RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHIP (Homo sapiens)

Ensembl gene IDs: ENSG00000146247

Ensembl transcript IDs: ENST00000275034.5, ENST00000479165.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCACTGGAAACTCTAATGAACCAGCATTTACATAATGGTATCTaGCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACT +
Preference number: 1 (lower is better)
Translates to: RALETLMNQHLHNGI*HMTTLVSSLLRLCT
Trigger: AGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAGAGTTTCCAGTGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR TCA 90 bp ACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCTTCTaGCTCAATTTGACCTTTTCTTGGGTACTATACATAGTTCGTAAT +
Preference number: 1 (lower is better)
Translates to: TRFISGAPKVVLTVF*LNLTFSWVLYIVRN
Trigger: ATTACGAACTATGTATAGTACCCAAGAAAAGGTCAAATTGAGTCAGAAGACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR TCA 90 bp TTTAGAATATATAGCCTTTCCAATATTGAAAAGTGTATGCTGTCCTaGCGTCAAAAACAGGCTTTCCACTGCACTGATTCTCAGTCTTTG +
Preference number: 1 (lower is better)
Translates to: FRIYSLSNIEKCMLS*RQKQAFHCTDSQSL
Trigger: CAAAGACTGAGAATCAGTGCAGTGGAAAGCCTGTTTTTGACGTCAGGACAGCATACACTTTTCAATATTGGAAAGGCTATATATTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CCA 90 bp AGATGTTTTTATTGCTTACCTAAGACAACTGCCAATATTTCTTTCTaGCCTATTAACAGTACATACATAGTGTTACTGCCTCAAAGAGGA +
Preference number: 1 (lower is better)
Translates to: RCFYCLPKTTANISF*PINSTYIVLLPQRG
Trigger: TCCTCTTTGAGGCAGTAACACTATGTATGTACTGTTAATAGGCCAGAAAGAAATATTGGCAGTTGTCTTAGGTAAGCAATAAAAACATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTGGCTTTCCACTGCACTaGTTCTCAGTCTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSGFPLH*FSVFGT
Trigger: TGTGCCAAAGACTGAGAATCAGTGCAGTGGAAAGCC...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTACATCAGGGTCATGCTaGTACATATTTTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSTSGSC*YIFSPS
Trigger: GGATGGGGAAAATATGTATCAGCATGACCCTGATGT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CAA 90 bp AACCTCACACTTAACAACAATCAGGTCATGGCCGCAAGACACAGCTaGTCTGGAAGCTACACATTAAATGATGTATTCTATTTAGGGACT +
Preference number: 2 (lower is better)
Translates to: NLTLNNNQVMAARHS*SGSYTLNDVFYLGT
Trigger: AGTCCCTAAATAGAATACATCATTTAATGTGTAGCTTCCAGACAAGCTGTGTCTTGCGGCCATGACCTGATTGTTGTTAAGTGTGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAAGTGTATGCTGTCCTaGCGTCAAAAACAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNKCMLS*RQKQAF
Trigger: GAAAGCCTGTTTTTGACGTCAGGACAGCATACACTT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCTTCTAGCTGACATTTaGGAGAGATATACAGTAGGT +
Preference number: 2 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLLADI*ERYTVG
Trigger: ACCTACTGTATATCTCTCTCAAATGTCAGCTAGAAG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTATATTGAAAAGTGTATaGTGTCCTGACGTCAAAAAC +
Preference number: 2 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSILKSV*CPDVKN
Trigger: GTTTTTGACGTCAGGACAGCATACACTTTTCAATAT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CAA 90 bp TACAAACACGAAGTACTATATTGCAAGGAACAGAGGTTTTGTGCTTaGGTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGT +
Preference number: 2 (lower is better)
Translates to: YKHEVLYCKEQRFCA*VFNLTSVKYWGILG
Trigger: ACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGACCAAAGCACAAAACCTCTGTTCCTTGCAATATAGTACTTCGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCTGCTGTTTATAATATaGTACTCCAGGTTCGGAAGG +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGLLFII*YSRFGR
Trigger: CCTTCCGAACCTGGAGTATCATATTATAAACAGCAG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTAGTAACCAGCATGTGTaGATCTGCCTTATATGCATG +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGSNQHV*ICLICM
Trigger: CATGCATATAAGGCAGATGCACACATGCTGGTTACT...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCTTGTTTGGCAGAAATaGAATAAAGCAAAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSLVWQK*NKAKAS
Trigger: GGAGGCTTTTGCTTTATTCCATTTCTGCCAAACAAG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCGGTTACAAAGAATCTaGTCCAAGTTACTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNRLQRI*SKLLCF
Trigger: AAAGCACAGTAACTTGGATCAGATTCTTTGTAACCG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAAACTAATGCTCCACTaGAACTTTTCATCTGGGACT +
Preference number: 2 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNKLMLH*NFSSGT
Trigger: AGTCCCAGATGAAAAGTTTCAGTGGAGCATTAGTTT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCAAAGTTGCTTCTAGCTaGCATTTGAGAGAGATATAC +
Preference number: 2 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSKVASS*HLREIY
Trigger: GTATATCTCTCTCAAATGTCAGCTAGAAGCAACTTT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGTACTTACAGTCTTCTaGCTCAATTTGACCTTTTCT +
Preference number: 2 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSVLTVF*LNLTFS
Trigger: AGAAAAGGTCAAATTGAGTCAGAAGACTGTAAGTAC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGTAAAGAGTGGTTGCTaGAAGGTAATTTTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGVKSGC*KVIFLG
Trigger: GCCAAGAAAAATTACCTTTCAGCAACCACTCTTTAC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCAGAAAATAGTCCAATaGCACTATAGCAGGTCACAA +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGQKIVQ*HYSRSQ
Trigger: TTGTGACCTGCTATAGTGGCATTGGACTATTTTCTG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTAGACCCCTGTCTTCTTaGAGTTTTAATATGGTCCAA +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGRPLSS*SFNMVQ
Trigger: TTGGACCATATTAAAACTGCAAGAAGACAGGGGTCT...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGCAAAATCTCAGCAATaGAGTCAAGATCTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGAKSQQ*SQDLEN
Trigger: ATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTACTCACTGTTCTACTaGAGTGTGTACAAGGTTTAT +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGYSLFY*SVYKVY
Trigger: ATAAACCTTGTACACACTGCAGTAGAACAGTGAGTA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTTAGTTCAGATCACTTaGAAATTAGGGGAACTAAGG +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGLVQIT*KLGELR
Trigger: CCTTAGTTCCCCTAATTTCCAAGTGATCTGAACTAA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTTACATAATGGTATCTaGCATATGACCACTTTGGTA +
Preference number: 2 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGLHNGI*HMTTLV
Trigger: TACCAAAGTGGTCATATGGCAGATACCATTATGTAA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCTGATTCTCAGTCTTTaGCACAATAAACAGAGATTG +
Preference number: 2 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLILSL*HNKQRL
Trigger: CAATCTCTGTTTATTGTGCCAAAGACTGAGAATCAG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGGCACAATCATTAAATaGAGTTTTTCTTTAGGGTGT +
Preference number: 2 (lower is better)
Translates to: STAKSQQCSQDLENGLLNGTIIK*SFSLGC
Trigger: ACACCCTAAAGAAAAACTCCATTTAATGATTGTGCC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR TCA 72 bp CGACTTTGCTGGGGTTCCTCTACTTCCTGTCAGGAATaGAGGTCAAATTCCCATTTCCCAACTCCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: RLCWGSSTSCQE*RSNSHFPTPGQ
Trigger: CTGGCCTGGAGTTGGGAAATGGGAATTTGACCTTCATTCCTGACAGGAAGTAGAGGAACCCCAGCAAAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CCA 72 bp GTTCAGAAAACCTCACACTTAACAACAATCAGGTCATaGCCGCAAGACACAGCTTGTCTGGAAGCTACACAT +
Preference number: 3 (lower is better)
Translates to: VQKTSHLTTIRS*PQDTACLEATH
Trigger: ATGTGTAGCTTCCAGACAAGCTGTGTCTTGCGGCCATGACCTGATTGTTGTTAAGTGTGAGGTTTTCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCAAAGCTATGTATCTATaGCCCAGGGCTGTGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSKAMYL*PRAVSL
Trigger: GAGACTCACAGCCCTGGGCAATAGATACATAGCTTT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCTTTTCATCTGGGACTaGAGAATGTTGGAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNLFIWD*RMLELR
Trigger: CCTCAACTCCAACATTCTCAAGTCCCAGATGAAAAG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR TCA 72 bp TATAGCCTTTCCAATATTGAAAAGTGTATGCTGTCCTaGCGTCAAAAACAGGCTTTCCACTGCACTGATTCT +
Preference number: 3 (lower is better)
Translates to: YSLSNIEKCMLS*RQKQAFHCTDS
Trigger: AGAATCAGTGCAGTGGAAAGCCTGTTTTTGACGTCAGGACAGCATACACTTTTCAATATTGGAAAGGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR TCA 72 bp ATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCTTCTaGCTCAATTTGACCTTTTCTTGGGTACTATACATA +
Preference number: 3 (lower is better)
Translates to: ISGAPKVVLTVF*LNLTFSWVLYI
Trigger: TATGTATAGTACCCAAGAAAAGGTCAAATTGAGTCAGAAGACTGTAAGTACCACTTTTGGCGCTCCAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR GCA 72 bp GAAACTCTAATGAACCAGCATTTACATAATGGTATCTaGCATATGACCACTTTGGTAAGCAGCTTGTTGAGA +
Preference number: 3 (lower is better)
Translates to: ETLMNQHLHNGI*HMTTLVSSLLR
Trigger: TCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAGAGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCATAGCCTTTCCAATATaGAAAAGTGTATGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSIAFPI*KSVCCP
Trigger: AGGACAGCATACACTTTTCAATATTGGAAAGGCTAT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGTAATGACTTTTCATTaGGAGCAAACTTTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSVMTFH*EQTLLS
Trigger: ACTGAGCAAAGTTTGCTCCAAATGAAAAGTCATTAC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCAATTTGACCTTTTCTaGGGTACTATACATAGTTCG +
Preference number: 3 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSQFDLF*GTIHSS
