAGCCAGCCCCTaGTGGCTCTCACACTTTTTG +
Preference number: 2 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSRASP*WLSHFL
Trigger: CAAAAAGTGTGAGAGCCATCAGGGGCTGGCTCTGGA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR GCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCACCCTGGGAATTCCAATaGAGGTTAAATGTGAAACTT +
Preference number: 2 (lower is better)
Translates to: ASSQLTSNILENHPSPPAPWEFQ*RLNVKL
Trigger: AAGTTTCACATTTAACCTGCATTGGAATTCCCAGGG...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGGTGTTTACCTCCACGTaGCTCTGCAGATCAATAGCA +
Preference number: 2 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQVFTST*LCRSIA
Trigger: TGCTATTGATCTGCAGAGCCACGTGGAGGTAAACAC...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGACAGGAGAATGGCTTaGACCCAGGGACAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTDRRMA*TQGQRL
Trigger: CAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACACACCCCATTAGTCTaGGATAAGGTGATTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PIPPHARERRQSLNFPGKHTPLV*DKVISL
Trigger: CAGAGAAATCACCTTATCTCAGACTAATGGGGTGTG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGTAATCACAGCACTTTaGGAGGCAGAGGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNVITAL*EAEEGG
Trigger: TCCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTAC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCATCCATCTGTTCTCATTaGCCTCAGTCCGTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: QLAPSPGKQHSLQATVIASICSH*PQSVSE
Trigger: CTCTGAAACGGACTGAGGCCAATGAGAACAGATGGA...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CAA 90 bp TGGATAGATAGAGAAGGTGAGCCTGTGGCTTCCAAGTACCGGCTTTaGCTGAAGGTCTACATGGGAAGAAGAGCATCATTTGATATTCAG +
Preference number: 2 (lower is better)
Translates to: WIDREGEPVASKYRL*LKVYMGRRASFDIQ
Trigger: CTGAATATCAAATGATGCTCTTCTTCCCATGTAGACCTTCAGCAAAAGCCGGTACTTGGAAGCCACAGGCTCACCTTCTCTATCTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR TCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGCTCTCTGCCTATGGATaGAGGTGCCGGGCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQLSAYG*RCRAAS
Trigger: AGAGGCAGCCCGGCACCTTCATCCATAGGCAGAGAG...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGCTGAGACAGGAGAATaGCTTGAACCCAGGGACAGA +
Preference number: 2 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQAETGE*LEPRDR
Trigger: TCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGTAATCACAGCACTTTaGGAGGCAGAGGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQVITAL*EAEEGG
Trigger: TCCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTAC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAACCCCACACAGCTATaGTTTAGAAATGTAGACGCA +
Preference number: 2 (lower is better)
Translates to: FSLASVRFRVICHNLRSRNPTQL*FRNVDA
Trigger: TGCGTCTACATTTCTAAACCATAGCTGTGTGGGGTT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGTACACACAGAGACCTaGGAATATGCAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTVHTET*EYAEAR
Trigger: TCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTAC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGACTCTATAGTGCACTaGAGCTTTATGTCATACCAA +
Preference number: 2 (lower is better)
Translates to: QLAPSPGKQHSLQATVIADSIVH*SFMSYQ
Trigger: TTGGTATGACATAAAGCTGCAGTGCACTATAGAGTC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTCACCTAAACTCTGTGTaGGCCACTATGTTCCCTACT +
Preference number: 2 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTHLNSV*ATMFPT
Trigger: AGTAGGGAACATAGTGGCTCACACAGAGTTTAGGTG...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGAAGATTGGCTCGAGTaGAGATTCAAAAATAAAAAG +
Preference number: 2 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAEDWLE*RFKNKK
Trigger: CTTTTTATTTTTGAATCTGCACTCGAGCCAATCTTC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR GCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTACAACCCGAAGGTTCTaGCATCTAAGTAAGATGTTT +
Preference number: 2 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTTTRRF*HLSKMF
Trigger: AAACATCTTACTTAGATGGCAGAACCTTCGGGTTGT...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTAGTAGTTTGACAATCTaGGGACTCAAGTTCAGATTC +
Preference number: 2 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTSSLTI*GLKFRF
Trigger: GAATCTGAACTTGAGTCCCCAGATTGTCAAACTACT...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 72 bp AGGCTCTATGCCCGCAAGGGTCTCACCTGGATGGACTaGCAGCTGGCAGGCACCGACGGAGCAGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: RLYARKGLTWMD*QLAGTDGAAAT
Trigger: GGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 72 bp ATGCCCGCAAGGGTCTCACCTGGATGGACTGCCAGCTaGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: MPARVSPGWTAS*QAPTEQQPPLL
Trigger: AAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 72 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTaGACAGGCATTGGTGTTTACCTCCACGTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: EAAFSLLAAVGY*TGIGVYLHVAL
Trigger: CAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 72 bp CCAGCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTaGTTGTCTTCTCGTGATCATGTACGGCGCCAGCGT +
Preference number: 3 (lower is better)
Translates to: PAGRHRRSSSHL*LSSRDHVRRQR
Trigger: ACGCTGGCGCCGTACATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR CCA 72 bp ACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTaGATGGACTGCCAGCTGGCAGGCACCGACGGAGCA +
Preference number: 3 (lower is better)
Translates to: TRERLYARKGLT*MDCQLAGTDGA
Trigger: TGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 72 bp GCAGTACACGATCCTCCGCTCGCCCCTGATATACGGTaGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: AVHDPPLAPDIR*RGCFSGSGGPH
Trigger: GTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATATCAGGGGCGAGCGGAGGATCGTGTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 72 bp GAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTaGAGTGACCCGAGACCCCACCATTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: ETGEWLEPRDRG*SDPRPHHCTPA
Trigger: GGCTGGAGTGCAATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CAA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGTGGCTCTCACACTTTTaGGCTCCGAGTTCAACCCCA +
Preference number: 3 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLWLSHF*APSSTP
Trigger: TGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCCA...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCCCGAGACCCCACCATaGCACTCCAGCCTGAGCGAC +
Preference number: 3 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLPETPP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGGTGGGGTCTCGGG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CAA 90 bp TCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGAGCTACTGCACAGGCATaGGTGTTTACCTCCACGTGG +
Preference number: 3 (lower is better)
Translates to: SCSSLNTTGMAGDPLPEGATAQA*VFTSTW
Trigger: CCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGC...TCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 72 bp GCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATaGGTGTTTTACTCCAAGGAGCCAAGAGTCGAACAA +
Preference number: 3 (lower is better)
Translates to: AWLFLWVWGSSP*VFYSKEPRVEQ
Trigger: TTGTTCGACTCTTGGCTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCACCCGAGACCCCACCATaGCACTCCAGCCTGAGCGAC +
Preference number: 3 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAPETPP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGGTGGGGTCTCGGG...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CAA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCAAGACAGGAGAATGGCTaGAACCCAGGGACAGAGGCT +
Preference number: 3 (lower is better)
Translates to: ASSQLTSNILENHPSPPARQENG*NPGTEA
Trigger: AGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCT...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CAA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATGCTACTGCACAGGCATaGGTGTTTACCTCCACGTGG +
Preference number: 3 (lower is better)
Translates to: GQEDLQSVGLLASSASCHATAQA*VFTSTW
Trigger: CCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGC...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp ACTGAATGGCTTGGCCAAGATGACAAGGCAGTAAAAAGCGGGGACTTGAACCTGCAGTCTGTTGGCCTGTaGGCTTCCTCTGCCTCGTGC +
Preference number: 3 (lower is better)
Translates to: TEWLGQDDKAVKSGDLNLQSVGL*ASSASC
Trigger: GCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTG...CAGGTTCAAGTCCCCGCTTTTTACTGCCTTGTCATCTTGGCCAAGCCATTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 72 bp CTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTaGAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: LHVALQINSTDT*KTRERLYARKG
Trigger: ACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 72 bp ACCTCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTaGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTT +
Preference number: 3 (lower is better)
Translates to: TSDKKIFSLLAC*LPLPRAICGFL
Trigger: AAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAGAGTCGAACAATGTaGTCAGGGAAGTGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: GIGVYLHVALQINSTDTCKSRTM*SGKWLL
Trigger: GAGGAGCCACTTCCCTGACAACATTGTTCGACTCTT...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp GGAACTGATCTGAAAACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGAAGAGTCGAACAATGTaGTCAGGGAAGTGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: GTDLKTSFEGTELEQVRQKSRTM*SGKWLL
Trigger: GAGGAGCCACTTCCCTGACAACATTGTTCGACTCTT...CTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGTTTTCAGATCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCGAGACCCCACCATaGCACTCCAGCCTGAGCGAC +
Preference number: 3 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQPETPP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGGTGGGGTCTCGGG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR TCA 72 bp TCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTaGACACCACGGGAATGGCAGGAGACCCTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: SRFICISLHAHP*TPREWQETLSQ
Trigger: CTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR TCA 72 bp CTACAAAGGCAGCCGAGAACAGCCCGGAAGTTACAGTaGTGCACCGGAATATCTGTGGTCTGGAACTCTTTG +
Preference number: 3 (lower is better)
Translates to: LQRQPRTARKLQ*CTGISVVWNSL
Trigger: CAAAGAGTTCCAGACCACAGATATTCCGGTGCATCACTGTAACTTCCGGGCTGTTCTCGGCTGCCTTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
3UTR CCA 72 bp ACACTTTTTGGCTCCGAGTTCAACCCCACACAGCTATaGTTTAGAAATGTAGACGCAGGGCTGGGCATGGTG +
Preference number: 3 (lower is better)
Translates to: TLFGSEFNPTQL*FRNVDAGLGMV
Trigger: CACCATGCCCAGCCCTGCGTCTACATTTCTAAACCATAGCTGTGTGGGGTTGAACTCGGAGCCAAAAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR CCA 72 bp CTGTCTGTGCTAGAGATCAACTGTACTCTGCCCACCTaGGGAACACATCCTCTGGGTAAAGTACTCGGAAGT +
Preference number: 3 (lower is better)
Translates to: LSVLEINCTLPT*GTHPLGKVLGS
Trigger: ACTTCCGAGTACTTTACCCAGAGGATGTGTTCCCCAGGTGGGCAGAGTACAGTTGATCTCTAGCACAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCATGTAATCACAGCACTTaGGGAGGCAGAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LFSLASVRFRVICHNLRSCNHST*GGRGGW
Trigger: CCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTACA...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTGTAATCACAGCACTTaGGGAGGCAGAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: FSLASVRFRVICHNLRSRCNHST*GGRGGW
Trigger: CCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTACA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 72 bp ACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTaGAGATCAATAGCACCGACACTTGCAAAACAAGAG +
Preference number: 3 (lower is better)
Translates to: TAQALVFTSTWL*RSIAPTLAKQE
Trigger: CTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR GCA 72 bp AGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTaGCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAA +
Preference number: 3 (lower is better)
Translates to: RRSSVCWPVGFL*LVPFVGSFQSK
Trigger: TTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTGGCTCTCACACTTTTaGGCTCCGAGTTCAACCCCA +
Preference number: 3 (lower is better)
Translates to: FSLASVRFRVICHNLRSRWLSHF*APSSTP
Trigger: TGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCCA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR TCA 72 bp TTAGAGTGTACCAAATCCCCCAAGAGTGTATCCCAATaGCACGTGCATATGAGCATGGGGCCTCTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: LECTKSPKSVSQ*HVHMSMGPLRR
Trigger: TCTTCTCAGAGGCCCCATGCTCATATGCACGTGTCATTGGGATACACTCTTGGGGGATTTGGTACACTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 72 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTaGCATAACTTAAGGTCACGTGGATGCAAGCAGTGT +
Preference number: 3 (lower is better)
Translates to: LFSLASVRFRVI*HNLRSRGCKQC
Trigger: ACACTGCTTGCATCCACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 72 bp CTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTaGCATTTGTGGGTTCCTTTCAGTCCAAATATCTAT +
Preference number: 3 (lower is better)
Translates to: LQSVGLLASSAS*HLWVPFSPNIY
Trigger: ATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CCA 72 bp CACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTaGGTGAAGATTGGCAGACTTAGCTTCATTTGTCAT +
Preference number: 3 (lower is better)
Translates to: HGCFHLSLPTSL*VKIGRLSFICH
Trigger: ATGACAAATGAAGCTAAGTCTGCCAATCTTCACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTGTAATCACAGCACTTaGGGAGGCAGAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNCNHST*GGRGGW
Trigger: CCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTACA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CAA 90 bp GACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTCAGTAAGGTCCTGGTaGAATAGACAAATCCATCCA +
Preference number: 3 (lower is better)
Translates to: DKKIFSLLACWLPLPRAISVRSW*NRQIHP
Trigger: TGGATGGATTTGTCTATTCAACCAGGACCTTACTGA...AATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGAGACAGGAGAATGGCTaGAACCCAGGGACAGAGGCT +
Preference number: 3 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQRQENG*NPGTEA
Trigger: AGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCACTGCCTCTAAGAAGATaGGCTCGAGTGCAGATTCAA +
Preference number: 3 (lower is better)
Translates to: QLAPSPGKQHSLQATVIALPLRR*ARVQIQ
Trigger: TTGAATCTGCACTCGAGCCAATCTTCTTAGAGGCAG...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR TCA 72 bp AAGGTGAGCCTGTGGCTTCCAAGTACCGGCTTTTGCTaGAGGTCTACATGGGAAGAAGAGCATCATTTGATA +
Preference number: 3 (lower is better)
Translates to: KVSLWLPSTGFC*RSTWEEEHHLI
Trigger: TATCAAATGATGCTCTTCTTCCCATGTAGACCTTCAGCAAAAGCCGGTACTTGGAAGCCACAGGCTCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR TCA 72 bp TTTGCTGAAGGTCTACATGGGAAGAAGAGCATCATTTaGTATTCAGTAGATCTGCCACACCCAACTGGCTCC +
Preference number: 3 (lower is better)
Translates to: FAEGLHGKKSII*YSVDLPHPTGS
Trigger: GGAGCCAGTTGGGTGTGGCAGATCTACTGAATATCAAATGATGCTCTTCTTCCCATGTAGACCTTCAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 72 bp CAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATaGAGGTTAAATGTGAAACTTAACACTGATAGTGGC +
Preference number: 3 (lower is better)
Translates to: QLLSSQYPWEFQ*RLNVKLNTDSG
Trigger: GCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
3UTR CCA 72 bp CATCATTTGATATTCAGTAGATCTGCCACACCCAACTaGCTCCATCTCCTGGAAAACAGCACTCACTACAAG +
Preference number: 3 (lower is better)
Translates to: HHLIFSRSATPN*LHLLENSTHYK
Trigger: CTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTGGGTGTGGCAGATCTACTGAATATCAAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCACACACAGAACAACATTaGGAATTACAGAGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAHTEQH*ELQSSA
Trigger: AGCAGAACTCTGTAATTCCAAATGTTGTTCTGTGTG...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR GCA 72 bp CACATGTATTTTTCTTTCTTCCATGGACTCCTAAACTaGTCCCACAATCAGCAGTGTTCTTCTCTCAGAAAT +
Preference number: 3 (lower is better)
Translates to: HMYFSFFHGLLN*SHNQQCSSLRN
Trigger: ATTTCTGAGAGAAGAACACTGCTGATTGTGGGAGCAGTTTAGGAGTCCATGGAAGAAAGAAAAATACATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CCA 72 bp GGTTCCTTTCAGTCCAAATATCTATCAGTAAGGTCCTaGTTGAATAGACAAATCCATCCATACAATGAAGTC +
Preference number: 3 (lower is better)
Translates to: GSFQSKYLSVRS*LNRQIHPYNEV
Trigger: GACTTCATTGTATGGATGGATTTGTCTATTCAACCAGGACCTTACTGATAGATATTTGGACTGAAAGGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR TCA 72 bp TACACTATAATGAGTCTTAAGACTACAATACGACAATaGTTGCACAAAACCGTAAGATATGAGCCCACTGTC +
Preference number: 3 (lower is better)
Translates to: YTIMSLKTTIRQ*LHKTVRYEPTV
Trigger: GACAGTGGGCTCATATCTTACGGTTTTGTGCAATCATTGTCGTATTGTAGTCTTAAGACTCATTATAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGCCCACGGCGCCAGCGTGGTaGTGGCCCTGCGTAGCTACC +
Preference number: 4 (lower is better)
Translates to: ELEQVRQLDQQYTILRSPTAPAW*WPCVAT
Trigger: GGTAGCTACGCAGGGCCAGCACCACGCTGGCGCCGT...GGGCGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGGCTGCAGCGCCGCTCTaGCCTCGGAAGCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLAAAPL*PRKQGS
Trigger: ACTGCCTTGCTTCCGAGGCCAGAGCGGCGCTGCAGC...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGGTCCGATCCTCTTCATaGGGCTCAGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLVRSSS*GSGSSR
Trigger: CCGGCTCGAGCCTGAGCCCCATGAAGAGGATCGGAC...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGTCCCTACCCCAACCCTaGACAGCCTCCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLSLPQP*TASSHT
Trigger: AGTGTGGGAGGAGGCTGTGCAGGGTTGGGGTAGGGA...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCCCAGGGACAGAGGCTaGAGTGACCCGAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHPRDRG*SDPRPH
Trigger: GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGGGATGGACTGCCAGCTaGCAGGCACCGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TELEQVRQLDQQYTILRSGWTAS*QAPTEQ
Trigger: CTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCC...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTATGTTGTCAGGGAAGTaGCTCCTCACGGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LTEAAFSLLAAVGYCTGIMLSGK*LLTEAA
Trigger: GGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACAT...AATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp AAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCGCTAAAGCTACTTGCTaGATCGGCAGTGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KWLLTEAAFSLLAAVGYCAKATC*IGSVRA
Trigger: CGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGC...GCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGCCACACTGTGCCCAGTaGGGCAGTCATAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLPHCAQ*GSHSAV
Trigger: CACAGCACTATGACTGCCCCACTGGGCACAGTGTGG...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTCGCAAGGGTCTCACCTaGATGGACTGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVRKGLT*MDCQLA
Trigger: TGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCG...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 72 bp GCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTaGTCTTCTCGTGATCATGTACGGCGCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AGRHRRSSSHLC*SSRDHVRRQRG
Trigger: ACCACGCTGGCGCCGTACATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHWSFTL*ASSGSC
Trigger: GCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGTCCAGCCTGAGCGACTaGGCAAGACTCCGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLSSLSD*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGTCGCTCAGGCTGGA...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGGACAGAGGCTGCAGTaGCCCGAGACCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRGQRLQ*PETPPL
Trigger: CAATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GAAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGACGGTTGCTTTCATTTaGGCCTCCCCACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: EVAPHGGRLQPPSGSGLLTVAFI*ASPHPC
Trigger: ACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGT...CAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTISAIVH*SRRGSS
Trigger: GGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTCCCTACCCCAACCCTaGACAGCCTCCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSLPQP*TASSHT
Trigger: AGTGTGGGAGGAGGCTGTGCAGGGTTGGGGTAGGGA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTCACCTGGATGGACTaGCAGCTGGCAGGCACCGAC +
Preference number: 4 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVALTWMD*QLAGTD
Trigger: GTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAG...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGGGAGAAGAGGGTGTCTaGCAGCCTCGTGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLGEEGV*QPRECI
Trigger: AATGCACTCACGAGGCTGCCAGACACCCTCTTCTCC...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCCCACTGCTAGAGGATaGAGTGGCTGGCTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHPTARG*SGWLRG
Trigger: GCCCCTAAGCCAGCCACTCCATCCTCTAGCAGTGGG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCAGTCTGTTGGCCTGTTaGCTTCCTCTGCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: GTELEQVRQLDQQYTILRSLLAC*LPLPRA
Trigger: GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACT...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACAATAGCACCCAGCAATaGCCACGCTGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHNSTQQ*PRCSCW
Trigger: CCAGCAGGAGCAGCGTGGTCATTGCTGGGTGCTATT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTTGCTTGTCTTCTCGTaGTCATGTACGGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVLLVFS*SCTAPA
Trigger: CGCTGGCGCCGTACATGATCACGAGAAGACAAGCAA...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp TCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCTCCTCCGCTCGCCCCTaGTATACGGTGGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SDKKIFSLLACWLPLPRASSARP*YTVAWL
Trigger: CAGCCACGCCACCGTATATCAGGGGCGAGCGGAGGA...GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TATACGGTGGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YTVAWLFLWVWGSSPWVFSAIVH*SRRGSS
Trigger: GGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGA...AAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVAPHGGRLQPPSGSGLLQAKAT*WIGSVR
Trigger: CCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTG...CAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTCTCCCCACATCCCTGTaGGTGAAGATTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: LTEAAFSLLAAVGYCTGILPTSL*VKIGRL
Trigger: AAGTCTGCCAATCTTCACCCACAGGGATGTGGGGAG...AATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACGCAACCCTATCTGGGTaGCAGAGCGAGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHATLSG*QSETLS
Trigger: AGACAAGGTCTCGCTCTGTCACCCAGATAGGGTTGC...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCTCTATGAGAGGGGGTaGGTTCTCCAGATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTILYERG*VLQIPP
Trigger: GGGAGGGATCTGGAGAACTCACCCCCTCTCATAGAG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTGACAGGAGAATGGCTTaGACCCAGGGACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIDRRMA*TQGQRL
Trigger: CAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTC...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTCCAGAGCCAGCCCCTaGTGGCTCTCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSRASP*WLSHFL
Trigger: CAAAAAGTGTGAGAGCCATCAGGGGCTGGCTCTGGA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTAATAGCACCCAGCAATaGCCACGCTGCTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTINSTQQ*PRCSCW
Trigger: CCAGCAGGAGCAGCGTGGTCATTGCTGGGTGCTATT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TCCCACAGTATCACACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGTTCCTCCGCTCGCCCCTaGTATACGGTGGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHSITRLLSFEPPHIPVGSSARP*YTVAWL
Trigger: CAGCCACGCCACCGTATATCAGGGGCGAGCGGAGGA...ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTTGGATGCTTGCCGTTaGCATCGCTGGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTILDACR*HRWYSA
Trigger: GGCCGAGTACCAGCGATGGCAACGGCAAGCATCCAA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACACCACCTTGGATGCTTaGCGTTGCCATCGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHTTLDA*RCHRWY
Trigger: GTACCAGCGATGGCAACGGCAAGCATCCAAGGTGGT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp AATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NGRRPSPRRTPKKDLGPLSAIVH*SRRGSS
Trigger: GGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGA...CAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACACCTCGGCACAGGACTaGTTGGCACGTGCCAACATT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHTSAQD*LARANI
Trigger: AATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCACCCAGGGACAGAGGCTaGAGTGACCCGAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPAPRDRG*SDPRPH
Trigger: GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGG...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCAGCGTGGTGCTGGCCCTaGGTAGCTACCGAGAACAGA +
Preference number: 4 (lower is better)
Translates to: PRVEQCCQGSGSSRRPPSAWCWP*VATENR
Trigger: TCTGTTCTCGGTAGCTACGCAGGGCCAGCACCACGC...TGAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTGCCGTTGCCATCGCTaGTACTCGGCCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTICRCHR*YSAKVS
Trigger: CGAGACTTTGGCCGAGTACCAGCGATGGCAACGGCA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGCTGGGACACCACCTTaGATGCTTGCCGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRAGTPP*MLAVAI
Trigger: GATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCTGCTGTCAGCCTGTTaGAACTGGCATAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHLLSAC*NWHRGS
Trigger: GGACCCTCTATGCCAGTTCCAACAGGCTGACAGCAG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCAGCAGGCAAAGCCTCTaGAATCAGGATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SGKWLLTEAAFSLLAAVGSRQSL*NQDFCQ
Trigger: TTGACAGAAATCCTGATTCCAGAGGCTTTGCCTGCT...GCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACGGCACAGGACTGCTTaGCACGTGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRRHRTA*HVPTLA
Trigger: AGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATTTAGAGAGGGGCACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRFREGH*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGAGCCAGTTTTCCTCTTaGGCACTTCTGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLSQFSS*ALLWPL
Trigger: AAGTGGCCACAGAAGTGCCCAAGAGGAAAACTGGCT...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCCACACTGTGCCCAGTaGGGCAGTCATAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIPHCAQ*GSHSAV
Trigger: CACAGCACTATGACTGCCCCACTGGGCACAGTGTGG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGAATGGGTCTTGTACGTaGCGTACAGCATTGACAGCT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLNGSCT*RTALTA
Trigger: AGCTGTCAATGCTGTACGTCACGTACAAGACCCATT...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTTCACTGCTCACCTCTaGGGTGGACATCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHFTAHL*GGHLTA
Trigger: AGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCTGTGGCCACTTCAATaGGGTTCAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHLWPLQ*GSGCPL
Trigger: TAGAGGACAGCCTGAACCTCATTGAAGTGGCCACAG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTCCAGCCTGAGCGACTaGGCAAGACTCCGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTISSLSD*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGTCGCTCAGGCTGGA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTAGGACAGGTATGCACTaGTCCGTCAGGAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVRTGMH*SVRRLL
Trigger: CAACAATCTCCTGACGGATCAGTGCATACCTGTCCT...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp GCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGATCGTTCGAGGGCACTaGGCTAGAGCAGGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: AWLFLWVWGSSPWVFYSKIVRGH*ARAGSA
Trigger: TGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGAT...CTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTGGTCTGGAACTCTTTaGGATCTTCCGGAACCTCTG +
