RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000010318

Ensembl transcript IDs: ENST00000327906.8, ENST00000347025.6, ENST00000459935.1, ENST00000461861.5, ENST00000465863.1, ENST00000472337.5, ENST00000473145.5, ENST00000482327.5, ENST00000498509.2, ENST00000614886.4, ENST00000615126.1

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTCCTTGTCTCACAGTCCCAGAGTGCTCCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTAC +
Preference number: 1 (lower is better)
Translates to: ASLSHSPRVLPPQTR*RSAASYPIVWDSSY
Trigger: GTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAGACAAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR CCA 90 bp TCTGGACTGCTCCCTCCTCATGCTCCACTGAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTGGCCCTGCTTCCTTGTCTCACAGTC +
Preference number: 1 (lower is better)
Translates to: SGLLPPHAPLRLLFA*LIVSLLALLPCLTV
Trigger: GACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATCTCACAGTCCCAGAGTaGTCCCTCCCCAAACCCGAT +
Preference number: 2 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYLTVPE*SLPKPD
Trigger: ATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAG...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTCTCACAGTCCCAGAGTaGTCCCTCCCCAAACCCGAT +
Preference number: 2 (lower is better)
Translates to: PRVLPPQTRWRSAASYPILTVPE*SLPKPD
Trigger: ATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAG...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR-3UTR TCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTGTGGCTGCAGCAGGTaGACACTCCTCACACTCCCA +
Preference number: 2 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVCGCSR*TLLTLP
Trigger: TGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACA...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR-3UTR GCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCTCACAGTCCCAGAGTaGTCCCTCCCCAAACCCGAT +
Preference number: 2 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVLTVPE*SLPKPD
Trigger: ATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTTCCTTGTTGGCATCTaGACTGCTCCCTCCTCATGC +
Preference number: 2 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIFLVGI*TAPSSC
Trigger: GCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGTTCCTTGTTGGCATCTaGACTGCTCCCTCCTCATGC +
Preference number: 2 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWFLVGI*TAPSSC
Trigger: GCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAA...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 2 (lower is better)
Translates to: PRVLPPQTRWRSAASYPITAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp GAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTCCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGT +
Preference number: 2 (lower is better)
Translates to: EERSFIPYCVGQQLLRRCPQGGR*CCSKGC
Trigger: ACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGG...ACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR-3UTR TCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVLLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 2 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTATAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp TGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCCTGAAATGTTCCTCAGGGTaGAAGGTGCTGCTGCAGCAA +
Preference number: 2 (lower is better)
Translates to: CRNVPQGGRCCCSKGCPLKCSSG*KVLLQQ
Trigger: TTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTT...CAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR CAA 90 bp ATCTGGACTGCTCCCTCCTCATGCTCCACTGAGACTTCTCTTTGCTaGGCTCATAGTCTCACTGCTGGCCCTGCTTCCTTGTCTCACAGT +
Preference number: 2 (lower is better)
Translates to: IWTAPSSCSTETSLC*AHSLTAGPASLSHS
Trigger: ACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 2 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVTAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp TCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCTTCCCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 2 (lower is better)
Translates to: SNKEGSGQSVQERPGFSSQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...GGAAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTACTGAGACTTCTCTTTaGTTGGCTCATAGTCTCACT +
Preference number: 2 (lower is better)
Translates to: PRVLPPQTRWRSAASYPITETSL*LAHSLT
Trigger: AGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCATCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTASYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp TCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCTTCCCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 2 (lower is better)
Translates to: SNKEGSGQSVQERPGFSSPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...GGAAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR-3UTR TCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTAACAACAAACATGGGTaGAGTAAGAAGAGGCATATG +
Preference number: 2 (lower is better)
Translates to: PRVLPPQTRWRSAASYPINNKHG*SKKRHM
Trigger: CATATGCCTCTTCTTACTTCACCCATGTTTGTTGTT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCTGGAAGAATCCTTGGTaGGAGGAGAGGAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLWKNPW*EERRRK
Trigger: CTTTCTCCTCCTCTCCTCCCACCAAGGATTCTTCCA...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRSYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR GCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCTCACAGTCCCAGAGTaGTCCCTCCCCAAACCCGAT +
Preference number: 2 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWELTVPE*SLPKPD
Trigger: ATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: RHSCSHKRISLLASGLLPRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWELLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp TTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTCAGGTATGTAGTCTGTaGCTGCAGCAGGTGAACACT +
Preference number: 2 (lower is better)
Translates to: FIPYCVGQQLLRRCYLDFQVCSL*LQQVNT
Trigger: AGTGTTCACCTGCTGCAGCCACAGACTACATACCTG...AAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGTGGAAGAATCCTTGGTaGGAGGAGAGGAGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEWKNPW*EERRRK
Trigger: CTTTCTCCTCCTCTCCTCCCACCAAGGATTCTTCCA...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp TCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTTTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: SYPIVWDSSYSEGVTWIFSYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...AAAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWESYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWERLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGAAAACAAGATTAAGGTaGAAGAATCCTTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEKTRLR*KNPWWE
Trigger: CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTT...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR TCA 72 bp AGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTCTGTGGCTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: RVEGAAAARDVP*VFRYVVCGCSR
Trigger: CCTGCTGCAGCCACAGACTACATACCTGAAAACTCAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR-3UTR CAA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 3 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 3 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR CCA 72 bp CTCCCTCCTCATGCTCCACTGAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTGGCCCTGCTTCCTTGT +
Preference number: 3 (lower is better)
Translates to: LPPHAPLRLLFA*LIVSLLALLPC
Trigger: ACAAGGAAGCAGGGCCAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR GCA 72 bp CTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTaGAGCAAGGGATGTCCCCTGAGTTTTCAGGTATGT +
Preference number: 3 (lower is better)
Translates to: LCRNVPQGGRCC*SKGCPLSFQVC
Trigger: ACATACCTGAAAACTCAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR GCA 72 bp TGTCTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCCCTGAGTTTTCAGGTA +
Preference number: 3 (lower is better)
Translates to: CLCRNVPQGGRC*CSKGCPLSFQV
Trigger: TACCTGAAAACTCAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR GCA 72 bp TGTTGTCTCTGCAGAAATGTTCCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGTCCCCTGAGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: CCLCRNVPQGGR*CCSKGCPLSFQ
Trigger: CTGAAAACTCAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAGACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR-3UTR CAA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 3 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
3UTR CCA 72 bp ACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAAGGTGTTACTTGGATT +
Preference number: 3 (lower is better)
Translates to: TRWRSAASYPIV*DSSYSEGVTWI
Trigger: AATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
3UTR GCA 72 bp CATTTCCTTGTTGGCATCTGGACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTTTGCTTGGCTCATAGT +
Preference number: 3 (lower is better)
Translates to: HFLVGIWTAPSS*STETSLCLAHS
Trigger: ACTATGAGCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR-3UTR CAA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTTTCTCTTCCAAGGTGTaGTCTCTGCAGAAATGTTCC +
Preference number: 3 (lower is better)
Translates to: RHSCSHKRISLLASGLLPFSSKV*SLQKCS
Trigger: GGAACATTTCTGCAGAGACAACACCTTGGAAGAGAA...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR GCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCGGCTCATGTCGCGCCTaGCGGGCGGCCAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLGSCRA*RAASAG
Trigger: CCCTGCACTGGCCGCCCGGCAGGCGCGACATGAGCC...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAACCCTCCCAGCTGTCTaGGGGCGCCGCTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGTLPAV*GRRCTG
Trigger: TCCAGTACAGCGGCGCCCTCAGACAGCTGGGAGGGT...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR GCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACCAGCAAACAGGCCCTaGAGACGGTTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGPANRP*RRFPLG
Trigger: ACCCAGAGGAAACCGTCTTCAGGGCCTGTTTGCTGG...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGTGTGGCTGCAGCAGGTaGACACTCCTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGCGCSR*TLLTLP
Trigger: TGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACA...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGATGTGGCTGCAGCAGGTaGACACTCCTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGCGCSR*TLLTLP
Trigger: TGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACA...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGGGAGCATCCCGCGGATaGCAGACCAGGCTCATGTCG +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVGASRG*QTRLMS
Trigger: CGACATGAGCCTGGTCTGGCATCCGCGGGATGCTCC...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR GCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGPQGGR*CCSKGC