Trigger: CGAACTATGTATAGTACCCAAGAAAAGGTCAAATTG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGTACTATATTCCATCTaGAACCTATTTTCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGVLYSI*NLFSWL
Trigger: GAGCCAAGAAAATAGGTTCAAGATGGAATATAGTAC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTTTGTAGTTACTACATaGCAGGGACAGGTATTCTTA +
Preference number: 3 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGFVVTT*QGQVFL
Trigger: TAAGAATACCTGTCCCTGCAATGTAGTAACTACAAA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR GCA 72 bp TTACCACACATTGATTACAAACACGAAGTACTATATTaGAAGGAACAGAGGTTTTGTGCTTTGGTCTTTAAT +
Preference number: 3 (lower is better)
Translates to: LPHIDYKHEVLY*KEQRFCALVFN
Trigger: ATTAAAGACCAAAGCACAAAACCTCTGTTCCTTGCAATATAGTACTTCGTGTTTGTAATCAATGTGTGGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CCA 72 bp TGTGCTTTGGTCTTTAATCTTACTTCCGTTAAATACTaGGGAATCCTGGGTCATAAAATTGGTATTATTACA +
Preference number: 3 (lower is better)
Translates to: CALVFNLTSVKY*GILGHKIGIIT
Trigger: TGTAATAATACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGACCAAAGCACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTTCCCGGTCCAGTCGGTaGGCCGGGGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSSRSSR*AGAAAP
Trigger: AGGAGCTGCTGCCCCGGCGCACCGACTGGACCGGGA...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGGGAAGCGGGGACGGTaGCGCCGCCTGCCCTATAGC +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSGKRGR*RRLPYS
Trigger: GCTATAGGGCAGGCGGCGGCACCGTCCCCGCTTCCC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGATTCTGGTAGGTCCTaGGATGCTCCTTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPADSGRS*DAPSRS
Trigger: GGACCGGGAAGGAGCATCCCAGGACCTACCAGAATC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGACGGTGCCGCCGCCTaGCCTATAGCTGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNDGAAA*PIAVSV
Trigger: CACACTGACAGCTATAGGGCAGGCGGCGGCACCGTC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGTGCATGCAAAATGCTaGCCATCAGGAGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAVHAKC*PSGEHL
Trigger: CAAATGCTCTCCTGATGGTCAGCATTTTGCATGCAC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTGCTGTCCAGTGGGCTaGTCTCCTGGTTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSCCPVG*SPGLLA
Trigger: AGCAAGCAAACCAGGAGATCAGCCCACTGGACAGCA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGAGGAGATCTACCGGCTaGCGGAAAGGCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKRRSTG*RKGSES
Trigger: AGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCATGTGCTGATACACTaGAGTTGGAACAAGTCGCTC +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAHVLIH*SWNKSL
Trigger: GAGCGACTTGTTCCAACTGCAGTGTATCAGCACATG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGTTCTCCATTCTTCTTaGCTACTGGCTACACCAGCT +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAVLHSS*LLATPA
Trigger: AGCTGGTGTAGCCAGTAGGCAAGAAGAATGGAGAAC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGAACTGCCATCACTGTaGCATGCTCTCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAELPSL*HALSSS
Trigger: AGAAGAAGAGAGAGCATGGCACAGTGATGGCAGTTC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCACAAGACATGTTTATaGGTCACTTCAGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKHKTCL*VTSGPP
Trigger: CGGCGGCCCTGAAGTGACCCATAAACATGTCTTGTG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTAAGGTTTTGGCCTGCTaGACGAGTAGCCATATCCAA +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSKVLAC*TSSHIQ
Trigger: TTGGATATGGCTACTCGTCCAGCAGGCCAAAACCTT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCTGGAGCGCCAAAAGTaGTACTTACAGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSLERQK*YLQSSD
Trigger: GTCAGAAGACTGTAAGTACCACTTTTGGCGCTCCAG...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTACAACAATCAGGTCATaGCCGCAAGACACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSTTIRS*PQDTAC
Trigger: ACAAGCTGTGTCTTGCGGCCATGACCTGATTGTTGT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CAA 72 bp GCTCCACTGAAACTTTTCATCTGGGACTTGAGAATGTaGGAGTTGAGGGAGAGAATACTAGGGTTGGGTACT +
Preference number: 4 (lower is better)
Translates to: APLKLFIWDLRM*ELRERILGLGT
Trigger: AGTACCCAACCCTAGTATTCTCTCCCTCAACTCCAACATTCTCAAGTCCCAGATGAAAAGTTTCAGTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCGGATGTTCCACCACTaGCAGCAACTACTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSRMFHH*QQLLRL
Trigger: AAGGCGAAGTAGTTGCTGTCAGTGGTGGAACATCCG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTCAGGGTACTCAAGTTaGAGAGGTTCCTGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKSGYSS*RGSWLS
Trigger: CGAAAGCCAGGAACCTCTTCAACTTGAGTACCCTGA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCCATTGGAGTGTCAATaGTGTCTCTGTAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAPLECQ*CLCSLD
Trigger: ATCCAGACTACAGAGACATCATTGACACTCCAATGG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGTTTTACCGTTTATCTaGGCAGCATTGTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAVLPFI*AALCLG
Trigger: GCCAAGACACAATGCTGCTCAGATAAACGGTAAAAC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGGGGTTCAGAGCCTTTaGGTTCTTCAAACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAGVQSL*VLQTLL
Trigger: AAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGGTGGTCTTCCACAGTaGAACGCAGCCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGGGLPQ*NAARAD
Trigger: ATCTGCTCTGGCTGCGTTGCACTGTGGAAGACCACC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGCGTTGCTGTGCATTTaGCGTACACCTTCAATTTGT +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAALLCI*RTPSIC
Trigger: ACAAATTGAAGGTGTACGGCAAATGCACAGCAACGC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTAGGATCGAACGGGTGTaGTTCAAGAACAAATACCTC +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPARIERV*FKNKYL
Trigger: GAGGTATTTGTTCTTGAACCACACCCGTTCGATCCT...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTGGCCATTTACTTGAATaGTTCCTGGTACAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSGHLLE*FLVQER
Trigger: ACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCC...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGAAGAACAGATCATTTaGACTCCAGGCCGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNEEQII*TPGRGR
Trigger: GCGCCCTCGGCCTGGAGTTCAAATGATCTGTTCTTC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCTCCCATCTGAGGGATaGGTTGCTCCTCCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLPSEG*VAPPCN
Trigger: ATTGCAGGGAGGAGCAACTCATCCCTCAGATGGGAG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATGAAGTTACTCCCATCTaGGGGATGAGTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNEVTPI*GMSCSS
Trigger: GGAGGAGCAACTCATCCCTCAGATGGGAGTAACTTC...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTATTTTCTATCTCTTCTaGGGGTCTAGGAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSIFYLF*GSRSLF
Trigger: GAAGAGACTCCTAGACCCTCAGAAGAGATAGAAAAT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGGCTGTCCTTCGACCTTaGTTTCTAGTTCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKAVLRP*FLVLMW
Trigger: CCACATGAGAACTAGAAATCAAGGTCGAAGGACAGC...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCTGCTGTTTATAATATaGTACTCCAGGTTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPALLFII*YSRFGR
Trigger: CCTTCCGAACCTGGAGTATCATATTATAAACAGCAG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTATCTCTTTGAGCCACTaGACAATGGTGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSISLSH*TMVRTV
Trigger: TACAGTTCTCACCATTGTGCAGTGGCTCAAAGAGAT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCACTTCTTGGTGCGTTaGTGTGCATTTGCCGTACAC +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSHFLVR*CAFAVH
Trigger: GTGTACGGCAAATGCACAGCAACGCACCAAGAAGTG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCTTCATCCCTGGGATTaGTACCCCATTCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLHPWD*YPILHQ
Trigger: TTGATGGAGAATGGGGTACCAATCCCAGGGATGAAG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGATGCACTATGGCCCTaGAGAACAGCCAAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNDALWP*RTAKGA
Trigger: TGCACCTTTGGCTGTTCTTCAGGGCCATAGTGCATC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTCCTGTTGTAGTCTTTaGATCATGCTGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSSCCSL*IMLSSG
Trigger: CCCACTGGACAGCATGATTCAAAGACTACAACAGGA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCTTGGTGCGTTGCTGTaGATTTGCCGTACACCTTCA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNLGALL*ICRTPS
Trigger: TGAAGGTGTACGGCAAATGCACAGCAACGCACCAAG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATGCCATCACTGTGCCATaGTCTCTCTTCTTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNAITVP*SLFFFG
Trigger: TCCGAAGAAGAAGAGAGAGCATGGCACAGTGATGGC...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTACTTTCTTTGGTGGCTaGAGATTAATTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPATFFGG*RLIPAS
Trigger: AGATGCAGGAATTAATCTGCAGCCACCAAAGAAAGT...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCTACAACCACTCGGTTaGTTCTGGTTCGAACCACAG +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNLQPLG*FWFEPQ
Trigger: CTGTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTTTCTTACAATCTCCTTaGTCAATGACAGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAFLQSP*SMTADD
Trigger: GTCATCAGCTGTCATTGAGCAAGGAGATTGTAAGAA...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATATCCGCAATGCTGGGTaGGCTACCATAGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNIRNAG*ATIVNW