Preference number: 4 (lower is better)
Translates to: GTELEQVRQLDQQYTILRWSGTL*DLPEPL
Trigger: CAGAGGTTCCGGAAGATCTCAAAGAGTTCCAGACCA...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTACCACCTTGGATGCTTaGCGTTGCCATCGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTITTLDA*RCHRWY
Trigger: GTACCAGCGATGGCAACGGCAAGCATCCAAGGTGGT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTACCTCGGCACAGGACTaGTTGGCACGTGCCAACATT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTITSAQD*LARANI
Trigger: AATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGCCTCCTCTGGGTCCTaGTCCAGGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRASSGS*SRLKTL
Trigger: TAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTGGACCCCACTTCACTaGTCACCTCTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIWTPLH*SPLRWT
Trigger: TGTCCACCTCAGAGGTGAGCAGTGAAGTGGGGTCCA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCCAGATCCCTCCCCCTaGAGCAGTGGATGTCTACTT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIPDPSP*SSGCLL
Trigger: AAGTAGACATCCACTGCTGCAGGGGGAGGGATCTGG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTCTACCAGGACAGGTATaGACTGATCCGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVLPGQV*TDPSGD
Trigger: ATCTCCTGACGGATCAGTGCATACCTGTCCTGGTAG...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTTGCAAGATTCGCAGGTaGAGGTGCCCTACCAGGACA +
Preference number: 4 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVACKIRR*RCPTRT
Trigger: TGTCCTGGTAGGGCACCTGCACCTGCGAATCTTGCA...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACTGCTGTCAGCCTGTTaGAACTGGCATAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRLLSAC*NWHRGS
Trigger: GGACCCTCTATGCCAGTTCCAACAGGCTGACAGCAG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCCGGCACAGGACTGCTTaGCACGTGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: AVGYCTGIGVYLHVALQIRHRTA*HVPTLA
Trigger: AGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCG...GATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGCCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AGDPLPEGHLRRIWGLCQPLSLL*VLLQAE
Trigger: TTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGG...CTGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACAACAAACTGGTCCTCTaGTTCCATCTGAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHNKLVL*FHLSGG
Trigger: GCCCCCACTCAGATGGAACCAGAGGACCAGTTTGTT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCTCTGCGCCAGCGTGGTGCTaGCCCTGCGTAGCTACCGAG +
Preference number: 4 (lower is better)
Translates to: TWLCRSIAPTLAKQERGSAPAWC*PCVATE
Trigger: CTCGGTAGCTACGCAGGGCCAGCACCACGCTGGCGC...AGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGTACGGCGCCAGCGTaGTGCTGGCCCTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: TGIGVYLHVALQINSTDTCTAPA*CWPCVA
Trigger: AGCTACGCAGGGCCAGCACCACGCTGGCGCCGTACA...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCGGATGGACTGCCAGCTaGCAGGCACCGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: STWLCRSIAPTLAKQERGGWTAS*QAPTEQ
Trigger: CTGCTCCGTCGGTGCCTGCCAGCTGGCAGTCCATCC...GCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGTGGGGGTCCTCACCATaGGTGTTTTACTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TELEQVRQLDQQYTILRSWGSSP*VFYSKE
Trigger: CTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCA...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGCCCCTGATATACGGTaGCGTGGCTGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRRPSPRRTPKKDLGPLSAPDIR*RGCFSG
Trigger: CCCAGAGAAACAGCCACGCCACCGTATATCAGGGGC...TGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAGATTGAGGTTGCAGTaGGCCGTGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRRLRLQ*AVIVPL
Trigger: CAGTGGCACAATCACGGCTCACTGCAACCTCAATCT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR TCA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATGTTAGCTCCCTCAGCTaGTTCCGCCCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQEDLQSVGLLASSASCHVSSLS*FRPQCS
Trigger: GCTGCACTGTGGGCGGAATCAGCTGAGGGAGCTAAC...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTGTGAGTGCATTATGCTaGAGATCCAGCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIVSALC*RSSTSR
Trigger: CCTCGAGGTGCTGGATCTTCAGCATAATGCACTCAC...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCTTGATAGTGGTGGTTaGAGCAAATCCCACAGGACC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHLDSGG*SKSHRT
Trigger: GGTCCTGTGGGATTTGCTTCAACCACCACTATCAAG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTGGACATCTCACTGCTaGACTCAGAGGCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIWTSHC*TQRQSH
Trigger: GTGGGATTGCCTCTGAGTTCAGCAGTGAGATGTCCA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGATTAACTTGCCTTCATaGTTGGGAGTCGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLINLPS*LGVGKP
Trigger: AGGCTTTCCGACTCCCAATCATGAAGGCAAGTTAAT...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGAACGGTTGCTTTCATTTaGGCCTCCCCACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: RQWATAQALVFTSTWLCRTVAFI*ASPHPC
Trigger: ACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGT...TCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGGCCTCCTCTGGGTCCTaGTCCAGGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: FMLIPEHHGNGRRPSPRRASSGS*SRLKTL
Trigger: TAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGC...CCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTAGGCCCCCAGCATTATaGTCATCAGAAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIRPPAL*SSEAVD
Trigger: GTCCACTGCTTCTGATGAGCATAATGCTGGGGGCCT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAACTCCATCCTGTCCTTaGTCATTGGCAGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRTPSCP*SLAGAC
Trigger: GCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTCGATAACAGCCAGCTaGTCCCTTATGGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSITAS*SLMEVS
Trigger: AGAGACCTCCATAAGGGAGCAGCTGGCTGTTATCGA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTGAACACCACGGCGCCAGCGTGGTaGTGGCCCTGCGTAGCTACC +
Preference number: 4 (lower is better)
Translates to: VVLLSVHLYFSSCSSLNTTAPAW*WPCVAT
Trigger: GGTAGCTACGCAGGGCCAGCACCACGCTGGCGCCGT...GGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TATACGGTGGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTCCTGTTGGCTTCCTCTaGCTCGTGCCATTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YTVAWLFLWVWGSSPWVFPVGFL*LVPFVG
Trigger: ACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGG...AAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTACGGTACTGATTCGCTaGGACACCACCTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTITVLIR*DTTLDA
Trigger: AGCATCCAAGGTGGTGTCCCAGCGAATCAGTACCGT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGAGCAGGCTGGGTACTaGATAGACGTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPREQAGY*IDVHCC
Trigger: ACAGCAGTGAACGTCTATCCAGTACCCAGCCTGCTC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAAATCCCACAGGACCTaGGAGGGTGAGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRKSHRT*EGEPIH
Trigger: ATGAATGGGCTCACCCTCCCAGGTCCTGTGGGATTT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTAAATCCCACAGGACCTaGGAGGGTGAGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIKSHRT*EGEPIH
Trigger: ATGAATGGGCTCACCCTCCCAGGTCCTGTGGGATTT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGTCCGATCCTCTTCATaGGGCTCAGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLVRSSS*GSGSSR
Trigger: CCGGCTCGAGCCTGAGCCCCATGAAGAGGATCGGAC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAAAGCAGTGTCAGCCTTaGGCCCCCGCTCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKKQCQP*APAPRP
Trigger: AGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTCTGCCACACCCAACTaGCTCCATCTCCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTISATPN*LHLLEN
Trigger: GTTTTCCAGGAGATGGAGCCAGTTGGGTGTGGCAGA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGAGAAGGTGAGCCTGTaGCTTCCAAGTACCGGCTTT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPREKVSL*LPSTGF
Trigger: AAAGCCGGTACTTGGAAGCCACAGGCTCACCTTCTC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTGAACACCGCGCCAGCGTGGTGCTaGCCCTGCGTAGCTACCGAG +
Preference number: 4 (lower is better)
Translates to: VVLLSVHLYFSSCSSLNTAPAWC*PCVATE
Trigger: CTCGGTAGCTACGCAGGGCCAGCACCACGCTGGCGC...GGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGTGTACGGCGCCAGCGTaGTGCTGGCCCTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: YLHVALQINSTDTCKTRECTAPA*CWPCVA
Trigger: AGCTACGCAGGGCCAGCACCACGCTGGCGCCGTACA...CTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTGTCTGGCAGCCTCGTaGGTGCATTATGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTICLAAS*VHYAED
Trigger: ATCTTCAGCATAATGCACTCACGAGGCTGCCAGACA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACATCAGCAACTCATCTTaGATGGTCAGCGGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHISNSS*MVSGVE
Trigger: TTCCACTCCGCTGACCATTCAAGATGAGTTGCTGAT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACGTGACGTACAGCATTaGCAGCTTCTGTGTAGGACA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRRDVQH*QLLCRT
Trigger: TGTCCTACACAGAAGCTGTCAATGCTGTACGTCACG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCTTCTTCCAGGTCATaGGGCACAACAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSSSRS*GTTNWS
Trigger: GGACCAGTTTGTTGTGCCTCATGACCTGGAAGAAGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCTCTCTGCCTATGGATaGAGGTGCCGGGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCLSAYG*RCRAAS
Trigger: AGAGGCAGCCCGGCACCTTCATCCATAGGCAGAGAG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGCCCGGAAGTTACAGTaGTGCACCGGAATATCTGTG +
Preference number: 4 (lower is better)
Translates to: GRRPSPRRTPKKDLGPLSARKLQ*CTGISV
Trigger: CACAGATATTCCGGTGCATCACTGTAACTTCCGGGC...TGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCACAGCTTATTTCTCTaGCCTGCCATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIHSLFL*PAISAS
Trigger: ACTGGCTGAGATGGCAGGGCAGAGAAATAAGCTGTG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGACCTCGGCACAGGACTaGTTGGCACGTGCCAACATT +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQTSAQD*LARANI
Trigger: AATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGT...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTGTGTTGGGTGGAGGCTaGAGCGCCGCTCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRVLGGG*SAALAS
Trigger: CGAGGCCAGAGCGGCGCTGCAGCCTCCACCCAACAC...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCTGATACAGAACAGCTaGTTTCTTCCCAGTACCCCT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHLIQNS*FLPSTP
Trigger: AGGGGTACTGGGAAGAAAGCAGCTGTTCTGTATCAG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTCTCAATCTAGGAAGTaGTTACCCCAACTATGGGGC +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSQSRK*LPQLWG
Trigger: GCCCCATAGTTGGGGTAAGCACTTCCTAGATTGAGA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACTACCAGGACAGGTATaGACTGATCCGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRLPGQV*TDPSGD
Trigger: ATCTCCTGACGGATCAGTGCATACCTGTCCTGGTAG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTTCATTTGAGCCTCCCCACATCCCTGTGGGTGAAGATTGGCAGACTTAGCTTCCTCACCTGGATGGACTaGCAGCTGGCAGGCACCGAC +
Preference number: 4 (lower is better)
Translates to: FHLSLPTSLWVKIGRLSFLTWMD*QLAGTD
Trigger: GTCGGTGCCTGCCAGCTGGCAGTCCATCCAGGTGAG...GAAGCTAAGTCTGCCAATCTTCACCCACAGGGATGTGGGGAGGCTCAAATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTAATAGCACCGACACTTaGAAAACAAGAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVNSTDT*KTRERL
Trigger: GAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATT...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCCCGCAGATCCACGTaGGTGATGTGTTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSRRST*VMCLFP
Trigger: GGGAAATAAACACATCACCCACGTGGATCTGCGGGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGGTGCTCTACCAGTGTTaGAAGGTTTTGCACATGATT +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLVLYQC*KVLHMI
Trigger: AATCATGTGCAAAACCTTCCAACACTGGTAGAGCAC...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAACTGATCTGAAAACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGTTTAGAGAGGGGCACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GTDLKTSFEGTELEQVRQFREGH*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAA...CTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGTTTTCAGATCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTTAGAGAGGGGCACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQEDLQSVGLLASSASCHFREGH*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAA...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCCCACTGCTAGAGGATaGAGTGGCTGGCTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLPTARG*SGWLRG
Trigger: GCCCCTAAGCCAGCCACTCCATCCTCTAGCAGTGGG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCCCACTGCTAGAGGATaGAGTGGCTGGCTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCPTARG*SGWLRG
Trigger: GCCCCTAAGCCAGCCACTCCATCCTCTAGCAGTGGG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAACTTGCCTTCATGATTaGGAGTCGGAAAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRTCLHD*ESESLH
Trigger: GTGGAGGCTTTCCGACTCCCAATCATGAAGGCAAGT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTATTTCTCTTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCGCAAGGGTCTCACCTaGATGGACTGCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VFLFMLIPEHHGNGRRPSRKGLT*MDCQLA
Trigger: TGCCAGCTGGCAGTCCATCCAGGTGAGACCCTTGCG...AGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAAGAGAAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGGTGTTTACCTCCACGTaGCTCTGCAGATCAATAGCA +
Preference number: 4 (lower is better)
Translates to: TELEQVRQLDQQYTILRSVFTST*LCRSIA
Trigger: TGCTATTGATCTGCAGAGCCACGTGGAGGTAAACAC...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGCTACTGCACAGGCATTaGTGTTTACCTCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: AWLFLWVWGSSPWVFYSKLLHRH*CLPPRG
Trigger: GCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAG...CTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCATGGGGGTCCTCACCATaGGTGTTTTACTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRRPSPRRTPKKDLGPLSWGSSP*VFYSKE
Trigger: CTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCA...TGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGAACTGATCTGAAAACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGAGCAGGTTCGGCAGCTaGACCAGCAGTACACGATCC +
Preference number: 4 (lower is better)
Translates to: GTDLKTSFEGTELEQVRQSRFGS*TSSTRS
Trigger: GGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCT...CTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGTTTTCAGATCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGAACTGATCTGAAAACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGAGTCTGTTGGCCTGTTaGCTTCCTCTGCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: GTDLKTSFEGTELEQVRQSLLAC*LPLPRA
Trigger: GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACT...CTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGTTTTCAGATCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGCTCCCCACATCCCTGTaGGTGAAGATTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: FMLIPEHHGNGRRPSPRRLPTSL*VKIGRL
Trigger: AAGTCTGCCAATCTTCACCCACAGGGATGTGGGGAG...CCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 72 bp GGTGTTTTACTCCAAGGAGCCAAGAGTCGAACAATGTaGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GVLLQGAKSRTM*SGKWLLTEAAF
Trigger: GAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTCCTTGGAGTAAAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTCACGGGAACCTCTGTaGGAAGATTATAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSREPL*EDYSSH
Trigger: ATGTGAGCTATAATCTTCTCACAGAGGTTCCCGTGA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGGAAGGTTTTGCACATaGTTGTGTCCCAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRGRFCT*LCPSIS
Trigger: ACTGATGCTGGGACACAATCATGTGCAAAACCTTCC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCGGAAGGTTTTGCACATaGTTGTGTCCCAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: AKSRTMLSGKWLLTEAAFGRFCT*LCPSIS
Trigger: ACTGATGCTGGGACACAATCATGTGCAAAACCTTCC...GAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTTTCTGGGAAAATGCTaGTGTTGTTGGAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVFLGKC*CCWSVQ
Trigger: TTGCACACTCCAACAACATCAGCATTTTCCCAGAAA...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAATGGGTCTTGTACGTaGCGTACAGCATTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRNGSCT*RTALTA
Trigger: AGCTGTCAATGCTGTACGTCACGTACAAGACCCATT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTGCTGCCATTGGTTATaGCCCCCTCAACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLCCHWL*PPQRAG
Trigger: ACCAGCCCGTTGAGGGGGTCATAACCAATGGCAGCA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCTCTATGAGAGGGGGTaGGTTCTCCAGATCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCLYERG*VLQIPP
Trigger: GGGAGGGATCTGGAGAACTCACCCCCTCTCATAGAG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGGGAGCTTTCACAGTCTaGCATCCAAAAGTTAAATCA +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLGAFTV*HPKVKS
Trigger: TGATTTAACTTTTGGATGTCAGACTGTGAAAGCTCC...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTGGAACAAGTCTAACCTaGGTGCTCCATCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIGTSLT*VLHPSV
Trigger: AACAGATGGATGGAGCACTCAGGTTAGACTTGTTCC...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATTTGCTTGTCTTCTCGTaGTCATGTACGGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GLLASSASCHLWVPFSPNLLVFS*SCTAPA
Trigger: CGCTGGCGCCGTACATGATCACGAGAAGACAAGCAA...ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGATGGCTTGGCCAAGATaGCAAGGCAGTAAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: AGDPLPEGHLRRIWGLCQMAWPR*QGSKKR
Trigger: CCGCTTTTTACTGCCTTGTCATCTTGGCCAAGCCAT...CTGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp AATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGCCACATCCCTGTGGGTaGAGATTGGCAGACTTAGCT +
Preference number: 4 (lower is better)
Translates to: NGRRPSPRRTPKKDLGPLPHPCG*RLADLA
Trigger: AGCTAAGTCTGCCAATCTTCACCCACAGGGATGTGG...CAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCCGGGTCTTTCTAACTaGATGAAGTTGTGTCGCAAG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIPGLSN*MKLCRK
Trigger: CTTGCGACACAACTTCATGCAGTTAGAAAGACCCGG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCGGGTCTTTCTAACTaGATGAAGTTGTGTCGCAAG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRPGLSN*MKLCRK
Trigger: CTTGCGACACAACTTCATGCAGTTAGAAAGACCCGG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATGGATAGACGTTCACTaGTGTCAGCCTGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRWIDVH*CQPVGT
Trigger: AGTTCCAACAGGCTGACAGCAGTGAACGTCTATCCA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATACCTCGAGGGGGATGTaGTCTACCAGTGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLLASSASCHLWVPFSPNTSRGM*STSVGR
Trigger: CCTTCCAACACTGGTAGAGCACATCCCCCTCGAGGT...ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp GGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCACACAGCTTATTTCTCTaGCCTGCCATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GRRPSPRRTPKKDLGPLSHSLFL*PAISAS
Trigger: ACTGGCTGAGATGGCAGGGCAGAGAAATAAGCTGTG...TGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGAGGACTGCTTGGCACGTaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: VAVSLGLGVLTMGVLLQGGLLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCC...TCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAGAGAGAGGCTCTATaGCCGCAAGGGTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GIGVYLHVALQINSTDTCKREAL*PQGSHL
Trigger: CAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTT...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGACCTCCACGTGGCTCTaGAGATCAATAGCACCGACA +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQTSTWL*RSIAPT
Trigger: TGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGT...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCGCTGGGACACCACCTTaGATGCTTGCCGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCAGTPP*MLAVAI
Trigger: GATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGC...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCGTGCTCTACCAGTGTTaGAAGGTTTTGCACATGATT +
Preference number: 4 (lower is better)
Translates to: GTELEQVRQLDQQYTILRVLYQC*KVLHMI
Trigger: AATCATGTGCAAAACCTTCCAACACTGGTAGAGCAC...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp GACACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATGGCTAAAGCTACTTGCTaGATCGGCAGTGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DTCKTRERLYARKGLTWMAKATC*IGSVRA
Trigger: CGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGC...CATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLPLSLL*VLLQAE
Trigger: TTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCCCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: STWLCRSIAPTLAKQERGPLSLL*VLLQAE
Trigger: TTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGG...GCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACGCAACTCATCTTGAATaGTCAGCGGAGTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHATHLE*SAEWKI
Trigger: TATCTTCCACTCCGCTGACCATTCAAGATGAGTTGC...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCACCCCCTCAACGGGCTaGTCATCATCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCTPSTG*SSSLSR
Trigger: CCTGGACAGTGATGATGACCAGCCCGTTGAGGGGGT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCACTCCCCCTGCAGCAGTaGATGTCTACTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPALPLQQ*MSTSTS
Trigger: AGAGGTGGAAGTAGACATCCACTGCTGCAGGGGGAG...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCTTCCCAGTACCCCTaGGAATTCCAATGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSSQYP*EFQCRL
Trigger: TAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGGGGAACACATCCTCTaGGTAAAGTACTCGGAAGTA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRGEHIL*VKYSEV
Trigger: TACTTCCGAGTACTTTACCCAGAGGATGTGTTCCCC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATGTACTCTGCCCACCTaGGGAACACATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPACTLPT*GTHPLG
Trigger: ACCCAGAGGATGTGTTCCCCAGGTGGGCAGAGTACA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCGTCAGGAGATTGTTaGTCAGATAAAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRPSGDC*SDKAAA
Trigger: TGCAGCTGCTTTATCTGACCAACAATCTCCTGACGG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCGGAATATCTGTGGTCTaGAACTCTTTGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: GTELEQVRQLDQQYTILRGISVV*NSLRSS
Trigger: GGAAGATCTCAAAGAGTTCCAGACCACAGATATTCC...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 72 bp GACCTCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTaGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: DLGQEDLQSVGL*ASSASCHLWVP
Trigger: AGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTAGAGATCCACGGTACTaGTTCGCTGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLRDPRY*FAGTPP
Trigger: AGGTGGTGTCCCAGCGAATCAGTACCGTGGATCTCT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTCAAGACAGAGGGTTTaGAGATTTAGCAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSRQRV*RFSRLP
Trigger: TGGCAATCTGCTAAATCTTCAAACCCTCTGTCTTGA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGTTAGCTCCCTCAGCTaGTTCCGCCCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKVSSLS*FRPQCS
Trigger: GCTGCACTGTGGGCGGAATCAGCTGAGGGAGCTAAC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTGTGAGTGCATTATGCTaGAGATCCAGCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFVSALC*RSSTSR
Trigger: CCTCGAGGTGCTGGATCTTCAGCATAATGCACTCAC...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp GGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGAGCCAAGAGTCGAACATGTCTGGCAGCCTCGTaGGTGCATTATGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GLGVLTMGVLLQGAKSRTCLAAS*VHYAED
Trigger: ATCTTCAGCATAATGCACTCACGAGGCTGCCAGACA...TGTTCGACTCTTGGCTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACATCCATAGCAAGTGCTaGGACACACAGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHIHSKC*DTQLIS
Trigger: AGAAATAAGCTGTGTGTCTCAGCACTTGCTATGGAT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGATTCCTAATTTCCTGTaGGATACCAAGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLIPNFL*DTKKVL
Trigger: TAACACCTTCTTGGTATCTCACAGGAAATTAGGAAT...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQWSFTL*ASSGSC
Trigger: GCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCA...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp TTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAATGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVFTSTWLCRSIAPTLAKWSFTL*ASSGSC
Trigger: GCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCA...TTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATGGACATCTCACTGCTaGACTCAGAGGCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPAWTSHC*TQRQSH
Trigger: GTGGGATTGCCTCTGAGTTCAGCAGTGAGATGTCCA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGGACAGAGGCTGCAGTaGCCCGAGACCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPGQRLQ*PETPPL
Trigger: CAATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTCCAGAGCCAGCCCCTaGTGGCTCTCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLSRASP*WLSHFL
Trigger: CAAAAAGTGTGAGAGCCATCAGGGGCTGGCTCTGGA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGGAAAGGTCTGTAACTaGTTGTTTGCAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRGKVCN*LFARCK
Trigger: CTTGCACCTTGCAAACAATCAGTTACAGACCTTTCC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTATTCCCCAACATTCTaGTCAAGTATCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHYSPTF*SSIPSF
Trigger: AAAGGAGGGGATACTTGAGCAGAATGTTGGGGAATA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAAAGCAAGGGAGTATTaGCGTCGCTTCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRKAREY*RRFTSS
Trigger: AGAAGAAGTGAAGCGACGGCAATACTCCCTTGCTTT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTACTTCTATCTTCTTTaGTTCACAGGCCCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIYFYLL*FTGPVR
Trigger: CCTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATACTTCTATCTTCTTTaGTTCACAGGCCCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRYFYLL*FTGPVR
Trigger: CCTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTGGCAGCCTCGTGAGTaGATTATGCTGAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQWQPRE*IMLKIQ
Trigger: CTGGATCTTCAGCATAATGCACTCACGAGGCTGCCA...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp TCCCACAGTATCACACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGTGGTCTCCATCAAACATaGCATACACAGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: SHSITRLLSFEPPHIPVGGLHQT*HTQLPP
Trigger: GGGTGGGAGCTGTGTATGGCATGTTTGATGGAGACC...ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPSAIVH*SRRGSS
Trigger: GGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSAIVH*SRRGSS
Trigger: GGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CCGACACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGACAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PTLAKQERGSMPARVSPGQAKAT*WIGSVR
Trigger: CCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTG...TCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GGAACTGATCTGAAAACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGGGACTGCTTGGCACGTaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: GTDLKTSFEGTELEQVRQGLLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCC...CTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGTTTTCAGATCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGCCTCCTCTGGGTCCTaGTCCAGGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLASSGS*SRLKTL