Trigger: ACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGG...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGCTCACAGTCCCAGAGTaGTCCCTCCCCAAACCCGAT +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLLTVPE*SLPKPD
Trigger: ATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAG...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGCATGGAAGCCTCTGTTaGACTGGCCCCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWHGSLC*TGPSEA
Trigger: TGCCTCAGAGGGGCCAGTCCAACAGAGGCTTCCATG...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCCATGGAAGCCTCTGTTaGACTGGCCCCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSHGSLC*TGPSEA
Trigger: TGCCTCAGAGGGGCCAGTCCAACAGAGGCTTCCATG...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPISLWVP*DPHVAH
Trigger: GTGTGCTACATGCGGATCCCACGGAACCCACAGGGA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSSLWVP*DPHVAH
Trigger: GTGTGCTACATGCGGATCCCACGGAACCCACAGGGA...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYSLWVP*DPHVAH
Trigger: GTGTGCTACATGCGGATCCCACGGAACCCACAGGGA...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGTCTCACTGCTGGCCCTaGTTCCTTGTCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWSHCWP*FLVSQS
Trigger: GGACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGA...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTCTCACTGCTGGCCCTaGTTCCTTGTCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPISHCWP*FLVSQS
Trigger: GGACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTCTCACTGCTGGCCCTaGTTCCTTGTCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSSHCWP*FLVSQS
Trigger: GGACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGA...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCACCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCCAGCAAACAGGCCCTaGAGACGGTTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVPANRP*RRFPLG
Trigger: ACCCAGAGGAAACCGTCTTCAGGGCCTGTTTGCTGG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTTGGACTGGCCCCTCTaGGGCAGCTTACTAGATAAG +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSLDWPL*GSLLDK
Trigger: CTTATCTAGTAAGCTGCCTCAGAGGGGCCAGTCCAA...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCGCAGATGGAAGTTTCTaGGGCACTGATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSADGSF*GTDPSG
Trigger: GCCAGAAGGATCAGTGCCTCAGAAACTTCCATCTGC...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATGCAGATGGAAGTTTCTaGGGCACTGATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYADGSF*GTDPSG
Trigger: GCCAGAAGGATCAGTGCCTCAGAAACTTCCATCTGC...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTCTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPILLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGCCTAGAAGCCCGGGCTaGCTCCTTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLPRSPG*LLFDVF
Trigger: GAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGG...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCCCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLPQGGR*CCSKGC
Trigger: ACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGG...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGTCTCACTGCTGGCCCTaGTTCCTTGTCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQSHCWP*FLVSQS
Trigger: GGACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGA...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAAATACGTGTCGGTGTaGTCACAACCGTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGKYVSV*SQPFPG
Trigger: TCCGGGGAACGGTTGTGACCACACCGACACGTATTT...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCCAAGCTGCCAGGCAGTaGCTTCCTAACCCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLQAARQ*LPNPAD
Trigger: GTCCGCCGGGTTAGGAAGCCACTGCCTGGCAGCTTG...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR CCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGACTTGCGGTGGTAGATaGCTTGACTACAACACGGGC +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLTCGGR*LDYNTG
Trigger: GCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGT...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLSLWVP*DPHVAH
Trigger: GTGTGCTACATGCGGATCCCACGGAACCCACAGGGA...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVSLWVP*DPHVAH
Trigger: GTGTGCTACATGCGGATCCCACGGAACCCACAGGGA...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGAGGAGCAGTCCCTGTaGGTTCCGTGGGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKEEQSL*VPWDPH
Trigger: ATGCGGATCCCACGGAACCCACAGGGACTGCTCCTC...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTTCCTTGTTGGCATCTaGACTGCTCCCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSFLVGI*TAPSSC
Trigger: GCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAA...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTTCCTTGTTGGCATCTaGACTGCTCCCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLFLVGI*TAPSSC
Trigger: GCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAA...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATAGGTGGAAGAATCCTTaGTGGGAGGAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYRWKNP*WEERRR
Trigger: TCTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCT...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTCAGGCAGAAATCCATaGAGCCTCTGTTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPISGRNP*SLCWTG
Trigger: GCCAGTCCAACAGAGGCTCCATGGATTTCTGCCTGA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR TCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGGCCAAGACGTTCCTTaGGTAGGATTCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAGQDVP*VGFCAH
Trigger: GTGTGCACAGAATCCTACTCAAGGAACGTCTTGGCC...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR TCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGCCAGCAAACAGGCCCTaGAGACGGTTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRPANRP*RRFPLG
Trigger: ACCCAGAGGAAACCGTCTTCAGGGCCTGTTTGCTGG...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGTTGGACTGGCCCCTCTaGGGCAGCTTACTAGATAAG +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQLDWPL*GSLLDK
Trigger: CTTATCTAGTAAGCTGCCTCAGAGGGGCCAGTCCAA...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCATTGGACTGGCCCCTCTaGGGCAGCTTACTAGATAAG +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTALDWPL*GSLLDK
Trigger: CTTATCTAGTAAGCTGCCTCAGAGGGGCCAGTCCAA...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCGGGCTGCCTCCTTTTTaGTGTCTTCAGGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSGLPPF*CLQAEI
Trigger: GATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCC...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAGGGCTGCCTCCTTTTTaGTGTCTTCAGGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGGLPPF*CLQAEI
Trigger: GATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCC...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGGCAGATGGAAGTTTCTaGGGCACTGATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQADGSF*GTDPSG
Trigger: GCCAGAAGGATCAGTGCCTCAGAAACTTCCATCTGC...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTC +
Preference number: 4 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYARDVP*VFRYVV
Trigger: GACTACATACCTGAAAACTCAGGGGACATCCCTTGC...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTC +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWARDVP*VFRYVV
Trigger: GACTACATACCTGAAAACTCAGGGGACATCCCTTGC...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQLLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGCTTTCCTCCCCCACATaGCCATGTTGGATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLLSSPT*PCWMFC
Trigger: ACAGAACATCCAACATGGGCATGTGGGGGAGGAAAG...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGCTTTCCTCCCCCACATaGCCATGTTGGATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWLSSPT*PCWMFC
Trigger: ACAGAACATCCAACATGGGCATGTGGGGGAGGAAAG...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: ERSFIPYCVGQQLLRRCYQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...GTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGCCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKPQGGR*CCSKGC
Trigger: ACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGG...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLTAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCAGTTCTTTGCATCGCTaGGCCAAGACGTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSSSLHR*AKTFLE
Trigger: CTCAAGGAACGTCTTGGCCCAGCGATGCAAAGAACT...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000347025.6
CDS-3UTR CCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGTTCTTTGCATCGCTaGGCCAAGACGTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSSSLHR*AKTFLE
Trigger: CTCAAGGAACGTCTTGGCCCAGCGATGCAAAGAACT...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000347025.6
CDS-3UTR CCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGGAAGACGGTTTCCTCTaGGTTACCCTCCTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLEDGFL*VTLLVL
Trigger: CAAGACTAGGAGGGTAACCCAGAGGAAACCGTCTTC...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTCATGGAAGCCTCTGTTaGACTGGCCCCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGHGSLC*TGPSEA
Trigger: TGCCTCAGAGGGGCCAGTCCAACAGAGGCTTCCATG...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGATCAGGCAGAAATCCATaGAAGCCTCTGTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGSGRNP*KPLLDW
Trigger: CCAGTCCAACAGAGGCTTCCATGGATTTCTGCCTGA...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp TGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCCTGCCCACATGCCCATGTTaGATGTTCTGTGTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: CRNVPQGGRCCCSKGCPLPTCPC*MFCVGR
Trigger: TCGCCCAACACAGAACATCCAACATGGGCATGTGGG...CAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGACTTGCGGTGGTAGATaGCTTGACTACAACACGGGC +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQTCGGR*LDYNTG
Trigger: GCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGT...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGCAGGTATGTAGTCTGTaGCTGCAGCAGGTGAACACT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWQVCSL*LQQVNT
Trigger: AGTGTTCACCTGCTGCAGCCACAGACTACATACCTG...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTAAATGTTCCTCAGGGTaGAAGGTGCTGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIKCSSG*KVLLQQ
Trigger: TTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGTGGAAGAATCCTTGGTaGGAGGAGAGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWWKNPW*EERRRK
Trigger: CTTTCTCCTCCTCTCCTCCCACCAAGGATTCTTCCA...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTGGAAGAATCCTTGGTaGGAGGAGAGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSWKNPW*EERRRK
Trigger: CTTTCTCCTCCTCTCCTCCCACCAAGGATTCTTCCA...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAAGGTGGAAGAATCCTTaGTGGGAGGAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTARWKNP*WEERRR
Trigger: TCTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCT...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGGGTGGCTTTGCAAATaGGGCTTCCACAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKGWLCK*GFHKLP