Trigger: CCAGTTAACTATGGTAGCCCACCCAGCATTGCGGAT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAATCATGCTGTCCAGTaGGCTGATCTCCTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNNHAVQ*ADLLVC
Trigger: GCAAACCAGGAGATCAGCCCACTGGACAGCATGATT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCAGTTAAAGGAACACTaGTACCTAGTTCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSQLKEH*YLVLQE
Trigger: TTCCTGAAGAACTAGGTACCAGTGTTCCTTTAACTG...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTACTTCCGTTAAATACTaGGGAATCCTGGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPATSVKY*GILGHK
Trigger: TTTATGACCCAGGATTCCCCAGTATTTAACGGAAGT...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGTTTACAGCCATGTCTaGTATTTCAGCAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSVYSHV*YFSSMS
Trigger: GGACATGCTGCTGAAATATCAGACATGGCTGTAAAC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGAATAAGATCGTATTTTaGCTCCTCTTGCCAGATCCC +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKNKIVF*LLLPDP
Trigger: GGGATCTGGCAAGAGGAGTCAAAATACGATCTTATT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTAGGTATTTCATTGAATaGCTTCCACCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSRYFIE*LPPFFS
Trigger: GGAAAAGAATGGTGGAAGTCATTCAATGAAATACCT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGACTTCCTGTCAGGAATaGAGGTCAAATTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKTSCQE*RSNSHF
Trigger: GAAATGGGAATTTGACCTTCATTCCTGACAGGAAGT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAACAGAGTATCCGCAATaGTGGGTGGGCTACCATAGT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKTEYPQ*WVGYHS
Trigger: ACTATGGTAGCCCACCCAGCATTGCGGATACTCTGT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAAATTGCCAAATACGTaGTGTCCCATCACGACTGCC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNKLPNT*CPITTA
Trigger: GGCAGTCGTGATGGGACAGCACGTATTTGGCAATTT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCAACTGGTTTATTCCTaGCACAATTCTTTCACATTC +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSQLVYS*HNSFTF
Trigger: GAATGTGAAAGAATTGTGGCAGGAATAAACCAGTTG...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTACACTGTTTCTTCCATaGTTGAATATCGTAAGACTG +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSTLFLP*LNIVRL
Trigger: CAGTCTTACGATATTCAAGCATGGAAGAAACAGTGT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATTCTTCGAACAACAGCTaGCTTTGCTCCTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNSSNNS*LCSSSE
Trigger: CTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGA...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTCTGAGATACGACTTTaGTGGGGTTCCTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGSEIRL*WGSSTS
Trigger: GGAAGTAGAGGAACCCCAGCAAAGTCGTATCTCAGA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCTGATACACTGCAGTTaGAACAAGTCGCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSLIHCS*NKSLKS
Trigger: AGACTTGAGCGACTTGTTCCAACTGCAGTGTATCAG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGACTGCGCCATGTCCTTaGCCTTCAATCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKTAPCP*PSIILK
Trigger: TTTCAATATGATTGAAGGCCAAGGACATGGCGCAGT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCCAGATCCCGCTCTGTaGCTATTTCACTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNPDPAL*LFHFLV
Trigger: CACCAAGAAGTGAAATAGCCACAGAGCGGGATCTGG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCATTCTTCTTGCCTACTaGCTACACCAGCTGATAGCT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSILLAY*LHQLIA
Trigger: AGCTATCAGCTGGTGTAGCCAGTAGGCAAGAAGAAT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCATCTGTGGCACAAATaGACATCTTCGGGGAATGGT +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNHLWHK*TSSGNG
Trigger: ACCATTCCCCGAAGATGTCCATTTGTGCCACAGATG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTTGATGCAGCACTACTaGAAACAGAGCTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSLMQHY*KQSCFC
Trigger: ACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCATCAA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCTGATTCTCAGTCTTTaGCACAATAAACAGAGATTG +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPALILSL*HNKQRL
Trigger: CAATCTCTGTTTATTGTGCCAAAGACTGAGAATCAG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCATATTTGCAGCAAGTaGTCAGGTGCTAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNHICSK*SGAKCL
Trigger: CAGACACTTAGCACCTGATCACTTGCTGCAAATATG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTGCATTTTCATGTGCTaGTACACTGCAGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSCIFMC*YTAVGT
Trigger: TGTTCCAACTGCAGTGTATCAGCACATGAAAATGCA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTACTTCGCCTTCATCTaGAGAACTACTGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSYFAFI*RTTAIF
Trigger: GAAAATGGCAGTAGTTCTTCAGATGAAGGCGAAGTA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGTGTCTTGGCGGTATTaGTCGTGTAGGTGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNVSWRY*SCRCRE
Trigger: TTCTCTACACCTACACGATCAATACCGCCAAGACAC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGAATCTCCTTGCTCAATaGCAGCTGATGACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKNLLAQ*QLMTLK
Trigger: TTTCAAAGTCATCAGCTGTCATTGAGCAAGGAGATT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCCATGGCCATTTACTTaGATGGTTCCTGGTACAAGA +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGPWPFT*MVPGTR
Trigger: TCTTGTACCAGGAACCATTCAAGTAAATGGCCATGG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATTTCTCCTTAACACTTTaGCACTTGCAGGGACTAGGA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNFSLTL*HLQGLG
Trigger: TCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAA...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATACATCAGGGTCATGCTaGTACATATTTTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNTSGSC*YIFSPS
Trigger: GGATGGGGAAAATATGTATCAGCATGACCCTGATGT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCTACTGCACTGCAGATaGGGGACAGTTCTAGATGTT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLLHCR*GTVLDV
Trigger: AACATCTAGAACTGTCCCTCATCTGCAGTGCAGTAG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTCCACACAACATGCTTaGAGCTTTTATTTGTGCGTA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKSTQHA*SFYLCV
Trigger: TACGCACAAATAAAAGCTGCAAGCATGTTGTGTGGA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCCTTTCCACACAACATaGTTGCAGCTTTTATTTGTG +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKPFHTT*LQLLFV
Trigger: CACAAATAAAAGCTGCAAGCATGTTGTGTGGAAAGG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAAAGAACAGCCAAAGGTaGACAGGTTCGAAGACACCA +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKKNSQR*TGSKTP
Trigger: TGGTGTCTTCGAACCTGTGCACCTTTGGCTGTTCTT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCTGTCCCATCACGACTaGCACTTACAAACCTGTTAC +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLSHHD*HLQTCY
Trigger: GTAACAGGTTTGTAAGTGGCAGTCGTGATGGGACAG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTATTTTGACTCCTCTTaGCAGATCCCACACTATCAC +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSYFDSS*QIPHYH
Trigger: GTGATAGTGTGGGATCTGGCAAGAGGAGTCAAAATA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCATCAGGAGAGCATTTaGAGTCAAATACTGCGCCAT +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGHQESI*SQILRH
Trigger: ATGGCGCAGTATTTGACTGCAAATGCTCTCCTGATG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCTATCTTGTCATATTTaGTACTGGACCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLSCHI*YWTQSQ
Trigger: TTGGCTTTGGGTCCAGTAGCAAATATGACAAGATAG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTATTTCACTTCTTGGTaGGTTGCTGTGCATTTGCCG +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGYFTSW*VAVHLP
Trigger: CGGCAAATGCACAGCAACGCACCAAGAAGTGAAATA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCTGCAGATTAATTCCTaGATCTGCTGTCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNLQINS*ICCPVR
Trigger: TCTGACTGGACAGCAGATGCAGGAATTAATCTGCAG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTTATAGATTAGTGATCTaGACTCACCATCAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSYRLVI*THHQLK
Trigger: CTTTAACTGATGGTGAGTGCAGATCACTAATCTATA...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGATATGCCACTACTGTaGAATACATGGGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSDMPLL*NTWDRL
Trigger: AAGCCTATCCCATGTATTGCACAGTAGTGGCATATC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTAAATCCTTGATCTTTTaGTTGGTGTATATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAKSLIF*LVYMLW
Trigger: CCAAAGCATATACACCAAGCAAAAGATCAAGGATTT...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGAAAAAGAAAGGGCACTaGTATTCTGGTGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKKKKGH*YSGVKL
Trigger: CAGTTTCACACCAGAATAGCAGTGCCCTTTCTTTTT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACACATTCTTCATCCCTaGGATTGGTACCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKHILHP*DWYPIL
Trigger: GAGAATGGGGTACCAATCCCAGGGATGAAGAATGTG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATTCGAGTAGAAGTTCCTaGCACATCAGCATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNSSRSS*HISIFL
Trigger: GAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGA...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATTCTTCATCTTCCTTTTaGGCTTCCTACCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNSSSSF*ASYLHD
