RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000156531

Ensembl transcript IDs: ENST00000332070.7, ENST00000370799.5, ENST00000370800.4, ENST00000370803.8, ENST00000625464.2

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCAGGCTGGTCTCTACCTCCAGGGCTCAGGCAATCCTCCAGTCTaGGCCTCCTGTATAGCTGGGGCTACAGGCGTGTGCCACTTTGCC +
Preference number: 1 (lower is better)
Translates to: AQAGLYLQGSGNPPV*ASCIAGATGVCHFA
Trigger: GGCAAAGTGGCACACGCCTGTAGCCCCAGCTATACAGGAGGCCCAGACTGGAGGATTGCCTGAGCCCTGGAGGTAGAGACCAGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR TCA 90 bp CTCCTACAGCACATGAGACCTCCTTACGTACTGTGCGCCAATATGTaGAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCGG +
Preference number: 1 (lower is better)
Translates to: LLQHMRPPYVLCANM*SVPHNRALERNRFR
Trigger: CCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGCACAGTACGTAAGGAGGTCTCATGTGCTGTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR TCA 90 bp CGTACTGTGCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTaGGAGGAACAGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAG +
Preference number: 1 (lower is better)
Translates to: RTVRQYVKCSTQQGT*EEQVSDMVSEVLSK
Trigger: CTTGCTAAGGACTTCAGACACCATGTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGCACAGTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CCA 90 bp AGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCGGACATaGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACATCT +
Preference number: 1 (lower is better)
Translates to: SVPHNRALERNRFRT*CLKSLASGNPFFTS
Trigger: AGATGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CCA 90 bp CTTCTGTCTACCATATCCTATTCTAAGCTACCAATAATTCTCACCTaGACCACCAGCACTAGCCTCCTAACACATCTCCCCATTTCCACC +
Preference number: 1 (lower is better)
Translates to: LLSTISYSKLPIILT*TTSTSLLTHLPIST
Trigger: GGTGGAAATGGGGAGATGTGTTAGGAGGCTAGTGCTGGTGGTCCAGGTGAGAATTATTGGTAGCTTAGAATAGGATATGGTAGACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CCA 90 bp TTCAAGCACAATGGCTGGCACATAGGAAGCCTAACTAATATTGGATaGATGAATGCTAATCCAGGGATATGTAGTCAGAGGAAAATGCCA +
Preference number: 1 (lower is better)
Translates to: FKHNGWHIGSLTNIG*MNANPGICSQRKMP
Trigger: TGGCATTTTCCTCTGACTACATATCCCTGGATTAGCATTCATCCATCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATTGTGCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR GCA 90 bp GAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAAGGAAGTaGTTTACAACTCTGGATGGCAAATCAAAACTTCAAGAGTCCCTA +
Preference number: 1 (lower is better)
Translates to: EVIGLLHSRHVRVRK*FTTLDGKSKLQESL
Trigger: TAGGGACTCTTGAAGTTTTGATTTGCCATCCAGAGTTGTAAAGCACTTCCTTACTCTCACATGCCTAGAATGCAATAAACCAATGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATaGAACCATTACAGATATACATTAACACCACCTAGCACAAGGCAG +
Preference number: 1 (lower is better)
Translates to: TSRVPTNLYSSRLNK*NHYRYTLTPPSTRQ
Trigger: CTGCCTTGTGCTAGGTGGTGTTAATGTATATCTGTAATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR TCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAACTTCTGACCTCAGGTaGTTCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVTSDLR*FTRLGL
Trigger: GAGGCCGAGGCGGGTGAATCACCTGAGGTCAGAAGT...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCCCACAAATTACCATGTaGTGCCACCAGTGGCATGTT +
Preference number: 2 (lower is better)
Translates to: APICEVFHTTGHLRGTGFPQITM*CHQWHV
Trigger: AACATGCCACTGGTGGCAGCACATGGTAATTTGTGG...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 90 bp GCTCTTCTCTCTGCCCAGAATACCTCCCCCAACCAAGGCTCACCTTaGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: ALLSAQNTSPNQGSP*SLISQLKAEHYFLQ
Trigger: CTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGAGCCTTGGTTGGGGGAGGTATTCTGGGCAGAGAGAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR TCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTCTGTGCGCCAATATGTaGAGTGTTCCACACAACAGG +
Preference number: 2 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVILCANM*SVPHNR
Trigger: CCTGTTGTGTGGAACACTTCACATATTGGCGCACAG...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAAGTTGCCTGAGTCCATaGTGGTCAGTGAGAACAACT +
Preference number: 2 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTSCLSP*WSVRTT
Trigger: AGTTGTTCTCACTGACCAGCATGGACTCAGGCAACT...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAACTCACCCGGGGCTCTTaGATATGCTCTTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKLTRGS*ICSSLC