Trigger: TAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTGCCTCCTCTGGGTCCTaGTCCAGGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: DKKIFSLLACWLPLPRAIASSGS*SRLKTL
Trigger: TAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGC...AATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCAAGTGTTCCCACAATaGTTTGTTTCCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHQVFPQ*FVSQNQ
Trigger: CTGATTCTGGGAAACAAAGCATTGTGGGAACACTTG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAGATTCGCAGGTaGAGGTGCCCTACCAGGACA +
Preference number: 4 (lower is better)
Translates to: TGIGVYLHVALQINSTDTCKIRR*RCPTRT
Trigger: TGTCCTGGTAGGGCACCTGCACCTGCGAATCTTGCA...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGGCGTGGTGCTGGCCCTaGGTAGCTACCGAGAACAGA +
Preference number: 4 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQAWCWP*VATENR
Trigger: TCTGTTCTCGGTAGCTACGCAGGGCCAGCACCACGC...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GTATTTCTCTTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTAAGAGAGAGGCTCTATaGCCGCAAGGGTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: VFLFMLIPEHHGNGRRPSKREAL*PQGSHL
Trigger: CAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTT...AGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAAGAGAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTGCTTCCTCTGCCTCGTaGCATTTGTGGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFASSAS*HLWVPF
Trigger: GAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTCCTGTTGGCTTCCTCTaGCTCGTGCCATTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TGIGVYLHVALQINSTDTPVGFL*LVPFVG
Trigger: ACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGG...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTCAGCCTGTTGGAACTaGCATAGAGGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLSACWN*HRGSEG
Trigger: CCCTTCGGACCCTCTATGCCAGTTCCAACAGGCTGA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GACACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATGGAGCAGGCTGGGTACTaGATAGACGTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: DTCKTRERLYARKGLTWMEQAGY*IDVHCC
Trigger: ACAGCAGTGAACGTCTATCCAGTACCCAGCCTGCTC...CATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCAGAGCAGGCTGGGTACTaGATAGACGTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPAEQAGY*IDVHCC
Trigger: ACAGCAGTGAACGTCTATCCAGTACCCAGCCTGCTC...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTAGCAGGCAAAGCCTCTaGAATCAGGATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTISRQSL*NQDFCQ
Trigger: TTGACAGAAATCCTGATTCCAGAGGCTTTGCCTGCT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTGTCCGATCCTCTTCATaGGGCTCAGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRVRSSS*GSGSSR
Trigger: CCGGCTCGAGCCTGAGCCCCATGAAGAGGATCGGAC...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACAACCCCACACAGCTATaGTTTAGAAATGTAGACGCA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHNPTQL*FRNVDA
Trigger: TGCGTCTACATTTCTAAACCATAGCTGTGTGGGGTT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGATGTTGTCAGGGAAGTaGCTCCTCACGGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQMLSGK*LLTEAA
Trigger: GGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACAT...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TTTCATTTGAGCCTCCCCACATCCCTGTGGGTGAAGATTGGCAGACTTAGCTTCGCCCCTGATATACGGTaGCGTGGCTGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FHLSLPTSLWVKIGRLSFAPDIR*RGCFSG
Trigger: CCCAGAGAAACAGCCACGCCACCGTATATCAGGGGC...GAAGCTAAGTCTGCCAATCTTCACCCACAGGGATGTGGGGAGGCTCAAATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGCAGGTTCGGCAGCTaGACCAGCAGTACACGATCC +
Preference number: 4 (lower is better)
Translates to: YLHVALQINSTDTCKTRESRFGS*TSSTRS
Trigger: GGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCT...CTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGAGCCTCGTGCCATTTGTaGGTTCCTTTCAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SCSSLNTTGMAGDPLPEGASCHL*VPFSPN
Trigger: ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGC...TCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTTAGAAGGACTGAATaGCTTGGCCAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVALRRTE*LGQDDK
Trigger: CTTGTCATCTTGGCCAAGCCATTCAGTCCTTCTAAG...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCAAGACAGAGGGTTTaGAGATTTAGCAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSRQRV*RFSRLP
Trigger: TGGCAATCTGCTAAATCTTCAAACCCTCTGTCTTGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGTTAGCTCCCTCAGCTaGTTCCGCCCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAVSSLS*FRPQCS
Trigger: GCTGCACTGTGGGCGGAATCAGCTGAGGGAGCTAAC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATTTCTGGGAAAATGCTaGTGTTGTTGGAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRFLGKC*CCWSVQ
Trigger: TTGCACACTCCAACAACATCAGCATTTTCCCAGAAA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACTTTCTGGGAAAATGCTaGTGTTGTTGGAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TSFEGTELEQVRQLDQQYFLGKC*CCWSVQ
Trigger: TTGCACACTCCAACAACATCAGCATTTTCCCAGAAA...GTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRVGKGF*SIFRVV
Trigger: CACAACCCTGAAAATTGATCAGAAACCTTTGCCAAC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCAATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: PRVEQCCQGSGSSRRPPSMAPEG*RNCRIC
Trigger: ACAGATTCTACAGTTACGTCAACCTTCTGGAGCCAT...TGAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTATCCATAGCAAGTGCTaGGACACACAGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIIHSKC*DTQLIS
Trigger: AGAAATAAGCTGTGTGTCTCAGCACTTGCTATGGAT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTATCCATAGCAAGTGCTaGGACACACAGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVAIHSKC*DTQLIS
Trigger: AGAAATAAGCTGTGTGTCTCAGCACTTGCTATGGAT...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNWSFTL*ASSGSC
Trigger: GCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPWSFTL*ASSGSC
Trigger: GCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTTCACTGCTCACCTCTaGGGTGGACATCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLFTAHL*GGHLTA
Trigger: AGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGACAGGAGAATGGCTTaGACCCAGGGACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKDRRMA*TQGQRL
Trigger: CAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTGAACACCATCGTTCGAGGGCACTaGGCTAGAGCAGGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: VVLLSVHLYFSSCSSLNTIVRGH*ARAGSA
Trigger: TGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGAT...GGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp CGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGACAGCCTTTTACAGTTTaGTATGGTTGTGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: RQWATAQALVFTSTWLCRQPFTV*YGCGNG
Trigger: ACCATTCCCACAACCATAGCAAACTGTAAAAGGCTG...TCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTTTCTGTCAAGTCGTTaGAACTTAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: EAAFSLLAAVGYCTGIGVFLSSR*NLGLQT
Trigger: AGTTTGTAGACCTAAGTTGCAACGACTTGACAGAAA...AACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATCACAGCTTATTTCTCTaGCCTGCCATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLASSASCHLWVPFSPNHSLFL*PAISAS
Trigger: ACTGGCTGAGATGGCAGGGCAGAGAAATAAGCTGTG...ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAGCTCCCACCCCCTCTaGAAAGCTATCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: ALVFTSTWLCRSIAPTLASSHPL*KAIHSK
Trigger: CTTGCTATGGATAGCTTTGCAGAGGGGGTGGGAGCT...TGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGGACTGCTTGGCACGTaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLGLLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACAAGTGTTCCCACAATaGTTTGTTTCCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRQVFPQ*FVSQNQ
Trigger: CTGATTCTGGGAAACAAAGCATTGTGGGAACACTTG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCAAGTGTTCCCACAATaGTTTGTTTCCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIQVFPQ*FVSQNQ
Trigger: CTGATTCTGGGAAACAAAGCATTGTGGGAACACTTG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGTGTTGGGTGGAGGCTaGAGCGCCGCTCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQVLGGG*SAALAS
Trigger: CGAGGCCAGAGCGGCGCTGCAGCCTCCACCCAACAC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCCCTGGGAATTCCAATaGAGGTTAAATGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHPWEFQ*RLNVKL
Trigger: AAGTTTCACATTTAACCTGCATTGGAATTCCCAGGG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCAAGATCAACTGTACTCTaGCCACCTGGGGAACACATC +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPARSTVL*PPGEHI
Trigger: GATGTGTTCCCCAGGTGGGCAGAGTACAGTTGATCT...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACGACTCTATAGTGCACTaGAGCTTTATGTCATACCAA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHDSIVH*SFMSYQ
Trigger: TTGGTATGACATAAAGCTGCAGTGCACTATAGAGTC...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCTGGAAAGATTAACTTaGCTTCATGATTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTILERLT*LHDWES
Trigger: CGACTCCCAATCATGAAGGCAAGTTAATCTTTCCAG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGAGCCAAGAGTCGAACAAGCAGCAGCCACCTTTaGTTGTCTTCTCGTGATCAT +
Preference number: 4 (lower is better)
Translates to: GLGVLTMGVLLQGAKSRTSSSHL*LSSRDH
Trigger: ATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCT...TGTTCGACTCTTGGCTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTTCATTTGAGCCTCCCCACATCCCTGTGGGTGAAGATTGGCAGACTTAGCTTCGCGGCAGTGGGCTACTaGACAGGCATTGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: FHLSLPTSLWVKIGRLSFAAVGY*TGIGVY
Trigger: GTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGC...GAAGCTAAGTCTGCCAATCTTCACCCACAGGGATGTGGGGAGGCTCAAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp AAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGCGGCAGTGGGCTACTaGACAGGCATTGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: KKIFSLLACWLPLPRAICAAVGY*TGIGVY
Trigger: GTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGC...ACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTACGGTACTGATTCGCTaGGACACCACCTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLTVLIR*DTTLDA
Trigger: AGCATCCAAGGTGGTGTCCCAGCGAATCAGTACCGT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCTCCACATGCTTGATATaGTTCATCCTATTCAGCACC +
Preference number: 4 (lower is better)
Translates to: AKSRTMLSGKWLLTEAAFSTCLI*FILFST
Trigger: GGTGCTGAATAGGATGAACCATATCAAGCATGTGGA...GAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTCCACATGCTTGATATaGTTCATCCTATTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTISTCLI*FILFST
Trigger: GGTGCTGAATAGGATGAACCATATCAAGCATGTGGA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TCCCACAGTATCACACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGTTCCCGCAGATCCACGTaGGTGATGTGTTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: SHSITRLLSFEPPHIPVGSRRST*VMCLFP
Trigger: GGGAAATAAACACATCACCCACGTGGATCTGCGGGA...ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp AAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTTCAGCCTGTTGGAACTaGCATAGAGGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: KKIFSLLACWLPLPRAICSACWN*HRGSEG
Trigger: CCCTTCGGACCCTCTATGCCAGTTCCAACAGGCTGA...ACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp ACTGAATGGCTTGGCCAAGATGACAAGGCAGTAAAAAGCGGGGACTTGAACCTGCTGCTGTCAGCCTGTTaGAACTGGCATAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TEWLGQDDKAVKSGDLNLLLSAC*NWHRGS
Trigger: GGACCCTCTATGCCAGTTCCAACAGGCTGACAGCAG...CAGGTTCAAGTCCCCGCTTTTTACTGCCTTGTCATCTTGGCCAAGCCATTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp TACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGGGAGAAGAGGGTGTCTaGCAGCCTCGTGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: YLHVALQINSTDTCKTREGEEGV*QPRECI
Trigger: AATGCACTCACGAGGCTGCCAGACACCCTCTTCTCC...CTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp GTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAACGGCACAGGACTGCTTaGCACGTGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: VFTSTWLCRSIAPTLAKQRHRTA*HVPTLA
Trigger: AGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCG...TTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATTTAGAGAGGGGCACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKFREGH*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGCCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMPLSLL*VLLQAE
Trigger: TTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGG...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCGGAGTGGAAGATATGTaGGGCTTGGGGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCGVEDM*GLGRIQ
Trigger: TTGGATCCTCCCCAAGCCCCACATATCTTCCACTCC...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGCTGCAGCGCCGCTCTaGCCTCGGAAGCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNAAAPL*PRKQGS
Trigger: ACTGCCTTGCTTCCGAGGCCAGAGCGGCGCTGCAGC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTAACAAACTGGTCCTCTaGTTCCATCTGAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLNKLVL*FHLSGG
Trigger: GCCCCCACTCAGATGGAACCAGAGGACCAGTTTGTT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGCCACACTGTGCCCAGTaGGGCAGTCATAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMPHCAQ*GSHSAV
Trigger: CACAGCACTATGACTGCCCCACTGGGCACAGTGTGG...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCGTAATCACAGCACTTTaGGAGGCAGAGGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCVITAL*EAEEGG
Trigger: TCCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTAC...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGGCTCTCACACTTTTTaGCTCCGAGTTCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLGSHTF*LRVQPH
Trigger: GTGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACCACGCTGCTCCTGCTaGCTCTTCCGTACACCAGTA +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKPRCSC*LFRTPV
Trigger: TACTGGTGTACGGAAGAGCCAGCAGGAGCAGCGTGG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCCTGCAGGTGCTTTTaGTTAAGAACCCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: RQWATAQALVFTSTWLCRSCRCF*LRTQFS
Trigger: AGAGAATTGGGTTCTTAACCAAAAGCACCTGCAGGA...TCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR CCA 90 bp GAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATGTGTTTACCTCCACGTaGCTCTGCAGATCAATAGCA +
Preference number: 4 (lower is better)
Translates to: EHHGNGRRPSPRRTPKKDVFTST*LCRSIA
Trigger: TGCTATTGATCTGCAGAGCCACGTGGAGGTAAACAC...ATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGGCCTCGTGCCATTTGTaGGTTCCTTTCAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQASCHL*VPFSPN
Trigger: ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGC...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTAGATCTTCAGTCTGTTaGCCTGTTGGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFRSSVC*PVGFLC
Trigger: GCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCT...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TATACGGTGGCGTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTCTTAGAAGGACTGAATaGCTTGGCCAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: YTVAWLFLWVWGSSPWVFLRRTE*LGQDDK
Trigger: CTTGTCATCTTGGCCAAGCCATTCAGTCCTTCTAAG...AAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCACGCCACCGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp TCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGATCAAGACAGAGGGTTTaGAGATTTAGCAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: SCSSLNTTGMAGDPLPEGSRQRV*RFSRLP
Trigger: TGGCAATCTGCTAAATCTTCAAACCCTCTGTCTTGA...TCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp GTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGAATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: VAVSLGLGVLTMGVLLQGMAPEG*RNCRIC
Trigger: ACAGATTCTACAGTTACGTCAACCTTCTGGAGCCAT...TCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp TTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGATCCATAGCAAGTGCTaGGACACACAGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: FMLIPEHHGNGRRPSPRRIHSKC*DTQLIS
Trigger: AGAAATAAGCTGTGTGTCTCAGCACTTGCTATGGAT...CCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCGTGACGTACAGCATTaGCAGCTTCTGTGTAGGACA +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCRDVQH*QLLCRT
Trigger: TGTCCTACACAGAAGCTGTCAATGCTGTACGTCACG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCTTGATAGTGGTGGTTaGAGCAAATCCCACAGGACC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLLDSGG*SKSHRT
Trigger: GGTCCTGTGGGATTTGCTTCAACCACCACTATCAAG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTGCTGCCATTGGTTATaGCCCCCTCAACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPCCHWL*PPQRAG
Trigger: ACCAGCCCGTTGAGGGGGTCATAACCAATGGCAGCA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTGCTGCCATTGGTTATaGCCCCCTCAACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNCCHWL*PPQRAG
Trigger: ACCAGCCCGTTGAGGGGGTCATAACCAATGGCAGCA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACAAGAAGAGCATCATTTaGTATTCAGTAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHKKSII*YSVDLP
Trigger: TGGCAGATCTACTGAATATCAAATGATGCTCTTCTT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGGCCCGGAAGTTACAGTaGTGCACCGGAATATCTGTG +
Preference number: 4 (lower is better)
Translates to: YLHVALQINSTDTCKTREARKLQ*CTGISV
Trigger: CACAGATATTCCGGTGCATCACTGTAACTTCCGGGC...CTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp CAGAAGCGCTACAAAGGCAGCCGAGAACAGCCCGGAAGTTACAGTGATGCACCGTCCTCTTGTAGGAACTaGTCTGAAAACATCGTTCGA +
Preference number: 4 (lower is better)
Translates to: QKRYKGSREQPGSYSDAPSSCRN*SENIVR
Trigger: TCGAACGATGTTTTCAGATCAGTTCCTACAAGAGGA...CGGTGCATCACTGTAACTTCCGGGCTGTTCTCGGCTGCCTTTGTAGCGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR TCA 90 bp GCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCTCCTCTTGTAGGAACTaGTCTGAAAACATCGTTCGA +
Preference number: 4 (lower is better)
Translates to: AVGYCTGIGVYLHVALQISSCRN*SENIVR
Trigger: TCGAACGATGTTTTCAGATCAGTTCCTACAAGAGGA...GATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp CTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTTGTCTTCTCGTGATCATGGTAACAAATAAAAGCTaGCCTCGGACAAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: LAGTDGAAATFACLLVIMVTNKS*PRTRRS
Trigger: AGATCTTCTTGTCCGAGGTCAGCTTTTATTTGTTAC...CATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR TCA 90 bp GACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTATGGCTTGGCCAAGATaGCAAGGCAGTAAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: DKKIFSLLACWLPLPRAIMAWPR*QGSKKR
Trigger: CCGCTTTTTACTGCCTTGTCATCTTGGCCAAGCCAT...AATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTTGGATGCTTGCCGTTaGCATCGCTGGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRLDACR*HRWYSA
Trigger: GGCCGAGTACCAGCGATGGCAACGGCAAGCATCCAA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTGGACACCACCTTGGATaGTTGCCGTTGCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRGHHLG*LPLPSL
Trigger: CAGCGATGGCAACGGCAAGCATCCAAGGTGGTGTCC...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GACACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATGTGGATAGACGTTCACTaGTGTCAGCCTGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: DTCKTRERLYARKGLTWMWIDVH*CQPVGT
Trigger: AGTTCCAACAGGCTGACAGCAGTGAACGTCTATCCA...CATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTACTTCTATCTTCTTTaGTTCACAGGCCCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQYFYLL*FTGPVR
Trigger: CCTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTA...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTGGCAGCCTCGTGAGTaGATTATGCTGAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLWQPRE*IMLKIQ
Trigger: CTGGATCTTCAGCATAATGCACTCACGAGGCTGCCA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp AATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTGTGCAACAAGGGTGTaGAGCCTTTTACAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NGRRPSPRRTPKKDLGPLCATRV*SLLQFA
Trigger: AGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACA...CAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp ACTGAATGGCTTGGCCAAGATGACAAGGCAGTAAAAAGCGGGGACTTGAACCTGGGTCTCCATCAAACATaGCATACACAGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TEWLGQDDKAVKSGDLNLGLHQT*HTQLPP
Trigger: GGGTGGGAGCTGTGTATGGCATGTTTGATGGAGACC...CAGGTTCAAGTCCCCGCTTTTTACTGCCTTGTCATCTTGGCCAAGCCATTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRVSLVD*CTSSKS
Trigger: GCTTTTAGAAGAGGTACAGCAGTCAACTAATGACAC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIVSLVD*CTSSKS
Trigger: GCTTTTAGAAGAGGTACAGCAGTCAACTAATGACAC...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLQAKAT*WIGSVR
Trigger: CCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTGAACACCACCTCGGCACAGGACTaGTTGGCACGTGCCAACATT +
Preference number: 4 (lower is better)
Translates to: VVLLSVHLYFSSCSSLNTTSAQD*LARANI
Trigger: AATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGT...GGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACTTATCAGAGATGCGTaGGACCTTCTTAAGCAAATT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRLIRDA*DLLKQI
Trigger: AATTTGCTTAAGAAGGTCGCACGCATCTCTGATAAG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTAACTCTCCTCTCCAGTaGAGGCGGATGGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TGIGVYLHVALQINSTDTNSPLQ*RRMVKT
Trigger: AGTCTTTACCATCCGCCTGCACTGGAGAGGAGAGTT...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTAACTCTCCTCTCCAGTaGAGGCGGATGGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLNSPLQ*RRMVKT
Trigger: AGTCTTTACCATCCGCCTGCACTGGAGAGGAGAGTT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGATTCGCAGGTGCAGGTaGCCTACCAGGACAGGTATG +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMIRRCR*PTRTGM
Trigger: CATACCTGTCCTGGTAGGGCACCTGCACCTGCGAAT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAAATTCGCAGGTGCAGGTaGCCTACCAGGACAGGTATG +
Preference number: 4 (lower is better)
Translates to: LVFTSTWLCRSIAPTLAKIRRCR*PTRTGM
Trigger: CATACCTGTCCTGGTAGGGCACCTGCACCTGCGAAT...TTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp GGAACTGATCTGAAAACATCGTTCGAGGGCACTGAGCTAGAGCAGGTTCGGCAGAGCAGCAGCCACCTTTaGTTGTCTTCTCGTGATCAT +
Preference number: 4 (lower is better)
Translates to: GTDLKTSFEGTELEQVRQSSSHL*LSSRDH
Trigger: ATGATCACGAGAAGACAAGCAAAGGTGGCTGCTGCT...CTGCCGAACCTGCTCTAGCTCAGTGCCCTCGAACGATGTTTTCAGATCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp AAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGCTTCCTCTGCCTCGTaGCATTTGTGGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KKIFSLLACWLPLPRAICASSAS*HLWVPF
Trigger: GAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC...ACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGCTGGGACACCACCTTaGATGCTTGCCGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSAGTPP*MLAVAI
Trigger: GATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATTCAGGGTTGTGATATaGCTAAATATGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRFRVVI*LNMSSV
Trigger: GACACTGGACATATTTAGCCATATCACAACCCTGAA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTTCAGGGTTGTGATATaGCTAAATATGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIFRVVI*LNMSSV
Trigger: GACACTGGACATATTTAGCCATATCACAACCCTGAA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGAGGAGCCCAACTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLEEPNF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGTTGGGCTCCTC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAGAGGAGCCCAACTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: ALVFTSTWLCRSIAPTLAEEPNF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGTTGGGCTCCTC...TGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSPLSLL*VLLQAE
Trigger: TTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGG...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTAAGATATGTGGGGCTTaGGGAGGATCCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLKICGA*GGSKGR
Trigger: TCTACCCTTGGATCCTCCCCAAGCCCCACATATCTT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATACCCCCTCAACGGGCTaGTCATCATCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNTPSTG*SSSLSR
Trigger: CCTGGACAGTGATGATGACCAGCCCGTTGAGGGGGT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATGTACTCTGCCCACCTaGGGAACACATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKCTLPT*GTHPLG
Trigger: ACCCAGAGGATGTGTTCCCCAGGTGGGCAGAGTACA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCCCACGCTGCTCCTGCTaGCTCTTCCGTACACCAGTA +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPPRCSC*LFRTPV
Trigger: TACTGGTGTACGGAAGAGCCAGCAGGAGCAGCGTGG...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATCCGTCAGGAGATTGTTaGTCAGATAAAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQEDLQSVGLLASSASCHPSGDC*SDKAAA
Trigger: TGCAGCTGCTTTATCTGACCAACAATCTCCTGACGG...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
3UTR CAA 72 bp GGGGACTTGAACCTGGTGGTCCTGCTCTCGGTTCATTaGTATTTCTCTTCATGCTCATCCCTGAACACCACG +
Preference number: 4 (lower is better)
Translates to: GDLNLVVLLSVH*YFSSCSSLNTT
Trigger: CGTGGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCACCAGGTTCAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTATCAGCAACTCATCTTaGATGGTCAGCGGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLISNSS*MVSGVE
Trigger: TTCCACTCCGCTGACCATTCAAGATGAGTTGCTGAT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATTCACTGCTCACCTCTaGGGTGGACATCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKFTAHL*GGHLTA
Trigger: AGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTAAGAAGAGCATCATTTaGTATTCAGTAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIKKSII*YSVDLP
Trigger: TGGCAGATCTACTGAATATCAAATGATGCTCTTCTT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAAGCCCACTGTCTGGATaGCATCCACTGGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIASPLSG*HPLATV
Trigger: CACTGTTGCCAGTGGATGTCATCCAGACAGTGGGCT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATAGCCCACTGTCTGGATaGCATCCACTGGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSPLSG*HPLATV
Trigger: CACTGTTGCCAGTGGATGTCATCCAGACAGTGGGCT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCAAAACCGTAAGATATaGGCCCACTGTCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLQNRKI*AHCLDD
Trigger: GTCATCCAGACAGTGGGCTCATATCTTACGGTTTTG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACCACATCCCTGTGGGTaGAGATTGGCAGACTTAGCT +
Preference number: 4 (lower is better)
Translates to: LVFTSTWLCRSIAPTLAKPHPCG*RLADLA
Trigger: AGCTAAGTCTGCCAATCTTCACCCACAGGGATGTGG...TTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCACCACCTTGGATGCTTaGCGTTGCCATCGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPTTLDA*RCHRWY
Trigger: GTACCAGCGATGGCAACGGCAAGCATCCAAGGTGGT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCCGGGTCTTTCTAACTaGATGAAGTTGTGTCGCAAG +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCPGLSN*MKLCRK
Trigger: CTTGCGACACAACTTCATGCAGTTAGAAAGACCCGG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTGGATAGACGTTCACTaGTGTCAGCCTGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLWIDVH*CQPVGT
Trigger: AGTTCCAACAGGCTGACAGCAGTGAACGTCTATCCA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAACCTCGAGGGGGATGTaGTCTACCAGTGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSTSRGM*STSVGR
Trigger: CCTTCCAACACTGGTAGAGCACATCCCCCTCGAGGT...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp AATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGCAGCCTTTTACAGTTTaGTATGGTTGTGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: NGRRPSPRRTPKKDLGPLQPFTV*YGCGNG
Trigger: ACCATTCCCACAACCATAGCAAACTGTAAAAGGCTG...CAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTGTGCAACAAGGGTGTaGAGCCTTTTACAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GQEDLQSVGLLASSASCHCATRV*SLLQFA