Trigger: ATCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGA...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCTTGTTTGGCAGAAATaGAATAAAGCAAAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLVWQK*NKAKAS
Trigger: GGAGGCTTTTGCTTTATTCCATTTCTGCCAAACAAG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTAATACTGGGGAATCCTaGGTCATAAAATTGGTATTA +
Preference number: 4 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSNTGES*VIKLVL
Trigger: TAATACCAATTTTATGACCCAGGATTCCCCAGTATT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CAA 72 bp CTTAACAACAATCAGGTCATGGCCGCAAGACACAGCTaGTCTGGAAGCTACACATTAAATGATGTATTCTAT +
Preference number: 4 (lower is better)
Translates to: LNNNQVMAARHS*SGSYTLNDVFY
Trigger: ATAGAATACATCATTTAATGTGTAGCTTCCAGACAAGCTGTGTCTTGCGGCCATGACCTGATTGTTGTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACCCATTCAGCTTCCTTaGAAACAGAGTATCCGCAAT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKPIQLP*KQSIRN
Trigger: ATTGCGGATACTCTGTTTTCAAGGAAGCTGAATGGG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTACACAGTACACAGATaGCAAGTGTCCAAGAATTCG +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGYTVHR*QVSKNS
Trigger: CGAATTCTTGGACACTTGTCATCTGTGTACTGTGTA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAACGTTTGGTGGTGAATaGACCTCTGAGGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKTFGGE*TSEVEL
Trigger: AAGTTCTACCTCAGAGGTTCATTCACCACCAAACGT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGTATTTCATGGTAAATaGTCCGCCAGTCAGTTTACC +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGVFHGK*SASQFT
Trigger: GGTAAACTGACTGGCGGATCATTTACCATGAAATAC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAATCTTCTTCTAGGCTaGTGGTCCTTCCTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNNLLLG*WSFLFR
Trigger: TCGAAAAAGGAAGGACCATCAGCCTAGAAGAAGATT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTAAAAGTCTTTGCAGCTaGAGAAGTAGATGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGKSLCS*RSRWLL
Trigger: GAGCAACCATCTACTTCTTCAGCTGCAAAGACTTTT...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATAAGTGTATGCTGTCCTaGCGTCAAAAACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNKCMLS*RQKQAF
Trigger: GAAAGCCTGTTTTTGACGTCAGGACAGCATACACTT...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCAAACTAATGCTCCACTaGAACTTTTCATCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSKLMLH*NFSSGT
Trigger: AGTCCCAGATGAAAAGTTTCAGTGGAGCATTAGTTT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGGTACTTACAGTCTTCTaGCTCAATTTGACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKVLTVF*LNLTFS
Trigger: AGAAAAGGTCAAATTGAGTCAGAAGACTGTAAGTAC...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTGCAAAGTGTTCCACTaGAATGTATCTCTTACGAAA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKCKVFH*NVSLTK
Trigger: TTTCGTAAGAGATACATTTCAGTGGAACACTTTGCA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTCACCACTGGCTATTTaGACAGAATTAGACCTCACA +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGSPLAI*TELDLT
Trigger: TGTGAGGTCTAATTCTGTTCAAATAGCCAGTGGTGA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGCCAAAGTTGAGCCATaGATACAGAGGACAGTATAC +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNAKVEP*IQRTVY
Trigger: GTATACTGTCCTCTGTATTCATGGCTCAACTTTGGC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTCTCTTCGTTTAAATTaGCAAATACGTGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSSLRLN*QIRAVP
Trigger: TGGGACAGCACGTATTTGGCAATTTAAACGAAGAGA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAATGAGAGTCTGTGCATaGAAAATGCTGACCATCAGG +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKMRVCA*KMLTIR
Trigger: CCTGATGGTCAGCATTTTGCATGCACAGACTCTCAT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCCATCGCCTGTATTTTaGATCATCAAATTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKPSPVF*IIKLLS
Trigger: AGACAACAATTTGATGATGCAAAATACAGGCGATGG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCAGACCCCTGTCTTCTTaGAGTTTTAATATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSRPLSS*SFNMVQ
Trigger: TTGGACCATATTAAAACTGCAAGAAGACAGGGGTCT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACTACTGTGCAATACATaGGATAGGCTTGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKLLCNT*DRLADP
Trigger: TGGATCTGCAAGCCTATCCCATGTATTGCACAGTAG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTTGCTCAGTGACAACTaGATCTACAACCACTCGGTT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLLSDN*IYNHSV
Trigger: AACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAATGACTTTGAAAGAGTaGACGCCTTTGGGAGTACAG +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKMTLKE*TPLGVQ
Trigger: CTGTACTCCCAAAGGCGTCCACTCTTTCAAAGTCAT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTACTTGAATGGTTCCTaGTACAAGAGCGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSYLNGS*YKSVVL
Trigger: AAGAACAACGCTCTTGTACCAGGAACCATTCAAGTA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATTACAAGGTTTATCTCTaGAGCGCCAAAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNYKVYL*SAKSGT
Trigger: AGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTA...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATATGAAACTCCAATTCTaGTATTTTCTCTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNMKLQF*YFLWLT
Trigger: GGTCAGCCAGAGAAAATATCAGAATTGGAGTTTCAT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTTATCTTCTATTCCTTaGAGGTTTTGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLSSIP*RFWPAG
Trigger: TCCAGCAGGCCAAAACCTTCAAGGAATAGAAGATAA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTATTTTCTTGGCTCCTTaGATTGTAGAAACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGIFLAP*IVETQP
Trigger: TGGCTGAGTTTCTACAATTCAAGGAGCCAAGAAAAT...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAGGACAGTATACAAATaGGATTATCACCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNRTVYK*DYHHWL
Trigger: TAGCCAGTGGTGATAATCTCATTTGTATACTGTCCT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCCATATCCAACAAAATaGTCTTCCACTCTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGPYPTK*SSTLFV
Trigger: AACGAAGAGAGTGGAAGAGCATTTTGTTGGATATGG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCATCTGAAGAACTACTaGCATTTTCTATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSHLKNY*HFLSLL
Trigger: CAGAAGAGATAGAAAATGGCAGTAGTTCTTCAGATG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATACAGGCGCAAACTCATaGTGTAAATCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNTGANS*CKSLIF
Trigger: AAAGATCAAGGATTTACAGCATGAGTTTGCGCCTGT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGAAGAAGTAGATGGTTaGTCAGTGACAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNEEVDG*SVTTGS
Trigger: AGATCCAGTTGTCACTGAGCAACCATCTACTTCTTC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCCCTGGTATTGCAGATaGATTAGCTTTTGTAATAAA +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKPWYCR*ISFCNK
Trigger: TTTATTACAAAAGCTAATGCATCTGCAATACCAGGG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGCAAAATCTCAGCAATaGAGTCAAGATCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSAKSQQ*SQDLEN
Trigger: ATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCAGAAAATAGTCCAATaGCACTATAGCAGGTCACAA +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNQKIVQ*HYSRSQ
Trigger: TTGTGACCTGCTATAGTGGCATTGGACTATTTTCTG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGACGTCAGGCATATCATaGTATTTCATGGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKTSGIS*YFMVND
Trigger: ATCATTTACCATGAAATACCATGATATGCCTGACGT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGATGTCTCTGTAGTCTaGATATTCAAGGAGATCTAC +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGDVSVV*IFKEIY
Trigger: GTAGATCTCCTTGAATATCCAGACTACAGAGACATC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGGTAGCAAAATCCATTaGAGTGTCAATGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGGSKIH*SVNDVS
Trigger: AGAGACATCATTGACACTCCAATGGATTTTGCTACC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCTGAAACTTTTCATCTaGGACTTGAGAATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNLKLFI*DLRMLE
Trigger: CTCCAACATTCTCAAGTCCCAGATGAAAAGTTTCAG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAAGGGCACTGCTATTCTaGTGTGAAACTGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKRALLF*CETAVY
Trigger: ATAAACAGCAGTTTCACACCAGAATAGCAGTGCCCT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CAA 72 bp GAAGTACTATATTGCAAGGAACAGAGGTTTTGTGCTTaGGTCTTTAATCTTACTTCCGTTAAATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVLYCKEQRFCA*VFNLTSVKYWG
Trigger: TCCCCAGTATTTAACGGAAGTAAGATTAAAGACCAAAGCACAAAACCTCTGTTCCTTGCAATATAGTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCTGACGGAAAGGCTCTaGATCTTCACATTGAAATAT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLTERL*IFTLKY
Trigger: ATATTTCAATGTGAAGATTCAGAGCCTTTCCGTCAG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCATGCTGTAAATCCTTaGTCTTTTGCTTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGHAVNP*SFAWCI
Trigger: TATACACCAAGCAAAAGATCAAGGATTTACAGCATG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACTTTGGGAGTACAGATaGCTTCATTTTACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKLWEYR*LHFTFD
Trigger: GTCAAACGTAAAATGAAGTCATCTGTACTCCCAAAG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACTTCTAGCTGACATTTaGGAGAGATATACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKLLADI*ERYTVG
Trigger: ACCTACTGTATATCTCTCTCAAATGTCAGCTAGAAG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAAAGTTGCTTCTAGCTaGCATTTGAGAGAGATATAC +