Trigger: TGGCAGCTTGTGGAAGCCTCATTTGCAAAGCCACCC...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR TCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCGCAGATGGAAGTTTCTaGGGCACTGATCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLADGSF*GTDPSG
Trigger: GCCAGAAGGATCAGTGCCTCAGAAACTTCCATCTGC...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCCTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLLLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTACAGTCTTCATTCGGTaGTGTCTCTCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPITVFIR*CLSLLS
Trigger: AGAGAGGAGAGAGAGACAGCACCGAATGAAGACTGT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR GCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCCCTAGAAGCCCGGGCTaGCTCCTTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLPRSPG*LLFDVF
Trigger: GAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGG...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCCTAGAAGCCCGGGCTaGCTCCTTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVPRSPG*LLFDVF
Trigger: GAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGGGCATATTTCTGTATaGACTTGCGGTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIGHISV*TCGGRW
Trigger: CCATCTACCACCGCAAGTGCATACAGAAATATGCCC...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCCCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLPQGGR*CCSKGC
Trigger: ACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGG...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCTTCCAAGGTGTTCTCACAGTCCCAGAGTaGTCCCTCCCCAAACCCGAT +
Preference number: 4 (lower is better)
Translates to: GRFWPISPRKARILFQGVLTVPE*SLPKPD
Trigger: ATCGGGTTTGGGGAGGGAGCACTCTGGGACTGTGAG...AACACCTTGGAAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR GCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQTAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCCCACATGCCCATGTTaGATGTTCTGTGTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVPTCPC*MFCVGR
Trigger: TCGCCCAACACAGAACATCCAACATGGGCATGTGGG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGCTACAACACGGGCTCTaGATGTTCTCAACACTCTGT +
Preference number: 4 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGLQHGL*MFSTLC
Trigger: ACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTCTACAACACGGGCTCTaGATGTTCTCAACACTCTGT +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPILQHGL*MFSTLC
Trigger: ACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCACTTGCGGTGGTAGATaGCTTGACTACAACACGGGC +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLTCGGR*LDYNTG
Trigger: GCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATGTTCATACAGACAGATaGGGGCATCACAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYVHTDR*GHHSAD
Trigger: ATCAGCACTGTGATGCCCCCATCTGTCTGTATGAAC...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000461861.5
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGTTCATACAGACAGATaGGGGCATCACAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWVHTDR*GHHSAD
Trigger: ATCAGCACTGTGATGCCCCCATCTGTCTGTATGAAC...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000461861.5
CDS-3UTR CCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTGAGGAGCAGTCCCTGTaGGTTCCGTGGGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPEEQSL*VPWDPH
Trigger: ATGCGGATCCCACGGAACCCACAGGGACTGCTCCTC...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACCCTCCCCAAACCCGATaGAGGAGCGCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: ERSFIPYCVGQQLLRRCYPPQTR*RSAASY
Trigger: GTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG...GTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGGTGGAAGAATCCTTaGTGGGAGGAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLRWKNP*WEERRR
Trigger: TCTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCCCGCCGCCGCAAGAATaGTTTATCTGTAAAATACGT +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSPPPQE*FICKIR
Trigger: ACGTATTTTACAGATAAATCATTCTTGCGGCGGCGG...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR TCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGTTGGACTGGCCCCTCTaGGGCAGCTTACTAGATAAG +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKLDWPL*GSLLDK
Trigger: CTTATCTAGTAAGCTGCCTCAGAGGGGCCAGTCCAA...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGGGGCTGCCTCCTTTTTaGTGTCTTCAGGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVGLPPF*CLQAEI
Trigger: GATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCC...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAAAGTTTCTGAGGCACTaGTCCTTCTGGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGKFLRH*SFWQLI
Trigger: TATCAACTGCCAGAAGGATCAGTGCCTCAGAAACTT...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCAAGTTTCTGAGGCACTaGTCCTTCTGGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSKFLRH*SFWQLI
Trigger: TATCAACTGCCAGAAGGATCAGTGCCTCAGAAACTT...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATAAGTTTCTGAGGCACTaGTCCTTCTGGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYKFLRH*SFWQLI
Trigger: TATCAACTGCCAGAAGGATCAGTGCCTCAGAAACTT...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp TTTCAGGTATGTAGTCTGTGGCTGCAGCAGGTGAACACTCCTCACACTCCCATTTGTGGCTGCAGCAGGTaGACACTCCTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: FQVCSLWLQQVNTPHTPICGCSR*TLLTLP
Trigger: TGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACA...AATGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACAGACTACATACCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR TCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTC +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLARDVP*VFRYVV
Trigger: GACTACATACCTGAAAACTCAGGGGACATCCCTTGC...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGACAGTCTTCATTCGGTaGTGTCTCTCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQTVFIR*CLSLLS
Trigger: AGAGAGGAGAGAGAGACAGCACCGAATGAAGACTGT...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR GCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCCTTTCCTCCCCCACATaGCCATGTTGGATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLLSSPT*PCWMFC
Trigger: ACAGAACATCCAACATGGGCATGTGGGGGAGGAAAG...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCTTTCCTCCCCCACATaGCCATGTTGGATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVLSSPT*PCWMFC
Trigger: ACAGAACATCCAACATGGGCATGTGGGGGAGGAAAG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCCTTCACAACATAAGATaGAGCTTTCCTCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSLHNIR*SFPPPH
Trigger: ATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAG...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTCTTCACAACATAAGATaGAGCTTTCCTCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPILHNIR*SFPPPH
Trigger: ATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAG...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACTTCACAACATAAGATaGAGCTTTCCTCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGLHNIR*SFPPPH
Trigger: ATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAG...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGATTTCTGTATGCACTTaGGGTGGTAGATGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGISVCT*GGRWLD
Trigger: GTCAAGCCATCTACCACCGCAAGTGCATACAGAAAT...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTATTTCTGTATGCACTTaGGGTGGTAGATGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIISVCT*GGRWLD
Trigger: GTCAAGCCATCTACCACCGCAAGTGCATACAGAAAT...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGGGGCATATTTCTGTATaGACTTGCGGTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQGHISV*TCGGRW
Trigger: CCATCTACCACCGCAAGTGCATACAGAAATATGCCC...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGCCTCAAAGCTGTCTCTaGCTTGTTCATACAGACAGA +
Preference number: 4 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGPQSCL*LVHTDR
Trigger: TCTGTCTGTATGAACAAGGCAGAGACAGCTTTGAGG...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000461861.5
CDS-3UTR GCA 90 bp CGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RSFIPYCVGQQLLRRCYLRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...CAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp TTTCAGGTATGTAGTCTGTGGCTGCAGCAGGTGAACACTCCTCACACTCCCATTAGGAGTAGCTCCTCCTaGCACGAGAGGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FQVCSLWLQQVNTPHTPIRSSSS*HERTLA
Trigger: AGCCAGAGTCCTCTCGTGGCAGGAGGAGCTACTCCT...AATGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACAGACTACATACCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR GCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLTAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGCCCACATGCCCATGTTaGATGTTCTGTGTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRPTCPC*MFCVGR
Trigger: TCGCCCAACACAGAACATCCAACATGGGCATGTGGG...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCCTGCTACAACACGGGCTCTaGATGTTCTCAACACTCTGT +
Preference number: 4 (lower is better)
Translates to: CRNVPQGGRCCCSKGCPLLQHGL*MFSTLC
Trigger: ACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG...CAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGACTTGCGGTGGTAGATaGCTTGACTACAACACGGGC +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRTCGGR*LDYNTG
Trigger: GCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGT...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCCAGGTATGTAGTCTGTaGCTGCAGCAGGTGAACACT +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLQVCSL*LQQVNT
Trigger: AGTGTTCACCTGCTGCAGCCACAGACTACATACCTG...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPISYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTAGGTGGAAGAATCCTTaGTGGGAGGAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGRWKNP*WEERRR
Trigger: TCTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCT...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCGCACCACCTCCTGTCTaGAATATGAATTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSAPPPV*NMNSHS
Trigger: AGAATGGGAATTCATATTCCAGACAGGAGGTGGTGC...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CTGGCTTTTCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATCCATGGAGCCTCTGTTaGACTGGCCCCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LAFLIRKVLANQSKKGPDPWSLC*TGPSEA
Trigger: TGCCTCAGAGGGGCCAGTCCAACAGAGGCTCCATGG...ATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGAAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615126.1
3UTR CAA 72 bp CCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTT +
Preference number: 4 (lower is better)
Translates to: PKPDGGAQLHTL*CGTAATQKVLL
Trigger: AAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR TCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGGGCTGCCTCCTTTTTaGTGTCTTCAGGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKGLPPF*CLQAEI
Trigger: GATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCC...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCGAAGAAATGCTTTGCTaGTGTGTGGGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSEEMLC*CVGIFL