Trigger: AGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACA...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp CGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATTTCTGTCAAGTCGTTaGAACTTAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: RQWATAQALVFTSTWLCRFLSSR*NLGLQT
Trigger: AGTTTGTAGACCTAAGTTGCAACGACTTGACAGAAA...TCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAGCTCCCACCCCCTCTaGAAAGCTATCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMSSHPL*KAIHSK
Trigger: CTTGCTATGGATAGCTTTGCAGAGGGGGTGGGAGCT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGAGCTCCCACCCCCTCTaGAAAGCTATCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQSSHPL*KAIHSK
Trigger: CTTGCTATGGATAGCTTTGCAGAGGGGGTGGGAGCT...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGGTCTCCATCAAACATaGCATACACAGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMGLHQT*HTQLPP
Trigger: GGGTGGGAGCTGTGTATGGCATGTTTGATGGAGACC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTGGACCCCACTTCACTaGTCACCTCTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRWTPLH*SPLRWT
Trigger: TGTCCACCTCAGAGGTGAGCAGTGAAGTGGGGTCCA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAGGCCCCCAGCATTATaGTCATCAGAAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMRPPAL*SSEAVD
Trigger: GTCCACTGCTTCTGATGAGCATAATGCTGGGGGCCT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGTGTTGGGTGGAGGCTaGAGCGCCGCTCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIVLGGG*SAALAS
Trigger: CGAGGCCAGAGCGGCGCTGCAGCCTCCACCCAACAC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACCAGATCCCTCCCCCTaGAGCAGTGGATGTCTACTT +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSPDPSP*SSGCLL
Trigger: AAGTAGACATCCACTGCTGCAGGGGGAGGGATCTGG...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTCCAGATCCCTCCCCCTaGAGCAGTGGATGTCTACTT +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRPDPSP*SSGCLL
Trigger: AAGTAGACATCCACTGCTGCAGGGGGAGGGATCTGG...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAACTCCATCCTGTCCTTaGTCATTGGCAGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKTPSCP*SLAGAC
Trigger: GCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACAGCATCTGGGAGAAGTaGATGAAATTTAGAATACAA +
Preference number: 4 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHSIWEK*MKFRIQ
Trigger: TTGTATTCTAAATTTCATGCACTTCTCCCAGATGCT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCATTCGCAGGTGCAGGTaGCCTACCAGGACAGGTATG +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPIRRCR*PTRTGM
Trigger: CATACCTGTCCTGGTAGGGCACCTGCACCTGCGAAT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR GCA 90 bp TCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCGGAAAATCCTGCAGGTaGTTTTGGTTAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: SDKKIFSLLACWLPLPRAGKSCR*FWLRTQ
Trigger: TTGGGTTCTTAACCAAAAGCACCTGCAGGATTTTCC...GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR GCA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTAATAGCACCGACACTTaGAAAACAAGAGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFNSTDT*KTRERL
Trigger: GAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATT...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGAGCAGGCTGGGTACTaGATAGACGTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMEQAGY*IDVHCC
Trigger: ACAGCAGTGAACGTCTATCCAGTACCCAGCCTGCTC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGGAGAAGAGGGTGTCTaGCAGCCTCGTGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNGEEGV*QPRECI
Trigger: AATGCACTCACGAGGCTGCCAGACACCCTCTTCTCC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATAGCAGGCAAAGCCTCTaGAATCAGGATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GQEDLQSVGLLASSASCHSRQSL*NQDFCQ
Trigger: TTGACAGAAATCCTGATTCCAGAGGCTTTGCCTGCT...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp GGGGACTTGAACCTGGTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCGAGGAGCCCAACTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: GDLNLVVLLSVHLYFSSCEEPNF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGTTGGGCTCCTC...GCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCACCAGGTTCAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGCTAAAGCTACTTGCTaGATCGGCAGTGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNAKATC*IGSVRA
Trigger: CGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGGAGTGGAAGATATGTaGGGCTTGGGGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMGVEDM*GLGRIQ
Trigger: TTGGATCCTCCCCAAGCCCCACATATCTTCCACTCC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAAAATCCCACAGGACCTaGGAGGGTGAGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKKSHRT*EGEPIH
Trigger: ATGAATGGGCTCACCCTCCCAGGTCCTGTGGGATTT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGCTGCAGCGCCGCTCTaGCCTCGGAAGCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTAAAPL*PRKQGS
Trigger: ACTGCCTTGCTTCCGAGGCCAGAGCGGCGCTGCAGC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATCTCCCCCTGCAGCAGTaGATGTCTACTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNLPLQQ*MSTSTS
Trigger: AGAGGTGGAAGTAGACATCCACTGCTGCAGGGGGAG...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCCTCCCCCTGCAGCAGTaGATGTCTACTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPLPLQQ*MSTSTS
Trigger: AGAGGTGGAAGTAGACATCCACTGCTGCAGGGGGAG...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAACAAACTGGTCCTCTaGTTCCATCTGAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMNKLVL*FHLSGG
Trigger: GCCCCCACTCAGATGGAACCAGAGGACCAGTTTGTT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTGAGACAGGAGAATaGCTTGAACCCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMAETGE*LEPRDR
Trigger: TCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGTAATCACAGCACTTTaGGAGGCAGAGGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMVITAL*EAEEGG
Trigger: TCCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTAC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTTCTCTCTCTGCCTATaGATGAAGGTGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRFSLCL*MKVPGC
Trigger: GCAGCCCGGCACCTTCATCCATAGGCAGAGAGAGAA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAAGCAGTGTCAGCCTTaGGCCCCCGCTCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIKQCQP*APAPRP
Trigger: AGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCTCCATCTGTTCTCATTaGCCTCAGTCCGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCSICSH*PQSVSE
Trigger: CTCTGAAACGGACTGAGGCCAATGAGAACAGATGGA...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTACACAGAACAACATTTaGAATTACAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTITQNNI*NYRVLL
Trigger: CAGCAGAACTCTGTAATTCCAAATGTTGTTCTGTGT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAACACAGAACAACATTTaGAATTACAGAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRTQNNI*NYRVLL
Trigger: CAGCAGAACTCTGTAATTCCAAATGTTGTTCTGTGT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGGTAAGAGGACTGCTTaGGGCCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPGKRTA*GQEFKT
Trigger: AGTCTTGAACTCCTGGCCTCAAGCAGTCCTCTTACC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTGGACATCTCACTGCTaGACTCAGAGGCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPWTSHC*TQRQSH
Trigger: GTGGGATTGCCTCTGAGTTCAGCAGTGAGATGTCCA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTCTGTGGCCACTTCAATaGGGTTCAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRLWPLQ*GSGCPL
Trigger: TAGAGGACAGCCTGAACCTCATTGAAGTGGCCACAG...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATCTTCTTCCAGGTCATaGGGCACAACAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKSSSRS*GTTNWS
Trigger: GGACCAGTTTGTTGTGCCTCATGACCTGGAAGAAGA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCACACCCCATTAGTCTaGGATAAGGTGATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLHTPLV*DKVISL
Trigger: CAGAGAAATCACCTTATCTCAGACTAATGGGGTGTG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGTACACACAGAGACCTaGGAATATGCAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKVHTET*EYAEAR
Trigger: TCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTAC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATTATGTGTGACTGACTaGTCACCAAATGAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPALCVTD*SPNEAN
Trigger: GTTTGCCTCATTTGGTGATCAGTCAGTCACACATAA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAGGACAGGTATGCACTaGTCCGTCAGGAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMRTGMH*SVRRLL
Trigger: CAACAATCTCCTGACGGATCAGTGCATACCTGTCCT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCGGAAAGGTCTGTAACTaGTTGTTTGCAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: STWLCRSIAPTLAKQERGGKVCN*LFARCK
Trigger: CTTGCACCTTGCAAACAATCAGTTACAGACCTTTCC...GCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTTGGATGCTTGCCGTTaGCATCGCTGGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNLDACR*HRWYSA
Trigger: GGCCGAGTACCAGCGATGGCAACGGCAAGCATCCAA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGGACACCACCTTGGATaGTTGCCGTTGCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNGHHLG*LPLPSL
Trigger: CAGCGATGGCAACGGCAAGCATCCAAGGTGGTGTCC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTACTTCTATCTTCTTTaGTTCACAGGCCCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLYFYLL*FTGPVR
Trigger: CCTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACACAGCTTATTTCTCTaGCCTGCCATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKHSLFL*PAISAS
Trigger: ACTGGCTGAGATGGCAGGGCAGAGAAATAAGCTGTG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGGTCTCCATCAAACATaGCATACACAGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNGLHQT*HTQLPP
Trigger: GGGTGGGAGCTGTGTATGGCATGTTTGATGGAGACC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGGTCTCCATCAAACATaGCATACACAGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSGLHQT*HTQLPP
Trigger: GGGTGGGAGCTGTGTATGGCATGTTTGATGGAGACC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQVSLVD*CTSSKS
Trigger: GCTTTTAGAAGAGGTACAGCAGTCAACTAATGACAC...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCAGGCCCCCAGCATTATaGTCATCAGAAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPRPPAL*SSEAVD
Trigger: GTCCACTGCTTCTGATGAGCATAATGCTGGGGGCCT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCACCCAGTTCTCTCTCTaGCTATGGATGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPTQFSL*LWMKVP
Trigger: CGGCACCTTCATCCATAGGCAGAGAGAGAACTGGGT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATTAAGGTCACGTGGATaGAAGCAGTGTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKLRSRG*KQCQPW
Trigger: CCAAGGCTGACACTGCTTGCATCCACGTGACCTTAA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCAGACTATTTGCAGATaGATTCAAGTATCTGAGATT +
Preference number: 4 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIQTICR*IQVSEI
Trigger: AATCTCAGATACTTGAATGCATCTGCAAATAGTCTG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACAGACTATTTGCAGATaGATTCAAGTATCTGAGATT +
Preference number: 4 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRQTICR*IQVSEI
Trigger: AATCTCAGATACTTGAATGCATCTGCAAATAGTCTG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAACTCTCCTCTCCAGTaGAGGCGGATGGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMNSPLQ*RRMVKT
Trigger: AGTCTTTACCATCCGCCTGCACTGGAGAGGAGAGTT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATCCCGCAGATCCACGTaGGTGATGTGTTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKSRRST*VMCLFP
Trigger: GGGAAATAAACACATCACCCACGTGGATCTGCGGGA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTTCAGGGTTGTGATATaGCTAAATATGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VCWPVGFLCLVPFVGSFQFRVVI*LNMSSV
Trigger: GACACTGGACATATTTAGCCATATCACAACCCTGAA...CTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGAGGAGCCCAACTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKEEPNF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGTTGGGCTCCTC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGGAGTGGAAGATATGTaGGGCTTGGGGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNGVEDM*GLGRIQ
Trigger: TTGGATCCTCCCCAAGCCCCACATATCTTCCACTCC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACCTGTCCTTGCTCATTaGCAGGAGCATGCCACTATT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKPVLAH*QEHATI
Trigger: AATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGCTGAGACAGGAGAATaGCTTGAACCCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPAETGE*LEPRDR
Trigger: TCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTGTAATCACAGCACTTTaGGAGGCAGAGGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRVITAL*EAEEGG
Trigger: TCCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTAC...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAAGATCTTCAGTCTGTTaGCCTGTTGGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFLCLVPFVGSFQSKYLSRSSVC*PVGFLC
Trigger: GCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCT...TGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 72 bp AGAGAAGGTGAGCCTGTGGCTTCCAAGTACCGGCTTTaGCTGAAGGTCTACATGGGAAGAAGAGCATCATTT +
Preference number: 4 (lower is better)
Translates to: REGEPVASKYRL*LKVYMGRRASF
Trigger: AAATGATGCTCTTCTTCCCATGTAGACCTTCAGCAAAAGCCGGTACTTGGAAGCCACAGGCTCACCTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACCAAAGTCTCGAAGCTaGCATGATAGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKPKSRS*HDRSEL
Trigger: AAGCTCAGACCTATCATGTCAGCTTCGAGACTTTGG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAGAGATCCACGGTACTaGTTCGCTGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNRDPRY*FAGTPP
Trigger: AGGTGGTGTCCCAGCGAATCAGTACCGTGGATCTCT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTGTCTGGCAGCCTCGTaGGTGCATTATGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPCLAAS*VHYAED
Trigger: ATCTTCAGCATAATGCACTCACGAGGCTGCCAGACA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: TGIGVYLHVALQINSTDTVGKGF*SIFRVV
Trigger: CACAACCCTGAAAATTGATCAGAAACCTTTGCCAAC...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATCGTGACGTACAGCATTaGCAGCTTCTGTGTAGGACA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNRDVQH*QLLCRT
Trigger: TGTCCTACACAGAAGCTGTCAATGCTGTACGTCACG...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATCTTGATAGTGGTGGTTaGAGCAAATCCCACAGGACC +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNLDSGG*SKSHRT
Trigger: GGTCCTGTGGGATTTGCTTCAACCACCACTATCAAG...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCAAGGAACTTATGTGTaGCTGACTGATCACCAAATG +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLQGTYV*LTDHQM
Trigger: CATTTGGTGATCAGTCAGTCACACATAAGTTCCTTG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATATTTGTCATATTGTCTaGGGCTTAGAAGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: EHHGNGRRPSPRRTPKKDICHIV*GLEGLN
Trigger: ATTCAGTCCTTCTAAGCCTCAGACAATATGACAAAT...ATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGGACACCACCTTGGATaGTTGCCGTTGCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQGHHLG*LPLPSL
Trigger: CAGCGATGGCAACGGCAAGCATCCAAGGTGGTGTCC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACACCTCGAGGGGGATGTaGTCTACCAGTGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNTSRGM*STSVGR
Trigger: CCTTCCAACACTGGTAGAGCACATCCCCCTCGAGGT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCAGCCTTTTACAGTTTaGTATGGTTGTGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLQPFTV*YGCGNG
Trigger: ACCATTCCCACAACCATAGCAAACTGTAAAAGGCTG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTCCCTACCCCAACCCTaGACAGCCTCCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTSLPQP*TASSHT
Trigger: AGTGTGGGAGGAGGCTGTGCAGGGTTGGGGTAGGGA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCAGATCAACTGTACTCTaGCCACCTGGGGAACACATC +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPRSTVL*PPGEHI
Trigger: GATGTGTTCCCCAGGTGGGCAGAGTACAGTTGATCT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATCTCAATCTAGGAAGTaGTTACCCCAACTATGGGGC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKSQSRK*LPQLWG
Trigger: GCCCCATAGTTGGGGTAAGCACTTCCTAGATTGAGA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTGCAAGATTCGCAGGTaGAGGTGCCCTACCAGGACA +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNCKIRR*RCPTRT
Trigger: TGTCCTGGTAGGGCACCTGCACCTGCGAATCTTGCA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTCCACATGCTTGATATaGTTCATCCTATTCAGCACC +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLSTCLI*FILFST
Trigger: GGTGCTGAATAGGATGAACCATATCAAGCATGTGGA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCATCCCGCAGATCCACGTaGGTGATGTGTTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSSRRST*VMCLFP
Trigger: GGGAAATAAACACATCACCCACGTGGATCTGCGGGA...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTCAGCCTGTTGGAACTaGCATAGAGGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSACWN*HRGSEG
Trigger: CCCTTCGGACCCTCTATGCCAGTTCCAACAGGCTGA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGTGCTCTACCAGTGTTaGAAGGTTTTGCACATGATT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLVLYQC*KVLHMI
Trigger: AATCATGTGCAAAACCTTCCAACACTGGTAGAGCAC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGTTTGTTTAAGGCCTTaGAGAAGAGGGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKVCLRP*RRGCLA
Trigger: TGCCAGACACCCTCTTCTCCAAGGCCTTAAACAAAC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCGGCACAGGACTGCTTaGCACGTGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQRHRTA*HVPTLA
Trigger: AGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAAGGCCGTTGTCAGACTaGTTACTGGAGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIARPLSD*LLEKVA
Trigger: TGCTACCTTCTCCAGTAACCAGTCTGACAACGGCCT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATAGGCCGTTGTCAGACTaGTTACTGGAGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNRPLSD*LLEKVA
Trigger: TGCTACCTTCTCCAGTAACCAGTCTGACAACGGCCT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATCTTCCCAGTACCCCTaGGAATTCCAATGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKSSQYP*EFQCRL
Trigger: TAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCAAGCACATTCCCCATTaGGTAAAATCAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCKHIPH*VKSSNA
Trigger: GGCATTGCTTGATTTTACCCAATGGGGAATGTGCTT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTGGAATATCTGTGGTCTaGAACTCTTTGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: TGIGVYLHVALQINSTDTGISVV*NSLRSS
Trigger: GGAAGATCTCAAAGAGTTCCAGACCACAGATATTCC...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGTTAGCTCCCTCAGCTaGTTCCGCCCACAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIVSSLS*FRPQCS
Trigger: GCTGCACTGTGGGCGGAATCAGCTGAGGGAGCTAAC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATCACGGGAACCTCTGTaGGAAGATTATAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKSREPL*EDYSSH
Trigger: ATGTGAGCTATAATCTTCTCACAGAGGTTCCCGTGA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGGAAGGTTTTGCACATaGTTGTGTCCCAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNGRFCT*LCPSIS
Trigger: ACTGATGCTGGGACACAATCATGTGCAAAACCTTCC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGGAAGGTTTTGCACATaGTTGTGTCCCAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAGRFCT*LCPSIS
Trigger: ACTGATGCTGGGACACAATCATGTGCAAAACCTTCC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCTCTGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: TWLCRSIAPTLAKQERGSVGKGF*SIFRVV
Trigger: CACAACCCTGAAAATTGATCAGAAACCTTTGCCAAC...AGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGGAACAAGTCTAACCTaGGTGCTCCATCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNGTSLT*VLHPSV
Trigger: AACAGATGGATGGAGCACTCAGGTTAGACTTGTTCC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAAAGAGTGTATCCCAATaGCACGTGCATATGAGCATG +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKKSVSQ*HVHMSM
Trigger: CATGCTCATATGCACGTGTCATTGGGATACACTCTT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTCACCTAAACTCTGTGTaGGCCACTATGTTCCCTACT +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRHLNSV*ATMFPT
Trigger: AGTAGGGAACATAGTGGCTCACACAGAGTTTAGGTG...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAGTACCGGCTTTTGCTaGAGGTCTACATGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRSTGFC*RSTWEE
Trigger: TTCTTCCCATGTAGACCTTCAGCAAAAGCCGGTACT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp GACACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGATGATTTGTCATATTGTCTaGGGCTTAGAAGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: DTCKTRERLYARKGLTWMICHIV*GLEGLN
Trigger: ATTCAGTCCTTCTAAGCCTCAGACAATATGACAAAT...CATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACTGGTGTCTCTACAGTaGAAAGGACGAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKLVSLQ*KGRDVS
Trigger: ACTTACATCTCGTCCTTTGCACTGTAGAGACACCAG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGCTGGTGTCTCTACAGTaGAAAGGACGAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMLVSLQ*KGRDVS
Trigger: ACTTACATCTCGTCCTTTGCACTGTAGAGACACCAG...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGTCCGGGTCTTTCTAACTaGATGAAGTTGTGTCGCAAG +
Preference number: 4 (lower is better)
Translates to: LPLPRAICGFLSVQISISPGLSN*MKLCRK
Trigger: CTTGCGACACAACTTCATGCAGTTAGAAAGACCCGG...ACTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCATGGATAGACGTTCACTaGTGTCAGCCTGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAWIDVH*CQPVGT
Trigger: AGTTCCAACAGGCTGACAGCAGTGAACGTCTATCCA...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGACCTCGAGGGGGATGTaGTCTACCAGTGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQTSRGM*STSVGR
Trigger: CCTTCCAACACTGGTAGAGCACATCCCCCTCGAGGT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGTGTGCAACAAGGGTGTaGAGCCTTTTACAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMCATRV*SLLQFA
Trigger: AGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACA...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATTTCTGTCAAGTCGTTaGAACTTAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPAFLSSR*NLGLQT
Trigger: AGTTTGTAGACCTAAGTTGCAACGACTTGACAGAAA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAGCTCCCACCCCCTCTaGAAAGCTATCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSSHPL*KAIHSK
Trigger: CTTGCTATGGATAGCTTTGCAGAGGGGGTGGGAGCT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGACCTCGGCACAGGACTaGTTGGCACGTGCCAACATT +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQTSAQD*LARANI
Trigger: AATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCATTCATTTCACAAGTaGAGCCTTCCTCACCAATAT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLHSFHK*SLPHQY
Trigger: ATATTGGTGAGGAAGGCTGCACTTGTGAAATGAATG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACACCCAGTTCTCTCTCTaGCTATGGATGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNTQFSL*LWMKVP
Trigger: CGGCACCTTCATCCATAGGCAGAGAGAGAACTGGGT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCAAACTCACCAATGTATTaGACACATACACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPANSPMY*THTLHS
Trigger: ACTGTGAAGTGTATGTGTGCAATACATTGGTGAGTT...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAGACTCCAGACTATTTaGAGATGCATTCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: GIGVYLHVALQINSTDTCRLQTI*RCIQVS
Trigger: AGATACTTGAATGCATCTGCAAATAGTCTGGAGTCT...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCACGATCCATGTGGCATaGTTTTTCACCATAAAATCG +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCTIHVA*FFTIKS
Trigger: CGATTTTATGGTGAAAAACCATGCCACATGGATCGT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATGTAGAATCTGTGGTTaGCAAAGGTTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPACRICG*QRFLIN
Trigger: ATTGATCAGAAACCTTTGCCAACCACAGATTCTACA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTCGGCACAGGACTGCTTaGCACGTGCCAACATTGGCT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTRHRTA*HVPTLA
Trigger: AGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCG...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCATCCCTAAATTTCCCTaGGAAATACCTAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCIPKFP*EIPSRY
Trigger: ATACCTGCTAGGTATTTCCCAGGGAAATTTAGGGAT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAAGCTTCTCTACTCAATaGGAGGTACACACAGAGACC +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIASFSTQ*EVHTET
Trigger: GGTCTCTGTGTGTACCTCCCATTGAGTAGAGAAGCT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCGACAAAAATACACCATaGCTGCCAAGACACATGTAT +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCDKNTP*LPRHMY
Trigger: ATACATGTGTCTTGGCAGCCATGGTGTATTTTTGTC...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAACTGGCTCCATCTCCTaGAAAACAGCACTCACTACA +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSTGSIS*KTALTT
Trigger: TGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGT...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAACTGGCTCCATCTCCTaGAAAACAGCACTCACTACA +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIATGSIS*KTALTT
Trigger: TGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTCTGCCACACCCAACTaGCTCCATCTCCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSATPN*LHLLEN
Trigger: GTTTTCCAGGAGATGGAGCCAGTTGGGTGTGGCAGA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CAA 72 bp TTGTTGTTGTTGTTAACTTCCCACAGTATCACACGGTaGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLLLTSHSITR*LSFEPPHIPVG
Trigger: ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGAAGTTAACAACAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTAGAGATCCACGGTACTaGTTCGCTGGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTRDPRY*FAGTPP
Trigger: AGGTGGTGTCCCAGCGAATCAGTACCGTGGATCTCT...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTCACGGGAACCTCTGTaGGAAGATTATAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSREPL*EDYSSH
Trigger: ATGTGAGCTATAATCTTCTCACAGAGGTTCCCGTGA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGTTCACGGGAACCTCTGTaGGAAGATTATAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: LPLPRAICGFLSVQISISSREPL*EDYSSH
Trigger: ATGTGAGCTATAATCTTCTCACAGAGGTTCCCGTGA...ACTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR TCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGTGAGTGCATTATGCTaGAGATCCAGCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQVSALC*RSSTSR
Trigger: CCTCGAGGTGCTGGATCTTCAGCATAATGCACTCAC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPMAPEG*RNCRIC
Trigger: ACAGATTCTACAGTTACGTCAACCTTCTGGAGCCAT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCATTCCTAATTTCCTGTaGGATACCAAGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: STWLCRSIAPTLAKQERGIPNFL*DTKKVL
Trigger: TAACACCTTCTTGGTATCTCACAGGAAATTAGGAAT...GCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAAAGAGTGTATCCCAATaGCACGTGCATATGAGCATG +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAKSVSQ*HVHMSM
Trigger: CATGCTCATATGCACGTGTCATTGGGATACACTCTT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAATTAACTTGCCTTCATaGTTGGGAGTCGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSINLPS*LGVGKP
Trigger: AGGCTTTCCGACTCCCAATCATGAAGGCAAGTTAAT...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAAAGCAAGGGAGTATTaGCGTCGCTTCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRKAREY*RRFTSS
Trigger: AGAAGAAGTGAAGCGACGGCAATACTCCCTTGCTTT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCAAAGCAAGGGAGTATTaGCGTCGCTTCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPKAREY*RRFTSS
Trigger: AGAAGAAGTGAAGCGACGGCAATACTCCCTTGCTTT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGCAGCCTTTTACAGTTTaGTATGGTTGTGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMQPFTV*YGCGNG
Trigger: ACCATTCCCACAACCATAGCAAACTGTAAAAGGCTG...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTGTGCAACAAGGGTGTaGAGCCTTTTACAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNCATRV*SLLQFA