Preference number: 4 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNKVASS*HLREIY
Trigger: GTATATCTCTCTCAAATGTCAGCTAGAAGCAACTTT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGTAAAGAGTGGTTGCTaGAAGGTAATTTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNVKSGC*KVIFLG
Trigger: GCCAAGAAAAATTACCTTTCAGCAACCACTCTTTAC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAATTAATTCCTGCATCTaGTGTCCAGTCAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKINSCI*CPVRVI
Trigger: GATTACTCTGACTGGACAGCAGATGCAGGAATTAAT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTGTTTTCCCTGGTATTaGAGATGCATTAGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGCFPWY*RCISFC
Trigger: ACAAAAGCTAATGCATCTGCAATACCAGGGAAAACA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGGCATCACGAATAAGTaGCCGATAATCACTATGAAA +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNGITNK*PIITMK
Trigger: TTTCATAGTGATTATCGGCCACTTATTCGTGATGCC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTGGATTGACCAGGACTaGAAAGAGTATTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNWIDQD*KEYSKL
Trigger: AAGCTTTGAATACTCTTTCCAGTCCTGGTCAATCCA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGAAGTACTTCATCTCTaGTGGGATGCACATTATTTT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNEVLHL*WDAHYF
Trigger: AAAATAATGTGCATCCCATCAGAGATGAAGTACTTC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR TCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAATACTATATTCCATCTTaGACCTATTTTCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKYYIPS*TYFLGS
Trigger: GGAGCCAAGAAAATAGGTTCAAGATGGAATATAGTA...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAATCACAACTTCCAGCTaGTATCATGGTATTCTCATA +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKITTSS*YHGILI
Trigger: TATGAGAATACCATGATAGCAGCTGGAAGTTGTGAT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAAGGAGTCTCTTCCAATaGAGATCTTGTACGATAATT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKRSLFQ*RSCTII
Trigger: AATTATCGTACAAGATCTGCATTGGAAGAGACTCCT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAATACTCACTGTTCTACTaGAGTGTGTACAAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKYSLFY*SVYKVY
Trigger: ATAAACCTTGTACACACTGCAGTAGAACAGTGAGTA...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACACGAAGTACTATATTaGAAGGAACAGAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKHEVLY*KEQRFC
Trigger: ACAAAACCTCTGTTCCTTGCAATATAGTACTTCGTG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTGGCACAATCATTAAATaGAGTTTTTCTTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGGTIIK*SFSLGC
Trigger: ACACCCTAAAGAAAAACTCCATTTAATGATTGTGCC...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAATCACTCAAGTATCTTaGTCCTTTCAACCTACTCAA +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKITQVS*SFQPTQ
Trigger: TTGAGTAGGTTGAAAGGACCAAGATACTTGAGTGAT...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAATTAGTTCAGATCACTTaGAAATTAGGGGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKLVQIT*KLGELR
Trigger: CCTTAGTTCCCCTAATTTCCAAGTGATCTGAACTAA...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
3UTR CAA 72 bp CAGCTCACAAATATTCCACATACTTATTTACTTGGATaGGAGGAAGACAGTTTTATAATAATGCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QLTNIPHTYLLG*EEDSFIIMPAV
Trigger: GACTGCTGGCATTATTATAAAACTGTCTTCCTCCAATCCAAGTAAATAAGTATGTGGAATATTTGTGAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTGCATCTGCCTTATATaGATGTACTATATTCCATCT +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNCICLI*MYYIPS
Trigger: AGATGGAATATAGTACATGCATATAAGGCAGATGCA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR GCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTTACATAATGGTATCTaGCATATGACCACTTTGGTA +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLHNGI*HMTTLV
Trigger: TACCAAAGTGGTCATATGGCAGATACCATTATGTAA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CCA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATAAATTTTGCAGGTCTTaGGTTTATTTTAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: STAKSQQCSQDLENGLLNKFCRS*VYFKGS
Trigger: GGAACCCTTAAAATAAACCCAAGACCTGCAAAATTT...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 90 bp CCGATCGCAGCTCCGAGAGGCCTTTCCTCTCACAAGACATGTTTATaGGTCACTTCAGGGCCGCCGACGGGACACCCCGCCGCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: PIAAPRGLSSHKTCL*VTSGPPTGHPAAEG
Trigger: CCCCTCGGCGGCGGGGTGTCCCGTCGGCGGCCCTGAAGTGACCCATAAACATGTCTTGTGAGAGGAAAGGCCTCTCGGAGCTGCGATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 90 bp CGGGTACTACCACCCTTCGACTCCAAGCTACCAGATCCCGCTCTGTaGCTATTTCACTTCTTGGTGCGTTGCTGTGCATTTGCCGTACAC +
Preference number: 5 (lower is better)
Translates to: RVLPPFDSKLPDPAL*LFHFLVRCCAFAVH
Trigger: GTGTACGGCAAATGCACAGCAACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATCTGGTAGCTTGGAGTCGAAGGGTGGTAGTACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp AAACAGAGTATCCGCAATGCTGGGTGGGCTACCATAGTTAACTGGTaGCTCAGGTGGTCTTCCACAGTGCAACGCAGCCAGAGCAGATCC +
Preference number: 5 (lower is better)
Translates to: KQSIRNAGWATIVNW*LRWSSTVQRSQSRS
Trigger: GGATCTGCTCTGGCTGCGTTGCACTGTGGAAGACCACCTGAGTCACCAGTTAACTATGGTAGCCCACCCAGCATTGCGGATACTCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTATACATGGGATAGGCTaGCAGATCCACGGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSIHGIG*QIHGGH
Trigger: GTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTAT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp ATTTTGACTCCTCTTGCCAGATCCCACACTATCACGTTTCCATCATaGCCAGCAGAAAAGAGAACTCTAGGATCGAACGGGTGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: ILTPLARSHTITFPS*PAEKRTLGSNGCGS
Trigger: TGAACCACACCCGTTCGATCCTAGAGTTCTCTTTTCTGCTGGTCATGATGGAAACGTGATAGTGTGGGATCTGGCAAGAGGAGTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp GGTCTTGCTCCTGTTGTAGTCTTTGAATCATGCTGTCCAGTGGGCTaGTCTCCTGGTTTGCTTGCTGACTTAAAACTTGATTCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLAPVVVFESCCPVG*SPGLLADLKLDSVL
Trigger: CAGGACTGAATCAAGTTTTAAGTCAGCAAGCAAACCAGGAGATCAGCCCACTGGACAGCATGATTCAAAGACTACAACAGGAGCAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp CATCACTGTGCCATGCTCTCTCTTCTTCTTCGGATGTTCCACCACTaGCAGCAACTACTTCGCCTTCATCTGAAGAACTACTGCCATTTT +
Preference number: 5 (lower is better)
Translates to: HHCAMLSLLLRMFHH*QQLLRLHLKNYCHF
Trigger: AAAATGGCAGTAGTTCTTCAGATGAAGGCGAAGTAGTTGCTGTCAGTGGTGGAACATCCGAAGAAGAAGAGAGAGCATGGCACAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 90 bp ACACATTTAACCCTGACCCCTCCACTCTATGTAGAGCTTTCAGTGTaGCCTCACTATATCATTACACCAAACCCAAGTCTCATCTCCCAG +
Preference number: 5 (lower is better)
Translates to: THLTLTPPLYVELSV*PHYIITPNPSLISQ
Trigger: CTGGGAGATGAGACTTGGGTTTGGTGTAATGATATAGTGAGGCCACACTGAAAGCTCTACATAGAGTGGAGGGGTCAGGGTTAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS-3UTR CAA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTTCTTCATCCCTGGGATaGGTACCCCATTCTCCATCA +
Preference number: 5 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSSSSLG*VPHSPS
Trigger: TGATGGAGAATGGGGTACCAATCCCAGGGATGAAGA...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp CCTTCAATTTGTCCACTACGTCTTAGTCCTACGTTTGGTGGTGAATaGACCTCTGAGGTAGAACTTATGGAGCCTCTACTTAAACGGCTG +
Preference number: 5 (lower is better)
Translates to: PSICPLRLSPTFGGE*TSEVELMEPLLKRL
Trigger: CAGCCGTTTAAGTAGAGGCTCCATAAGTTCTACCTCAGAGGTTCATTCACCACCAAACGTAGGACTAAGACGTAGTGGACAAATTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTGTCTTAGTCCTACGTTaGGTGGTGAATGAACCTCTG +
Preference number: 5 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSVLVLR*VVNEPL
Trigger: CAGAGGTTCATTCACCACCAAACGTAGGACTAAGAC...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTATCAGGGTACTCAAGTaGAAGAGGTTCCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSIRVLK*KRFLAF
Trigger: GAAAGCCAGGAACCTCTTCAACTTGAGTACCCTGAT...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp TTAAAACTTGATTCAGTCCTGAGGAAGTTACTCCCATCTGAGGGATaGGTTGCTCCTCCCTGCAATTTTCACGGCCAGGAACTAATCTTT +
Preference number: 5 (lower is better)
Translates to: LKLDSVLRKLLPSEG*VAPPCNFHGQELIF
Trigger: AAAGATTAGTTCCTGGCCGTGAAAATTGCAGGGAGGAGCAACTCATCCCTCAGATGGGAGTAACTTCCTCAGGACTGAATCAAGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp CTTCTGGTTCGAACCACAGAACTAGATTCTGTTTTACCGTTTATCTaGGCAGCATTGTGTCTTGGCGGTATTGATCGTGTAGGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: LLVRTTELDSVLPFI*AALCLGGIDRVGVE
Trigger: CTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCGAACCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS GCA 90 bp ATTCTTAGGAACTTTCTTTGGTGGCTGCAGATTAATTCCTGCATCTaGTGTCCAGTCAGAGTAATCACTGGAGTAGTCACTAGAACTGCC +
Preference number: 5 (lower is better)
Translates to: ILRNFLWWLQINSCI*CPVRVITGVVTRTA
Trigger: GGCAGTTCTAGTGACTACTCCAGTGATTACTCTGACTGGACAGCAGATGCAGGAATTAATCTGCAGCCACCAAAGAAAGTTCCTAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCCATCAGGAGAGCATTaGCAGTCAAATACTGCGCCA +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKPSGEH*QSNTAP
Trigger: TGGCGCAGTATTTGACTGCAAATGCTCTCCTGATGG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGGTTCCTGGCTTTCGATaGTTCCAAACCACCAGGCAT +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKVPGFR*FQTTRH
Trigger: ATGCCTGGTGGTTTGGAACAATCGAAAGCCAGGAAC...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCTGTTTCTTCCATGCTaGAATATCGTAAGACTGGGC +