Trigger: CAGAAATATGCCCACACATCAGCAAAGCATTTCTTC...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAGAAGAAATGCTTTGCTaGTGTGTGGGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGEEMLC*CVGIFL
Trigger: CAGAAATATGCCCACACATCAGCAAAGCATTTCTTC...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCACAGTCTTCATTCGGTaGTGTCTCTCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLTVFIR*CLSLLS
Trigger: AGAGAGGAGAGAGAGACAGCACCGAATGAAGACTGT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR GCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAATTTCTGTATGCACTTaGGGTGGTAGATGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAISVCT*GGRWLD
Trigger: GTCAAGCCATCTACCACCGCAAGTGCATACAGAAAT...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGGGGCATATTTCTGTATaGACTTGCGGTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVGHISV*TCGGRW
Trigger: CCATCTACCACCGCAAGTGCATACAGAAATATGCCC...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLGHLKK*FADVWA
Trigger: TGCCCACACATCAGCAAAGCATTTCTTCAAATGTCC...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGGHLKK*FADVWA
Trigger: TGCCCACACATCAGCAAAGCATTTCTTCAAATGTCC...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIGHLKK*FADVWA
Trigger: TGCCCACACATCAGCAAAGCATTTCTTCAAATGTCC...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTCAGGGTGGAAGGTGCTaGTGCAGCAAGGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: ASYPIVWDSSYSEGVTWIQGGRC*CSKGCP
Trigger: GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTG...AATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCACTGAGACTTCTCTTTaGTTGGCTCATAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSTETSL*LAHSLT
Trigger: AGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGT...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGACTGAGACTTCTCTTTaGTTGGCTCATAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWTETSL*LAHSLT
Trigger: AGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGT...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCCCCACATGCCCATGTTaGATGTTCTGTGTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLPTCPC*MFCVGR
Trigger: TCGCCCAACACAGAACATCCAACATGGGCATGTGGG...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATGAGGAGCAGTCCCTGTaGGTTCCGTGGGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: SFIPYCVGQQLLRRCYLDEEQSL*VPWDPH
Trigger: ATGCGGATCCCACGGAACCCACAGGGACTGCTCCTC...ATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGAAATGTTCCTCAGGGTaGAAGGTGCTGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKKCSSG*KVLLQQ
Trigger: TTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTT...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQSYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCAGGTGGAAGAATCCTTaGTGGGAGGAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLRWKNP*WEERRR
Trigger: TCTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCT...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGGCACCACCTCCTGTCTaGAATATGAATTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQAPPPV*NMNSHS
Trigger: AGAATGGGAATTCATATTCCAGACAGGAGGTGGTGC...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACGGGCTGCCTCCTTTTTaGTGTCTTCAGGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: ERSFIPYCVGQQLLRRCYGLPPF*CLQAEI
Trigger: GATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCC...GTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR TCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGGAAGAAATGCTTTGCTaGTGTGTGGGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQEEMLC*CVGIFL
Trigger: CAGAAATATGCCCACACATCAGCAAAGCATTTCTTC...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPLLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTGGGCATATTTCTGTATaGACTTGCGGTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: EERSFIPYCVGQQLLRRCGHISV*TCGGRW
Trigger: CCATCTACCACCGCAAGTGCATACAGAAATATGCCC...ACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAGHLKK*FADVWA
Trigger: TGCCCACACATCAGCAAAGCATTTCTTCAAATGTCC...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CTGGCTTTTCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCACTGCTGGCCCTaGTTCCTTGTCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LAFLIRKVLANQSKKGPDSHCWP*FLVSQS
Trigger: GGACTGTGAGACAAGGAAGCAGGGCCAGCAGTGAGA...ATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGAAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR GCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLTAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCTCAGGCAGAAATCCATaGAAGCCTCTGTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLSGRNP*KPLLDW
Trigger: CCAGTCCAACAGAGGCTTCCATGGATTTCTGCCTGA...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTTGGATGTTCTGTGTTaGGCGATGTTTGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLLDVLC*AMFVTK
Trigger: TTTTGTGACAAACATCGCCCAACACAGAACATCCAA...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTTGGATGTTCTGTGTTaGGCGATGTTTGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPILDVLC*AMFVTK
Trigger: TTTTGTGACAAACATCGCCCAACACAGAACATCCAA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTTGGATGTTCTGTGTTaGGCGATGTTTGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSLDVLC*AMFVTK
Trigger: TTTTGTGACAAACATCGCCCAACACAGAACATCCAA...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGCTACAACACGGGCTCTaGATGTTCTCAACACTCTGT +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKLQHGL*MFSTLC
Trigger: ACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTCTACAACACGGGCTCTaGATGTTCTCAACACTCTGT +
Preference number: 4 (lower is better)
Translates to: EERSFIPYCVGQQLLRRCLQHGL*MFSTLC
Trigger: ACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG...ACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp GAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACCAGGTATGTAGTCTGTaGCTGCAGCAGGTGAACACT +
Preference number: 4 (lower is better)
Translates to: ERSFIPYCVGQQLLRRCYQVCSL*LQQVNT
Trigger: AGTGTTCACCTGCTGCAGCCACAGACTACATACCTG...GTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCAAATGTTCCTCAGGGTaGAAGGTGCTGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLKCSSG*KVLLQQ
Trigger: TTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTT...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTTTCCTTGTTGGCATCTaGACTGCTCCCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPFLVGI*TAPSSC
Trigger: GCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAA...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCAAAACAAGATTAAGGTaGAAGAATCCTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSKTRLR*KNPWWE
Trigger: CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTT...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
3UTR CAA 72 bp AAGCAGAGGCACTCTTGTAGCCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTCCCTCCTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: KQRHSCSHKRIS*LASGLLPPHAP
Trigger: TGGAGCATGAGGAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCTCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGATCTTCAAAACATCTaGGGGGTGGCTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKDLQNI*GVALQM
Trigger: CATTTGCAAAGCCACCCCTCAGATGTTTTGAAGATC...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR TCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAATTCTCAGCATTTCTTaGGGAAACTCTTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGILSIS*GNSFRL
Trigger: CAATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAAT...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
CDS-3UTR TCA 90 bp CAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGACTCCTCATGCTCCACTaGGACTTCTCTTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLHTLLCGTAATQKVLLGLLMLH*DFSLLG
Trigger: GCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAG...TCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR GCA 90 bp CTGGCTTTTCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATCCTAGAAGCCCGGGCTaGCTCCTTTTTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LAFLIRKVLANQSKKGPDPRSPG*LLFDVF
Trigger: GAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGG...ATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGAAAAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR GCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTCTTCACAACATAAGATaGAGCTTTCCTCCCCCACAT +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGLHNIR*SFPPPH
Trigger: ATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAG...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGATTTCTGTATGCACTTaGGGTGGTAGATGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKISVCT*GGRWLD
Trigger: GTCAAGCCATCTACCACCGCAAGTGCATACAGAAAT...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTACTGCTCCCTCCTCATaGTCCACTGAGACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPTAPSS*STETSL
Trigger: AAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGT...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTTCAGGCAGAAATCCATaGAAGCCTCTGTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPSGRNP*KPLLDW
Trigger: CCAGTCCAACAGAGGCTTCCATGGATTTCTGCCTGA...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTTCTCAACACTCTGTTaGGATAAGTCTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIFSTLC*DKSSQH
Trigger: ATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGTTCTCAACACTCTGTTaGGATAAGTCTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWFSTLC*DKSSQH
Trigger: ATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAA...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGAACTTGCGGTGGTAGATaGCTTGACTACAACACGGGC +
Preference number: 4 (lower is better)
Translates to: QLHTLLCGTAATQKVLLGTCGGR*LDYNTG
Trigger: GCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGT...TCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTAAATGTTCCTCAGGGTaGAAGGTGCTGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPKCSSG*KVLLQQ
Trigger: TTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTT...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGTTGTCTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: CCLCRNVPQGGRCCCSKGSYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...TCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTTGGAAGAATCCTTGGTaGGAGGAGAGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPWKNPW*EERRRK
Trigger: CTTTCTCCTCCTCTCCTCCCACCAAGGATTCTTCCA...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGAAAACAAGATTAAGGTaGAAGAATCCTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQKTRLR*KNPWWE
Trigger: CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTT...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTGAAGAAATGCTTTGCTaGTGTGTGGGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: EERSFIPYCVGQQLLRRCEEMLC*CVGIFL