Trigger: GCAGAGAGAAGAGCATATGCAAGAGCCCCGGGTGAG...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR GCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAGAAAGAGAGGAGGTGTaGTGTCAAGAGAATTTTGGC +
Preference number: 2 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTEREEV*CQENFG
Trigger: GCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTC...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCCACCAGTGGCATGTTTaGATTGTAAAGGAAAATTTG +
Preference number: 2 (lower is better)
Translates to: APICEVFHTTGHLRGTGFHQWHV*IVKENL
Trigger: CAAATTTTCCTTTACAATGCAAACATGCCACTGGTG...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATGGGATTACAGGTGCCTaGCACCACACCTGGGTAATT +
Preference number: 2 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHGITGA*HHTWVI
Trigger: AATTACCCAGGTGTGGTGGCAGGCACCTGTAATCCC...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR GCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATTTGCTCAGGCTGGAGTaGAATGGCGCAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHLLRLE*NGAILA
Trigger: AGCCAAGATTGCGCCATTGCACTCCAGCCTGAGCAA...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTAACAGGTTTCGGACATaGTGTCTGAAGTCCTTAGCA +
Preference number: 2 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVINRFRT*CLKSLA
Trigger: TGCTAAGGACTTCAGACACCATGTCCGAAACCTGTT...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 90 bp AGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTCAGTGAGAACAACTTTAACAGGAAC +
Preference number: 2 (lower is better)
Translates to: RILAKALELIAYHYQ*PESMLVSENNFNRN
Trigger: GTTCCTGTTAAAGTTGTTCTCACTGACCAGCATGGACTCAGGCAACTGGTAATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAATATGCTCTTCTCTCTaGCCAGAATACCTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVICSSL*PEYLPQ
Trigger: TTGGGGGAGGTATTCTGGGCAGAGAGAAGAGCATAT...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CCA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACCAGCTTCAAGCACAATaGCTGGCACATAGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNQLQAQ*LAHRKP
Trigger: AGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTG...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR TCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTCTGTGCGCCAATATGTaGAGTGTTCCACACAACAGG +
Preference number: 2 (lower is better)
Translates to: YHNVITTQKMMMLLGNISLCANM*SVPHNR
Trigger: CCTGTTGTGTGGAACACTTCACATATTGGCGCACAG...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR TCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTCCCTCCCCTTGGTACTaGGGTGCTATGGTAGTATCA +
Preference number: 2 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCPSPWY*GAMVVS
Trigger: TGATACTACCATAGCACCTCAGTACCAAGGGGAGGG...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR TCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAACCCAAATGACTTGGTaGCTGCTTGTGTACATTGTC +
Preference number: 2 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKTQMTW*LLVYIV
Trigger: GACAATGTACACAAGCAGTCACCAAGTCATTTGGGT...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAACTTATCATTACCAGTTaGCTGAGTCCATGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: PLYNMEREEVCCQENFGKLIITS*LSPCWS
Trigger: TGACCAGCATGGACTCAGGCAACTGGTAATGATAAG...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCTTATCATTACCAGTTaGCTGAGTCCATGCTGGTCA +
Preference number: 2 (lower is better)
Translates to: SIILPEVLCITWKERRCALIITS*LSPCWS
Trigger: TGACCAGCATGGACTCAGGCAACTGGTAATGATAAG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGGTGAGAGTAAGGAAGTaGTTTACAACTCTGGATGGC +
Preference number: 2 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWVRVRK*FTTLDG
Trigger: GCCATCCAGAGTTGTAAAGCACTTCCTTACTCTCAC...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTTGCCTGAGTCCATGCTaGTCAGTGAGAACAACTTTA +
Preference number: 2 (lower is better)
Translates to: SIILPEVLCITWKERRCACLSPC*SVRTTL
Trigger: TAAAGTTGTTCTCACTGACCAGCATGGACTCAGGCA...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTCCACAAATTACCATGTaGTGCCACCAGTGGCATGTT +
Preference number: 2 (lower is better)
Translates to: YHNVITTQKMMMLLGNISPQITM*CHQWHV
Trigger: AACATGCCACTGGTGGCAGCACATGGTAATTTGTGG...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAGAGATTTTTAGCATGTaGTGTCAAAGTCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTEIFSM*CQSQEK