Preference number: 5 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSLFLPC*NIVRLG
Trigger: GCCCAGTCTTACGATATTCAAGCATGGAAGAAACAG...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGACAGTTTTCACACTTaGCAAAACACACAGGGCACT +
Preference number: 5 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPADSFHT*QNTQGT
Trigger: AGTGCCCTGTGTGTTTTGCAAAGTGTGAAAACTGTC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGGCCGCAAGACACAGCTaGTCTGGAAGCTACACATTA +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKAARHS*SGSYTL
Trigger: TAATGTGTAGCTTCCAGACAAGCTGTGTCTTGCGGC...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 90 bp TCTTCTTCTAGGCTGATGGTCCTTCCTTTTTCGAGTAGAAGTTCCTaGCACATCAGCATCTTTCTCTTCATCCTCAGAATCAGACAAAAC +
Preference number: 5 (lower is better)
Translates to: SSSRLMVLPFSSRSS*HISIFLFILRIRQN
Trigger: GTTTTGTCTGATTCTGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATAGAAGAACAGATCATTaGAACTCCAGGCCGAGGGCG +
Preference number: 5 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNRRTDH*NSRPRA
Trigger: CGCCCTCGGCCTGGAGTTCAAATGATCTGTTCTTCT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTATTCCTTGAAGGTTTaGGCCTGCTGGACGAGTAGC +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSYSLKV*ACWTSS
Trigger: GCTACTCGTCCAGCAGGCCAAAACCTTCAAGGAATA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTCTACAACCACTCGGTaGCTTCTGGTTCGAACCACA +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSSTTTR*LLVRTT
Trigger: TGTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAGA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATCCCTCTTCACAAGTTTaGATGGCTGTCCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNPSSQV*MAVLHG
Trigger: GCCATGGAGGACAGCCATCAAAACTTGTGAAGAGGG...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCTTCTCCTTAACACTTaGACACTTGCAGGGACTAGG +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLLLNT*TLAGTR
Trigger: CCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAAG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCGAACAACAGCTGCCTTaGCTCCTCTTCAGAGTCATC +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSEQQLP*LLFRVI
Trigger: GATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTC...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 90 bp CAACAAAATGCTCTTCCACTCTCTTCGTTTAAATTGCCAAATACGTaGTGTCCCATCACGACTGCCACTTACAAACCTGTTACTAGTGTT +
Preference number: 5 (lower is better)
Translates to: QQNALPLSSFKLPNT*CPITTATYKPVTSV
Trigger: AACACTAGTAACAGGTTTGTAAGTGGCAGTCGTGATGGGACAGCACGTATTTGGCAATTTAAACGAAGAGAGTGGAAGAGCATTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 90 bp GATTGGTACCCCATTCTCCATCAAGAGGTTTATAGATTAGTGATCTaGACTCACCATCAGTTAAAGGAACACTGGTACCTAGTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: DWYPILHQEVYRLVI*THHQLKEHWYLVLQ
Trigger: CTGAAGAACTAGGTACCAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTAATCTATAAACCTCTTGATGGAGAATGGGGTACCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS GCA 90 bp GATTTCACAATAGGGCTTCCAGGCTCATTAAATGTTCGTGTATTATaGTCTATATATCGAACTTCCCACATTAGGGAAGAAACCCGCCTG +
Preference number: 5 (lower is better)
Translates to: DFTIGLPGSLNVRVL*SIYRTSHIREETRL
Trigger: CAGGCGGGTTTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTCCCATTCAGCTTCCTaGAAAACAGAGTATCCGCAA +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKSHSAS*KTEYPQ
Trigger: TTGCGGATACTCTGTTTTCAAGGAAGCTGAATGGGA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TACTGCAGTGTGTACAAGGTTTATCTCTGGAGCGCCAAAAGTGGTACTTACAGTCTTTACATAACTCCATaGGTGACTCATAATTCCCAG +
Preference number: 5 (lower is better)
Translates to: YCSVYKVYLWSAKSGTYSLYITP*VTHNSQ
Trigger: CTGGGAATTATGAGTCACCAATGGAGTTATGTAAAG...ACTGTAAGTACCACTTTTGGCGCTCCAGAGATAAACCTTGTACACACTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCCCTGGTACAAGAGCGTaGTTCTTACAATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSPGTRA*FLQSPC
Trigger: GCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGG...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGAGCTGTCCTTCGACCTaGATTTCTAGTTCTCATGTG +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKSCPST*ISSSHV
Trigger: CACATGAGAACTAGAAATCAAGGTCGAAGGACAGCT...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCTTTTCATCTGGGACTaGAGAATGTTGGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLFIWD*RMLELR
Trigger: CCTCAACTCCAACATTCTCAAGTCCCAGATGAAAAG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTAATCACTCAAGTATCTaGGTCCTTTCAACCTACTCA +
Preference number: 5 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPANHSSI*VLSTYS
Trigger: TGAGTAGGTTGAAAGGACCAAGATACTTGAGTGATT...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 90 bp CAAGTGTCCAAGAATTCGTTTATGCATTTTCATGTGCTGATACACTaGAGTTGGAACAAGTCGCTCAAGTCTGTATTTCCCATTCAGCTT +
Preference number: 5 (lower is better)
Translates to: QVSKNSFMHFHVLIH*SWNKSLKSVFPIQL
Trigger: AAGCTGAATGGGAAATACAGACTTGAGCGACTTGTTCCAACTGCAGTGTATCAGCACATGAAAATGCATAAACGAATTCTTGGACACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 90 bp TTAGCTTTTGTAATAAAAGTCTTTGCAGCTGAAGAAGTAGATGGTTaGTCAGTGACAACTGGATCTACAACCACTCGGTTGCTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LAFVIKVFAAEEVDG*SVTTGSTTTRLLLV
Trigger: AACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTTTTATTACAAAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGCTGATACACTGCAGTaGGAACAAGTCGCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNADTLQ*EQVAQV
Trigger: GACTTGAGCGACTTGTTCCAACTGCAGTGTATCAGC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATTGCGTTGCTGTGCATTaGCCGTACACCTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNCVAVH*PYTFNL
Trigger: CAAATTGAAGGTGTACGGCAAATGCACAGCAACGCA...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAATCACTTCTTGGTGCGTaGCTGTGCATTTGCCGTACA +
Preference number: 5 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKSLLGA*LCICRT
Trigger: TGTACGGCAAATGCACAGCAACGCACCAAGAAGTGA...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATAGTTCTCCATTCTTCTaGCCTACTGGCTACACCAGC +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNSSPFF*PTGYTS
Trigger: GCTGGTGTAGCCAGTAGGCAAGAAGAATGGAGAACT...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCTTCCAATGCAGATCTaGTACGATAATTGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPALPMQI*YDNCVD
Trigger: ATCAACACAATTATCGTACAAGATCTGCATTGGAAG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCTGCTTTCTGCTTTCTaGGTTTTATTCTTAGGAACT +
Preference number: 5 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPALLSAF*VLFLGT
Trigger: AGTTCCTAAGAATAAAACCAAGAAAGCAGAAAGCAG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTAAAGAGTGGACGCCTTaGGGAGTACAGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGKEWTP*GVQMTS
Trigger: TGAAGTCATCTGTACTCCCAAAGGCGTCCACTCTTT...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGTCTTCATCTTCCTTTaGGGCTTCCTACCTCCACGA +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNVFIFL*GFLPPR
Trigger: TCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGAC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCCATGCACTAAGTATTaGGTCTGTGCCATAAGGTTA +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKPCTKY*VCAIRL
Trigger: TAACCTTATGGCACAGACCAAATACTTAGTGCATGG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTGTACTATATTCCATCTaGAACCTATTTTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPAVLYSI*NLFSWL
Trigger: GAGCCAAGAAAATAGGTTCAAGATGGAATATAGTAC...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CAGCAGCAAGGAAGCAGAAGCCTTAGTTCTACTTATTCCTTAACTGTACCTGCTCTCCATGTGCTTAATTaGAAATGTTATGGCCTTATG +
Preference number: 5 (lower is better)
Translates to: QQQGSRSLSSTYSLTVPALHVLN*KCYGLM
Trigger: CATAAGGCCATAACATTTCAAATTAAGCACATGGAG...AGCAGGTACAGTTAAGGAATAAGTAGAACTAAGGCTTCTGCTTCCTTGCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 90 bp TTGGCCTTCAATCATATTGAAATAAGATCGTATTTTGACTCCTCTTaGCAGATCCCACACTATCACGTTTCCATCATGACCAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LAFNHIEIRSYFDSS*QIPHYHVSIMTSRK
Trigger: TTTTCTGCTGGTCATGATGGAAACGTGATAGTGTGGGATCTGGCAAGAGGAGTCAAAATACGATCTTATTTCAATATGATTGAAGGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTACTGCGCCATGTCCTaGGCCTTCAATCATATTGAA +
Preference number: 5 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGYCAMS*AFNHIE
Trigger: TTCAATATGATTGAAGGCCAAGGACATGGCGCAGTA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTTTGTCTGTTGCTTTTaGGATTCTCCAAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSFVCCF*DSPRSR
Trigger: CCTGGATCTTGGAGAATCCAAAAAGCAACAGACAAA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTCCATCGCCTGTATTTaGCATCATCAAATTGTTGTC +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKSIACI*HHQIVV
Trigger: GACAACAATTTGATGATGCAAAATACAGGCGATGGA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTTTTCCTTTCAGGGCTaGATGCAGCACTACTGGAAA +
Preference number: 5 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGFSFQG*MQHYWK
Trigger: TTTCCAGTAGTGCTGCATCAAGCCCTGAAAGGAAAA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCAGAATTCTCTAGTATaGTTTTCCCTGGTATTGCAG +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKQNSLV*FSLVLQ
Trigger: CTGCAATACCAGGGAAAACAATACTAGAGAATTCTG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCATGACTAAAACTGGATaGACCAGGACTGGAAAGAGT +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSMTKTG*TRTGKS