Trigger: CAGAAATATGCCCACACATCAGCAAAGCATTTCTTC...ACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR TCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAATTCTCAGCATTTCTTaGGGAAACTCTTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAILSIS*GNSFRL
Trigger: CAATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAAT...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
CDS-3UTR TCA 90 bp CTGGCTTTTCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTC +
Preference number: 4 (lower is better)
Translates to: LAFLIRKVLANQSKKGPDARDVP*VFRYVV
Trigger: GACTACATACCTGAAAACTCAGGGGACATCCCTTGC...ATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGAAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR TCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAACAACAAACATGGGTaGAGTAAGAAGAGGCATATG +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLNNKHG*SKKRHM
Trigger: CATATGCCTCTTCTTACTTCACCCATGTTTGTTGTT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGAACAACAAACATGGGTaGAGTAAGAAGAGGCATATG +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVNNKHG*SKKRHM
Trigger: CATATGCCTCTTCTTACTTCACCCATGTTTGTTGTT...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp GAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACATTTCTGTATGCACTTaGGGTGGTAGATGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: ERSFIPYCVGQQLLRRCYISVCT*GGRWLD
Trigger: GTCAAGCCATCTACCACCGCAAGTGCATACAGAAAT...GTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp TCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTTCCTCAGGGTGGAAGGTaGTGCTGCAGCAAGGGATGT +
Preference number: 4 (lower is better)
Translates to: SYPIVWDSSYSEGVTWIFPQGGR*CCSKGC
Trigger: ACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGG...AAAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGACTGAGACTTCTCTTTaGTTGGCTCATAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRTETSL*LAHSLT
Trigger: AGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGT...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGTCGATTGTTACACTGTaGACATTTGAAGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWSIVTL*TFEEML
Trigger: AAGCATTTCTTCAAATGTCCACAGTGTAACAATCGA...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGATCGATTGTTACACTGTaGACATTTGAAGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: APSPNPMEERSFIPYCVGSIVTL*TFEEML
Trigger: AAGCATTTCTTCAAATGTCCACAGTGTAACAATCGA...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGGAGGAGCAGTCCCTGTaGGTTCCGTGGGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEEEQSL*VPWDPH
Trigger: ATGCGGATCCCACGGAACCCACAGGGACTGCTCCTC...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCTTCCAAATGTTCCTCAGGGTaGAAGGTGCTGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SNKEGSGQSVQERPGFSSKCSSG*KVLLQQ
Trigger: TTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTT...GGAAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCTCATACCCTATTGTGTaGGACAGCAGCTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLSYPIV*DSSYSE
Trigger: TTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATGGAAGAATCCTTGGTaGGAGGAGAGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLHTLLCGTAATQKVLLGWKNPW*EERRRK
Trigger: CTTTCTCCTCCTCTCCTCCCACCAAGGATTCTTCCA...TCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAAAACAAGATTAAGGTaGAAGAATCCTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLKTRLR*KNPWWE
Trigger: CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCTCTCTCTCCTCTCTTaGATTCTTCTATACTATTGT +
Preference number: 4 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVLSLLS*ILLYYC
Trigger: ACAATAGTATAGAAGAATTCAAGAGAGGAGAGAGAG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR TCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCGAAGAAATGCTTTGCTaGTGTGTGGGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLEEMLC*CVGIFL
Trigger: CAGAAATATGCCCACACATCAGCAAAGCATTTCTTC...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGTGTGGCTGCAGCAGGTaGACACTCCTCACACTCCCA +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWECGCSR*TLLTLP
Trigger: TGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACA...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGAACAACAAACATGGGTaGAGTAAGAAGAGGCATATG +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKNNKHG*SKKRHM
Trigger: CATATGCCTCTTCTTACTTCACCCATGTTTGTTGTT...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGAACAACAAACATGGGTaGAGTAAGAAGAGGCATATG +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRNNKHG*SKKRHM
Trigger: CATATGCCTCTTCTTACTTCACCCATGTTTGTTGTT...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp TCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCTTCCGGGCATATTTCTGTATaGACTTGCGGTGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SNKEGSGQSVQERPGFSSGHISV*TCGGRW
Trigger: CCATCTACCACCGCAAGTGCATACAGAAATATGCCC...GGAAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR GCA 90 bp TTTGCAGCTGTTAGTGATTCTGACACCCTTGGACCTCCAGGAGTAGCTCCTCCTGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FAAVSDSDTLGPPGVAPPGHLKK*FADVWA
Trigger: TGCCCACACATCAGCAAAGCATTTCTTCAAATGTCC...AGGAGGAGCTACTCCTGGAGGTCCAAGGGTGTCAGAATCACTAACAGCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCATGGAAGCCTCTGTTaGACTGGCCCCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEHGSLC*TGPSEA
Trigger: TGCCTCAGAGGGGCCAGTCCAACAGAGGCTTCCATG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGTCGATTGTTACACTGTaGACATTTGAAGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQSIVTL*TFEEML
Trigger: AAGCATTTCTTCAAATGTCCACAGTGTAACAATCGA...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCATCGATTGTTACACTGTaGACATTTGAAGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTASIVTL*TFEEML
Trigger: AAGCATTTCTTCAAATGTCCACAGTGTAACAATCGA...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTGAAGAAATGCTTTGCTaGTGTGTGGGCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPEEMLC*CVGIFL
Trigger: CAGAAATATGCCCACACATCAGCAAAGCATTTCTTC...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGATTCTCAGCATTTCTTaGGGAAACTCTTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKILSIS*GNSFRL
Trigger: CAATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAAT...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
CDS-3UTR GCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPGHLKK*FADVWA
Trigger: TGCCCACACATCAGCAAAGCATTTCTTCAAATGTCC...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp CGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGACTGAGACTTCTCTTTaGTTGGCTCATAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: RSFIPYCVGQQLLRRCYLTETSL*LAHSLT
Trigger: AGTGAGACTATGAGCCAAGCAAAGAGAAGTCTCAGT...CAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTTCTCAACACTCTGTTaGGATAAGTCTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRFSTLC*DKSSQH
Trigger: ATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAA...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTTTCTCAACACTCTGTTaGGATAAGTCTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGFSTLC*DKSSQH
Trigger: ATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAA...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GTTGTCTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATTTCTCAACACTCTGTTaGGATAAGTCTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: VVSAEMFLRVEGAAAARDFSTLC*DKSSQH
Trigger: ATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAA...ATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCAAAACAAGATTAAGGTaGAAGAATCCTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLKTRLR*KNPWWE
Trigger: CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTT...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCATTCTCAGCATTTCTTaGGGAAACTCTTTCGATTGT +
Preference number: 4 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLILSIS*GNSFDC
Trigger: ACAATCGAAAGAGTTTCCTCAAGAAATGCTGAGAAT...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCCCACATGCCCATGTTaGATGTTCTGTGTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEPTCPC*MFCVGR
Trigger: TCGCCCAACACAGAACATCCAACATGGGCATGTGGG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGTCGATTGTTACACTGTaGACATTTGAAGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKSIVTL*TFEEML
Trigger: AAGCATTTCTTCAAATGTCCACAGTGTAACAATCGA...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp GCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTGCACCACCTCCTGTCTaGAATATGAATTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: ASYPIVWDSSYSEGVTWIAPPPV*NMNSHS
Trigger: AGAATGGGAATTCATATTCCAGACAGGAGGTGGTGC...AATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR TCA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTATTCTCAGCATTTCTTaGGGAAACTCTTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: RHSCSHKRISLLASGLLPILSIS*GNSFRL
Trigger: CAATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAAT...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTC +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEARDVP*VFRYVV
Trigger: GACTACATACCTGAAAACTCAGGGGACATCCCTTGC...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGTCAGGCAGAAATCCATaGAAGCCTCTGTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWESGRNP*KPLLDW
Trigger: CCAGTCCAACAGAGGCTTCCATGGATTTCTGCCTGA...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CCA 90 bp CAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTGGATGTTCTGTGTTaGGCGATGTTTGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: QLHTLLCGTAATQKVLLGLDVLC*AMFVTK
Trigger: TTTTGTGACAAACATCGCCCAACACAGAACATCCAA...TCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCAGGTATGTAGTCTGTaGCTGCAGCAGGTGAACACT +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEQVCSL*LQQVNT
Trigger: AGTGTTCACCTGCTGCAGCCACAGACTACATACCTG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTT +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEARDVP*VFRYVV
Trigger: AACTACATACCTGAAAACTCAGGGGACATCCCTTGC...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461861.5
CDS-3UTR GCA 90 bp TCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTTATTTCTGTATGCACTTaGGGTGGTAGATGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SYPIVWDSSYSEGVTWIFISVCT*GGRWLD
Trigger: GTCAAGCCATCTACCACCGCAAGTGCATACAGAAAT...AAAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCTACAACACGGGCTCTaGATGTTCTCAACACTCTGT +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWELQHGL*MFSTLC
Trigger: ACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CCA 90 bp TTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTAGACTTCTCTTTGCTTaGCTCATAGTCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: FIPYCVGQQLLRRCYLDFRLLFA*LIVSLL
Trigger: CAGCAGTGAGACTATGAGCCAAGCAAAGAGAAGTCT...AAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGAAGTTTCTGAGGCACTaGTCCTTCTGGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEKFLRH*SFWQLI