Trigger: AGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTGTGCAACAAGGGTGTaGAGCCTTTTACAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRCATRV*SLLQFA
Trigger: AGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTTTCTGTCAAGTCGTTaGAACTTAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLFLSSR*NLGLQT
Trigger: AGTTTGTAGACCTAAGTTGCAACGACTTGACAGAAA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GGGGACTTGAACCTGGTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: GDLNLVVLLSVHLYFSSCVSLVD*CTSSKS
Trigger: GCTTTTAGAAGAGGTACAGCAGTCAACTAATGACAC...GCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCACCAGGTTCAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACCAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNQAKAT*WIGSVR
Trigger: CCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTG...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGGACTGCTTGGCACGTaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQGLLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACTGGAAAGATTAACTTaGCTTCATGATTGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKLERLT*LHDWES
Trigger: CGACTCCCAATCATGAAGGCAAGTTAATCTTTCCAG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGGTCCTGCTCTCGGTTCATTTGTATTTCTCTTCATGCTCATCCCTGAACACCAACCCAAGTTTATTATaGGACAAGTTCAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VVLLSVHLYFSSCSSLNTNPSLL*DKFRPF
Trigger: GAAGGGCCTGAACTTGTCCCATAATAAACTTGGGTT...GGTGTTCAGGGATGAGCATGAAGAGAAATACAAATGAACCGAGAGCAGGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATAGCAGGCAAAGCCTCTaGAATCAGGATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSRQSL*NQDFCQ
Trigger: TTGACAGAAATCCTGATTCCAGAGGCTTTGCCTGCT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCTCTTTCAGGGTTGTGATATaGCTAAATATGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TWLCRSIAPTLAKQERGSFRVVI*LNMSSV
Trigger: GACACTGGACATATTTAGCCATATCACAACCCTGAA...AGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGCTAAAGCTACTTGCTaGATCGGCAGTGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTAKATC*IGSVRA
Trigger: CGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAAGATATGTGGGGCTTaGGGAGGATCCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNKICGA*GGSKGR
Trigger: TCTACCCTTGGATCCTCCCCAAGCCCCACATATCTT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGCAACTCATCTTGAATaGTCAGCGGAGTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSATHLE*SAEWKI
Trigger: TATCTTCCACTCCGCTGACCATTCAAGATGAGTTGC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAGCCAGTTTTCCTCTTaGGCACTTCTGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSQFSS*ALLWPL
Trigger: AAGTGGCCACAGAAGTGCCCAAGAGGAAAACTGGCT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATTTCATAATGGGCTATaGCCTTTTTACCCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: ASSQLTSNILENHPSPPAFHNGL*PFYPVL
Trigger: TAAAACAGGGTAAAAAGGCCATAGCCCATTATGAAA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTCTTCAAGCAGTAATATaGCCTGTGACCCGGTTTATG +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRLQAVI*PVTRFM
Trigger: CATAAACCGGGTCACAGGCCATATTACTGCTTGAAG...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR TCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTAGAACATCTGACTaGATTAGACATTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMARTSD*IRHFSP
Trigger: AGGACTGAAATGTCTAATTCAGTCAGATGTTCTAGC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTCAAGACAGAGGGTTTaGAGATTTAGCAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSRQRV*RFSRLP
Trigger: TGGCAATCTGCTAAATCTTCAAACCCTCTGTCTTGA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGTGAGTGCATTATGCTaGAGATCCAGCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTVSALC*RSSTSR
Trigger: CCTCGAGGTGCTGGATCTTCAGCATAATGCACTCAC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTTTCTGGGAAAATGCTaGTGTTGTTGGAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNFLGKC*CCWSVQ
Trigger: TTGCACACTCCAACAACATCAGCATTTTCCCAGAAA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTCCAGCCTGAGCGACTaGGCAAGACTCCGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISSLSD*ARLRLK
Trigger: TTTGAGACGGAGTCTTGCTCAGTCGCTCAGGCTGGA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGGACAGGAGAATGGCTTaGACCCAGGGACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQDRRMA*TQGQRL
Trigger: CAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTC...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGGAGCTTTCACAGTCTaGCATCCAAAAGTTAAATCA +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKGAFTV*HPKVKS
Trigger: TGATTTAACTTTTGGATGTCAGACTGTGAAAGCTCC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGGAGTGGTAATTCAATaGCTTGACTCTATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSGVVIQ*LDSIVH
Trigger: GTGCACTATAGAGTCAAGTCATTGAATTACCACTCC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCATTATGTGTGACTGACTaGTCACCAAATGAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIALCVTD*SPNEAN
Trigger: GTTTGCCTCATTTGGTGATCAGTCAGTCACACATAA...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACAAGGAACTTATGTGTaGCTGACTGATCACCAAATG +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSQGTYV*LTDHQM
Trigger: CATTTGGTGATCAGTCAGTCACACATAAGTTCCTTG...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACCAAAACCGTAAGATATaGGCCCACTGTCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNQNRKI*AHCLDD
Trigger: GTCATCCAGACAGTGGGCTCATATCTTACGGTTTTG...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCATCCTTAAATCCACATaGTTGATATGGTTCATCCTA +
Preference number: 4 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCILKST*LIWFIL
Trigger: TAGGATGAACCATATCAAGCATGTGGATTTAAGGAT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGTGGCAGCCTCGTGAGTaGATTATGCTGAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQWQPRE*IMLKIQ
Trigger: CTGGATCTTCAGCATAATGCACTCACGAGGCTGCCA...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTGGACCCCACTTCACTaGTCACCTCTGAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIWTPLH*SPLRWT
Trigger: TGTCCACCTCAGAGGTGAGCAGTGAAGTGGGGTCCA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTCGTTTCAGAGTCATCTaGCATAACTTAAGGTCACGT +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRRFRVI*HNLRSR
Trigger: ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACG...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCTACCAGGACAGGTATaGACTGATCCGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQLPGQV*TDPSGD
Trigger: ATCTCCTGACGGATCAGTGCATACCTGTCCTGGTAG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTGCAAGATTCGCAGGTaGAGGTGCCCTACCAGGACA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFICKIRR*RCPTRT
Trigger: TGTCCTGGTAGGGCACCTGCACCTGCGAATCTTGCA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCATATCCCCTCCTTTTGTaGAGCACTTCACATCTATCA +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAYPLLL*STSHLS
Trigger: TGATAGATGTGAAGTGCTCCACAAAAGGAGGGGATA...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGACGATCCATGTGGCATaGTTTTTCACCATAAAATCG +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMTIHVA*FFTIKS
Trigger: CGATTTTATGGTGAAAAACCATGCCACATGGATCGT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAACCCAAGTTTATTATaGGACAAGTTCAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRNPSLL*DKFRPF
Trigger: GAAGGGCCTGAACTTGTCCCATAATAAACTTGGGTT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTCAGCCTGTTGGAACTaGCATAGAGGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISACWN*HRGSEG
Trigger: CCCTTCGGACCCTCTATGCCAGTTCCAACAGGCTGA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCTGCTGTCAGCCTGTTaGAACTGGCATAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFILLSAC*NWHRGS
Trigger: GGACCCTCTATGCCAGTTCCAACAGGCTGACAGCAG...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGTGCTCTACCAGTGTTaGAAGGTTTTGCACATGATT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPVLYQC*KVLHMI
Trigger: AATCATGTGCAAAACCTTCCAACACTGGTAGAGCAC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGGAGAAGAGGGTGTCTaGCAGCCTCGTGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIGEEGV*QPRECI
Trigger: AATGCACTCACGAGGCTGCCAGACACCCTCTTCTCC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGTGTAGAATCTGTGGTTaGCAAAGGTTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: YLHVALQINSTDTCKTRECRICG*QRFLIN
Trigger: ATTGATCAGAAACCTTTGCCAACCACAGATTCTACA...CTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGTTTAGAGAGGGGCACTaGCTTCCCACCTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQFREGH*LPTSAQ
Trigger: CTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAA...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTAGAGGATGGAGTGGCTaGCTTAGGGGCATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTRGWSG*LRGILD
Trigger: ATCAAGGATGCCCCTAAGCCAGCCACTCCATCCTCT...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCTGTCCTTGCTCATTaGCAGGAGCATGCCACTATT +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQPVLAH*QEHATI
Trigger: AATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATAACCCCACACAGCTATaGTTTAGAAATGTAGACGCA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNNPTQL*FRNVDA
Trigger: TGCGTCTACATTTCTAAACCATAGCTGTGTGGGGTT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTTCTCTCTCTGCCTATaGATGAAGGTGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIFSLCL*MKVPGC
Trigger: GCAGCCCGGCACCTTCATCCATAGGCAGAGAGAGAA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAATCCCTAAATTTCCCTaGGAAATACCTAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKIPKFP*EIPSRY
Trigger: ATACCTGCTAGGTATTTCCCAGGGAAATTTAGGGAT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAGTAGTTTGACAATCTaGGGACTCAAGTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMSSLTI*GLKFRF
Trigger: GAATCTGAACTTGAGTCCCCAGATTGTCAAACTACT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATCCTTCCAATCCATTTaGACAAAAATACACCATGGC +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKSFQSI*TKIHHG
Trigger: GCCATGGTGTATTTTTGTCCAAATGGATTGGAAGGA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp AAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTCTATCAGTAAGGTCCTaGTTGAATAGACAAATCCAT +
Preference number: 4 (lower is better)
Translates to: KKIFSLLACWLPLPRAICLSVRS*LNRQIH
Trigger: ATGGATTTGTCTATTCAACCAGGACCTTACTGATAG...ACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
3UTR CAA 72 bp GACAATCTGGGGACTCAAGTTCAGATTCTCGAGGGGTaGAACATTAGACATCCATTAGAGTGTACCAAATCC +
Preference number: 4 (lower is better)
Translates to: DNLGTQVQILEG*NIRHPLECTKS
Trigger: GGATTTGGTACACTCTAATGGATGTCTAATGTTCAACCCCTCGAGAATCTGAACTTGAGTCCCCAGATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTGTCTGGCAGCCTCGTaGGTGCATTATGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTCLAAS*VHYAED
Trigger: ATCTTCAGCATAATGCACTCACGAGGCTGCCAGACA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNMAPEG*RNCRIC
Trigger: ACAGATTCTACAGTTACGTCAACCTTCTGGAGCCAT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp GCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGATTCCTAATTTCCTGTaGGATACCAAGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: ASSASCHLWVPFSPNIYQIPNFL*DTKKVL
Trigger: TAACACCTTCTTGGTATCTCACAGGAAATTAGGAAT...CTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTCTTCTTCCAGGTCATaGGGCACAACAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTSSSRS*GTTNWS
Trigger: GGACCAGTTTGTTGTGCCTCATGACCTGGAAGAAGA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGCTCCCACCCCCTCTaGAAAGCTATCCATAGCAAG +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISSHPL*KAIHSK
Trigger: CTTGCTATGGATAGCTTTGCAGAGGGGGTGGGAGCT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAVSLVD*CTSSKS
Trigger: GCTTTTAGAAGAGGTACAGCAGTCAACTAATGACAC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGGACTGCTTGGCACGTaGCAACATTGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIGLLGT*QHWLQS
Trigger: TGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGGCCTCCTCTGGGTCCTaGTCCAGGCTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQASSGS*SRLKTL
Trigger: TAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGC...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATCCCTGGGAATTCCAATaGAGGTTAAATGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNPWEFQ*RLNVKL
Trigger: AAGTTTCACATTTAACCTGCATTGGAATTCCCAGGG...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCCCCTGGGAATTCCAATaGAGGTTAAATGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPPWEFQ*RLNVKL
Trigger: AAGTTTCACATTTAACCTGCATTGGAATTCCCAGGG...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTTAAGGTCACGTGGATaGAAGCAGTGTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTLRSRG*KQCQPW
Trigger: CCAAGGCTGACACTGCTTGCATCCACGTGACCTTAA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCACAACCCGAAGGTTCTaGCATCTAAGTAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPTTRRF*HLSKMF
Trigger: AAACATCTTACTTAGATGGCAGAACCTTCGGGTTGT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGACTCTATAGTGCACTaGAGCTTTATGTCATACCAA +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPDSIVH*SFMSYQ
Trigger: TTGGTATGACATAAAGCTGCAGTGCACTATAGAGTC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTCGATAACAGCCAGCTaGTCCCTTATGGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTSITAS*SLMEVS
Trigger: AGAGACCTCCATAAGGGAGCAGCTGGCTGTTATCGA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAAGACTCCAGACTATTTaGAGATGCATTCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: PIPPHARERRQSLNFPGKRLQTI*RCIQVS
Trigger: AGATACTTGAATGCATCTGCAAATAGTCTGGAGTCT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAACGATCCATGTGGCATaGTTTTTCACCATAAAATCG +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIATIHVA*FFTIKS
Trigger: CGATTTTATGGTGAAAAACCATGCCACATGGATCGT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCACGGTACTGATTCGCTaGGACACCACCTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFITVLIR*DTTLDA
Trigger: AGCATCCAAGGTGGTGTCCCAGCGAATCAGTACCGT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAGCAGGCAAAGCCTCTaGAATCAGGATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNSRQSL*NQDFCQ
Trigger: TTGACAGAAATCCTGATTCCAGAGGCTTTGCCTGCT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGTGTAGAATCTGTGGTTaGCAAAGGTTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMCRICG*QRFLIN
Trigger: ATTGATCAGAAACCTTTGCCAACCACAGATTCTACA...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTAAGATATGTGGGGCTTaGGGAGGATCCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTKICGA*GGSKGR
Trigger: TCTACCCTTGGATCCTCCCCAAGCCCCACATATCTT...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGCAACTCATCTTGAATaGTCAGCGGAGTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNATHLE*SAEWKI
Trigger: TATCTTCCACTCCGCTGACCATTCAAGATGAGTTGC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGAGGATGGAGTGGCTaGCTTAGGGGCATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIRGWSG*LRGILD
Trigger: ATCAAGGATGCCCCTAAGCCAGCCACTCCATCCTCT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGGCTCTCACACTTTTTaGCTCCGAGTTCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIGSHTF*LRVQPH
Trigger: GTGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGTCTTCCCAGTACCCCTaGGAATTCCAATGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQSSQYP*EFQCRL
Trigger: TAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGA...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAAGTAGTTTGACAATCTaGGGACTCAAGTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: QLAPSPGKQHSLQATVIASSLTI*GLKFRF
Trigger: GAATCTGAACTTGAGTCCCCAGATTGTCAAACTACT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGGGGAACACATCCTCTaGGTAAAGTACTCGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQGEHIL*VKYSEV
Trigger: TACTTCCGAGTACTTTACCCAGAGGATGTGTTCCCC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp GTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAACTATCAGTAAGGTCCTaGTTGAATAGACAAATCCAT +
Preference number: 4 (lower is better)
Translates to: VFTSTWLCRSIAPTLAKQLSVRS*LNRQIH
Trigger: ATGGATTTGTCTATTCAACCAGGACCTTACTGATAG...TTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNVGKGF*SIFRVV
Trigger: CACAACCCTGAAAATTGATCAGAAACCTTTGCCAAC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQMAPEG*RNCRIC
Trigger: ACAGATTCTACAGTTACGTCAACCTTCTGGAGCCAT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATATTCCTAATTTCCTGTaGGATACCAAGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNIPNFL*DTKKVL
Trigger: TAACACCTTCTTGGTATCTCACAGGAAATTAGGAAT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTATCAGCAACTCATCTTaGATGGTCAGCGGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTISNSS*MVSGVE
Trigger: TTCCACTCCGCTGACCATTCAAGATGAGTTGCTGAT...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGCTGTGGCCACTTCAATaGGGTTCAGGCTGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQLWPLQ*GSGCPL
Trigger: TAGAGGACAGCCTGAACCTCATTGAAGTGGCCACAG...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGTACACACAGAGACCTaGGAATATGCAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIVHTET*EYAEAR
Trigger: TCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTAC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTCTGGGAGAAGTGCATaGAATTTAGAATACAAGGAA +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPSGRSA*NLEYKE
Trigger: TTCCTTGTATTCTAAATTTCATGCACTTCTCCCAGA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTCTGGGAGAAGTGCATaGAATTTAGAATACAAGGAA +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRSGRSA*NLEYKE
Trigger: TTCCTTGTATTCTAAATTTCATGCACTTCTCCCAGA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCACTACAATACGACAATaGTTGCACAAAACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPTTIRQ*LHKTVR
Trigger: TCTTACGGTTTTGTGCAATCATTGTCGTATTGTAGT...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGGACAGGTATGCACTaGTCCGTCAGGAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIRTGMH*SVRRLL
Trigger: CAACAATCTCCTGACGGATCAGTGCATACCTGTCCT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGATCCTTAAATCCACATaGTTGATATGGTTCATCCTA +
Preference number: 4 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMILKST*LIWFIL
Trigger: TAGGATGAACCATATCAAGCATGTGGATTTAAGGAT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp GGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAATCCTTAAATCCACATaGTTGATATGGTTCATCCTA +
Preference number: 4 (lower is better)
Translates to: GFLCLVPFVGSFQSKYLSILKST*LIWFIL
Trigger: TAGGATGAACCATATCAAGCATGTGGATTTAAGGAT...TGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACCAGCCTTTTACAGTTTaGTATGGTTGTGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNQPFTV*YGCGNG
Trigger: ACCATTCCCACAACCATAGCAAACTGTAAAAGGCTG...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACCGTTTCAGAGTCATCTaGCATAACTTAAGGTCACGT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNRFRVI*HNLRSR
Trigger: ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACG...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATATTATCAGAATTCGGTaGTCTGCTTCAAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNIIRIR*SASSSN
Trigger: ATTACTGCTTGAAGCAGAGCACCGAATTCTGATAAT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR GCA 90 bp TTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAGACTATTTGCAGATaGATTCAAGTATCTGAGATT +
Preference number: 4 (lower is better)
Translates to: LVFTSTWLCRSIAPTLAKQTICR*IQVSEI
Trigger: AATCTCAGATACTTGAATGCATCTGCAAATAGTCTG...TTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CCA 90 bp CTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATATCTATCAGTTGTAGAATCTGTGGTTaGCAAAGGTTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: LPLPRAICGFLSVQISISCRICG*QRFLIN
Trigger: ATTGATCAGAAACCTTTGCCAACCACAGATTCTACA...ACTGATAGATATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGAGGAGCCCAACTTCTaGCCAGCCATTCCTAATTTC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIEEPNF*PAIPNF
Trigger: GAAATTAGGAATGGCTGGCCAGAAGTTGGGCTCCTC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGCCAGTTTTCCTCTTaGGCACTTCTGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISQFSS*ALLWPL
Trigger: AAGTGGCCACAGAAGTGCCCAAGAGGAAAACTGGCT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAAGCACATTCCCCATTaGGTAAAATCAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNKHIPH*VKSSNA
Trigger: GGCATTGCTTGATTTTACCCAATGGGGAATGTGCTT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGGAGAAGGTGAGCCTGTaGCTTCCAAGTACCGGCTTT +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQEKVSL*LPSTGF
Trigger: AAAGCCGGTACTTGGAAGCCACAGGCTCACCTTCTC...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCACTTGCCTTCATGATTaGGAGTCGGAAAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFITCLHD*ESESLH
Trigger: GTGGAGGCTTTCCGACTCCCAATCATGAAGGCAAGT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTCACACCCCATTAGTCTaGGATAAGGTGATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTHTPLV*DKVISL
Trigger: CAGAGAAATCACCTTATCTCAGACTAATGGGGTGTG...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGGGCCTCTGAGAAGATaGAGACACATAATTATTATG +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNGPLRR*RHIIIM
Trigger: CATAATAATTATGTGTCTTCATCTTCTCAGAGGCCC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGTACCGGCTTTTGCTaGAGGTCTACATGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISTGFC*RSTWEE
Trigger: TTCTTCCCATGTAGACCTTCAGCAAAAGCCGGTACT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATATCCTTAAATCCACATaGTTGATATGGTTCATCCTA +
Preference number: 4 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNILKST*LIWFIL
Trigger: TAGGATGAACCATATCAAGCATGTGGATTTAAGGAT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGCACAGCTTATTTCTCTaGCCTGCCATCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQHSLFL*PAISAS
Trigger: ACTGGCTGAGATGGCAGGGCAGAGAAATAAGCTGTG...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGCAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQQAKAT*WIGSVR
Trigger: CCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTG...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCTGATACAGAACAGCTaGTTTCTTCCCAGTACCCCT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFILIQNS*FLPSTP
Trigger: AGGGGTACTGGGAAGAAAGCAGCTGTTCTGTATCAG...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAAAATACACCATGGCTaGCAAGACACATGTATTTTT +
Preference number: 4 (lower is better)
Translates to: FSLASVRFRVICHNLRSRKIHHG*QDTCIF
Trigger: AAAAATACATGTGTCTTGGCAGCCATGGTGTATTTT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAAAAATACACCATGGCTaGCAAGACACATGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSKIHHG*QDTCIF
Trigger: AAAAATACATGTGTCTTGGCAGCCATGGTGTATTTT...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGTCCACATGCTTGATATaGTTCATCCTATTCAGCACC +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQSTCLI*FILFST
Trigger: GGTGCTGAATAGGATGAACCATATCAAGCATGTGGA...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCATTTCATAATGGGCTATaGCCTTTTTACCCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LFSLASVRFRVICHNLRSFHNGL*PFYPVL
Trigger: TAAAACAGGGTAAAAAGGCCATAGCCCATTATGAAA...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGCTTCTCTACTCAATaGGAGGTACACACAGAGACC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISFSTQ*EVHTET
Trigger: GGTCTCTGTGTGTACCTCCCATTGAGTAGAGAAGCT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGACAAAAATACACCATaGCTGCCAAGACACATGTAT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNDKNTP*LPRHMY
Trigger: ATACATGTGTCTTGGCAGCCATGGTGTATTTTTGTC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGTCCCTTGCCTCCTCCTaGAGCAAAATTATCAGAATT +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQSLASS*SKIIRI
Trigger: AATTCTGATAATTTTGCTCCAGGAGGAGGCAAGGGA...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCCGTCAGGAGATTGTTaGTCAGATAAAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIPSGDC*SDKAAA
Trigger: TGCAGCTGCTTTATCTGACCAACAATCTCCTGACGG...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACATTCCTAATTTCCTGTaGGATACCAAGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNIPNFL*DTKKVL
Trigger: TAACACCTTCTTGGTATCTCACAGGAAATTAGGAAT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGAATGGGTCTTGTACGTaGCGTACAGCATTGACAGCT +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQNGSCT*RTALTA
Trigger: AGCTGTCAATGCTGTACGTCACGTACAAGACCCATT...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGGAGTGGTAATTCAATaGCTTGACTCTATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTGVVIQ*LDSIVH
Trigger: GTGCACTATAGAGTCAAGTCATTGAATTACCACTCC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTTTCTGTCAAGTCGTTaGAACTTAGGTCTACAAACT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNFLSSR*NLGLQT
Trigger: AGTTTGTAGACCTAAGTTGCAACGACTTGACAGAAA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR GCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAGACTCCAGACTATTTaGAGATGCATTCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNRLQTI*RCIQVS
Trigger: AGATACTTGAATGCATCTGCAAATAGTCTGGAGTCT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGTTCAGGGTTGTGATATaGCTAAATATGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQFRVVI*LNMSSV
Trigger: GACACTGGACATATTTAGCCATATCACAACCCTGAA...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTGTAGAATCTGTGGTTaGCAAAGGTTTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNCRICG*QRFLIN
Trigger: ATTGATCAGAAACCTTTGCCAACCACAGATTCTACA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGTCCATCTGTTCTCATTaGCCTCAGTCCGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQSICSH*PQSVSE
Trigger: CTCTGAAACGGACTGAGGCCAATGAGAACAGATGGA...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIVGKGF*SIFRVV
Trigger: CACAACCCTGAAAATTGATCAGAAACCTTTGCCAAC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCATCCATAGCAAGTGCTaGGACACACAGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIIHSKC*DTQLIS
Trigger: AGAAATAAGCTGTGTGTCTCAGCACTTGCTATGGAT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGACTACAATACGACAATaGTTGCACAAAACCGTAAGA +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQTTIRQ*LHKTVR
Trigger: TCTTACGGTTTTGTGCAATCATTGTCGTATTGTAGT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTCATTCATTTCACAAGTaGAGCCTTCCTCACCAATAT +
Preference number: 4 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTHSFHK*SLPHQY
Trigger: ATATTGGTGAGGAAGGCTGCACTTGTGAAATGAATG...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAACCCAAGTTTATTATaGGACAAGTTCAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFINPSLL*DKFRPF
Trigger: GAAGGGCCTGAACTTGTCCCATAATAAACTTGGGTT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR TCA 90 bp TGGTTGAATAGACAAATCCATCCATACAATGAAGTCGAAGGCCACTTAACAAAAGTAACAAATAAAAGCTaGCCTCGGACAAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: WLNRQIHPYNEVEGHLTKVTNKS*PRTRRS
Trigger: AGATCTTCTTGTCCGAGGTCAGCTTTTATTTGTTAC...TTTTGTTAAGTGGCCTTCGACTTCATTGTATGGATGGATTTGTCTATTCAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCTTAATTTTCTTTACTaGTGTCTGTGTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQLNFLY*CLCFHP
Trigger: TGGATGGAAACACAGACAGCAGTAAAGAAAATTAAG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGACTTCACATCTATCATaGTCATTCGTAATAACTCAG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQTSHLS*SFVITQ
Trigger: CTGAGTTATTACGAATGAGCATGATAGATGTGAAGT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR GCA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGAAGATTGGCTCGAGTaGAGATTCAAAAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQEDWLE*RFKNKK
