Pregenerated sensors for PHGR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000233041Ensembl transcript IDs: ENST00000448599.2, ENST00000560745.5
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | CATTCCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTGGGGGTGGCCCGCAGTaGCCTGGAGGATGGCCATGC | + |
Preference number: 4 (lower is better) Translates to: HSRSAGQFSQACHLVSCFGGGPQ*PGGWPC Trigger: GCATGGCCATCCTCCAGGTCACTGCGGGCCACCCCC...AAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | ATTAGGAAGAGAAGATTGTGGTTTAGGCCTCATTCCAGGTCAGCTGGGCAATTCAGGGGGTGGGTGACCTaGGCCATGGCCAGGGGGAGG | + |
Preference number: 4 (lower is better) Translates to: IRKRRLWFRPHSRSAGQFRGWVT*AMARGR Trigger: CCTCCCCCTGGCCATGGCCCAGGTCACCCACCCCCT...GAATTGCCCAGCTGACCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | GGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTACATGTGGACCAGGGGGTaGGTGACCTGGGCCATGGCC | + |
Preference number: 4 (lower is better) Translates to: GQLGNSLRLAILCPVFFYMWTRG*VTWAMA Trigger: GGCCATGGCCCAGGTCACCCACCCCCTGGTCCACAT...GTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR GCA 90 bp | TTAGGAAGAGAAGATTGTGGTTTAGGCCTCATTCCAGGTCAGCTGGGCAATTCTCCTGGAGGATGGCCATaGCCCCCACAGTGGCAGTGC | + |
Preference number: 4 (lower is better) Translates to: LGREDCGLGLIPGQLGNSPGGWP*PPQWQC Trigger: GCACTGCCACTGTGGGGGGCATGGCCATCCTCCAGG...AGAATTGCCCAGCTGACCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR TCA 90 bp | GGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTACCTTCTACTTCCTCAGTaGTGTGGACCAGGGGGTGGG | + |
Preference number: 4 (lower is better) Translates to: GQLGNSLRLAILCPVFFYLLLPQ*CGPGGG Trigger: CCCACCCCCTGGTCCACATCACTGAGGAAGTAGAAG...GTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | CATTCCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTACTTCCTCAGTGATGTaGACCAGGGGGTGGGTGACC | + |
Preference number: 4 (lower is better) Translates to: HSRSAGQFSQACHLVSCFTSSVM*TRGWVT Trigger: GGTCACCCACCCCCTGGTCCACATCACTGAGGAAGT...AAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR TCA 90 bp | TTAGGAAGAGAAGATTGTGGTTTAGGCCTCATTCCAGGTCAGCTGGGCAATTCTAGAGCAGGGAATACCTaGGAGTGCAGAGCAGGGGCA | + |
Preference number: 4 (lower is better) Translates to: LGREDCGLGLIPGQLGNSRAGNT*ECRAGA Trigger: TGCCCCTGCTCTGCACTCTCAGGTATTCCCTGCTCT...AGAATTGCCCAGCTGACCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | CCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTCATTCCAGGTCAGCTaGGCAATTCTCTCAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: PGQLGNSLRLAILCPVFFSFQVS*AILSGL Trigger: CAAGCCTGAGAGAATTGCCCAGCTGACCTGGAATGA...GAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | CAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTACTTCGTGCCCCTTCGGACCTaGGTCCATCTTTTTGGAGTA | + |
Preference number: 4 (lower is better) Translates to: QLGNSLRLAILCPVFFYFVPLRT*VHLFGV Trigger: TACTCCAAAAAGATGGACCCAGGTCCGAAGGGGCAC...GAAGTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | GGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTACAGGAAGAGAAGATTGTaGTTTAGGCCTCATTCCAGG | + |
Preference number: 4 (lower is better) Translates to: GQLGNSLRLAILCPVFFYRKRRL*FRPHSR Trigger: CCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCT...GTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | AGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTACTTCCCTGGGTCCATCTTTTTaGAGTAAGAGCAGGGAATAC | + |