Trigger: TATCAACTGCCAGAAGGATCAGTGCCTCAGAAACTT...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR GCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCCTCAAAGCTGTCTCTaGCTTGTTCATACAGACAGA +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEPQSCL*LVHTDR
Trigger: TCTGTCTGTATGAACAAGGCAGAGACAGCTTTGAGG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000461861.5
CDS-3UTR TCA 90 bp TTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTAACAACAAACATGGGTaGAGTAAGAAGAGGCATATG +
Preference number: 4 (lower is better)
Translates to: FIPYCVGQQLLRRCYLDFNNKHG*SKKRHM
Trigger: CATATGCCTCTTCTTACTTCACCCATGTTTGTTGTT...AAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCTCTCTCTCCTCTCTTaGATTCTTCTATACTATTGT +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWELSLLS*ILLYYC
Trigger: ACAATAGTATAGAAGAATTCAAGAGAGGAGAGAGAG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR TCA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGATTCTCAGCATTTCTTaGGGAAACTCTTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEILSIS*GNSFRL
Trigger: CAATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAAT...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS GCA 90 bp CGCGGATGCCAGACCAGGCTCATGTCGCGCCTGCCGGGCGGCCAGTaGAGGGCCGGGCCGAGGTCGCCTCCGCCGCTCCTCCTCGCGGTA +
Preference number: 5 (lower is better)
Translates to: RGCQTRLMSRLPGGQ*RAGPRSPPPLLLAV
Trigger: TACCGCGAGGAGGAGCGGCGGAGGCGACCTCGGCCCGGCCCTGCACTGGCCGCCCGGCAGGCGCGACATGAGCCTGGTCTGGCATCCGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS GCA 90 bp CTTAAGGAGCATCCCGCGGATGCCAGACCAGGCTCATGTCGCGCCTaGCGGGCGGCCAGTGCAGGGCCGGGCCGAGGTCGCCTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LKEHPADARPGSCRA*RAASAGPGRGRLRR
Trigger: GCGGCGGAGGCGACCTCGGCCCGGCCCTGCACTGGCCGCCCGGCAGGCGCGACATGAGCCTGGTCTGGCATCCGCGGGATGCTCCTTAAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATCCCCACATGCCCATGTaGGATGTTCTGTGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYPHMPM*DVLCWA
Trigger: CGCCCAACACAGAACATCCAACATGGGCATGTGGGG...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGCCCCACATGCCCATGTaGGATGTTCTGTGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGPHMPM*DVLCWA
Trigger: CGCCCAACACAGAACATCCAACATGGGCATGTGGGG...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCCCCCACATGCCCATGTaGGATGTTCTGTGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSPHMPM*DVLCWA
Trigger: CGCCCAACACAGAACATCCAACATGGGCATGTGGGG...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLAVVDG*TTTRAL
Trigger: CAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGC...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYAVVDG*TTTRAL
Trigger: CAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGC...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCCCCACATGCCCATGTaGGATGTTCTGTGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQPHMPM*DVLCWA
Trigger: CGCCCAACACAGAACATCCAACATGGGCATGTGGGG...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LCRNVPQGGRCCCSKGCPAVVDG*TTTRAL
Trigger: CAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGC...GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATAAGGTGGAAGAATCCTaGGTGGGAGGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYKVEES*VGGEEE
Trigger: CTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCTT...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAAGGTGGAAGAATCCTaGGTGGGAGGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGKVEES*VGGEEE
Trigger: CTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCTT...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAAAGGTGGAAGAATCCTaGGTGGGAGGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: APSPNPMEERSFIPYCVGKVEES*VGGEEE
Trigger: CTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCTT...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGGGCCAAGACGTTCCTaGAGTAGGATTCTGTGCACA +
Preference number: 5 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWGPRRS*SRILCT
Trigger: TGTGCACAGAATCCTACTCAAGGAACGTCTTGGCCC...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS-3UTR CAA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGAAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: APSPNPMEERSFIPYCVGKATPF*ATRQME
Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLAVVDG*TTTRAL
Trigger: CAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGC...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS TCA 90 bp CAAGACGTCACGATCTTCAAAACATCTGAGGGGTGGCTTTGCAAATaGGGCTTCCACAAGCTGCCAGGCAGTGGCTTCCTAACCCGGCGG +
Preference number: 5 (lower is better)
Translates to: QDVTIFKTSEGWLCK*GFHKLPGSGFLTRR
Trigger: CCGCCGGGTTAGGAAGCCACTGCCTGGCAGCTTGTGGAAGCCTCATTTGCAAAGCCACCCCTCAGATGTTTTGAAGATCGTGACGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000473145.5
ENST00000482327.5
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYRAASF*MSSGRN
Trigger: ATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCG...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSRAASF*MSSGRN
Trigger: ATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCG...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAKATPF*ATRQME
Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: LCRNVPQGGRCCCSKGCPKATPF*ATRQME
Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...GGGACATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CAA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRAVVDG*TTTRAL
Trigger: CAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGC...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: APSPNPMEERSFIPYCVGQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAAGGTGGAAGAATCCTaGGTGGGAGGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLKVEES*VGGEEE
Trigger: CTCCTCCTCTCCTCCCACCAAGGATTCTTCCACCTT...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCACGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTARAASF*MSSGRN
Trigger: ATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCG...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVKATPF*ATRQME
Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TTTGCAGCTGTTAGTGATTCTGACACCCTTGGACCTCCAGGAGTAGCTCCTCCTCCCCACATGCCCATGTaGGATGTTCTGTGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: FAAVSDSDTLGPPGVAPPPHMPM*DVLCWA
Trigger: CGCCCAACACAGAACATCCAACATGGGCATGTGGGG...AGGAGGAGCTACTCCTGGAGGTCCAAGGGTGTCAGAATCACTAACAGCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CAA 90 bp TTTGCAGCTGTTAGTGATTCTGACACCCTTGGACCTCCAGGAGTAGCTCCTCCTGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: FAAVSDSDTLGPPGVAPPAVVDG*TTTRAL
Trigger: CAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGC...AGGAGGAGCTACTCCTGGAGGTCCAAGGGTGTCAGAATCACTAACAGCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: PRVLPPQTRWRSAASYPIHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCGTTACCCTCCTAGTCTaGGCAGATTTTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSVTLLV*ADFLNL
Trigger: GAGATTGAGAAAATCTGCCAAGACTAGGAGGGTAAC...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATGTTGGATGTTCTGTGTaGGGCGATGTTTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYVGCSV*GDVCHK
Trigger: TTTGTGACAAACATCGCCCAACACAGAACATCCAAC...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGGTTGGATGTTCTGTGTaGGGCGATGTTTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLVGCSV*GDVCHK
Trigger: TTTGTGACAAACATCGCCCAACACAGAACATCCAAC...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGAAAGCTGTCTCTGCCTaGTTCATACAGACAGATGGG +
Preference number: 5 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQKAVSA*FIQTDG
Trigger: CCCATCTGTCTGTATGAACAAGGCAGAGACAGCTTT...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000461861.5
CDS-3UTR CAA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTTCTCTTCCAAGGTGTaGTCTCTGCAGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSFSSKV*SLQKCS
Trigger: GGAACATTTCTGCAGAGACAACACCTTGGAAGAGAA...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTTCTCTTCCAAGGTGTaGTCTCTGCAGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: PQTRWRSAASYPIVWDSSFSSKV*SLQKCS
Trigger: GGAACATTTCTGCAGAGACAACACCTTGGAAGAGAA...GCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS GCA 90 bp TCTAGCCAGAAGCCTTCCCCTACCCTTCATCCTCAAAGCTGTCTCTaGCTTGTTCATACAGACAGATGGGGGCATCACAGTGCTGATAGC +
Preference number: 5 (lower is better)
Translates to: SSQKPSPTLHPQSCL*LVHTDRWGHHSADS
Trigger: GCTATCAGCACTGTGATGCCCCCATCTGTCTGTATGAACAAGGCAGAGACAGCTTTGAGGATGAAGGGTAGGGGAAGGCTTCTGGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CCA 90 bp TTCTTACTGTTAGATCTAAGAGAGGAGCAGTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACACAGAATGAGGCACCACCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: FLLLDLREEQSLWVP*DPHVAHRMRHHLPS
Trigger: TGAAGGGAGGTGGTGCCTCATTCTGTGTGCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATCTAACAGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS CCA 90 bp TTCTTACTGTTAGATCTAAGAGAGGAGCAGTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACACAGAATGAGGCACCACCTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: FLLLDLREEQSLWVP*DPHVAHRMRHHLLS
Trigger: AGACAGGAGGTGGTGCCTCATTCTGTGTGCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATCTAACAGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347025.6
ENST00000614886.4
ENST00000615126.1
CDS CCA 90 bp TTCTTACTGTTAGATCTAAGAGAGGAGCAGTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACACAGAATGAGGCACCACCTCCTAGAG +
Preference number: 5 (lower is better)
Translates to: FLLLDLREEQSLWVP*DPHVAHRMRHHLLE
Trigger: CTCTAGGAGGTGGTGCCTCATTCTGTGTGCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATCTAACAGTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CCA 90 bp CTGGCCAAGTGGCCTGGCAGTGGGAGAGGGTTGAAGCAGGATGAATaGAACATGCATGCAGGTTCCTTAGTTCCACTCTGGAATCCAATA +
Preference number: 5 (lower is better)
Translates to: LAKWPGSGRGLKQDE*NMHAGSLVPLWNPI
Trigger: TATTGGATTCCAGAGTGGAACTAAGGAACCTGCATGCATGTTCCATTCATCCTGCTTCAACCCTCTCCCACTGCCAGGCCACTTGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498509.2
CDS-3UTR CAA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGRAASF*MSSGRN
Trigger: ATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCG...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCAAGGCAACCCCTTTCTaGGCCACAAGGCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: GTLVAINAFPCWHLDCSLKATPF*ATRQME
Trigger: TTCCATCTGCCTTGTGGCCAAGAAAGGGGTTGCCTT...GAGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGTTGGATGTTCTGTGTaGGGCGATGTTTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAVGCSV*GDVCHK
Trigger: TTTGTGACAAACATCGCCCAACACAGAACATCCAAC...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp AACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: NPMEERSFIPYCVGQQLLHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...GAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS CCA 90 bp ACCTTGCAGGGGAGACGTGTTCACGTGCACACAAGTGAGTCGGGCTaGTCAAGAATGAGACTTAGCAATCGTGTTTATCCTAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TLQGRRVHVHTSESG*SRMRLSNRVYPKVC