Trigger: CTTTTTATTTTTGAATCTGCACTCGAGCCAATCTTC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGAACCCAAGTTTATTATaGGACAAGTTCAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQNPSLL*DKFRPF
Trigger: GAAGGGCCTGAACTTGTCCCATAATAAACTTGGGTT...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTCCTTCCAATCCATTTaGACAAAAATACACCATGGC +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISFQSI*TKIHHG
Trigger: GCCATGGTGTATTTTTGTCCAAATGGATTGGAAGGA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
3UTR CAA 72 bp TCCTTTCAGTCCAAATATCTATCAGTAAGGTCCTGGTaGAATAGACAAATCCATCCATACAATGAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: SFQSKYLSVRSW*NRQIHPYNEVE
Trigger: TTCGACTTCATTGTATGGATGGATTTGTCTATTCAACCAGGACCTTACTGATAGATATTTGGACTGAAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR TCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGGGGCCTCTGAGAAGATaGAGACACATAATTATTATG +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQGPLRR*RHIIIM
Trigger: CATAATAATTATGTGTCTTCATCTTCTCAGAGGCCC...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGACAACCCGAAGGTTCTaGCATCTAAGTAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQTTRRF*HLSKMF
Trigger: AAACATCTTACTTAGATGGCAGAACCTTCGGGTTGT...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR GCA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAACTCACCAATGTATTaGACACATACACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFINSPMY*THTLHS
Trigger: ACTGTGAAGTGTATGTGTGCAATACATTGGTGAGTT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CCA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGGTTTCATATTTCTCTTaGCAAGGCCTTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQVSYFS*QGLFSS
Trigger: GGAAGAGAAAAGGCCTTGCCAAGAGAAATATGAAAC...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCAAGCAGTGTCAGCCTaGGGCCCCCGCTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHQAVSA*GPRSPP
Trigger: GGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCAAGCAGTGTCAGCCTaGGGCCCCCGCTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIQAVSA*GPRSPP
Trigger: GGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS CCA 90 bp GGTAGCAGAAGAAGGCTGGCGCTGAAACAGCCCAGAGGTGGGTGTTaGGTGGAGGCTGCAGCGCCGCTCTGGCCTCGGAAGCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GSRRRLALKQPRGGC*VEAAAPLWPRKQGS
Trigger: ACTGCCTTGCTTCCGAGGCCAGAGCGGCGCTGCAGCCTCCACCCAACACCCACCTCTGGGCTGTTTCAGCGCCAGCCTTCTTCTGCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGCCCTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ELEQVRQLDQQYTILRSPLVLHP*SLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAA...GGGCGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCCCGAGACCCCACCATaGCACTCCAGCCTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIPETPP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGGTGGGGTCTCGGG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CCA 90 bp AGTGCTGTGTCGAACTCCTCCGGGGGCTCGGTCCGATCCTCTTCATaGGGCTCAGGCTCGAGCCGGCTGTCCTGGTGCTGTTTCATTTGT +
Preference number: 5 (lower is better)
Translates to: SAVSNSSGGSVRSSS*GSGSSRLSWCCFIC
Trigger: ACAAATGAAACAGCACCAGGACAGCCGGCTCGAGCCTGAGCCCCATGAAGAGGATCGGACCGAGCCCCCGGAGGAGTTCGACACAGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCGCTGGGACACCACCTaGGATGCTTGCCGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHRWDTT*DACRCH
Trigger: ATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGCG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGCAGTCTGTTGGCCTGTaGGCTTCCTCTGCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: TELEQVRQLDQQYTILRSQSVGL*ASSASC
Trigger: GCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTG...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS CCA 90 bp CTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAGGGGCACTaGCTTCCCACCTCGGCACAGGACTGCTTGGCACGTGCCAACATT +
Preference number: 5 (lower is better)
Translates to: LLWVLLQAEDFREGH*LPTSAQDCLARANI
Trigger: AATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCTTGGATGCTTGCCGTaGCCATCGCTGGTACTCGGC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTILGCLP*PSLVLG
Trigger: GCCGAGTACCAGCGATGGCAACGGCAAGCATCCAAG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCACCACCTTGGATGCTaGCCGTTGCCATCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHHHLGC*PLPSLV
Trigger: TACCAGCGATGGCAACGGCAAGCATCCAAGGTGGTG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCCACGGTTGCTTTCATTaGAGCCTCCCCACATCCCTG +
Preference number: 5 (lower is better)
Translates to: GTELEQVRQLDQQYTILRHGCFH*SLPTSL
Trigger: CAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTG...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGCCATTACAGGAAAGGTaGAGCTCAGTCAGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLPLQER*SSVRVE
Trigger: CTCTACCCTGACTGAGCTCAACCTTTCCTGTAATGG...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp AAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: KWLLTEAAFSLLAAVGYCCDDGF*VLHPLS
Trigger: GCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACA...GCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGCCCAAGAGTCGAACAATGTaGTCAGGGAAGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ELEQVRQLDQQYTILRSPKSRTM*SGKWLL
Trigger: GAGGAGCCACTTCCCTGACAACATTGTTCGACTCTT...GGGCGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGCACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCGAAGGACTGAATGGCTaGGCCAAGATGACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GTELEQVRQLDQQYTILREGLNG*AKMTRQ
Trigger: CTGCCTTGTCATCTTGGCCAAGCCATTCAGTCCTTC...GCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS CCA 90 bp GCAAGGCAGTGTCCAGGCCCCCAGCATTATGCTCATCAGAAGCAGTaGACCCCACTTCACTGCTCACCTCTGAGGTGGACATCTCACTGC +
Preference number: 5 (lower is better)
Translates to: ARQCPGPQHYAHQKQ*TPLHCSPLRWTSHC
Trigger: GCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAAGTGGGGTCCACTGCTTCTGATGAGCATAATGCTGGGGGCCTGGACACTGCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGAAAGTCAGTCAGTCGGTaGTCCCGCAGATCCACGTGG +
Preference number: 5 (lower is better)
Translates to: SCSSLNTTGMAGDPLPEGKSVSR*SRRSTW
Trigger: CCACGTGGATCTGCGGGACAACCGACTGACTGACTT...TCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCCCGAGACCCCACCATaGCACTCCAGCCTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCPETPP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGGTGGGGTCTCGGG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAGACAGGAGAATGGCTaGAACCCAGGGACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRRQENG*NPGTEA
Trigger: AGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCCAGTCTGTTGGCCTGTaGGCTTCCTCTGCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: SDKKIFSLLACWLPLPRAQSVGL*ASSASC
Trigger: GCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTG...GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS TCA 90 bp GCCTTGGAGAAGAGGGTGTCTGGCAGCCTCGTGAGTGCATTATGCTaGAGATCCAGCACCTCGAGGGGGATGTGCTCTACCAGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: ALEKRVSGSLVSALC*RSSTSRGMCSTSVG
Trigger: TCCAACACTGGTAGAGCACATCCCCCTCGAGGTGCTGGATCTTCAGCATAATGCACTCACGAGGCTGCCAGACACCCTCTTCTCCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCCATTACAGGAAAGGTaGAGCTCAGTCAGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHPLQER*SSVRVE
Trigger: CTCTACCCTGACTGAGCTCAACCTTTCCTGTAATGG...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TGCCAGCTGGCAGGCACCGACGGAGCAGCAGCCACCTTTGCTTGTCTTCTCGTGGGGAAAATGCTGATGTaGTTGGAGTGTGCAACAAGG +
Preference number: 5 (lower is better)
Translates to: CQLAGTDGAAATFACLLVGKMLM*LECATR
Trigger: CCTTGTTGCACACTCCAACAACATCAGCATTTTCCC...CACGAGAAGACAAGCAAAGGTGGCTGCTGCTCCGTCGGTGCCTGCCAGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACTGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHWHVPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCA...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: GLLASSASCHLWVPFSPNSAQDC*ARANIG
Trigger: GCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGA...ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ATGCAAGCAGTGTCAGCCTTGGGCCCCCGCTCCCCGCCCTTAGGAAGCTGTCTGGTTACCCCATTCACTTaGTTGTCCTCTGTGATGATG +
Preference number: 5 (lower is better)
Translates to: MQAVSALGPRSPPLGSCLVTPFT*LSSVMM
Trigger: CATCATCACAGAGGACAACAAAGTGAATGGGGTAAC...CAGACAGCTTCCTAAGGGCGGGGAGCGGGGGCCCAAGGCTGACACTGCTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGGCTTAGGGGCATCCTaGATAGTGGTGGTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRGLGAS*IVVVEA
Trigger: TGCTTCAACCACCACTATCAAGGATGCCCCTAAGCC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCCTGTCCTTGCTCATaGGCAGGAGCATGCCACTAT +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSCPCS*AGACHY
Trigger: ATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAACTCCATCCTGTCCTaGCTCATTGGCAGGAGCATG +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRNSILS*LIGRSM
Trigger: CATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTCTGAGATTTAAGGCCTaGGAGAAGAGGGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: EPRVEQCCQGSGSSRRPPLRFKA*EKRVSG
Trigger: GCCAGACACCCTCTTCTCCAAGGCCTTAAATCTCAG...AGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTTCTGCCTCGTGCCATTaGTGGGTTCCTTTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVASASCH*WVPFSP
Trigger: TGGACTGAAAGGAACCCACAAATGGCACGAGGCAGA...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp CCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCACACGGTTGCTTTCATTaGAGCCTCCCCACATCCCTG +
Preference number: 5 (lower is better)
Translates to: PRVEQCCQGSGSSRRPPSHGCFH*SLPTSL
Trigger: CAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTG...TGAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS GCA 90 bp TGCTTGGCACGTGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGGGCGGATGTAGCACAGGAGAGCGGA +
Preference number: 5 (lower is better)
Translates to: CLARANIGYSQAKAT*WIGSVRADVAQESG
Trigger: TCCGCTCTCCTGTGCTACATCCGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 90 bp TTGGCACGTGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGCTaGATCGGCAGTGTCAGGGCGGATGTAGCACAGGAGAGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: LARANIGYSQAKATC*IGSVRADVAQESGG
Trigger: TCCTCCGCTCTCCTGTGCTACATCCGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 90 bp GCAACTCATCTTGAATGGTCAGCGGAGTGGAAGATATGTGGGGCTTaGGGAGGATCCAAGGGTAGAGGTATGTACAGCCCAGCATCCGGG +
Preference number: 5 (lower is better)
Translates to: ATHLEWSAEWKICGA*GGSKGRGMYSPASG
Trigger: CCCGGATGCTGGGCTGTACATACCTCTACCCTTGGATCCTCCCCAAGCCCCACATATCTTCCACTCCGCTGACCATTCAAGATGAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATGTAGTCCCAGCTACTaGAGGGTGGAGAACAGATTG +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRCSPSY*RVENRL
Trigger: CAATCTGTTCTCCACCCTCAAGTAGCTGGGACTACA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGAAAGCAAGGGAGTATaGCCGTCGCTTCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRESKGV*PSLHFF
Trigger: GAAGAAGTGAAGCGACGGCAATACTCCCTTGCTTTC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTCCATTACAGGAAAGGTaGAGCTCAGTCAGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: EPRVEQCCQGSGSSRRPPPLQER*SSVRVE
Trigger: CTCTACCCTGACTGAGCTCAACCTTTCCTGTAATGG...AGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp GAAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGGATTGCCAATTTGACTaGGTAGGTCATGAAATCCAT +
Preference number: 5 (lower is better)
Translates to: EVAPHGGRLQPPSGSGLLDCQFD*VGHEIH
Trigger: ATGGATTTCATGACCTACCAAGTCAAATTGGCAATC...CAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp AAGTGGCTCCTCACGGAGGCCGCCTTCAGCCTCCTAGCGGCAGTGGGCTACTGCATTTCTGTCAAGTCGTaGCAACTTAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: KWLLTEAAFSLLAAVGYCISVKS*QLRSTN
Trigger: GTTTGTAGACCTAAGTTGCAACGACTTGACAGAAAT...GCAGTAGCCCACTGCCGCTAGGAGGCTGAAGGCGGCCTCCGTGAGGAGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLSAQDC*ARANIG
Trigger: GCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ASSQLTSNILENHPSPPALVLHP*SLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TCCCACAGTATCACACGGTTGCTTTCATTTGAGCCTCCCCACATCCCTGTGGGTTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SHSITRLLSFEPPHIPVGLVLHP*SLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAA...ACCCACAGGGATGTGGGGAGGCTCAAATGAAAGCAACCGTGTGATACTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTACTTCCACCTCTACCTaGCTGCCATTGGTTATGACC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTITSTST*LPLVMT
Trigger: GGTCATAACCAATGGCAGCAAGGTAGAGGTGGAAGT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACCCGAGACCCCACCATaGCACTCCAGCCTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKPETPP*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGGTGGGGTCTCGGG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATCCAAGTACCGGCTTTaGCTGAAGGTCTACATGGGA +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRSKYRL*LKVYMG
Trigger: TCCCATGTAGACCTTCAGCAAAAGCCGGTACTTGGA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCGCTACTGCACAGGCATaGGTGTTTACCTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: SDKKIFSLLACWLPLPRAATAQA*VFTSTW
Trigger: CCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGC...GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTAAGATCTTCAGTCTGTaGGCCTGTTGGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EPRVEQCCQGSGSSRRPPKIFSL*ACWLPL
Trigger: CAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTT...AGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS TCA 90 bp AGAGGATGGAGTGGCTGGCTTAGGGGCATCCTTGATAGTGGTGGTTaGAGCAAATCCCACAGGACCTGGGAGGGTGAGCCCATTCATTTC +
Preference number: 5 (lower is better)
Translates to: RGWSGWLRGILDSGG*SKSHRTWEGEPIHF
Trigger: GAAATGAATGGGCTCACCCTCCCAGGTCCTGTGGGATTTGCTTCAACCACCACTATCAAGGATGCCCCTAAGCCAGCCACTCCATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 90 bp GAAGACTTTAGAGAGGGGCACTGGCTTCCCACCTCGGCACAGGACTaGTTGGCACGTGCCAACATTGGCTACAGTCAAGCTAAAGCTACT +
Preference number: 5 (lower is better)
Translates to: EDFREGHWLPTSAQD*LARANIGYSQAKAT
Trigger: AGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAAGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 90 bp ACTTTAGAGAGGGGCACTGGCTTCCCACCTCGGCACAGGACTGCTTaGCACGTGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGCT +
Preference number: 5 (lower is better)
Translates to: TLERGTGFPPRHRTA*HVPTLATVKLKLLA
Trigger: AGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 90 bp CTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAAGACTTTAGAGAGGGGCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: LCDDGFLVLHPLSLL*VLLQAEDFREGHWL
Trigger: AAGCCAGTGCCCCTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGAGCTAGAGCAGGTTCGGCAGCTGGACCAGCAGTACACGATCCTCCGCTCGTGTGCTCTACCAGTGTaGGAAGGTTTTGCACATGAT +
Preference number: 5 (lower is better)
Translates to: TELEQVRQLDQQYTILRSCALPV*EGFAHD
Trigger: ATCATGTGCAAAACCTTCCAACACTGGTAGAGCACA...CGAGCGGAGGATCGTGTACTGCTGGTCCAGCTGCCGAACCTGCTCTAGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTGCAGCCTTTTACAGTTaGCTATGGTTGTGGGAATGG +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIAAFYS*LWLWEW
Trigger: CCATTCCCACAACCATAGCAAACTGTAAAAGGCTGC...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTGCAGCCTTTTACAGTTaGCTATGGTTGTGGGAATGG +
Preference number: 5 (lower is better)
Translates to: EPRVEQCCQGSGSSRRPPAAFYS*LWLWEW
Trigger: CCATTCCCACAACCATAGCAAACTGTAAAAGGCTGC...AGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp TACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: YLHVALQINSTDTCKTRESAQDC*ARANIG
Trigger: GCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGA...CTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTICDDGF*VLHPLS
Trigger: GCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACA...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTACCCCATTCACTTTGTaGTCCTCTGTGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTITPFTL*SSVMMA
Trigger: AGCCATCATCACAGAGGACAACAAAGTGAATGGGGT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 90 bp ATGTTCCTCAGAACACAGGGTAGGAGAACTCTCTATGAGAGGGGGTaGGTTCTCCAGATCCCTCCCCCTGCAGCAGTGGATGTCTACTTC +
Preference number: 5 (lower is better)
Translates to: MFLRTQGRRTLYERG*VLQIPPPAAVDVYF
Trigger: GAAGTAGACATCCACTGCTGCAGGGGGAGGGATCTGGAGAACTCACCCCCTCTCATAGAGAGTTCTCCTACCCTGTGTTCTGAGGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 90 bp TCTTCCGGAACCTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SSGTSVMMAFWSFTL*ASSGSCSRLKTLER
Trigger: CCTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGGTTCCGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS GCA 90 bp CAAGGTGCAAGATTCGCAGGTGCAGGTGCCCTACCAGGACAGGTATaGACTGATCCGTCAGGAGATTGTTGGTCAGATAAAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: QGARFAGAGALPGQV*TDPSGDCWSDKAAA
Trigger: TGCAGCTGCTTTATCTGACCAACAATCTCCTGACGGATCAGTGCATACCTGTCCTGGTAGGGCACCTGCACCTGCGAATCTTGCACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACAAAGTAGTCAGAAAGTaGCCATCAAGACAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: TGEWLEPRDRGCSDPRPHKVVRK*PSRQRV
Trigger: AACCCTCTGTCTTGATGGCAACTTTCTGACTACTTT...GTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTATACTTCTATCTTCTTaGCTTCACAGGCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIILLSS*LHRPSQ
Trigger: CTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTAT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGATGTGCTCTACCAGTGTaGGAAGGTTTTGCACATGAT +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRCALPV*EGFAHD
Trigger: ATCATGTGCAAAACCTTCCAACACTGGTAGAGCACA...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: EHHGNGRRPSPRRTPKKDWHVPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCA...ATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMSAQDC*ARANIG
Trigger: GCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGA...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCATCTACCTTGCTGCCATaGGTTATGACCCCCTCAACG +
Preference number: 5 (lower is better)
Translates to: ASSQLTSNILENHPSPPASTLLP*VMTPST
Trigger: CGTTGAGGGGGTCATAACCAATGGCAGCAAGGTAGA...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCTGTAATCACAGCACTTaGGGAGGCAGAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCCNHST*GGRGGW
Trigger: CCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTACA...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCACTGAGATTTAAGGCCTaGGAGAAGAGGGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: ASSQLTSNILENHPSPPALRFKA*EKRVSG
Trigger: GCCAGACACCCTCTTCTCCAAGGCCTTAAATCTCAG...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp CTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGGTGTTTACCTCCACGTGGCTATCCTGCAGGTGCTTTaGGTTAAGAACCCAATTCTC +
Preference number: 5 (lower is better)
Translates to: LLAAVGYCTGIGVYLHVAILQVL*VKNPIL
Trigger: GAGAATTGGGTTCTTAACCAAAAGCACCTGCAGGAT...AGCCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGCCCACTGCCGCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR CAA 90 bp TCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCAAGAGTCGAACAATGTaGTCAGGGAAGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SDKKIFSLLACWLPLPRAKSRTM*SGKWLL
Trigger: GAGGAGCCACTTCCCTGACAACATTGTTCGACTCTT...GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS TCA 90 bp TTAGTTTGTTTAAGGCCTTGGAGAAGAGGGTGTCTGGCAGCCTCGTaGGTGCATTATGCTGAAGATCCAGCACCTCGAGGGGGATGTGCT +
Preference number: 5 (lower is better)
Translates to: LVCLRPWRRGCLAAS*VHYAEDPAPRGGCA
Trigger: AGCACATCCCCCTCGAGGTGCTGGATCTTCAGCATAATGCACTCACGAGGCTGCCAGACACCCTCTTCTCCAAGGCCTTAAACAAACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS TCA 90 bp ATTATGCTCATCAGAAGCAGTGGACCCCACTTCACTGCTCACCTCTaGGGTGGACATCTCACTGCTGAACTCAGAGGCAATCCCACTGCT +
Preference number: 5 (lower is better)
Translates to: IMLIRSSGPHFTAHL*GGHLTAELRGNPTA
Trigger: AGCAGTGGGATTGCCTCTGAGTTCAGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAAGTGGGGTCCACTGCTTCTGATGAGCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 90 bp GTTGACTGCTGTACCTCTTCTAAAAGCACATCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCCTCATTTCGGTCTCCATCAAACATG +
Preference number: 5 (lower is better)
Translates to: VDCCTSSKSTSAIVH*SRRGSSSFRSPSNM
Trigger: CATGTTTGATGGAGACCGAAATGAGGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGATGTGCTTTTAGAAGAGGTACAGCAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 90 bp AGAGGCAGGAGGTGGAGGGAGACTTCTGTAACTCCATCCTGTCCTTaGTCATTGGCAGGAGCATGCCACTATTCACACTGTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RGRRWRETSVTPSCP*SLAGACHYSHCSVF
Trigger: GAAGACAGAACAGTGTGAATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTTACAGAAGTCTCCCTCCACCTCCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CCA 90 bp GGTGCCCTACCAGGACAGGTATGCACTGATCCGTCAGGAGATTGTTaGTCAGATAAAGCAGCTGCAGCATACTCAAACTCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GALPGQVCTDPSGDC*SDKAAAAYSNSPLQ
Trigger: CTGGAGAGGAGAGTTTGAGTATGCTGCAGCTGCTTTATCTGACCAACAATCTCCTGACGGATCAGTGCATACCTGTCCTGGTAGGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCCGCTGGGACACCACCTaGGATGCTTGCCGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPRWDTT*DACRCH
Trigger: ATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGCG...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATCGCTGGGACACCACCTaGGATGCTTGCCGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNRWDTT*DACRCH
Trigger: ATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGCG...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAAGTCAGTCAGTCGGTaGTCCCGCAGATCCACGTGG +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMKSVSR*SRRSTW
Trigger: CCACGTGGATCTGCGGGACAACCGACTGACTGACTT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGATACTTCTATCTTCTTaGCTTCACAGGCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: FMLIPEHHGNGRRPSPRRILLSS*LHRPSQ
Trigger: CTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTAT...CCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp TCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGAAAAATGCTGATGTTGTaGGAGTGTGCAACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SCSSLNTTGMAGDPLPEGKMLML*ECATRV
Trigger: CACCCTTGTTGCACACTCCAACAACATCAGCATTTT...TCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGAGCCAAGAGTCGAACAGGGAAAATGCTGATGTaGTTGGAGTGTGCAACAAGG +
Preference number: 5 (lower is better)
Translates to: GLGVLTMGVLLQGAKSRTGKMLM*LECATR
Trigger: CCTTGTTGCACACTCCAACAACATCAGCATTTTCCC...TGTTCGACTCTTGGCTCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GCCAAGAGTCGAACAATGTTGTCAGGGAAGTGGCTCCTCACGGAGGCCGCCTTCGTTCCAGAACCAGATTaGTATTTCCAGTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: AKSRTMLSGKWLLTEAAFVPEPD*YFQSGQ
Trigger: TTGACCTGACTGGAAATACAAATCTGGTTCTGGAAC...GAAGGCGGCCTCCGTGAGGAGCCACTTCCCTGACAACATTGTTCGACTCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCTGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: GIGVYLHVALQINSTDTCWHVPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCA...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCTCTACCTTGCTGCCATaGGTTATGACCCCCTCAACG +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCSTLLP*VMTPST
Trigger: CGTTGAGGGGGTCATAACCAATGGCAGCAAGGTAGA...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTGGCTCTCACACTTTTaGGCTCCGAGTTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLWLSHF*APSSTP
Trigger: TGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCCA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAAAGCACATTCCCCATaGGGTAAAATCAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRKAHSP*GKIKQC
Trigger: GCATTGCTTGATTTTACCCAATGGGGAATGTGCTTT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTAAAGCACATTCCCCATaGGGTAAAATCAAGCAATGC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIKAHSP*GKIKQC
Trigger: GCATTGCTTGATTTTACCCAATGGGGAATGTGCTTT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTCTGCCTCGTGCCATTaGTGGGTTCCTTTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: DKKIFSLLACWLPLPRAISASCH*WVPFSP
Trigger: TGGACTGAAAGGAACCCACAAATGGCACGAGGCAGA...AATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS TCA 90 bp ACTTTGTTGTCCTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TLLSSVMMAFWSFTL*ASSGSCSRLKTLER
Trigger: CCTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGGACAACAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 90 bp AGAACCCAATTCTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTTaGGCCTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RTQFSVMMAFWSFTL*ASSGSCSRLKTLER
Trigger: CCTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGAATTGGGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCACACCACCTTGGATGCTaGCCGTTGCCATCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAHHLGC*PLPSLV
Trigger: TACCAGCGATGGCAACGGCAAGCATCCAAGGTGGTG...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAAGTCAGTCAGTCGGTaGTCCCGCAGATCCACGTGG +
Preference number: 5 (lower is better)
Translates to: FSLASVRFRVICHNLRSRKSVSR*SRRSTW
Trigger: CCACGTGGATCTGCGGGACAACCGACTGACTGACTT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCCAGTGTTGGAAGGTTTaGCACATGATTGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GIGVYLHVALQINSTDTCQCWKV*HMIVSQ
Trigger: CTGGGACACAATCATGTGCAAAACCTTCCAACACTG...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTATTTCTGTCAAGTCGTaGCAACTTAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIISVKS*QLRSTN
Trigger: GTTTGTAGACCTAAGTTGCAACGACTTGACAGAAAT...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTTGGGGCCTCTGTCAGTTCCAGAACCAGATTaGTATTTCCAGTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: GRRPSPRRTPKKDLGPLSVPEPD*YFQSGQ
Trigger: TTGACCTGACTGGAAATACAAATCTGGTTCTGGAAC...TGACAGAGGCCCCAAATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNLVLHP*SLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATGTAATCACAGCACTTaGGGAGGCAGAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKCNHST*GGRGGW
Trigger: CCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTACA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAGAAGAAGAGCATCATTaGATATTCAGTAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPREEEHH*IFSRSA
Trigger: GGCAGATCTACTGAATATCAAATGATGCTCTTCTTC...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCAATTTCTGCTCCCATaGCGTTTCATATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTIQFLLP*RFIFLF
Trigger: GAAGAGAAATATGAAACGCAATGGGAGCAGAAATTG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567016.1
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACAATTTCTGCTCCCATaGCGTTTCATATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRQFLLP*RFIFLL
Trigger: CAAGAGAAATATGAAACGCAATGGGAGCAGAAATTG...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp GCTGAGACAGGAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGAAAGACTCCAGACTATTaGCAGATGCATTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: AETGEWLEPRDRGCSDPRKTPDY*QMHSSI
Trigger: GATACTTGAATGCATCTGCAAATAGTCTGGAGTCTT...TCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAAGCTACTGCACAGGCATaGGTGTTTACCTCCACGTGG +
Preference number: 5 (lower is better)
Translates to: LVFTSTWLCRSIAPTLAKATAQA*VFTSTW
Trigger: CCACGTGGAGGTAAACACCAATGCCTGTGCAGTAGC...TTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GTATTTCTCTTCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTAAGATCTTCAGTCTGTaGGCCTGTTGGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VFLFMLIPEHHGNGRRPSKIFSL*ACWLPL
Trigger: CAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTT...AGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGAAGAGAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCACACCTAAGAAGGATTaGGGGCCTCTGTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: GIGVYLHVALQINSTDTCTPKKD*GPLSVT