Preference number: 4 (lower is better) Translates to: SWAILSGLPSCVLFSSTSLGPSF*SKSREY Trigger: GTATTCCCTGCTCTTACTCCAAAAAGATGGACCCAG...GGAAGTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR GCA 90 bp | TTAGGAAGAGAAGATTGTGGTTTAGGCCTCATTCCAGGTCAGCTGGGCAATTCTCAATTCTCTCAGGCTTaGCATCTTGTGTCCTGTTTT | + |
Preference number: 4 (lower is better) Translates to: LGREDCGLGLIPGQLGNSQFSQA*HLVSCF Trigger: AAAACAGGACACAAGATGGCAAGCCTGAGAGAATTG...AGAATTGCCCAGCTGACCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CCA 90 bp | CATTCCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTTTAAAGAATAGAATGTaGCCTCTAGGAGGCTGTTTA | + |
Preference number: 4 (lower is better) Translates to: HSRSAGQFSQACHLVSCFLKNRM*PLGGCL Trigger: TAAACAGCCTCCTAGAGGCCACATTCTATTCTTTAA...AAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGGAATG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS CCA 90 bp | TCATTTCGAGGGAAGCCGATGGCACAGCTCCCAAGAACTGGATTCTaGATTCCGACCCAGCTGCACCTCTATGGCCTTTCCCTGAGCATA | + |
Preference number: 5 (lower is better) Translates to: SFRGKPMAQLPRTGF*IPTQLHLYGLSLSI Trigger: TATGCTCAGGGAAAGGCCATAGAGGTGCAGCTGGGTCGGAATCCAGAATCCAGTTCTTGGGAGCTGTGCCATCGGCTTCCCTCGAAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CCA 90 bp | CTTTTGTTCATTTCGAGGGAAGCCGATGGCACAGCTCCCAAGAACTaGATTCTGGATTCCGACCCAGCTGCACCTCTATGGCCTTTCCCT | + |
Preference number: 5 (lower is better) Translates to: LLFISREADGTAPKN*ILDSDPAAPLWPFP Trigger: AGGGAAAGGCCATAGAGGTGCAGCTGGGTCGGAATCCAGAATCCAGTTCTTGGGAGCTGTGCCATCGGCTTCCCTCGAAATGAACAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS TCA 90 bp | ACAAACACACACGCACGTACATTTTTGGCACGCACTAGTTATGGCTaGCTGATAGTCCCTGCCTTTACCGCTCTCCTGCTCTCTCCCTTC | + |
Preference number: 5 (lower is better) Translates to: TNTHARTFLARTSYG*LIVPAFTALLLSPF Trigger: GAAGGGAGAGAGCAGGAGAGCGGTAAAGGCAGGGACTATCAGTCAGCCATAACTAGTGCGTGCCAAAAATGTACGTGCGTGTGTGTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS GCA 90 bp | GTGGTCCTGCATGTTCTGAAGTGCCCCATTGGTGTGGGAATCACCTaGTACTTCTTAAAGGCTAGGACGGTCTTTTGTTCATTTCGAGGG | + |
Preference number: 5 (lower is better) Translates to: VVLHVLKCPIGVGIT*YFLKARTVFCSFRG Trigger: CCCTCGAAATGAACAAAAGACCGTCCTAGCCTTTAAGAAGTAGCAGGTGATTCCCACACCAATGGGGCACTTCAGAACATGCAGGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS-3UTR CAA 90 bp | TCCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTTGTGTCCTGTTTTCTTCTCAGGCTTGCCATCTaGTGTCCTGTTTTCTTCTAC | + |
Preference number: 5 (lower is better) Translates to: SRSAGQFSQACHLVSCFLLRLAI*CPVFFY Trigger: GTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAG...AAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CAA 90 bp | TTAGGAAGAGAAGATTGTGGTTTAGGCCTCATTCCAGGTCAGCTGGGCAATTCTGCAATTCTCTCAGGCTaGCCATCTTGTGTCCTGTTT | + |
Preference number: 5 (lower is better) Translates to: LGREDCGLGLIPGQLGNSAILSG*PSCVLF Trigger: AAACAGGACACAAGATGGCAAGCCTGAGAGAATTGC...AGAATTGCCCAGCTGACCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS-3UTR CAA 90 bp | TTAGGAAGAGAAGATTGTGGTTTAGGCCTCATTCCAGGTCAGCTGGGCAATTCTATTAGGAAGAGAAGATaGTGGTTTAGGCCTCATTCC | + |
Preference number: 5 (lower is better) Translates to: LGREDCGLGLIPGQLGNSIRKRR*WFRPHS Trigger: GGAATGAGGCCTAAACCACAATCTTCTCTTCCTAAT...AGAATTGCCCAGCTGACCTGGAATGAGGCCTAAACCACAATCTTCTCTTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS CCA 72 bp | GGGAAGCCGATGGCACAGCTCCCAAGAACTGGATTCTaGATTCCGACCCAGCTGCACCTCTATGGCCTTTCC | + |
Preference number: 6 (lower is better) Translates to: GKPMAQLPRTGF*IPTQLHLYGLS Trigger: GGAAAGGCCATAGAGGTGCAGCTGGGTCGGAATCCAGAATCCAGTTCTTGGGAGCTGTGCCATCGGCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS TCA 72 bp | CTCCTGCAGCACCCACCTGAGTGGTCCTGCATGTTCTaGAGTGCCCCATTGGTGTGGGAATCACCTGCTACT | + |