Trigger: ACTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCAT...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTTGGTAAGCAGCTTGTaGAGATTATGTACTAAGTGC +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKLVSSL*RLCTKC
Trigger: GCACTTAGTACATAATCTCAACAAGCTGCTTACCAA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATGCTTGCAGCTTTTATTaGTGCGTAGTAAAGACTGTC +
Preference number: 5 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNACSFY*CVVKTV
Trigger: GACAGTCTTTACTACGCACAAATAAAAGCTGCAAGC...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTTTCCACACAACATGCTaGCAGCTTTTATTTGTGCGT +
Preference number: 5 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGFHTTC*QLLFVR
Trigger: ACGCACAAATAAAAGCTGCAAGCATGTTGTGTGGAA...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATCTCTCTTCGTTTAAATaGCCAAATACGTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLSSFK*PNTCCP
Trigger: GGGACAGCACGTATTTGGCAATTTAAACGAAGAGAG...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAAGCTATCTTGTCATATTaGCTACTGGACCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKAILSY*LLDPKP
Trigger: TGGCTTTGGGTCCAGTAGCAAATATGACAAGATAGC...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCATGAGCATGATTCTTaGAGACAGTGGGTATTTTAT +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKHEHDS*RQWVFY
Trigger: ATAAAATACCCACTGTCTCAAAGAATCATGCTCATG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTTGTACTTAGATCCGTaGGATATGCCACTACTGTGC +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNLYLDP*DMPLLC
Trigger: GCACAGTAGTGGCATATCCAACGGATCTAAGTACAA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTCCATGGCCATTTACTaGAATGGTTCCTGGTACAAG +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNSMAIY*NGSWYK
Trigger: CTTGTACCAGGAACCATTCAAGTAAATGGCCATGGA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAATGGGGTTCAGAGCCTTaGAGTTCTTCAAACTCTTCT +
Preference number: 5 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKWGSEP*SSSNSS
Trigger: AGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCCA...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGTCTTTAGGGTGTATATaGACATACCAGCATGATAAG +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKSLGCI*TYQHDK
Trigger: CTTATCATGCTGGTATGTCAATATACACCCTAAAGA...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGGTAATGACTTTTCATTaGGAGCAAACTTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKVMTFH*EQTLLS
Trigger: ACTGAGCAAAGTTTGCTCCAAATGAAAAGTCATTAC...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GGTATCTGCCATATGACCACTTTGGTAAGCAGCTTGTTGAGATTATGTACTAAGCAATTTGACCTTTTCTaGGGTACTATACATAGTTCG +
Preference number: 5 (lower is better)
Translates to: GICHMTTLVSSLLRLCTKQFDLF*GTIHSS
Trigger: CGAACTATGTATAGTACCCAAGAAAAGGTCAAATTG...CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGTGGTCATATGGCAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 90 bp AAATATCCGTCTGCCAGTTCGATCAAAAGTTACACAGTACACAGATaGCAAGTGTCCAAGAATTCGTTTATGCATTTTCATGTGCTGATA +
Preference number: 5 (lower is better)
Translates to: KYPSASSIKSYTVHR*QVSKNSFMHFHVLI
Trigger: TATCAGCACATGAAAATGCATAAACGAATTCTTGGACACTTGTCATCTGTGTACTGTGTAACTTTTGATCGAACTGGCAGACGGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATGCAGTTATAACTGTATaGTCATGTCGATCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNAVITV*SCRSQA
Trigger: AGCTTGGGATCGACATGACAATACAGTTATAACTGC...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp CTAATGAACCAGCATTTACATAATGGTATCTGCCATATGACCACTTTGGTAAGCTTTAGTTCAGATCACTaGGAAATTAGGGGAACTAAG +
Preference number: 5 (lower is better)
Translates to: LMNQHLHNGICHMTTLVSFSSDH*EIRGTK
Trigger: CTTAGTTCCCCTAATTTCCAAGTGATCTGAACTAAA...GCTTACCAAAGTGGTCATATGGCAGATACCATTATGTAAATGCTGGTTCATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTCAGAGGTTTTGTGCTTaGGTCTTTAATCTTACTTCC +
Preference number: 5 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGQRFCA*VFNLTS
Trigger: GGAAGTAAGATTAAAGACCAAAGCACAAAACCTCTG...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATACACGAAGTACTATATaGCAAGGAACAGAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNTRSTI*QGTEVL
Trigger: CAAAACCTCTGTTCCTTGCAATATAGTACTTCGTGT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATAACCTGTTACTAGTGTaGGAAAACTGGATACTGTCA +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNNLLLV*ENWILS
Trigger: TGACAGTATCCAGTTTTCCAACACTAGTAACAGGTT...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATATAGGCTTCATGTCCTaGTCGGAAATAATAAACCTC +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNIGFMS*SEIINL
Trigger: GAGGTTTATTATTTCCGACAAGGACATGAAGCCTAT...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCTGATCCAAGTTACTGTGCTTTACTAAGAAACCAGTGTCTAATAATGTCCAAACTAAATCTTCTGGCTTaGCATACTGTAGCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: SDPSYCALLRNQCLIMSKLNLLA*HTVAFW
Trigger: CCAAAAAGCTACAGTATGCAAAGCCAGAAGATTTAG...TTTGGACATTATTAGACACTGGTTTCTTAGTAAAGCACAGTAACTTGGATCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp GTCTTTAATCTTACTTCCGTTAAATACTGGGGAATCCTGGGTCATAAAATTGGTATAGCCTTTCCAATATaGAAAAGTGTATGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: VFNLTSVKYWGILGHKIGIAFPI*KSVCCP
Trigger: AGGACAGCATACACTTTTCAATATTGGAAAGGCTAT...ACCAATTTTATGACCCAGGATTCCCCAGTATTTAACGGAAGTAAGATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TTAAAAAGCTATGTATCTATTGCCCAGGGCTGTGAGTCTCTGATTAGACTAAATACTTTGGTAAGCAGCTaGTTGAGATTATGTACTAAG +
Preference number: 5 (lower is better)
Translates to: LKSYVSIAQGCESLIRLNTLVSS*LRLCTK
Trigger: CTTAGTACATAATCTCAACAAGCTGCTTACCAAAGT...ATTTAGTCTAATCAGAGACTCACAGCCCTGGGCAATAGATACATAGCTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS-3UTR CAA 90 bp TCAACTGCAAAATCTCAGCAATGCAGTCAAGATCTGGAAAATGGTTTACTTAATTCATGCTGTAAATCCTaGATCTTTTGCTTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: STAKSQQCSQDLENGLLNSCCKS*IFCLVY
Trigger: ATACACCAAGCAAAAGATCAAGGATTTACAGCATGA...ATTAAGTAAACCATTTTCCAGATCTTGACTGCATTGCTGAGATTTTGCAGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp CCGCCGCCGAGGGGAAGCGGGGACGGTGCCGCCGCCTaGCCTATAGCTGTCAGTGTGTGTTCACGAGCCGAG +
Preference number: 6 (lower is better)
Translates to: PPPRGSGDGAAA*PIAVSVCSRAE
Trigger: CTCGGCTCGTGAACACACACTGACAGCTATAGGGCAGGCGGCGGCACCGTCCCCGCTTCCCCTCGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp GGTAGGTCCTGGGATGCTCCTTCCCGGTCCAGTCGGTaGGCCGGGGCAGCAGCTCCTTCTCGGCCACCTCGC +
Preference number: 6 (lower is better)
Translates to: GRSWDAPSRSSR*AGAAAPSRPPR
Trigger: GCGAGGTGGCCGAGAAGGAGCTGCTGCCCCGGCGCACCGACTGGACCGGGAAGGAGCATCCCAGGACCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 72 bp GCTCCGAGAGGCCTTTCCTCTCACAAGACATGTTTATaGGTCACTTCAGGGCCGCCGACGGGACACCCCGCC +
Preference number: 6 (lower is better)
Translates to: APRGLSSHKTCL*VTSGPPTGHPA
Trigger: GGCGGGGTGTCCCGTCGGCGGCCCTGAAGTGACCCATAAACATGTCTTGTGAGAGGAAAGGCCTCTCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 72 bp CCACCCTTCGACTCCAAGCTACCAGATCCCGCTCTGTaGCTATTTCACTTCTTGGTGCGTTGCTGTGCATTT +
Preference number: 6 (lower is better)
Translates to: PPFDSKLPDPAL*LFHFLVRCCAF
Trigger: AAATGCACAGCAACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATCTGGTAGCTTGGAGTCGAAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 72 bp GATTCAGTCCTGAGGAAGTTACTCCCATCTGAGGGATaGGTTGCTCCTCCCTGCAATTTTCACGGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: DSVLRKLLPSEG*VAPPCNFHGQE
Trigger: TTCCTGGCCGTGAAAATTGCAGGGAGGAGCAACTCATCCCTCAGATGGGAGTAACTTCCTCAGGACTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 72 bp CCTCTTGCCAGATCCCACACTATCACGTTTCCATCATaGCCAGCAGAAAAGAGAACTCTAGGATCGAACGGG +
Preference number: 6 (lower is better)
Translates to: PLARSHTITFPS*PAEKRTLGSNG
Trigger: CCCGTTCGATCCTAGAGTTCTCTTTTCTGCTGGTCATGATGGAAACGTGATAGTGTGGGATCTGGCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 72 bp CCAGAACGTCTCAGGTCTTGCTCCTGTTGTAGTCTTTaGATCATGCTGTCCAGTGGGCTGATCTCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: PERLRSCSCCSL*IMLSSGLISWF
Trigger: AAACCAGGAGATCAGCCCACTGGACAGCATGATTCAAAGACTACAACAGGAGCAAGACCTGAGACGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp GATCCCGCTCTGTGGCTATTTCACTTCTTGGTGCGTTaGTGTGCATTTGCCGTACACCTTCAATTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: DPALWLFHFLVR*CAFAVHLQFVH
Trigger: GTGGACAAATTGAAGGTGTACGGCAAATGCACAGCAACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp ACTGGAGTAGTCACTAGAACTGCCATCACTGTGCCATaGTCTCTCTTCTTCTTCGGATGTTCCACCACTGAC +
Preference number: 6 (lower is better)
Translates to: TGVVTRTAITVP*SLFFFGCSTTD
Trigger: GTCAGTGGTGGAACATCCGAAGAAGAAGAGAGAGCATGGCACAGTGATGGCAGTTCTAGTGACTACTCCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 72 bp TTAGATCCGTTGGATATGCCACTACTGTGCAATACATaGGATAGGCTTGCAGATCCACGGGGGCCACAAATG +
Preference number: 6 (lower is better)
Translates to: LDPLDMPLLCNT*DRLADPRGPQM
Trigger: CATTTGTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATTGCACAGTAGTGGCATATCCAACGGATCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CAA 72 bp AAGCTACCAGATCCCGCTCTGTGGCTATTTCACTTCTaGGTGCGTTGCTGTGCATTTGCCGTACACCTTCAA +
Preference number: 6 (lower is better)
Translates to: KLPDPALWLFHF*VRCCAFAVHLQ
Trigger: TTGAAGGTGTACGGCAAATGCACAGCAACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATCTGGTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 72 bp GCCATGCTCTCTCTTCTTCTTCGGATGTTCCACCACTaGCAGCAACTACTTCGCCTTCATCTGAAGAACTAC +