Trigger: TGTTACTGACAGAGGCCCCAAATCCTTCTTAGGTGT...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCTCTGAAGGACTGAATGGCTaGGCCAAGATGACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: TWLCRSIAPTLAKQERGSEGLNG*AKMTRQ
Trigger: CTGCCTTGTCATCTTGGCCAAGCCATTCAGTCCTTC...AGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS GCA 90 bp GAGACTTCTGTAACTCCATCCTGTCCTTGCTCATTGGCAGGAGCATaGCACTATTCACACTGTTCTGTCTTCGGATCCCAAAACACGACC +
Preference number: 5 (lower is better)
Translates to: ETSVTPSCPCSLAGA*HYSHCSVFGSQNTT
Trigger: GGTCGTGTTTTGGGATCCGAAGACAGAACAGTGTGAATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTTACAGAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CCA 90 bp GTTCCCACAATGCTTTGTTTCCCAGAATCAGCAACTCATCTTGAATaGTCAGCGGAGTGGAAGATATGTGGGGCTTGGGGAGGATCCAAG +
Preference number: 5 (lower is better)
Translates to: VPTMLCFPESATHLE*SAEWKICGAWGGSK
Trigger: CTTGGATCCTCCCCAAGCCCCACATATCTTCCACTCCGCTGACCATTCAAGATGAGTTGCTGATTCTGGGAAACAAAGCATTGTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAGAATGGCTTGAACCCAGGGACAGAGGCTGCAGTGACCCGAGACCCCACCATTCTTAAATCCACATGCTaGATATGGTTCATCCTATTC +
Preference number: 5 (lower is better)
Translates to: ENGLNPGTEAAVTRDPTILKSTC*IWFILF
Trigger: GAATAGGATGAACCATATCAAGCATGTGGATTTAAG...AATGGTGGGGTCTCGGGTCACTGCAGCCTCTGTCCCTGGGTTCAAGCCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTCAGTGTTGGAAGGTTTaGCACATGATTGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLQCWKV*HMIVSQ
Trigger: CTGGGACACAATCATGTGCAAAACCTTCCAACACTG...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATGGAATGGTTTTAAGCTaGTTGCCACTTAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: EHHGNGRRPSPRRTPKKDGMVLS*LPLRFS
Trigger: ACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCC...ATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp CCGACACTTGCAAAACAAGAGAGAGGCTCTATGCCCGCAAGGGTCTCACCTGGAGGAATGGTTTTAAGCTaGTTGCCACTTAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: PTLAKQERGSMPARVSPGGMVLS*LPLRFS
Trigger: ACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCC...TCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTCTTGTTTTGCAAGTGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGGGAAAATGCTGATGTaGTTGGAGTGTGCAACAAGG +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLGKMLM*LECATR
Trigger: CCTTGTTGCACACTCCAACAACATCAGCATTTTCCC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: QALVFTSTWLCRSIAPTLCDDGF*VLHPLS
Trigger: GCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACA...AAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCACCCCATTCACTTTGTaGTCCTCTGTGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCTPFTL*SSVMMA
Trigger: AGCCATCATCACAGAGGACAACAAAGTGAATGGGGT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTAATCAGCAACTCATCTaGAATGGTCAGCGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLNQQLI*NGQRSG
Trigger: TCCACTCCGCTGACCATTCAAGATGAGTTGCTGATT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTCACTGTCCAGGCCGTaGTCAGACTGGTTACTGGAG +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSLSRP*SDWLLE
Trigger: CTCCAGTAACCAGTCTGACAACGGCCTGGACAGTGA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAACTCCATCCTGTCCTaGCTCATTGGCAGGAGCATG +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMNSILS*LIGRSM
Trigger: CATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTGTAATCACAGCACTTaGGGAGGCAGAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNCNHST*GGRGGW
Trigger: CCACCCTCCTCTGCCTCCCAAAGTGCTGTGATTACA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGTGGCTCTCACACTTTTaGGCTCCGAGTTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMWLSHF*APSSTP
Trigger: TGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCCA...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCTGCCTCTAAGAAGATaGGCTCGAGTGCAGATTCAA +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCLPLRR*ARVQIQ
Trigger: TTGAATCTGCACTCGAGCCAATCTTCTTAGAGGCAG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TCGGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCTGTGGTTTCATGTGTTaGTTCTCACTTATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SDKKIFSLLACWLPLPRACGFMC*FSLIFP
Trigger: GGGGAAGATAAGTGAGAACAAACACATGAAACCACA...GGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS-3UTR CAA 90 bp GAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGACACCTAAGAAGGATTCAGTAAGGTCCTGGTaGAATAGACAAATCCATCCA +
Preference number: 5 (lower is better)
Translates to: EHHGNGRRPSPRRTPKKDSVRSW*NRQIHP
Trigger: TGGATGGATTTGTCTATTCAACCAGGACCTTACTGA...ATCCTTCTTAGGTGTCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GTGGCTGTTTCTCTGGGTCTGGGGGTCCTCACCATGGGTGTTTTACTCCAAGGACTGCTCTCGGTTCATTaGTATTTCTCTTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: VAVSLGLGVLTMGVLLQGLLSVH*YFSSCS
Trigger: TGAGCATGAAGAGAAATACAAATGAACCGAGAGCAG...TCCTTGGAGTAAAACACCCATGGTGAGGACCCCCAGACCCAGAGAAACAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS TCA 90 bp AAGTGTTCCCACAATGCTTTGTTTCCCAGAATCAGCAACTCATCTTaGATGGTCAGCGGAGTGGAAGATATGTGGGGCTTGGGGAGGATC +
Preference number: 5 (lower is better)
Translates to: KCSHNALFPRISNSS*MVSGVEDMWGLGRI
Trigger: GATCCTCCCCAAGCCCCACATATCTTCCACTCCGCTGACCATTCAAGATGAGTTGCTGATTCTGGGAAACAAAGCATTGTGGGAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CCA 90 bp TTCGTTCTCGCAGTGATAGTAGTTTTGTTGCCAATGGGCCAAATTTaGAGTCAGCCAGCCTGTTTCCAGATCTCCCCTCTGCCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FVLAVIVVLLPMGQI*SQPACFQISPLPFF
Trigger: AAAGAAGGGCAGAGGGGAGATCTGGAAACAGGCTGGCTGACTCCAAATTTGGCCCATTGGCAACAAAACTACTATCACTGCGAGAACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS CCA 90 bp CGTCCGCTCACCTCCCAGCCATGTTTTAATTCCCTTGCCTCCTCCTaGAGCAAAATTATCAGAATTCGGTGCTCTGCTTCAAGCAGTAAT +
Preference number: 5 (lower is better)
Translates to: RPLTSQPCFNSLASS*SKIIRIRCSASSSN
Trigger: ATTACTGCTTGAAGCAGAGCACCGAATTCTGATAATTTTGCTCCAGGAGGAGGCAAGGGAATTAAAACATGGCTGGGAGGTGAGCGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCCATCCATCATCTTCGTaGACCTCTCTTTTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCHPSSS*TSLFLV
Trigger: CACAAGGAAAAGAGAGGTCAACGAAGATGATGGATG...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCTTGGATGCTTGCCGTaGCCATCGCTGGTACTCGGC +
Preference number: 5 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQLGCLP*PSLVLG
Trigger: GCCGAGTACCAGCGATGGCAACGGCAAGCATCCAAG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAAGTCAGTCAGTCGGTaGTCCCGCAGATCCACGTGG +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNKSVSR*SRRSTW
Trigger: CCACGTGGATCTGCGGGACAACCGACTGACTGACTT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCATACTTCTATCTTCTTaGCTTCACAGGCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCILLSS*LHRPSQ
Trigger: CTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTAT...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTGTGCTCTACCAGTGTaGGAAGGTTTTGCACATGAT +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLCALPV*EGFAHD
Trigger: ATCATGTGCAAAACCTTCCAACACTGGTAGAGCACA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATATGGTTTTAAGCTTGTaGCCACTTAGGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GQEDLQSVGLLASSASCHMVLSL*PLRFSS
Trigger: GGAACTGAACCTAAGTGGCAACAAGCTTAAAACCAT...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCTCTGCAGCCTTTTACAGTTaGCTATGGTTGTGGGAATGG +
Preference number: 5 (lower is better)
Translates to: TWLCRSIAPTLAKQERGSAAFYS*LWLWEW
Trigger: CCATTCCCACAACCATAGCAAACTGTAAAAGGCTGC...AGAGCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTAAAATGCTGATGTTGTaGGAGTGTGCAACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: DKKIFSLLACWLPLPRAIKMLML*ECATRV
Trigger: CACCCTTGTTGCACACTCCAACAACATCAGCATTTT...AATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTAAAATGCTGATGTTGTaGGAGTGTGCAACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLKMLML*ECATRV
Trigger: CACCCTTGTTGCACACTCCAACAACATCAGCATTTT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGGCTTAGGGGCATCCTaGATAGTGGTGGTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAGLGAS*IVVVEA
Trigger: TGCTTCAACCACCACTATCAAGGATGCCCCTAAGCC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATTCTACCTTGCTGCCATaGGTTATGACCCCCTCAACG +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNSTLLP*VMTPST
Trigger: CGTTGAGGGGGTCATAACCAATGGCAGCAAGGTAGA...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCTCCTGTCCTTGCTCATaGGCAGGAGCATGCCACTAT +
Preference number: 5 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPSCPCS*AGACHY
Trigger: ATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGA...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTAACTCCATCCTGTCCTaGCTCATTGGCAGGAGCATG +
Preference number: 5 (lower is better)
Translates to: FSLASVRFRVICHNLRSRNSILS*LIGRSM
Trigger: CATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGTCCAAGTACCGGCTTTaGCTGAAGGTCTACATGGGA +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMSKYRL*LKVYMG
Trigger: TCCCATGTAGACCTTCAGCAAAAGCCGGTACTTGGA...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGCCAATGGGCCAAATTaGGAGTCAGCCAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSANGPN*ESASLF
Trigger: AAACAGGCTGGCTGACTCCAAATTTGGCCCATTGGC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp GCGAGCTCTCAACTCACCTCCAACATTCTAGAGAACCATCCCTCTCCTCCAGCACGTTTCATATTTCTCTaGGCAAGGCCTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ASSQLTSNILENHPSPPARFIFL*ARPFLF
Trigger: GAAGAGAAAAGGCCTTGCCAAGAGAAATATGAAACG...TGCTGGAGGAGAGGGATGGTTCTCTAGAATGTTGGAGGTGAGTTGAGAGCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATCTGAGATTTAAGGCCTaGGAGAAGAGGGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNLRFKA*EKRVSG
Trigger: GCCAGACACCCTCTTCTCCAAGGCCTTAAATCTCAG...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCATGCTCATCCCTGAACACCACGGGAATGGCAGGAGACCCTCTCCCAGAAGGATCCAATTTATTTAGTTaGCTTGCAGGAAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: SCSSLNTTGMAGDPLPEGSNLFS*LAGKVC
Trigger: ACAGACCTTTCCTGCAAGCAAACTAAATAAATTGGA...TCCTTCTGGGAGAGGGTCTCCTGCCATTCCCGTGGTGTTCAGGGATGAGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp TCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTTCAGTAAGGTCCTGGTaGAATAGACAAATCCATCCA +
Preference number: 5 (lower is better)
Translates to: SVCWPVGFLCLVPFVGSFSVRSW*NRQIHP
Trigger: TGGATGGATTTGTCTATTCAACCAGGACCTTACTGA...AAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACTGAATGGCTTGGCCAAGATGACAAGGCAGTAAAAAGCGGGGACTTGAACCTGACACCTAAGAAGGATTaGGGGCCTCTGTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: TEWLGQDDKAVKSGDLNLTPKKD*GPLSVT
Trigger: TGTTACTGACAGAGGCCCCAAATCCTTCTTAGGTGT...CAGGTTCAAGTCCCCGCTTTTTACTGCCTTGTCATCTTGGCCAAGCCATTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCCTGCTCTCGGTTCATTaGTATTTCTCTTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: GIGVYLHVALQINSTDTCLLSVH*YFSSCS
Trigger: TGAGCATGAAGAGAAATACAAATGAACCGAGAGCAG...GCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS TCA 90 bp ATTTCTCTGCCCTGCCATCTCAGCCAGTCCATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGTGGTTGGCAAAGGTTTCTGATCAAT +
Preference number: 5 (lower is better)
Translates to: ISLPCHLSQSMAPEG*RNCRICGWQRFLIN
Trigger: ATTGATCAGAAACCTTTGCCAACCACAGATTCTACAGTTACGTCAACCTTCTGGAGCCATGGACTGGCTGAGATGGCAGGGCAGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 90 bp TGGTCAGATAAAGCAGCTGCAGCATACTCAAACTCTCCTCTCCAGTaGAGGCGGATGGTAAAGACTCCAGACTATTTGCAGATGCATTCA +
Preference number: 5 (lower is better)
Translates to: WSDKAAAAYSNSPLQ*RRMVKTPDYLQMHS
Trigger: TGAATGCATCTGCAAATAGTCTGGAGTCTTTACCATCCGCCTGCACTGGAGAGGAGAGTTTGAGTATGCTGCAGCTGCTTTATCTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGAAAGCAAGGGAGTATaGCCGTCGCTTCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSESKGV*PSLHFF
Trigger: GAAGAAGTGAAGCGACGGCAATACTCCCTTGCTTTC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGGCATTGGTGTTTACCTCCACGTGGCTCTGCAGATCAATAGCACCGACACTAAAGTAGTCAGAAAGTaGCCATCAAGACAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: TGIGVYLHVALQINSTDTKVVRK*PSRQRV
Trigger: AACCCTCTGTCTTGATGGCAACTTTCTGACTACTTT...AGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGAGGTAAACACCAATGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGCAGTGTTGGAAGGTTTaGCACATGATTGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMQCWKV*HMIVSQ
Trigger: CTGGGACACAATCATGTGCAAAACCTTCCAACACTG...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCCACGTGGCTCTGCAGATCAATAGCACCGACACTTGCAAAACAAGAGAGAGGCATGGTTTTAAGCTTGTaGCCACTTAGGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: STWLCRSIAPTLAKQERGMVLSL*PLRFSS
Trigger: GGAACTGAACCTAAGTGGCAACAAGCTTAAAACCAT...GCCTCTCTCTTGTTTTGCAAGTGTCGGTGCTATTGATCTGCAGAGCCACGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTATGGTTTTAAGCTTGTaGCCACTTAGGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLMVLSL*PLRFSS
Trigger: GGAACTGAACCTAAGTGGCAACAAGCTTAAAACCAT...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGGGAAAATGCTGATGTaGTTGGAGTGTGCAACAAGG +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMGKMLM*LECATR
Trigger: CCTTGTTGCACACTCCAACAACATCAGCATTTTCCC...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GGACAAGAAGATCTTCAGTCTGTTGGCCTGTTGGCTTCCTCTGCCTCGTGCCATATTTCTGTCAAGTCGTaGCAACTTAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: GQEDLQSVGLLASSASCHISVKS*QLRSTN
Trigger: GTTTGTAGACCTAAGTTGCAACGACTTGACAGAAAT...ATGGCACGAGGCAGAGGAAGCCAACAGGCCAACAGACTGAAGATCTTCTTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS-3UTR CAA 90 bp GGAGGTACACACAGAGACCTGAGAATATGCAGAGGCCAGAATCTCTGTCTGTGCGTTCCAGAACCAGATTaGTATTTCCAGTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: GGTHRDLRICRGQNLCLCVPEPD*YFQSGQ
Trigger: TTGACCTGACTGGAAATACAAATCTGGTTCTGGAAC...GCACAGACAGAGATTCTGGCCTCTGCATATTCTCAGGTCTCTGTGTGTACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCATGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSWHVPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCA...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAAATCAGCAACTCATCTaGAATGGTCAGCGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKNQQLI*NGQRSG
Trigger: TCCACTCCGCTGACCATTCAAGATGAGTTGCTGATT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAACTTCCACCTCTACCTaGCTGCCATTGGTTATGACC +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIATSTST*LPLVMT
Trigger: GGTCATAACCAATGGCAGCAAGGTAGAGGTGGAAGT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGATCCATCTGTTCTCATaGGCCTCAGTCCGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMIHLFS*ASVRFR
Trigger: TCTGAAACGGACTGAGGCCAATGAGAACAGATGGAT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GGCCTGTTGGCTTCCTCTGCCTCGTGCCATTTGTGGGTTCCTTTCAGTCCAAATAAGACTCCAGACTATTaGCAGATGCATTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: GLLASSASCHLWVPFSPNKTPDY*QMHSSI
Trigger: GATACTTGAATGCATCTGCAAATAGTCTGGAGTCTT...ATTTGGACTGAAAGGAACCCACAAATGGCACGAGGCAGAGGAAGCCAACAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS GCA 90 bp AGGCAACTGCAGTATTTCTGGGAAAATGCTGATGTTGTTGGAGTGTaGAACAAGGGTGTGCAGCCTTTTACAGTTTGCTATGGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: RQLQYFWENADVVGV*NKGVQPFTVCYGCG
Trigger: CCCACAACCATAGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACACTCCAACAACATCAGCATTTTCCCAGAAATACTGCAGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 90 bp GAGCTAAGATCCAAGTCAGTCAGTCGGTTGTCCCGCAGATCCACGTaGGTGATGTGTTTATTTCCCTCCAGATTTTCAATAACCATGGTT +
Preference number: 5 (lower is better)
Translates to: ELRSKSVSRLSRRST*VMCLFPSRFSITMV
Trigger: AACCATGGTTATTGAAAATCTGGAGGGAAATAAACACATCACCCACGTGGATCTGCGGGACAACCGACTGACTGACTTGGATCTTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTGATTGCCAATTTGACTaGGTAGGTCATGAAATCCAT +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLDCQFD*VGHEIH
Trigger: ATGGATTTCATGACCTACCAAGTCAAATTGGCAATC...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGCAGCCTTTTACAGTTaGCTATGGTTGTGGGAATGG +
Preference number: 5 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPAAFYS*LWLWEW
Trigger: CCATTCCCACAACCATAGCAAACTGTAAAAGGCTGC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGC +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFISAQDC*ARANIG
Trigger: GCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTLVLHP*SLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAACCCCATTCACTTTGTaGTCCTCTGTGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSTPFTL*SSVMMA
Trigger: AGCCATCATCACAGAGGACAACAAAGTGAATGGGGT...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAATGTTCCCACAATGCTTaGTTTCCCAGAATCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKCSHNA*FPRISN
Trigger: GTTGCTGATTCTGGGAAACAAAGCATTGTGGGAACA...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGTGTTCCCACAATGCTTaGTTTCCCAGAATCAGCAAC +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMCSHNA*FPRISN
Trigger: GTTGCTGATTCTGGGAAACAAAGCATTGTGGGAACA...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGGCTTAGGGGCATCCTaGATAGTGGTGGTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNGLGAS*IVVVEA
Trigger: TGCTTCAACCACCACTATCAAGGATGCCCCTAAGCC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTGGCTCTCACACTTTTaGGCTCCGAGTTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNWLSHF*APSSTP
Trigger: TGGGGTTGAACTCGGAGCCAAAAAGTGTGAGAGCCA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAATCCATCTGTTCTCATaGGCCTCAGTCCGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSIHLFS*ASVRFR
Trigger: TCTGAAACGGACTGAGGCCAATGAGAACAGATGGAT...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAAAGTATCCCCTCCTTTaGTGGAGCACTTCACATCTA +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAKYPLL*WSTSHL
Trigger: TAGATGTGAAGTGCTCCACAAAAGGAGGGGATACTT...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCACCACCTTGGATGCTaGCCGTTGCCATCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIHHLGC*PLPSLV
Trigger: TACCAGCGATGGCAACGGCAAGCATCCAAGGTGGTG...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp GTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGAAAGTAGTCAGAAAGTaGCCATCAAGACAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VKLNTDSGYQFIQSQPLMKVVRK*PSRQRV
Trigger: AACCCTCTGTCTTGATGGCAACTTTCTGACTACTTT...CATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAATGGTTTTAAGCTTGTaGCCACTTAGGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKMVLSL*PLRFSS
Trigger: GGAACTGAACCTAAGTGGCAACAAGCTTAAAACCAT...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAAGGAATGGTTTTAAGCTaGTTGCCACTTAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKGMVLS*LPLRFS
Trigger: ACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCC...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCGTTACCCCATTCACTTaGTTGTCCTCTGTGATGATG +
Preference number: 5 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPVTPFT*LSSVMM
Trigger: CATCATCACAGAGGACAACAAAGTGAATGGGGTAAC...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTTGTTCCCACAATGCTTaGTTTCCCAGAATCAGCAAC +
Preference number: 5 (lower is better)
Translates to: FSLASVRFRVICHNLRSRCSHNA*FPRISN
Trigger: GTTGCTGATTCTGGGAAACAAAGCATTGTGGGAACA...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTCACTGTCCAGGCCGTaGTCAGACTGGTTACTGGAG +
Preference number: 5 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTSLSRP*SDWLLE
Trigger: CTCCAGTAACCAGTCTGACAACGGCCTGGACAGTGA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGCAAACAGAGCAGGATaGACTGTAGCTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSANRAG*TVAAFS
Trigger: AGAAAAAGCAGCTACAGTCAATCCTGCTCTGTTTGC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGCAAACAGAGCAGGATaGACTGTAGCTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIAANRAG*TVAAFS
Trigger: AGAAAAAGCAGCTACAGTCAATCCTGCTCTGTTTGC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCCCCTGATGGCTCTCACACTTTCCAATTTATTTAGTTaGCTTGCAGGAAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: TDSGYQFIQSQPLMALTLSNLFS*LAGKVC
Trigger: ACAGACCTTTCCTGCAAGCAAACTAAATAAATTGGA...AAGTGTGAGAGCCATCAGGGGCTGGCTCTGGATAAACTGGTAGCCACTATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS GCA 90 bp GATACCAAGAAGGTGTTAGCCATGAAAACTGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGCACATCTGCCATCGTACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: DTKKVLAMKTVSLVD*CTSSKSTSAIVHCS
Trigger: GCTGCAGTGTACGATGGCAGATGTGCTTTTAGAAGAGGTACAGCAGTCAACTAATGACACAGTTTTCATGGCTAACACCTTCTTGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 90 bp TTTAATTCCCTTGCCTCCTCCTGGAGCAAAATTATCAGAATTCGGTaGTCTGCTTCAAGCAGTAATATGGCCTGTGACCCGGTTTATGAT +
Preference number: 5 (lower is better)
Translates to: FNSLASSWSKIIRIR*SASSSNMACDPVYD
Trigger: ATCATAAACCGGGTCACAGGCCATATTACTGCTTGAAGCAGAGCACCGAATTCTGATAATTTTGCTCCAGGAGGAGGCAAGGGAATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATATGGTTTTAAGCTTGTaGCCACTTAGGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNMVLSL*PLRFSS
Trigger: GGAACTGAACCTAAGTGGCAACAAGCTTAAAACCAT...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNCDDGF*VLHPLS
Trigger: GCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACA...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTTCCTGTCCTTGCTCATaGGCAGGAGCATGCCACTAT +
Preference number: 5 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTSCPCS*AGACHY
Trigger: ATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGA...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAGACAGGAGAATGGCTaGAACCCAGGGACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIRQENG*NPGTEA
Trigger: AGCCTCTGTCCCTGGGTTCAAGCCATTCTCCTGTCT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTCAGATTCTCGAGGGGTaGAACATTAGACATCCATTA +
Preference number: 5 (lower is better)
Translates to: FSLASVRFRVICHNLRSRQILEG*NIRHPL
Trigger: TAATGGATGTCTAATGTTCAACCCCTCGAGAATCTG...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTAAATCAACTTCACAGGGCCCTTCCTATACCCTCGAATAAGTCTCCAACACCCCAGATTCTCGAGGGGTaGAACATTAGACATCCATTA +
Preference number: 5 (lower is better)
Translates to: LNQLHRALPIPSNKSPTPQILEG*NIRHPL
Trigger: TAATGGATGTCTAATGTTCAACCCCTCGAGAATCTG...GGGTGTTGGAGACTTATTCGAGGGTATAGGAAGGGCCCTGTGAAGTTGATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CCAATTCCTCCACATGCTAGGGAAAGACGCCAATCCCTAAATTTCCCTGGGAAACACACAGAACAACATTaGGAATTACAGAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PIPPHARERRQSLNFPGKHTEQH*ELQSSA
Trigger: AGCAGAACTCTGTAATTCCAAATGTTGTTCTGTGTG...TTTCCCAGGGAAATTTAGGGATTGGCGTCTTTCCCTAGCATGTGGAGGAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CTGTTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCAGCAGTGATAGTAGTTTaGTTGCCAATGGGCCAAATT +
Preference number: 5 (lower is better)
Translates to: LFSLASVRFRVICHNLRSAVIVV*LPMGQI
Trigger: AATTTGGCCCATTGGCAACAAAACTACTATCACTGC...TGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS TCA 90 bp AGTAGGACAAAGGAACAGGAAGATGAACACAACCTTTTGAGTCAGTaGGTAGCAAAGCAGTCACAACAGTACCATGTCCAGAGTATAAGG +
Preference number: 5 (lower is better)
Translates to: SRTKEQEDEHNLLSQ*VAKQSQQYHVQSIR
Trigger: CCTTATACTCTGGACATGGTACTGTTGTGACTGCTTTGCTACTCACTGACTCAAAAGGTTGTGTTCATCTTCCTGTTCCTTTGTCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS GCA 90 bp ATATTTCTCTTGGCAAGGCCTTTTCTCTTCCTTATCAGAGATGCGTaGGACCTTCTTAAGCAAATTCAACCCAACCTCGTACAAAACGTC +
Preference number: 5 (lower is better)
Translates to: IFLLARPFLFLIRDA*DLLKQIQPNLVQNV
Trigger: GACGTTTTGTACGAGGTTGGGTTGAATTTGCTTAAGAAGGTCGCACGCATCTCTGATAAGGAAGAGAAAAGGCCTTGCCAAGAGAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTCCATTACAGGAAAGGTaGAGCTCAGTCAGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTPLQER*SSVRVE
Trigger: CTCTACCCTGACTGAGCTCAACCTTTCCTGTAATGG...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp ACAGAACAGCTGCTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGATTGCCAATTTGACTaGGTAGGTCATGAAATCCAT +
Preference number: 5 (lower is better)
Translates to: TEQLLSSQYPWEFQCRLNDCQFD*VGHEIH
Trigger: ATGGATTTCATGACCTACCAAGTCAAATTGGCAATC...ATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAGCAGCTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCAGATTGCCAATTTGACTaGGTAGGTCATGAAATCCAT +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIADCQFD*VGHEIH
Trigger: ATGGATTTCATGACCTACCAAGTCAAATTGGCAATC...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCAGTGTTGGAAGGTTTaGCACATGATTGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQQCWKV*HMIVSQ
Trigger: CTGGGACACAATCATGTGCAAAACCTTCCAACACTG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGGCAGCCTTTTACAGTTaGCTATGGTTGTGGGAATGG +
Preference number: 5 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQAAFYS*LWLWEW
Trigger: CCATTCCCACAACCATAGCAAACTGTAAAAGGCTGC...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACAAAATGCTGATGTTGTaGGAGTGTGCAACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNKMLML*ECATRV
Trigger: CACCCTTGTTGCACACTCCAACAACATCAGCATTTT...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCTCATTGGCCTCAGTCCGTTTCAGAGTCATCTGCCATAACTTAAGGTCACGTATTTCTGTCAAGTCGTaGCAACTTAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: FSLASVRFRVICHNLRSRISVKS*QLRSTN
Trigger: GTTTGTAGACCTAAGTTGCAACGACTTGACAGAAAT...ACGTGACCTTAAGTTATGGCAGATGACTCTGAAACGGACTGAGGCCAATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGGAATGGTTTTAAGCTaGTTGCCACTTAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNGMVLS*LPLRFS
Trigger: ACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGTTCCAGAACCAGATTaGTATTTCCAGTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNVPEPD*YFQSGQ
Trigger: TTGACCTGACTGGAAATACAAATCTGGTTCTGGAAC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp CTTTCTTCCCAGTACCCCTGGGAATTCCAATGCAGGTTAAATGTGAAACTTAACGTGATAGTAGTTTTGTaGCCAATGGGCCAAATTTGG +
Preference number: 5 (lower is better)
Translates to: LSSQYPWEFQCRLNVKLNVIVVL*PMGQIW
Trigger: CCAAATTTGGCCCATTGGCAACAAAACTACTATCAC...GTTAAGTTTCACATTTAACCTGCATTGGAATTCCCAGGGGTACTGGGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp CAACTGGCTCCATCTCCTGGAAAACAGCACTCACTACAAGCAACTGTAATAGCATCCAATTTATTTAGTTaGCTTGCAGGAAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: QLAPSPGKQHSLQATVIASNLFS*LAGKVC
Trigger: ACAGACCTTTCCTGCAAGCAAACTAAATAAATTGGA...TGCTATTACAGTTGCTTGTAGTGAGTGCTGTTTTCCAGGAGATGGAGCCAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS TCA 90 bp CAGAAGGTTGACGTAACTGTAGAATCTGTGGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTGATATGGCTAAATATGTCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: QKVDVTVESVVGKGF*SIFRVVIWLNMSSV
Trigger: GACACTGGACATATTTAGCCATATCACAACCCTGAAAATTGATCAGAAACCTTTGCCAACCACAGATTCTACAGTTACGTCAACCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 90 bp AAGGAAGGTGTGGTAAAGAATAACCTTACCTTAAATCCACATGCTTaGTATGGTTCATCCTATTCAGCACCCCTAAGTTCAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: KEGVVKNNLTLNPHA*YGSSYSAPLSSGLP
Trigger: TGGAAGTCCTGAACTTAGGGGTGCTGAATAGGATGAACCATATCAAGCATGTGGATTTAAGGTAAGGTTATTCTTTACCACACCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS GCA 90 bp CTCTTTCTCGAGAACCAAACCTACTTCTCCTATTCAAACAATTTCTaGTCCCATTGCGTTTCATATTTCTCTTGGCAAGGCCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LFLENQTYFSYSNNF*SHCVSYFSWQGLFS
Trigger: AGAGAAAAGGCCTTGCCAAGAGAAATATGAAACGCAATGGGAGCAGAAATTGTTTGAATAGGAGAAGTAGGTTTGGTTCTCGAGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGAAAGTAGTCAGAAAGTaGCCATCAAGACAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQKVVRK*PSRQRV
Trigger: AACCCTCTGTCTTGATGGCAACTTTCTGACTACTTT...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGAGTTTGTTTAAGGCCTaGGAGAAGAGGGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQSLFKA*EKRVSG