Trigger: GCAGACCTTAGGATAAACACGATTGCTAAGTCTCATTCTTGACCAGCCCGACTCACTTGTGTGCACGTGAACACGTCTCCCCTGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CCA 90 bp CAGAATGAGGCACCACCTCCTAGAGGAAGAGCCCAGGAAGGGTTGTaGAGACATACAGAACACCAACTGCCATGCTTGGATGTTTGCTAT +
Preference number: 5 (lower is better)
Translates to: QNEAPPPRGRAQEGL*RHTEHQLPCLDVCY
Trigger: ATAGCAAACATCCAAGCATGGCAGTTGGTGTTCTGTATGTCTCCACAACCCTTCCTGGGCTCTTCCTCTAGGAGGTGGTGCCTCATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS-3UTR CAA 90 bp CCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGTTGGGCGATGTTaGTCACAAAATGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: PECSLPKPDGGAQLHTLLCVGRC*SQNDLY
Trigger: GTACAAATCATTTTGTGACAAACATCGCCCAACACA...CAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTGTGTTGGGCGATGTTaGTCACAAAATGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSCVGRC*SQNDLY
Trigger: GTACAAATCATTTTGTGACAAACATCGCCCAACACA...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGTGTGTTGGGCGATGTTaGTCACAAAATGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: VLPPQTRWRSAASYPIVWCVGRC*SQNDLY
Trigger: GTACAAATCATTTTGTGACAAACATCGCCCAACACA...CCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGAAAGCTGTCTCTGCCTaGTTCATACAGACAGATGGG +
Preference number: 5 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRKAVSA*FIQTDG
Trigger: CCCATCTGTCTGTATGAACAAGGCAGAGACAGCTTT...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327906.8
ENST00000461861.5
CDS-3UTR CAA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTCTCTTCCAAGGTGTaGTCTCTGCAGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVFSSKV*SLQKCS
Trigger: GGAACATTTCTGCAGAGACAACACCTTGGAAGAGAA...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS TCA 90 bp CAACCCCTTTCTTGGCCACAAGGCAGATGGAAGTTTCTGAGGCACTaGTCCTTCTGGCAGTTGATAGCAGCTCCCTTTTTCTTGCACACA +
Preference number: 5 (lower is better)
Translates to: QPLSWPQGRWKFLRH*SFWQLIAAPFFLHT
Trigger: TGTGTGCAAGAAAAAGGGAGCTGCTATCAACTGCCAGAAGGATCAGTGCCTCAGAAACTTCCATCTGCCTTGTGGCCAAGAAAGGGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000472337.5
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS CCA 90 bp TTCTCGAAGCATAGCCAGCAAACAGGCCCTGAAGACGGTTTCCTCTaGGTTACCCTCCTAGTCTTGGCAGATTTTCTCAATCTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: FSKHSQQTGPEDGFL*VTLLVLADFLNLWH
Trigger: ATGCCAGAGATTGAGAAAATCTGCCAAGACTAGGAGGGTAACCCAGAGGAAACCGTCTTCAGGGCCTGTTTGCTGGCTATGCTTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CAA 90 bp GCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGATCTCTCTCTCCTCTCTaGAATTCTTCTATACTATTG +
Preference number: 5 (lower is better)
Translates to: APSPNPMEERSFIPYCVGSLSPL*NSSILL
Trigger: CAATAGTATAGAAGAATTCAAGAGAGGAGAGAGAGA...TCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR CAA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: RHSCSHKRISLLASGLLPRAASF*MSSGRN
Trigger: ATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCG...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGGTTGGATGTTCTGTGTaGGGCGATGTTTGTCACAAA +
Preference number: 5 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRVGCSV*GDVCHK
Trigger: TTTGTGACAAACATCGCCCAACACAGAACATCCAAC...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGTTACACTGTGGACATTaGAAGAAATGCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: CSLPKPDGGAQLHTLLCGLHCGH*KKCFAD
Trigger: ATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAA...CCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTACACTGTGGACATTaGAAGAAATGCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYLHCGH*KKCFAD
Trigger: ATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAA...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCTTACACTGTGGACATTaGAAGAAATGCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: PPQTRWRSAASYPIVWDSLHCGH*KKCFAD
Trigger: ATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAA...GCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp ATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTTCTCTTCCAAGGTGTaGTCTCTGCAGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: MEERSFIPYCVGQQLLRRFSSKV*SLQKCS
Trigger: GGAACATTTCTGCAGAGACAACACCTTGGAAGAGAA...CCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GTTGTCTCTGCAGAAATGTTCCTCAGGGTGGAAGGTGCTGCTGCAGCAAGGGATTTCTCTTCCAAGGTGTaGTCTCTGCAGAAATGTTCC +
Preference number: 5 (lower is better)
Translates to: VVSAEMFLRVEGAAAARDFSSKV*SLQKCS
Trigger: GGAACATTTCTGCAGAGACAACACCTTGGAAGAGAA...ATCCCTTGCTGCAGCAGCACCTTCCACCCTGAGGAACATTTCTGCAGAGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CAA 90 bp TCCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTTACTTGGATTTTTaGCAGCTGTTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: SQSAPSPNPMEERSFIPYCYLDF*QLLVIL
Trigger: CAGAATCACTAACAGCTGCAAAAAATCCAAGTAACA...ATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp CCCAGAGTGCTCCCTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTTGTTACTTGGATTTTTaGCAGCTGTTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: PRVLPPQTRWRSAASYPICYLDF*QLLVIL
Trigger: CAGAATCACTAACAGCTGCAAAAAATCCAAGTAACA...AATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAGGGAGCACTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: RHSCSHKRISLLASGLLPQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS TCA 90 bp TCTTCAGGCAGAAATCCATGGAAGCCTCTGTTGGACTGGCCCCTCTaGGGCAGCTTACTAGATAAGATCTCAATCTCTGGCATTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SSGRNPWKPLLDWPL*GSLLDKISISGIPS
Trigger: AGAAGGAATGCCAGAGATTGAGATCTTATCTAGTAAGCTGCCTCAGAGGGGCCAGTCCAACAGAGGCTTCCATGGATTTCTGCCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472337.5
CDS-3UTR CAA 90 bp TCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCATTCTCAGCATTTCTaGAGGAAACTCTTTTCGATT +
Preference number: 5 (lower is better)
Translates to: SPNPMEERSFIPYCVGQQHSQHF*RKLFSI
Trigger: AATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAATG...CTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
CDS-3UTR CAA 90 bp CTCCCCAAACCCGATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCACATTCTCAGCATTTCTaGAGGAAACTCTTTTCGATT +
Preference number: 5 (lower is better)
Translates to: LPKPDGGAQLHTLLCGTAHSQHF*RKLFSI
Trigger: AATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAATG...TGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATCGGGTTTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
CDS-3UTR CAA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCATAAACGCATTTCCTaGTTGGCATCTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: RHSCSHKRISLLASGLLPHKRIS*LASGLL
Trigger: GAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATG...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
ENST00000615126.1
CDS TCA 90 bp GGAGACGTGTTCACGTGCACACAAGTGAGTCGGGCTGGTCAAGAATaGGACTTAGCAATCGTGTTTATCCTAAGGTCTGCATACAAGAGT +
Preference number: 5 (lower is better)
Translates to: GDVFTCTQVSRAGQE*DLAIVFILRSAYKS
Trigger: ACTCTTGTATGCAGACCTTAGGATAAACACGATTGCTAAGTCTCATTCTTGACCAGCCCGACTCACTTGTGTGCACGTGAACACGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS TCA 90 bp CACATTTTACCCAAGATGAATGTATGGCTCAGAGAGGATGAGTGCTaGTCCCAGAAGCCTGCCATCAGTCGTAACCCCTTGAAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: HILPKMNVWLREDEC*SQKPAISRNPLKGR
Trigger: TCTACCTTTCAAGGGGTTACGACTGATGGCAGGCTTCTGGGATCAGCACTCATCCTCTCTGAGCCATACATTCATCTTGGGTAAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS-3UTR CAA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTCTCTCTCTCCTCTCTaGAATTCTTCTATACTATTG +
Preference number: 5 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVSLSPL*NSSILL
Trigger: CAATAGTATAGAAGAATTCAAGAGAGGAGAGAGAGA...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR CAA 90 bp GGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTGTTACTTGGATTTTTaGCAGCTGTTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: GGAQLHTLLCGTAATQKVCYLDF*QLLVIL
Trigger: CAGAATCACTAACAGCTGCAAAAAATCCAAGTAACA...CACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp AGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATCAGCTTCATACCCTATaGTGTGGGACAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: SFIPYCVGQQLLRRCYLDQLHTL*CGTAAT
Trigger: AGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTG...ATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS GCA 90 bp GGATGTTCTCAACACTCTGTTGGGATAAGTCTTCACAACATAAGATaGAGCTTTCCTCCCCCACATGCCCATGTTGGATGTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GCSQHSVGISLHNIR*SFPPPHAHVGCSVL
Trigger: CAACACAGAACATCCAACATGGGCATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTTCTCTCTCTCCTCTCTaGAATTCTTCTATACTATTG +
Preference number: 5 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGSLSPL*NSSILL
Trigger: CAATAGTATAGAAGAATTCAAGAGAGGAGAGAGAGA...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000614886.4
CDS-3UTR CAA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTTTACACTGTGGACATTaGAAGAAATGCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGLHCGH*KKCFAD
Trigger: ATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAA...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp GATGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGTGTTACTTGGATTTTTaGCAGCTGTTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: DGGAQLHTLLCGTAATQKCYLDF*QLLVIL
Trigger: CAGAATCACTAACAGCTGCAAAAAATCCAAGTAACA...CTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TGGAGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTTGTTACTTGGATTTTTaGCAGCTGTTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: WRSAASYPIVWDSSYSEGCYLDF*QLLVIL
Trigger: CAGAATCACTAACAGCTGCAAAAAATCCAAGTAACA...ACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000614886.4
ENST00000615126.1
CDS GCA 90 bp TGGGATAAGTCTTCACAACATAAGATGCAGCTTTCCTCCCCCACATaGCCATGTTGGATGTTCTGTGTTGGGCGATGTTTGTCACAAAAT +
Preference number: 5 (lower is better)
Translates to: WDKSSQHKMQLSSPT*PCWMFCVGRCLSQN
Trigger: ATTTTGTGACAAACATCGCCCAACACAGAACATCCAACATGGGCATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAGACTTATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000472337.5
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp AGGAGCGCAGCTTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTCATTCTCAGCATTTCTaGAGGAAACTCTTTTCGATT +
Preference number: 5 (lower is better)
Translates to: RSAASYPIVWDSSYSEGVHSQHF*RKLFSI
Trigger: AATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAATG...AACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAAGCTGCGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465863.1
CDS CCA 90 bp TCTTCACAACATAAGATGCAGCTTTCCTCCCCCACATGCCCATGTTaGATGTTCTGTGTTGGGCGATGTTTGTCACAAAATGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: SSQHKMQLSSPTCPC*MFCVGRCLSQNDLY