Preference number: 6 (lower is better)
Translates to: AMLSLLLRMFHH*QQLLRLHLKNY
Trigger: GTAGTTCTTCAGATGAAGGCGAAGTAGTTGCTGTCAGTGGTGGAACATCCGAAGAAGAAGAGAGAGCATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp TACCAGATCCCGCTCTGTGGCTATTTCACTTCTTGGTaGGTTGCTGTGCATTTGCCGTACACCTTCAATTTG +
Preference number: 6 (lower is better)
Translates to: YQIPLCGYFTSW*VAVHLPYTFNL
Trigger: CAAATTGAAGGTGTACGGCAAATGCACAGCAACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 72 bp ACCCTGACCCCTCCACTCTATGTAGAGCTTTCAGTGTaGCCTCACTATATCATTACACCAAACCCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: TLTPPLYVELSV*PHYIITPNPSL
Trigger: GAGACTTGGGTTTGGTGTAATGATATAGTGAGGCCACACTGAAAGCTCTACATAGAGTGGAGGGGTCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS CAA 72 bp CAAGTCGCTCAAGTCTGTATTTCCCATTCAGCTTCCTaGAAAACAGAGTATCCGCAATGCTGGGTGGGCTAC +
Preference number: 6 (lower is better)
Translates to: QVAQVCISHSAS*KTEYPQCWVGY
Trigger: GTAGCCCACCCAGCATTGCGGATACTCTGTTTTCAAGGAAGCTGAATGGGAAATACAGACTTGAGCGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 72 bp ACCGTTTATCTGAGCAGCATTGTGTCTTGGCGGTATTaGTCGTGTAGGTGTAGAGAATGCAGAGGTAGAGCT +
Preference number: 6 (lower is better)
Translates to: TVYLSSIVSWRY*SCRCRECRGRA
Trigger: AGCTCTACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS TCA 72 bp CTCCTCCTTATAAACCCAATTAGTGGTCAAGGGCTGTaGACTCTATCCTCAAGTATGTCTGGGCATCTGTCC +
Preference number: 6 (lower is better)
Translates to: LLLINPISGQGL*TLSSSMSGHLS
Trigger: GGACAGATGCCCAGACATACTTGAGGATAGAGTTCACAGCCCTTGACCACTAATTGGGTTTATAAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS GCA 72 bp ACCCAAGTCTCATCTCCCAGTCTTTGCTTAGGTATCTaGTGTGCTTCTTCCATTCCTCAGTCTTCAAACAGC +
Preference number: 6 (lower is better)
Translates to: TQVSSPSLCLGI*CASSIPQSSNS
Trigger: GCTGTTTGAAGACTGAGGAATGGAAGAAGCACAGCAGATACCTAAGCAAAGACTGGGAGATGAGACTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS CCA 72 bp TGGCTGTCCTCCATGGCCATTTACTTGAATGGTTCCTaGTACAAGAGCGTTGTTCTTACAATCTCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: WLSSMAIYLNGS*YKSVVLTISLL
Trigger: GAGCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCCATGGAGGACAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CAA 72 bp GGTTGCTCAGTGACAACTGGATCTACAACCACTCGGTaGCTTCTGGTTCGAACCACAGAACTAGATTCTGTT +
Preference number: 6 (lower is better)
Translates to: GCSVTTGSTTTR*LLVRTTELDSV
Trigger: AACAGAATCTAGTTCTGTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS TCA 72 bp TGTCCACTACGTCTTAGTCCTACGTTTGGTGGTGAATaGACCTCTGAGGTAGAACTTATGGAGCCTCTACTT +
Preference number: 6 (lower is better)
Translates to: CPLRLSPTFGGE*TSEVELMEPLL
Trigger: AAGTAGAGGCTCCATAAGTTCTACCTCAGAGGTTCATTCACCACCAAACGTAGGACTAAGACGTAGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CAA 90 bp GAAGTAGATGGTTGCTCAGTGACAACTGGATCTACAACCACTCGGTaGCTTCTGGTTCGAACCACAGAACTAGATTCTGTTTTACCGTTT +
Preference number: 6 (lower is better)
Translates to: EVDGCSVTTGSTTTR*LLVRTTELDSVLPF
Trigger: AAACGGTAAAACAGAATCTAGTTCTGTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CAA 90 bp CTCCTCTTCAGAGTCATCCTCATTATAGAAAGCTGTCCTTCGACCTaGATTTCTAGTTCTCATGTGGGGTTCAGAGCCTTTGAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLFRVILIIESCPST*ISSSHVGFRAFEFF
Trigger: GAAGAACTCAAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCTTTCTATAATGAGGATGACTCTGAAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS TCA 72 bp CCTGTTGTAGTCTTTGAATCATGCTGTCCAGTGGGCTaGTCTCCTGGTTTGCTTGCTGACTTAAAACTTGAT +
Preference number: 6 (lower is better)
Translates to: PVVVFESCCPVG*SPGLLADLKLD
Trigger: ATCAAGTTTTAAGTCAGCAAGCAAACCAGGAGATCAGCCCACTGGACAGCATGATTCAAAGACTACAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp AACTTTCTTTGGTGGCTGCAGATTAATTCCTGCATCTaGTGTCCAGTCAGAGTAATCACTGGAGTAGTCACT +
Preference number: 6 (lower is better)
Translates to: NFLWWLQINSCI*CPVRVITGVVT
Trigger: AGTGACTACTCCAGTGATTACTCTGACTGGACAGCAGATGCAGGAATTAATCTGCAGCCACCAAAGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CCA 72 bp TCCTTGTCGGAAATAATAAACCTCATCACCCATCTGTaGCACAAATGGACATCTTCGGGGAATGGTATCTGT +
Preference number: 6 (lower is better)
Translates to: SLSEIINLITHL*HKWTSSGNGIC
Trigger: ACAGATACCATTCCCCGAAGATGTCCATTTGTGCCACAGATGGGTGATGAGGTTTATTATTTCCGACAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CCA 72 bp GTTTTGATGGCTGTCCTCCATGGCCATTTACTTGAATaGTTCCTGGTACAAGAGCGTTGTTCTTACAATCTC +
Preference number: 6 (lower is better)
Translates to: VLMAVLHGHLLE*FLVQERCSYNL
Trigger: GAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCCATGGAGGACAGCCATCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CAA 72 bp ATCCAACAAAATGCTCTTCCACTCTCTTCGTTTAAATaGCCAAATACGTGCTGTCCCATCACGACTGCCACT +
Preference number: 6 (lower is better)
Translates to: IQQNALPLSSFK*PNTCCPITTAT
Trigger: AGTGGCAGTCGTGATGGGACAGCACGTATTTGGCAATTTAAACGAAGAGAGTGGAAGAGCATTTTGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CAA 72 bp ATTTTTCCGGGCCATTTCGACATAGGCTTCATGTCCTaGTCGGAAATAATAAACCTCATCACCCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: IFPGHFDIGFMS*SEIINLITHLW
Trigger: CCACAGATGGGTGATGAGGTTTATTATTTCCGACAAGGACATGAAGCCTATGTCGAAATGGCCCGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CAA 90 bp CCTCACTATATCATTACACCAAACCCAAGTCTCATCTCCCAGTCTTaGCTTAGGTATCTGCTGTGCTTCTTCCATTCCTCAGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: PHYIITPNPSLISQS*LRYLLCFFHSSVFK
Trigger: TTTGAAGACTGAGGAATGGAAGAAGCACAGCAGATACCTAAGCAAAGACTGGGAGATGAGACTTGGGTTTGGTGTAATGATATAGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS TCA 72 bp CGAACCACAGAACTAGATTCTGTTTTACCGTTTATCTaGGCAGCATTGTGTCTTGGCGGTATTGATCGTGTA +
Preference number: 6 (lower is better)
Translates to: RTTELDSVLPFI*AALCLGGIDRV
Trigger: TACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS GCA 72 bp GTAATAAAAGTCTTTGCAGCTGAAGAAGTAGATGGTTaGTCAGTGACAACTGGATCTACAACCACTCGGTTG +
Preference number: 6 (lower is better)
Translates to: VIKVFAAEEVDG*SVTTGSTTTRL
Trigger: CAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTTTTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS GCA 72 bp AGTCTCATCTCCCAGTCTTTGCTTAGGTATCTGCTGTaGTTCTTCCATTCCTCAGTCTTCAAACAGCTAATA +
Preference number: 6 (lower is better)
Translates to: SLISQSLLRYLL*FFHSSVFKQLI
Trigger: TATTAGCTGTTTGAAGACTGAGGAATGGAAGAAGCACAGCAGATACCTAAGCAAAGACTGGGAGATGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS CAA 72 bp AGAGTCATCCTCATTATAGAAAGCTGTCCTTCGACCTaGATTTCTAGTTCTCATGTGGGGTTCAGAGCCTTT +
Preference number: 6 (lower is better)
Translates to: RVILIIESCPST*ISSSHVGFRAF
Trigger: AAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCTTTCTATAATGAGGATGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS TCA 72 bp AAGTGTCCAAGAATTCGTTTATGCATTTTCATGTGCTaGTACACTGCAGTTGGAACAAGTCGCTCAAGTCTG +
Preference number: 6 (lower is better)
Translates to: KCPRIRLCIFMC*YTAVGTSRSSL
Trigger: CAGACTTGAGCGACTTGTTCCAACTGCAGTGTATCAGCACATGAAAATGCATAAACGAATTCTTGGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS CAA 72 bp ATTGTAGCATTGAAACAGACTATCAGGGTACTCAAGTaGAAGAGGTTCCTGGCTTTCGATTGTTCCAAACCA +
Preference number: 6 (lower is better)
Translates to: IVALKQTIRVLK*KRFLAFDCSKP
Trigger: TGGTTTGGAACAATCGAAAGCCAGGAACCTCTTCAACTTGAGTACCCTGATAGTCTGTTTCAATGCTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS GCA 72 bp AAGAATTCGTTTATGCATTTTCATGTGCTGATACACTaGAGTTGGAACAAGTCGCTCAAGTCTGTATTTCCC +
Preference number: 6 (lower is better)
Translates to: KNSFMHFHVLIH*SWNKSLKSVFP
Trigger: GGGAAATACAGACTTGAGCGACTTGTTCCAACTGCAGTGTATCAGCACATGAAAATGCATAAACGAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp AAATTCTCAAATCAGATGGCAGACACTCATTTACCGTaGAACCTTATACATGTTAACCACTATAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: KFSNQMADTHLP*NLIHVNHYRPQ
Trigger: CTGTGGCCTATAGTGGTTAACATGTATAAGGTTGCACGGTAAATGAGTGTCTGCCATCTGATTTGAGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479165.1
CDS CAA 72 bp TGCAGAATTATTCCTAGTGCCATGACTAAAACTGGATaGACCAGGACTGGAAAGAGTATTCAAAGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: CRIIPSAMTKTG*TRTGKSIQSFG
Trigger: TCCAAAGCTTTGAATACTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS GCA 72 bp AATCATATTGAAATAAGATCGTATTTTGACTCCTCTTaGCAGATCCCACACTATCACGTTTCCATCATGACC +
Preference number: 6 (lower is better)
Translates to: NHIEIRSYFDSS*QIPHYHVSIMT
Trigger: GGTCATGATGGAAACGTGATAGTGTGGGATCTGGCAAGAGGAGTCAAAATACGATCTTATTTCAATATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS GCA 72 bp ATAGGGCTTCCAGGCTCATTAAATGTTCGTGTATTATaGTCTATATATCGAACTTCCCACATTAGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: IGLPGSLNVRVL*SIYRTSHIREE
Trigger: TTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275034.5
ENST00000479165.1
CDS CAA 72 bp CTTCCAATGCAGATCTTGTACGATAATTGTGTTGATTaGTCTGTTGCTTTTTGGATTCTCCAAGATCCAGGA +
Preference number: 6 (lower is better)
Translates to: LPMQILYDNCVD*SVAFWILQDPG
Trigger: TCCTGGATCTTGGAGAATCCAAAAAGCAACAGACAAATCAACACAATTATCGTACAAGATCTGCATTGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275034.5
CDS TCA 72 bp TCTGCCAGTTCGATCAAAAGTTACACAGTACACAGATaGCAAGTGTCCAAGAATTCGTTTATGCATTTTCAT +
Preference number: 6 (lower is better)
Translates to: SASSIKSYTVHR*QVSKNSFMHFH
Trigger: ATGAAAATGCATAAACGAATTCTTGGACACTTGTCATCTGTGTACTGTGTAACTTTTGATCGAACTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275034.5