Trigger: GCCAGACACCCTCTTCTCCAAGGCCTTAAACAAACT...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS-3UTR CAA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGTGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQWHVPT*ATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCA...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFICDDGF*VLHPLS
Trigger: GCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACA...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGACTTCCACCTCTACCTaGCTGCCATTGGTTATGACC +
Preference number: 5 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQTSTST*LPLVMT
Trigger: GGTCATAACCAATGGCAGCAAGGTAGAGGTGGAAGT...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCATACTTCTATCTTCTTaGCTTCACAGGCCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIILLSS*LHRPSQ
Trigger: CTGACTGGGCCTGTGAAGCAAAGAAGATAGAAGTAT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGTTACCCCATTCACTTaGTTGTCCTCTGTGATGATG +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIVTPFT*LSSVMM
Trigger: CATCATCACAGAGGACAACAAAGTGAATGGGGTAAC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp AGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCAGAGCCAGCTTAAATCCACATGCTaGATATGGTTCATCCTATTC +
Preference number: 5 (lower is better)
Translates to: RLNVKLNTDSGYQFIQSQLKSTC*IWFILF
Trigger: GAATAGGATGAACCATATCAAGCATGTGGATTTAAG...CTGGCTCTGGATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGTGTGCTCTACCAGTGTaGGAAGGTTTTGCACATGAT +
Preference number: 5 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQCALPV*EGFAHD
Trigger: ATCATGTGCAAAACCTTCCAACACTGGTAGAGCACA...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCGGAATGGTTTTAAGCTaGTTGCCACTTAGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIGMVLS*LPLRFS
Trigger: ACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCC...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp ACACTTCACAGTAGTACAATAAAGCCCTGTATCAGGAGTGGTAATTCAATGACTGAAGAAGAGCATCATTaGATATTCAGTAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: TLHSSTIKPCIRSGNSMTEEEHH*IFSRSA
Trigger: GGCAGATCTACTGAATATCAAATGATGCTCTTCTTC...AGTCATTGAATTACCACTCCTGATACAGGGCTTTATTGTACTACTGTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGCATGTTTTAATTCCCTaGCCTCCTCCTGGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQHVLIP*PPPGAK
Trigger: TTTTGCTCCAGGAGGAGGCAAGGGAATTAAAACATG...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS CCA 90 bp TACGAACAGTTAAACACTTATATCCAAATACCTAATAATGTCAGGTaGGCACTAAGTAGGACAAAGGAACAGGAAGATGAACACAACCTT +
Preference number: 5 (lower is better)
Translates to: YEQLNTYIQIPNNVR*ALSRTKEQEDEHNL
Trigger: AAGGTTGTGTTCATCTTCCTGTTCCTTTGTCCTACTTAGTGCCCACCTGACATTATTAGGTATTTGGATATAAGTGTTTAACTGTTCGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCATTTCTGTCAAGTCGTaGCAACTTAGGTCTACAAAC +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIISVKS*QLRSTN
Trigger: GTTTGTAGACCTAAGTTGCAACGACTTGACAGAAAT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TCTTATGTTAGTATTGAGCCCAGTATTCTGAAACCACATAAAGTGAATATGCAGGTTCCAGAACCAGATTaGTATTTCCAGTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: SYVSIEPSILKPHKVNMQVPEPD*YFQSGQ
Trigger: TTGACCTGACTGGAAATACAAATCTGGTTCTGGAAC...CTGCATATTCACTTTATGTGGTTTCAGAATACTGGGCTCAATACTAACATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393524.6
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCAAGACTCCAGACTATTaGCAGATGCATTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFIKTPDY*QMHSSI
Trigger: GATACTTGAATGCATCTGCAAATAGTCTGGAGTCTT...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TTCCAATGCAGGTTAAATGTGAAACTTAACACTGATAGTGGCTACCAGTTTATCCTTAAATCCACATGCTaGATATGGTTCATCCTATTC +
Preference number: 5 (lower is better)
Translates to: FQCRLNVKLNTDSGYQFILKSTC*IWFILF
Trigger: GAATAGGATGAACCATATCAAGCATGTGGATTTAAG...GATAAACTGGTAGCCACTATCAGTGTTAAGTTTCACATTTAACCTGCATTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS-3UTR CAA 90 bp TGGTTGAATAGACAAATCCATCCATACAATGAAGTCGAAGGCCACTTAACAAAACTTAAATCCACATGCTaGATATGGTTCATCCTATTC +
Preference number: 5 (lower is better)
Translates to: WLNRQIHPYNEVEGHLTKLKSTC*IWFILF
Trigger: GAATAGGATGAACCATATCAAGCATGTGGATTTAAG...TTTTGTTAAGTGGCCTTCGACTTCATTGTATGGATGGATTTGTCTATTCAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS-3UTR CAA 90 bp TGGTTGAATAGACAAATCCATCCATACAATGAAGTCGAAGGCCACTTAACAAAATCCAATTTATTTAGTTaGCTTGCAGGAAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: WLNRQIHPYNEVEGHLTKSNLFS*LAGKVC
Trigger: ACAGACCTTTCCTGCAAGCAAACTAAATAAATTGGA...TTTTGTTAAGTGGCCTTCGACTTCATTGTATGGATGGATTTGTCTATTCAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564884.5
ENST00000568004.5
CDS CCA 72 bp TCGAACTCCTCCGGGGGCTCGGTCCGATCCTCTTCATaGGGCTCAGGCTCGAGCCGGCTGTCCTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: SNSSGGSVRSSS*GSGSSRLSWCC
Trigger: ACAGCACCAGGACAGCCGGCTCGAGCCTGAGCCCCATGAAGAGGATCGGACCGAGCCCCCGGAGGAGTTCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 72 bp AGAGAGGGGCACTGGCTTCCCACCTCGGCACAGGACTaGTTGGCACGTGCCAACATTGGCTACAGTCAAGCT +
Preference number: 6 (lower is better)
Translates to: REGHWLPTSAQD*LARANIGYSQA
Trigger: AGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 72 bp AGGTGGGAGAATCGCCTGAGAACGGGAGGTCAAGACTaGAGTGGGCCGAGATCGTGCCACTGTATGCCAGCT +
Preference number: 6 (lower is better)
Translates to: RWENRLRTGGQD*SGPRSCHCMPA
Trigger: AGCTGGCATACAGTGGCACGATCTCGGCCCACTGCAGTCTTGACCTCCCGTTCTCAGGCGATTCTCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS CCA 72 bp GGAGAATCGCCTGAGAACGGGAGGTCAAGACTGCAGTaGGCCGAGATCGTGCCACTGTATGCCAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: GESPENGRSRLQ*AEIVPLYASLG
Trigger: ACCCAAGCTGGCATACAGTGGCACGATCTCGGCCCACTGCAGTCTTGACCTCCCGTTCTCAGGCGATTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS TCA 72 bp AGTGGCTGGCTTAGGGGCATCCTTGATAGTGGTGGTTaGAGCAAATCCCACAGGACCTGGGAGGGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SGWLRGILDSGG*SKSHRTWEGEP
Trigger: GGGCTCACCCTCCCAGGTCCTGTGGGATTTGCTTCAACCACCACTATCAAGGATGCCCCTAAGCCAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 72 bp TGGTTACTGGAGAAGGTAGCAGAAGAAGGCTGGCGCTaGAACAGCCCAGAGGTGGGTGTTGGGTGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: WLLEKVAEEGWR*NSPEVGVGWRL
Trigger: CAGCCTCCACCCAACACCCACCTCTGGGCTGTTTCAGCGCCAGCCTTCTTCTGCTACCTTCTCCAGTAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 72 bp CTGATTCGCTGGGACACCACCTTGGATGCTTGCCGTTaGCATCGCTGGTACTCGGCCAAAGTCTCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LIRWDTTLDACR*HRWYSAKVSKL
Trigger: CAGCTTCGAGACTTTGGCCGAGTACCAGCGATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGCGAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000538126.5
ENST00000567016.1
ENST00000568954.5
ENST00000574977.1
CDS CCA 72 bp AGGGGCACTGGCTTCCCACCTCGGCACAGGACTGCTTaGCACGTGCCAACATTGGCTACAGTCAAGCTAAAG +
Preference number: 6 (lower is better)
Translates to: RGTGFPPRHRTA*HVPTLATVKLK
Trigger: CTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp GAGGGGCACTGGCTTCCCACCTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGCTACAGTCAAGCTAAA +
Preference number: 6 (lower is better)
Translates to: EGHWLPTSAQDC*ARANIGYSQAK
Trigger: TTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 90 bp GCAATCCCACTGCTAGAGGATGGAGTGGCTGGCTTAGGGGCATCCTaGATAGTGGTGGTTGAAGCAAATCCCACAGGACCTGGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: AIPLLEDGVAGLGAS*IVVVEANPTGPGRV
Trigger: CACCCTCCCAGGTCCTGTGGGATTTGCTTCAACCACCACTATCAAGGATGCCCCTAAGCCAGCCACTCCATCCTCTAGCAGTGGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 90 bp GTTATGACCCCCTCAACGGGCTGGTCATCATCACTGTCCAGGCCGTaGTCAGACTGGTTACTGGAGAAGGTAGCAGAAGAAGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: VMTPSTGWSSSLSRP*SDWLLEKVAEEGWR
Trigger: GCGCCAGCCTTCTTCTGCTACCTTCTCCAGTAACCAGTCTGACAACGGCCTGGACAGTGATGATGACCAGCCCGTTGAGGGGGTCATAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 72 bp GTTGCCATCGCTGGTACTCGGCCAAAGTCTCGAAGCTaGCATGATAGGTCTGAGCTTGGGCTCCTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: VAIAGTRPKSRS*HDRSELGLLLS
Trigger: GCTCAGCAGGAGCCCAAGCTCAGACCTATCATGTCAGCTTCGAGACTTTGGCCGAGTACCAGCGATGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000538126.5
ENST00000567016.1
ENST00000568954.5
ENST00000574977.1
CDS TCA 72 bp CCTCCTCGAGGCTGTAACACGAGAGATCCACGGTACTaGTTCGCTGGGACACCACCTTGGATGCTTGCCGTT +
Preference number: 6 (lower is better)
Translates to: PPRGCNTRDPRY*FAGTPPWMLAV
Trigger: AACGGCAAGCATCCAAGGTGGTGTCCCAGCGAATCAGTACCGTGGATCTCTCGTGTTACAGCCTCGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000538126.5
ENST00000567016.1
ENST00000568954.5
ENST00000574977.1
CDS TCA 72 bp AAGAGGGTGTCTGGCAGCCTCGTGAGTGCATTATGCTaGAGATCCAGCACCTCGAGGGGGATGTGCTCTACC +
Preference number: 6 (lower is better)
Translates to: KRVSGSLVSALC*RSSTSRGMCST
Trigger: GGTAGAGCACATCCCCCTCGAGGTGCTGGATCTTCAGCATAATGCACTCACGAGGCTGCCAGACACCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 72 bp GGCGCGGGAGCTCCTCATTTCGGTCTCCATCAAACATaGCATACACAGCTCCCACCCCCTCTGCAAAGCTAT +
Preference number: 6 (lower is better)
Translates to: GAGAPHFGLHQT*HTQLPPPLQSY
Trigger: ATAGCTTTGCAGAGGGGGTGGGAGCTGTGTATGGCATGTTTGATGGAGACCGAAATGAGGAGCTCCCGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp ACTGATTCGCTGGGACACCACCTTGGATGCTTGCCGTaGCCATCGCTGGTACTCGGCCAAAGTCTCGAAGCT +
Preference number: 6 (lower is better)
Translates to: TDSLGHHLGCLP*PSLVLGQSLEA
Trigger: AGCTTCGAGACTTTGGCCGAGTACCAGCGATGGCAACGGCAAGCATCCAAGGTGGTGTCCCAGCGAATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000538126.5
ENST00000567016.1
ENST00000568954.5
ENST00000574977.1
CDS CAA 90 bp ACTGGCTTCCCACCTCGGCACAGGACTGCTTGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAGCTACTTGCTGGATCGGCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: TGFPPRHRTAWHVPT*ATVKLKLLAGSAVS
Trigger: TGACACTGCCGATCCAGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 90 bp GACTTTAGAGAGGGGCACTGGCTTCCCACCTCGGCACAGGACTGCTaGGCACGTGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGC +
Preference number: 6 (lower is better)
Translates to: DFREGHWLPTSAQDC*ARANIGYSQAKATC
Trigger: GCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGGGAAGCCAGTGCCCCTCTCTAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp CGAAGGGAAAAGCCACTGAGTGTTAGCTCCCTCAGCTaGTTCCGCCCACAGTGCAGCTGTTCCAAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: RREKPLSVSSLS*FRPQCSCSKLH
Trigger: ATGCAGCTTGGAACAGCTGCACTGTGGGCGGAATCAGCTGAGGGAGCTAACACTCAGTGGCTTTTCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp GATGGCTTTTTGGTCCTTCACCCTTTGAGCCTCCTCTaGGTCCTGCTCCAGGCTGAAGACTTTAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: DGFLVLHPLSLL*VLLQAEDFREG
Trigger: CCCCTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp CCACCTCGGCACAGGACTGCTTGGCACGTGCCAACATaGGCTACAGTCAAGCTAAAGCTACTTGCTGGATCG +
Preference number: 6 (lower is better)
Translates to: PPRHRTAWHVPT*ATVKLKLLAGS
Trigger: CGATCCAGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACGTGCCAAGCAGTCCTGTGCCGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp TGGTGGTTGAAGCAAATCCCACAGGACCTGGGAGGGTaGGCCCATTCATTTCACAAGTGCAGCCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: WWLKQIPQDLGG*AHSFHKCSLPH
Trigger: GTGAGGAAGGCTGCACTTGTGAAATGAATGGGCTCACCCTCCCAGGTCCTGTGGGATTTGCTTCAACCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 72 bp TGTACCTCTTCTAAAAGCACATCTGCCATCGTACACTaGAGCAGGCGCGGGAGCTCCTCATTTCGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: CTSSKSTSAIVH*SRRGSSSFRSP
Trigger: TGGAGACCGAAATGAGGAGCTCCCGCGCCTGCTGCAGTGTACGATGGCAGATGTGCTTTTAGAAGAGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 72 bp CGTGCCAACATTGGCTACAGTCAAGCTAAAGCTACTTaGTGGATCGGCAGTGTCAGGGCGGATGTAGCACAG +
Preference number: 6 (lower is better)
Translates to: RANIGYSQAKAT*WIGSVRADVAQ
Trigger: CTGTGCTACATCCGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp GCCAACATTGGCTACAGTCAAGCTAAAGCTACTTGCTaGATCGGCAGTGTCAGGGCGGATGTAGCACAGGAG +
Preference number: 6 (lower is better)
Translates to: ANIGYSQAKATC*IGSVRADVAQE
Trigger: CTCCTGTGCTACATCCGCCCTGACACTGCCGATCCAGCAAGTAGCTTTAGCTTGACTGTAGCCAATGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp CTTGAATGGTCAGCGGAGTGGAAGATATGTGGGGCTTaGGGAGGATCCAAGGGTAGAGGTATGTACAGCCCA +
Preference number: 6 (lower is better)
Translates to: LEWSAEWKICGA*GGSKGRGMYSP
Trigger: TGGGCTGTACATACCTCTACCCTTGGATCCTCCCCAAGCCCCACATATCTTCCACTCCGCTGACCATTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 72 bp CCCTCAACGGGCTGGTCATCATCACTGTCCAGGCCGTaGTCAGACTGGTTACTGGAGAAGGTAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: PSTGWSSSLSRP*SDWLLEKVAEE
Trigger: TTCTTCTGCTACCTTCTCCAGTAACCAGTCTGACAACGGCCTGGACAGTGATGATGACCAGCCCGTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 72 bp CACACTCTAGCAGGTTTCGGGAGAGATCCAAGAAAGTaGGCAGGCTGGGTACTGGATAGACGTTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: HTLAGFGRDPRK*AGWVLDRRSLL
Trigger: CAGCAGTGAACGTCTATCCAGTACCCAGCCTGCTCACTTTCTTGGATCTCTCCCGAAACCTGCTAGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp ATCAGAAGCAGTGGACCCCACTTCACTGCTCACCTCTaGGGTGGACATCTCACTGCTGAACTCAGAGGCAAT +
Preference number: 6 (lower is better)
Translates to: IRSSGPHFTAHL*GGHLTAELRGN
Trigger: ATTGCCTCTGAGTTCAGCAGTGAGATGTCCACCTCAGAGGTGAGCAGTGAAGTGGGGTCCACTGCTTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CCA 72 bp TCGGGAGAGATCCAAGAAAGTGAGCAGGCTGGGTACTaGATAGACGTTCACTGCTGTCAGCCTGTTGGAACT +
Preference number: 6 (lower is better)
Translates to: SGEIQESEQAGY*IDVHCCQPVGT
Trigger: AGTTCCAACAGGCTGACAGCAGTGAACGTCTATCCAGTACCCAGCCTGCTCACTTTCTTGGATCTCTCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp AGCCATTGGAGAGTTTCTTCCCATAGAGGCAGGAGGTaGAGGGAGACTTCTGTAACTCCATCCTGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SHWRVSSHRGRR*RETSVTPSCPC
Trigger: GCAAGGACAGGATGGAGTTACAGAAGTCTCCCTCCACCTCCTGCCTCTATGGGAAGAAACTCTCCAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 72 bp GAGGTGGAGGGAGACTTCTGTAACTCCATCCTGTCCTaGCTCATTGGCAGGAGCATGCCACTATTCACACTG +
Preference number: 6 (lower is better)
Translates to: EVEGDFCNSILS*LIGRSMPLFTL
Trigger: CAGTGTGAATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTTACAGAAGTCTCCCTCCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 90 bp AGGAGGTGGAGGGAGACTTCTGTAACTCCATCCTGTCCTTGCTCATaGGCAGGAGCATGCCACTATTCACACTGTTCTGTCTTCGGATCC +
Preference number: 6 (lower is better)
Translates to: RRWRETSVTPSCPCS*AGACHYSHCSVFGS
Trigger: GGATCCGAAGACAGAACAGTGTGAATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTTACAGAAGTCTCCCTCCACCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 90 bp TTCATGGGGCTCAGGCTCGAGCCGGCTGTCCTGGTGCTGTTTCATTaGTTCCTTCACTTCTTCTTCCAGGTCATGAGGCACAACAAACTG +
Preference number: 6 (lower is better)
Translates to: FMGLRLEPAVLVLFH*FLHFFFQVMRHNKL
Trigger: CAGTTTGTTGTGCCTCATGACCTGGAAGAAGAAGTGAAGGAACAAATGAAACAGCACCAGGACAGCCGGCTCGAGCCTGAGCCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 90 bp ATCTTCCGGAACCTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: IFRNLCDDGFLVLHP*SLLWVLLQAEDFRE
Trigger: CTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGGTTCCGGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS CAA 90 bp CACTTTGTTGTCCTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: HFVVLCDDGFLVLHP*SLLWVLLQAEDFRE
Trigger: CTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGGACAACAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS TCA 72 bp CCCTGCCATCTCAGCCAGTCCATGGCTCCAGAAGGTTaGCGTAACTGTAGAATCTGTGGTTGGCAAAGGTTT +
Preference number: 6 (lower is better)
Translates to: PCHLSQSMAPEG*RNCRICGWQRF
Trigger: AAACCTTTGCCAACCACAGATTCTACAGTTACGTCAACCTTCTGGAGCCATGGACTGGCTGAGATGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 72 bp AGGTGGAGGGAGACTTCTGTAACTCCATCCTGTCCTTaGTCATTGGCAGGAGCATGCCACTATTCACACTGT +
Preference number: 6 (lower is better)
Translates to: RWRETSVTPSCP*SLAGACHYSHC
Trigger: ACAGTGTGAATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTTACAGAAGTCTCCCTCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 72 bp AGATTCGCAGGTGCAGGTGCCCTACCAGGACAGGTATaGACTGATCCGTCAGGAGATTGTTGGTCAGATAAA +
Preference number: 6 (lower is better)
Translates to: RFAGAGALPGQV*TDPSGDCWSDK
Trigger: TTTATCTGACCAACAATCTCCTGACGGATCAGTGCATACCTGTCCTGGTAGGGCACCTGCACCTGCGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp TTTGAGATCTTCCGGAACCTCTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGCCTCCTCTGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: FEIFRNLCDDGF*VLHPLSLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGGTTCCGGAAGATCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568004.5
CDS CAA 90 bp TGTTCCAAGCTGCATAAGGAGCTAAGATCCAAGTCAGTCAGTCGGTaGTCCCGCAGATCCACGTGGGTGATGTGTTTATTTCCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: CSKLHKELRSKSVSR*SRRSTWVMCLFPSR
Trigger: TCTGGAGGGAAATAAACACATCACCCACGTGGATCTGCGGGACAACCGACTGACTGACTTGGATCTTAGCTCCTTATGCAGCTTGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 90 bp AAGAACCCAATTCTCTGTGATGATGGCTTTTTGGTCCTTCACCCTTaGAGCCTCCTCTGGGTCCTGCTCCAGGCTGAAGACTTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: KNPILCDDGFLVLHP*SLLWVLLQAEDFRE
Trigger: CTCTCTAAAGTCTTCAGCCTGGAGCAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGAATTGGGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS GCA 72 bp CTTGCCTCCTCCTGGAGCAAAATTATCAGAATTCGGTaGTCTGCTTCAAGCAGTAATATGGCCTGTGACCCG +
Preference number: 6 (lower is better)
Translates to: LASSWSKIIRIR*SASSSNMACDP
Trigger: CGGGTCACAGGCCATATTACTGCTTGAAGCAGAGCACCGAATTCTGATAATTTTGCTCCAGGAGGAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS GCA 72 bp AAAGCAGCTGCAGCATACTCAAACTCTCCTCTCCAGTaGAGGCGGATGGTAAAGACTCCAGACTATTTGCAG +
Preference number: 6 (lower is better)
Translates to: KAAAAYSNSPLQ*RRMVKTPDYLQ
Trigger: CTGCAAATAGTCTGGAGTCTTTACCATCCGCCTGCACTGGAGAGGAGAGTTTGAGTATGCTGCAGCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp GCAGTGATAGTAGTTTTGTTGCCAATGGGCCAAATTTaGAGTCAGCCAGCCTGTTTCCAGATCTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: AVIVVLLPMGQI*SQPACFQISPL
Trigger: CAGAGGGGAGATCTGGAAACAGGCTGGCTGACTCCAAATTTGGCCCATTGGCAACAAAACTACTATCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS CAA 72 bp AGGGAGACTTCTGTAACTCCATCCTGTCCTTGCTCATaGGCAGGAGCATGCCACTATTCACACTGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: RETSVTPSCPCS*AGACHYSHCSV
Trigger: GACAGAACAGTGTGAATAGTGGCATGCTCCTGCCAATGAGCAAGGACAGGATGGAGTTACAGAAGTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CAA 90 bp TTTCGTTCTCGCAGTGATAGTAGTTTTGTTGCCAATGGGCCAAATTaGGAGTCAGCCAGCCTGTTTCCAGATCTCCCCTCTGCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: FRSRSDSSFVANGPN*ESASLFPDLPSALL
Trigger: AAGAAGGGCAGAGGGGAGATCTGGAAACAGGCTGGCTGACTCCAAATTTGGCCCATTGGCAACAAAACTACTATCACTGCGAGAACGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS TCA 72 bp CAGCTGCTAATGGGTCTTGTACGTGACGTACAGCATTaGCAGCTTCTGTGTAGGACAAGTGTTCCCACAATG +
Preference number: 6 (lower is better)
Translates to: QLLMGLVRDVQH*QLLCRTSVPTM
Trigger: CATTGTGGGAACACTTGTCCTACACAGAAGCTGTCAATGCTGTACGTCACGTACAAGACCCATTAGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 72 bp CTCCAGCACATATTTCTGATGCTGGTGTCTCTACAGTaGAAAGGACGAGATGTAAGTCAGAGGAAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LQHIFLMLVSLQ*KGRDVSQRKRR
Trigger: CCTCCTCTTCCTCTGACTTACATCTCGTCCTTTGCACTGTAGAGACACCAGCATCAGAAATATGTGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000538126.5
ENST00000567016.1
ENST00000568954.5
CDS CCA 72 bp ATGCTTTGTTTCCCAGAATCAGCAACTCATCTTGAATaGTCAGCGGAGTGGAAGATATGTGGGGCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: MLCFPESATHLE*SAEWKICGAWG
Trigger: TCCCCAAGCCCCACATATCTTCCACTCCGCTGACCATTCAAGATGAGTTGCTGATTCTGGGAAACAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS CCA 72 bp CCAGGACAGGTATGCACTGATCCGTCAGGAGATTGTTaGTCAGATAAAGCAGCTGCAGCATACTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: PGQVCTDPSGDC*SDKAAAAYSNS
Trigger: AGAGTTTGAGTATGCTGCAGCTGCTTTATCTGACCAACAATCTCCTGACGGATCAGTGCATACCTGTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp CTGCATAAGGAGCTAAGATCCAAGTCAGTCAGTCGGTaGTCCCGCAGATCCACGTGGGTGATGTGTTTATTT +
Preference number: 6 (lower is better)
Translates to: LHKELRSKSVSR*SRRSTWVMCLF
Trigger: AAATAAACACATCACCCACGTGGATCTGCGGGACAACCGACTGACTGACTTGGATCTTAGCTCCTTATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp TTGGTTAAGAACCCAATTCTCTGTGATGATGGCTTTTaGGTCCTTCACCCTTTGAGCCTCCTCTGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: LVKNPILCDDGF*VLHPLSLLWVL
Trigger: CAGGACCCAGAGGAGGCTCAAAGGGTGAAGGACCAAAAAGCCATCATCACAGAGAATTGGGTTCTTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS CAA 90 bp CCAATTTATTTAGTTTGCTTGCAGGAAAGGTCTGTAACTGATTGTTaGCAAGGTGCAAGATTCGCAGGTGCAGGTGCCCTACCAGGACAG +
Preference number: 6 (lower is better)
Translates to: PIYLVCLQERSVTDC*QGARFAGAGALPGQ
Trigger: CTGTCCTGGTAGGGCACCTGCACCTGCGAATCTTGCACCTTGCAAACAATCAGTTACAGACCTTTCCTGCAAGCAAACTAAATAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp CACAATGCTTTGTTTCCCAGAATCAGCAACTCATCTTaGATGGTCAGCGGAGTGGAAGATATGTGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: HNALFPRISNSS*MVSGVEDMWGL
Trigger: CAAGCCCCACATATCTTCCACTCCGCTGACCATTCAAGATGAGTTGCTGATTCTGGGAAACAAAGCATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568954.5
CDS GCA 72 bp GGAGTGTGCAACAAGGGTGTGCAGCCTTTTACAGTTTaGTATGGTTGTGGGAATGGTTTTAAGCTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: GVCNKGVQPFTV*YGCGNGFKLVA
Trigger: GGCAACAAGCTTAAAACCATTCCCACAACCATAGCAAACTGTAAAAGGCTGCACACCCTTGTTGCACACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp TCCAAGTCAGTCAGTCGGTTGTCCCGCAGATCCACGTaGGTGATGTGTTTATTTCCCTCCAGATTTTCAATA +
Preference number: 6 (lower is better)
Translates to: SKSVSRLSRRST*VMCLFPSRFSI
Trigger: TATTGAAAATCTGGAGGGAAATAAACACATCACCCACGTGGATCTGCGGGACAACCGACTGACTGACTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp ACCTCCCAGCCATGTTTTAATTCCCTTGCCTCCTCCTaGAGCAAAATTATCAGAATTCGGTGCTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: TSQPCFNSLASS*SKIIRIRCSAS
Trigger: TGAAGCAGAGCACCGAATTCTGATAATTTTGCTCCAGGAGGAGGCAAGGGAATTAAAACATGGCTGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS CAA 72 bp TTAGTTTGCTTGCAGGAAAGGTCTGTAACTGATTGTTaGCAAGGTGCAAGATTCGCAGGTGCAGGTGCCCTA +
Preference number: 6 (lower is better)
Translates to: LVCLQERSVTDC*QGARFAGAGAL
Trigger: TAGGGCACCTGCACCTGCGAATCTTGCACCTTGCAAACAATCAGTTACAGACCTTTCCTGCAAGCAAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp AAGGAACAGGAAGATGAACACAACCTTTTGAGTCAGTaGGTAGCAAAGCAGTCACAACAGTACCATGTCCAG +
Preference number: 6 (lower is better)
Translates to: KEQEDEHNLLSQ*VAKQSQQYHVQ
Trigger: CTGGACATGGTACTGTTGTGACTGCTTTGCTACTCACTGACTCAAAAGGTTGTGTTCATCTTCCTGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS CCA 72 bp TTATCAGAATTCGGTGCTCTGCTTCAAGCAGTAATATaGCCTGTGACCCGGTTTATGATTTATTTGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LSEFGALLQAVI*PVTRFMIYLQG
Trigger: GCCTTGCAAATAAATCATAAACCGGGTCACAGGCCATATTACTGCTTGAAGCAGAGCACCGAATTCTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568954.5
CDS CAA 72 bp ATATTCCCCAACATTCTGCTCAAGTATCCCCTCCTTTaGTGGAGCACTTCACATCTATCATGCTCATTCGTA +
Preference number: 6 (lower is better)
Translates to: IFPNILLKYPLL*WSTSHLSCSFV
Trigger: TACGAATGAGCATGATAGATGTGAAGTGCTCCACAAAAGGAGGGGATACTTGAGCAGAATGTTGGGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS CAA 72 bp TCACTTATCTTCCCCAGGAAAATCCTGCAGGTGCTTTaGGTTAAGAACCCAATTCTCTGTGATGATGGCTTT +
Preference number: 6 (lower is better)
Translates to: SLIFPRKILQVL*VKNPILCDDGF
Trigger: AAAGCCATCATCACAGAGAATTGGGTTCTTAACCAAAAGCACCTGCAGGATTTTCCTGGGGAAGATAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564884.5
CDS TCA 72 bp AATTTATTTAGTTTGCTTGCAGGAAAGGTCTGTAACTaGTTGTTTGCAAGGTGCAAGATTCGCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: NLFSLLAGKVCN*LFARCKIRRCR
Trigger: CCTGCACCTGCGAATCTTGCACCTTGCAAACAATCAGTTACAGACCTTTCCTGCAAGCAAACTAAATAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 72 bp AAGGTGTTAGCCATGAAAACTGTGTCATTAGTTGACTaGTGTACCTCTTCTAAAAGCACATCTGCCATCGTA +
Preference number: 6 (lower is better)
Translates to: KVLAMKTVSLVD*CTSSKSTSAIV
Trigger: TACGATGGCAGATGTGCTTTTAGAAGAGGTACAGCAGTCAACTAATGACACAGTTTTCATGGCTAACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 72 bp CTTTACTGCTGTCTGTGTTTCCATCCATCATCTTCGTaGACCTCTCTTTTCCTTGTGTTTTCAGAAACGTGT +
Preference number: 6 (lower is better)
Translates to: LYCCLCFHPSSS*TSLFLVFSETC
Trigger: ACACGTTTCTGAAAACACAAGGAAAAGAGAGGTCAACGAAGATGATGGATGGAAACACAGACAGCAGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS CAA 90 bp CTCTACTTTATATTCCCCAACATTCTGCTCAAGTATCCCCTCCTTTaGTGGAGCACTTCACATCTATCATGCTCATTCGTAATAACTCAG +
Preference number: 6 (lower is better)
Translates to: LYFIFPNILLKYPLL*WSTSHLSCSFVITQ
Trigger: CTGAGTTATTACGAATGAGCATGATAGATGTGAAGTGCTCCACAAAAGGAGGGGATACTTGAGCAGAATGTTGGGGAATATAAAGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393524.6
CDS CAA 90 bp TGCAGCCTTTTACAGTTTGCTATGGTTGTGGGAATGGTTTTAAGCTaGTTGCCACTTAGGTTCAGTTCCTCCAATTGCTCCAATTTATTT +
Preference number: 6 (lower is better)
Translates to: CSLLQFAMVVGMVLS*LPLRFSSSNCSNLF
Trigger: AAATAAATTGGAGCAATTGGAGGAACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCCCACAACCATAGCAAACTGTAAAAGGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS GCA 72 bp TTAAGCTTGTTGCCACTTAGGTTCAGTTCCTCCAATTaGTCCAATTTATTTAGTTTGCTTGCAGGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: LSLLPLRFSSSN*SNLFSLLAGKV
Trigger: GACCTTTCCTGCAAGCAAACTAAATAAATTGGAGCAATTGGAGGAACTGAACCTAAGTGGCAACAAGCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CCA 72 bp TTCAAATGGTTCATCCTTAAATCCACATGCTTGATATaGTTCATCCTATTCAGCACCCCTAAGTTCAGGACT +
Preference number: 6 (lower is better)
Translates to: FKWFILKSTCLI*FILFSTPKFRT
Trigger: AGTCCTGAACTTAGGGGTGCTGAATAGGATGAACCATATCAAGCATGTGGATTTAAGGATGAACCATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393524.6
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS CAA 90 bp AGCCTTTTACAGTTTGCTATGGTTGTGGGAATGGTTTTAAGCTTGTaGCCACTTAGGTTCAGTTCCTCCAATTGCTCCAATTTATTTAGT +
Preference number: 6 (lower is better)
Translates to: SLLQFAMVVGMVLSL*PLRFSSSNCSNLFS
Trigger: ACTAAATAAATTGGAGCAATTGGAGGAACTGAACCTAAGTGGCAACAAGCTTAAAACCATTCCCACAACCATAGCAAACTGTAAAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp GACGTAACTGTAGAATCTGTGGTTGGCAAAGGTTTCTaGTCAATTTTCAGGGTTGTGATATGGCTAAATATG +
Preference number: 6 (lower is better)
Translates to: DVTVESVVGKGF*SIFRVVIWLNM
Trigger: CATATTTAGCCATATCACAACCCTGAAAATTGATCAGAAACCTTTGCCAACCACAGATTCTACAGTTACGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393524.6
ENST00000564884.5
ENST00000567016.1
ENST00000568004.5
ENST00000568954.5
CDS TCA 72 bp GTGGTAAAGAATAACCTTACCTTAAATCCACATGCTTaGTATGGTTCATCCTATTCAGCACCCCTAAGTTCA +
Preference number: 6 (lower is better)
Translates to: VVKNNLTLNPHA*YGSSYSAPLSS
Trigger: TGAACTTAGGGGTGCTGAATAGGATGAACCATATCAAGCATGTGGATTTAAGGTAAGGTTATTCTTTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS CCA 72 bp ATCTTTGTCAAAGGCAATTTGATAGTCTCTATCACATaGTACAACTACCTGATCCTTAATCTCTCTGCTACT +
Preference number: 6 (lower is better)
Translates to: IFVKGNLIVSIT*YNYLILNLSAT
Trigger: AGTAGCAGAGAGATTAAGGATCAGGTAGTTGTACCATGTGATAGAGACTATCAAATTGCCTTTGACAAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538126.5
CDS CCA 72 bp TTAAACACTTATATCCAAATACCTAATAATGTCAGGTaGGCACTAAGTAGGACAAAGGAACAGGAAGATGAA +
Preference number: 6 (lower is better)
Translates to: LNTYIQIPNNVR*ALSRTKEQEDE
Trigger: TTCATCTTCCTGTTCCTTTGTCCTACTTAGTGCCCACCTGACATTATTAGGTATTTGGATATAAGTGTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538126.5