Trigger: GTACAAATCATTTTGTGACAAACATCGCCCAACACAGAACATCCAACATGGGCATGTGGGGGAGGAAAGCTGCATCTTATGTTGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000472337.5
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS-3UTR CAA 90 bp TCTAATAAGGAAGGTTCTGGCCAATCAGTCCAAGAAAGGCCCGGATTCTCTTCCTGTGTTGGGCGATGTTaGTCACAAAATGATTTGTAC +
Preference number: 5 (lower is better)
Translates to: SNKEGSGQSVQERPGFSSCVGRC*SQNDLY
Trigger: GTACAAATCATTTTGTGACAAACATCGCCCAACACA...GGAAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCTTCCTTATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CAA 90 bp AGGCACTCTTGTAGCCATAAACGCATTTCCTTGTTGGCATCTGGACTGCTCCCTCATTCTCAGCATTTCTaGAGGAAACTCTTTTCGATT +
Preference number: 5 (lower is better)
Translates to: RHSCSHKRISLLASGLLPHSQHF*RKLFSI
Trigger: AATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAATG...AGGGAGCAGTCCAGATGCCAACAAGGAAATGCGTTTATGGCTACAAGAGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS-3UTR CAA 90 bp TTTCAGGTATGTAGTCTGTGGCTGCAGCAGGTGAACACTCCTCACACTCCCATTTGTTACTTGGATTTTTaGCAGCTGTTAGTGATTCTG +
Preference number: 5 (lower is better)
Translates to: FQVCSLWLQQVNTPHTPICYLDF*QLLVIL
Trigger: CAGAATCACTAACAGCTGCAAAAAATCCAAGTAACA...AATGGGAGTGTGAGGAGTGTTCACCTGCTGCAGCCACAGACTACATACCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS GCA 90 bp TTGAGGAAACTCTTTCGATTGTTACACTGTGGACATTTGAAGAAATaGTTTGCTGATGTGTGGGCATATTTCTGTATGCACTTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LRKLFRLLHCGHLKK*FADVWAYFCMHLRW
Trigger: CCACCGCAAGTGCATACAGAAATATGCCCACACATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAACAATCGAAAGAGTTTCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CAA 90 bp TTCATACCCTATTGTGTGGGACAGCAGCTACTCAGAAGGTGTTACTTGGATTTTTTACACTGTGGACATTaGAAGAAATGCTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: FIPYCVGQQLLRRCYLDFLHCGH*KKCFAD
Trigger: ATCAGCAAAGCATTTCTTCAAATGTCCACAGTGTAA...AAAATCCAAGTAACACCTTCTGAGTAGCTGCTGTCCCACACAATAGGGTATGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000465863.1
ENST00000615126.1
CDS-3UTR CAA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCATTCTCAGCATTTCTaGAGGAAACTCTTTCGATTG +
Preference number: 5 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEHSQHF*RKLFRL
Trigger: CAATCGAAAGAGTTTCCTCAAGAAATGCTGAGAATG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS-3UTR CAA 90 bp AGTAAGAAGAGGCATATGAAAACAAGATTAAGGTGGAAGAATCCTTGGTGGGAGCATTCTCAGCATTTCTaGAGGAAACTCTTTTCGATT +
Preference number: 5 (lower is better)
Translates to: SKKRHMKTRLRWKNPWWEHSQHF*RKLFSI
Trigger: AATCGAAAAGAGTTTCCTCAAGAAATGCTGAGAATG...CTCCCACCAAGGATTCTTCCACCTTAATCTTGTTTTCATATGCCTCTTCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000614886.4
CDS GCA 72 bp CATCCCGCGGATGCCAGACCAGGCTCATGTCGCGCCTaGCGGGCGGCCAGTGCAGGGCCGGGCCGAGGTCGC +
Preference number: 6 (lower is better)
Translates to: HPADARPGSCRA*RAASAGPGRGR
Trigger: GCGACCTCGGCCCGGCCCTGCACTGGCCGCCCGGCAGGCGCGACATGAGCCTGGTCTGGCATCCGCGGGATG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327906.8
CDS TCA 72 bp GGCTCTTCCAGCTTGCTATTCCCACAGGGGTCCACGTaGGCGGACTGCGGAGCAGTTCCCAGTTACTGGGGC +
Preference number: 6 (lower is better)
Translates to: GSSSLLFPQGST*ADCGAVPSYWG
Trigger: GCCCCAGTAACTGGGAACTGCTCCGCAGTCCGCTCACGTGGACCCCTGTGGGAATAGCAAGCTGGAAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473145.5
CDS CCA 72 bp GCTGCCTCCTTTTTGATGTCTTCAGGCAGAAATCCATaGAGCCTCTGTTGGACTGGCCCCTCTGAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: AASFLMSSGRNP*SLCWTGPSEAA
Trigger: AGCTGCCTCAGAGGGGCCAGTCCAACAGAGGCTCCATGGATTTCTGCCTGAAGACATCAAAAAGGAGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS CAA 72 bp GAGGCACCACCTCCTAGAGGAAGAGCCCAGGAAGGGTaGTGGAGACATACAGAACACCAACTGCCATGCTTG +
Preference number: 6 (lower is better)
Translates to: EAPPPRGRAQEG*WRHTEHQLPCL
Trigger: CAAGCATGGCAGTTGGTGTTCTGTATGTCTCCACAACCCTTCCTGGGCTCTTCCTCTAGGAGGTGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CCA 72 bp TTAGATCTAAGAGAGGAGCAGTCCCTGTGGGTTCCGTaGGATCCGCATGTAGCACACAGAATGAGGCACCAC +
Preference number: 6 (lower is better)
Translates to: LDLREEQSLWVP*DPHVAHRMRHH
Trigger: GTGGTGCCTCATTCTGTGTGCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000459935.1
ENST00000461861.5
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS CAA 90 bp ACACAGAATGAGGCACCACCTCCTAGAGGAAGAGCCCAGGAAGGGTaGTGGAGACATACAGAACACCAACTGCCATGCTTGGATGTTTGC +
Preference number: 6 (lower is better)
Translates to: TQNEAPPPRGRAQEG*WRHTEHQLPCLDVC
Trigger: GCAAACATCCAAGCATGGCAGTTGGTGTTCTGTATGTCTCCACAACCCTTCCTGGGCTCTTCCTCTAGGAGGTGGTGCCTCATTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CAA 90 bp TTGCACACAAAGCAGATCTTCCTAGAAGCCCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAATCCATGGAGCCTCTGTTGGACTGGC +
Preference number: 6 (lower is better)
Translates to: LHTKQIFLEARAASF*MSSGRNPWSLCWTG
Trigger: GCCAGTCCAACAGAGGCTCCATGGATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGGAAGATCTGCTTTGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS CAA 90 bp TTGCACACAAAGCAGATCTTCCTAGAAGCCCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAATCCATGGAAGCCTCTGTTGGACTGG +
Preference number: 6 (lower is better)
Translates to: LHTKQIFLEARAASF*MSSGRNPWKPLLDW
Trigger: CCAGTCCAACAGAGGCTTCCATGGATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGGAAGATCTGCTTTGTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000472337.5
ENST00000614886.4
CDS TCA 72 bp ACGATCTTCAAAACATCTGAGGGGTGGCTTTGCAAATaGGGCTTCCACAAGCTGCCAGGCAGTGGCTTCCTA +
Preference number: 6 (lower is better)
Translates to: TIFKTSEGWLCK*GFHKLPGSGFL
Trigger: TAGGAAGCCACTGCCTGGCAGCTTGTGGAAGCCTCATTTGCAAAGCCACCCCTCAGATGTTTTGAAGATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000473145.5
ENST00000482327.5
CDS GCA 72 bp CCCAGGAAGGGTTGTGGAGACATACAGAACACCAACTaGCATGCTTGGATGTTTGCTATGGGCCAGGCATTT +
Preference number: 6 (lower is better)
Translates to: PRKGCGDIQNTN*HAWMFAMGQAF
Trigger: AAATGCCTGGCCCATAGCAAACATCCAAGCATGGCAGTTGGTGTTCTGTATGTCTCCACAACCCTTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CAA 72 bp AAGCAGATCTTCCTAGAAGCCCGGGCTGCCTCCTTTTaGATGTCTTCAGGCAGAAATCCATGGAGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: KQIFLEARAASF*MSSGRNPWSLC
Trigger: ACAGAGGCTCCATGGATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGGAAGATCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615126.1
CDS CAA 90 bp CTCTCTAGAAATCTAGGCAACCCACTCCCTGGCTCAGTTCCTGCTTaGGGGTTCCCACTACCTGTCTGGAATATGAATTCCCATTCTCAG +
Preference number: 6 (lower is better)
Translates to: LSRNLGNPLPGSVPA*GFPLPVWNMNSHSQ
Trigger: CTGAGAATGGGAATTCATATTCCAGACAGGTAGTGGGAACCCCAAAGCAGGAACTGAGCCAGGGAGTGGGTTGCCTAGATTTCTAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498509.2
CDS TCA 72 bp AGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTCTGTCTGGAATATGAA +
Preference number: 6 (lower is better)
Translates to: RVEGAAAARDVP*VFRYVVCLEYE
Trigger: TTCATATTCCAGACAGACTACATACCTGAAAACTCAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465863.1
CDS TCA 72 bp AGAAATCCATGGAAGCCTCTGTTGGACTGGCCCCTCTaGGGCAGCTTACTAGATAAGATCTCAATCTCTGGC +
Preference number: 6 (lower is better)
Translates to: RNPWKPLLDWPL*GSLLDKISISG
Trigger: GCCAGAGATTGAGATCTTATCTAGTAAGCTGCCTCAGAGGGGCCAGTCCAACAGAGGCTTCCATGGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472337.5
CDS GCA 72 bp CTTGCACACAAAGCAGATCTTCCTAGAAGCCCGGGCTaGCTCCTTTTTGATGTCTTCAGGCAGAAATCCATG +
Preference number: 6 (lower is better)
Translates to: LAHKADLPRSPG*LLFDVFRQKSM
Trigger: CATGGATTTCTGCCTGAAGACATCAAAAAGGAGGCAGCCCGGGCTTCTAGGAAGATCTGCTTTGTGTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000472337.5
ENST00000614886.4
ENST00000615126.1
CDS CCA 72 bp CATAGCCAGCAAACAGGCCCTGAAGACGGTTTCCTCTaGGTTACCCTCCTAGTCTTGGCAGATTTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: HSQQTGPEDGFL*VTLLVLADFLN
Trigger: ATTGAGAAAATCTGCCAAGACTAGGAGGGTAACCCAGAGGAAACCGTCTTCAGGGCCTGTTTGCTGGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000473145.5
ENST00000482327.5
ENST00000614886.4
ENST00000615126.1
CDS CCA 72 bp TTCTTACTGTTAGATCTAAGAGAGGAGCAGTCCCTGTaGGTTCCGTGGGATCCGCATGTAGCACACAGAATG +
Preference number: 6 (lower is better)
Translates to: FLLLDLREEQSL*VPWDPHVAHRM
Trigger: CATTCTGTGTGCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATCTAACAGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000459935.1
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS CCA 72 bp GGGAGACGTGTTCACGTGCACACAAGTGAGTCGGGCTaGTCAAGAATGAGACTTAGCAATCGTGTTTATCCT +
Preference number: 6 (lower is better)
Translates to: GRRVHVHTSESG*SRMRLSNRVYP
Trigger: AGGATAAACACGATTGCTAAGTCTCATTCTTGACCAGCCCGACTCACTTGTGTGCACGTGAACACGTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS TCA 72 bp AGGGTGGAAGGTGCTGCTGCAGCAAGGGATGTCCCCTaGGTTTTCAGGTATGTAGTTGTTAGATCTAAGAGA +
Preference number: 6 (lower is better)
Translates to: RVEGAAAARDVP*VFRYVVVRSKR
Trigger: TCTCTTAGATCTAACAACTACATACCTGAAAACTCAGGGGACATCCCTTGCTGCAGCAGCACCTTCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461861.5
CDS CCA 72 bp TGTGGGCATATTTCTGTATGCACTTGCGGTGGTAGATaGCTTGACTACAACACGGGCTCTGGATGTTCTCAA +
Preference number: 6 (lower is better)
Translates to: CGHISVCTCGGR*LDYNTGSGCSQ
Trigger: TTGAGAACATCCAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGTGCATACAGAAATATGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS CAA 72 bp GGCATATTTCTGTATGCACTTGCGGTGGTAGATGGCTaGACTACAACACGGGCTCTGGATGTTCTCAACACT +
Preference number: 6 (lower is better)
Translates to: GIFLYALAVVDG*TTTRALDVLNT
Trigger: AGTGTTGAGAACATCCAGAGCCCGTGTTGTAGTCAAGCCATCTACCACCGCAAGTGCATACAGAAATATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000465863.1
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1
CDS TCA 72 bp CTGCTAGTTACAAGACGTCACGATCTTCAAAACATCTaGGGGGTGGCTTTGCAAATGAGGCTTCCACAAGCT +
Preference number: 6 (lower is better)
Translates to: LLVTRRHDLQNI*GVALQMRLPQA
Trigger: AGCTTGTGGAAGCCTCATTTGCAAAGCCACCCCTCAGATGTTTTGAAGATCGTGACGTCTTGTAACTAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327906.8
ENST00000473145.5
ENST00000482327.5
CDS TCA 72 bp TTCACGTGCACACAAGTGAGTCGGGCTGGTCAAGAATaGGACTTAGCAATCGTGTTTATCCTAAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: FTCTQVSRAGQE*DLAIVFILRSA
Trigger: TGCAGACCTTAGGATAAACACGATTGCTAAGTCTCATTCTTGACCAGCCCGACTCACTTGTGTGCACGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459935.1
ENST00000498509.2
CDS CCA 72 bp CTACAACACGGGCTCTGGATGTTCTCAACACTCTGTTaGGATAAGTCTTCACAACATAAGATGCAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LQHGLWMFSTLC*DKSSQHKMQLS
Trigger: GGAAAGCTGCATCTTATGTTGTGAAGACTTATCCCAACAGAGTGTTGAGAACATCCAGAGCCCGTGTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327906.8
ENST00000347025.6
ENST00000461861.5
ENST00000498509.2
ENST00000614886.4
ENST00000615126.1