Preference number: 6 (lower is better) Translates to: LLQHPPEWSCMF*SAPLVWESPAT Trigger: AGTAGCAGGTGATTCCCACACCAATGGGGCACTTCAGAACATGCAGGACCACTCAGGTGGGTGCTGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CCA 72 bp | AGTGGCAGTGCCCCTTCGGACCTGGGTCCATCTTTTTaGAGTAAGAGCAGGGAATACCTGAGAGTGCAGAGC | + |
Preference number: 6 (lower is better) Translates to: SGSAPSDLGPSF*SKSREYLRVQS Trigger: GCTCTGCACTCTCAGGTATTCCCTGCTCTTACTCCAAAAAGATGGACCCAGGTCCGAAGGGGCACTGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS CCA 72 bp | ATTTCGAGGGAAGCCGATGGCACAGCTCCCAAGAACTaGATTCTGGATTCCGACCCAGCTGCACCTCTATGG | + |
Preference number: 6 (lower is better) Translates to: ISREADGTAPKN*ILDSDPAAPLW Trigger: CCATAGAGGTGCAGCTGGGTCGGAATCCAGAATCCAGTTCTTGGGAGCTGTGCCATCGGCTTCCCTCGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CAA 90 bp | GGCCTCATTCCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTaGTGTCCTGTTTTCTTCTACTTCCTCAGTGATGTGGACCAGGGG | + |
Preference number: 6 (lower is better) Translates to: GLIPGQLGNSLRLAI*CPVFFYFLSDVDQG Trigger: CCCCTGGTCCACATCACTGAGGAAGTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGGAATGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS TCA 72 bp | CACGCACGTACATTTTTGGCACGCACTAGTTATGGCTaGCTGATAGTCCCTGCCTTTACCGCTCTCCTGCTC | + |
Preference number: 6 (lower is better) Translates to: HARTFLARTSYG*LIVPAFTALLL Trigger: GAGCAGGAGAGCGGTAAAGGCAGGGACTATCAGTCAGCCATAACTAGTGCGTGCCAAAAATGTACGTGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CCA 72 bp | CCTCTCAGCCACAGTGCTTACCTGGGTCCATCTTTTTaGAGTAAGAGCAGGGAATACCTGAGAGTGCAGAGC | + |
Preference number: 6 (lower is better) Translates to: PLSHSAYLGPSF*SKSREYLRVQS Trigger: GCTCTGCACTCTCAGGTATTCCCTGCTCTTACTCCAAAAAGATGGACCCAGGTAAGCACTGTGGCTGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CCA 72 bp | CTAGGACGGTCTTTTGTTCATTTCGAGGGAAGCCGATaGCACAGCTCCCAAGAACTGGATTCTGGATTCCGA | + |
Preference number: 6 (lower is better) Translates to: LGRSFVHFEGSR*HSSQELDSGFR Trigger: TCGGAATCCAGAATCCAGTTCTTGGGAGCTGTGCCATCGGCTTCCCTCGAAATGAACAAAAGACCGTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CAA 72 bp | CCAGGTCAGCTGGGCAATTCTCTCAGGCTTGCCATCTaGTGTCCTGTTTTCTTCTACTTCCTCAGTGATGTG | + |
Preference number: 6 (lower is better) Translates to: PGQLGNSLRLAI*CPVFFYFLSDV Trigger: CACATCACTGAGGAAGTAGAAGAAAACAGGACACAAGATGGCAAGCCTGAGAGAATTGCCCAGCTGACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448599.2 |
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CDS GCA 72 bp | CATGTTCTGAAGTGCCCCATTGGTGTGGGAATCACCTaGTACTTCTTAAAGGCTAGGACGGTCTTTTGTTCA | + |
Preference number: 6 (lower is better) Translates to: HVLKCPIGVGIT*YFLKARTVFCS Trigger: TGAACAAAAGACCGTCCTAGCCTTTAAGAAGTAGCAGGTGATTCCCACACCAATGGGGCACTTCAGAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CCA 72 bp | ACATGTTCTACAGTATGTAAGGGCTTGTCTTCATTGTaGACCCCTACCACTGCCTTCATACAAACACACACG | + |
Preference number: 6 (lower is better) Translates to: TCSTVCKGLSSL*TPTTAFIQTHT Trigger: CGTGTGTGTTTGTATGAAGGCAGTGGTAGGGGTCCACAATGAAGACAAGCCCTTACATACTGTAGAACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560745.5 |
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CDS CAA 72 bp | GTAACATGTTCTACAGTATGTAAGGGCTTGTCTTCATaGTGGACCCCTACCACTGCCTTCATACAAACACAC | + |
Preference number: 6 (lower is better) Translates to: VTCSTVCKGLSS*WTPTTAFIQTH Trigger: GTGTGTTTGTATGAAGGCAGTGGTAGGGGTCCACAATGAAGACAAGCCCTTACATACTGTAGAACATGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560745.5 |