Trigger: TTTCTCTTGACTTTGACAGCACATGCTAAAAATCTC...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTAGTTGCCTGAGTCCATaGTGGTCAGTGAGAACAACT +
Preference number: 2 (lower is better)
Translates to: YHNVITTQKMMMLLGNISSCLSP*WSVRTT
Trigger: AGTTGTTCTCACTGACCAGCATGGACTCAGGCAACT...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTTGCCTGAGTCCATGCTaGTCAGTGAGAACAACTTTA +
Preference number: 2 (lower is better)
Translates to: AGKWKKISLPRNASVKILCLSPC*SVRTTL
Trigger: TAAAGTTGTTCTCACTGACCAGCATGGACTCAGGCA...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 90 bp CATTGTCTTTTACACAGAATACTAGACCCGGAAGTCATTGGTTTATaGCATTCTAGGCATGTGAGAGTAAGGAAGTGCTTTACAACTCTG +
Preference number: 2 (lower is better)
Translates to: HCLLHRILDPEVIGL*HSRHVRVRKCFTTL
Trigger: CAGAGTTGTAAAGCACTTCCTTACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCTGTGTAAAAGACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR TCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATGTGTGTATTGTATCCTaGCAACAGATCCCATATAAT +
Preference number: 2 (lower is better)
Translates to: RCAVKRILAKALELIAYHVCIVS*QQIPYN
Trigger: ATTATATGGGATCTGTTGTCAGGATACAATACACAC...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332070.7
3UTR-3UTR GCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTGAAAGAGAGGAGGTGTaGTGTCAAGAGAATTTTGGC +
Preference number: 2 (lower is better)
Translates to: YHNVITTQKMMMLLGNISEREEV*CQENFG
Trigger: GCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTC...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 90 bp TTGCTGTTGCCAAATGTTAGTTTAAACTTGAAGGACTCAATCATTTaGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: LLLPNVSLNLKDSII*PEVLCITWKERRCA
Trigger: AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAGTCCTTCAAGTTTAAACTAACATTTGGCAACAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAACACCAGTGGCATGTTTaGATTGTAAAGGAAAATTTG +
Preference number: 2 (lower is better)
Translates to: PLYNMEREEVCCQENFGKHQWHV*IVKENL
Trigger: CAAATTTTCCTTTACAATGCAAACATGCCACTGGTG...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTCTGTCAAGAGAATTTTaGCAAAAGCACTGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: YHNVITTQKMMMLLGNISLSREF*QKHWSS
Trigger: TGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAG...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 90 bp AATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTaGGTGACTGCTTGTGTACATTGTCTTTTACACAGAATACTAGAC +
Preference number: 2 (lower is better)
Translates to: NFIIQHSALCRHPND*VTACVHCLLHRILD
Trigger: GTCTAGTATTCTGTGTAAAAGACAATGTACACAAGCAGTCACCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR TCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTTCTAACTCTGTCCCATaGACCTGTTTAAAAGATGAT +
Preference number: 2 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSSNSVP*TCLKDD
Trigger: ATCATCTTTTAAACAGGTTCATGGGACAGAGTTAGA...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332070.7
3UTR-3UTR GCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGCACCAGTGGCATGTTTaGATTGTAAAGGAAAATTTG +
Preference number: 2 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEHQWHV*IVKENL
Trigger: CAAATTTTCCTTTACAATGCAAACATGCCACTGGTG...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACGTCCTTTGTATAACATaGAAAGAGAGGAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNVLCIT*KERRCA
Trigger: AGCACACCTCCTCTCTTTCCATGTTATACAAAGGAC...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTGTCCTTTGTATAACATaGAAAGAGAGGAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCVLCIT*KERRCA
Trigger: AGCACACCTCCTCTCTTTCCATGTTATACAAAGGAC...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CCA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGCTTTACAACTCTGGATaGCAAATCAAAACTTCAAGA +
Preference number: 2 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWLYNSG*QIKTSR
Trigger: TCTTGAAGTTTTGATTTGCCATCCAGAGTTGTAAAG...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR GCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTGAGATTTTTAGCATGTaGTGTCAAAGTCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: AGKWKKISLPRNASVKILEIFSM*CQSQEK
Trigger: TTTCTCTTGACTTTGACAGCACATGCTAAAAATCTC...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACGCTTCAGCAGGTAAGTaGAAGAAAATATCACTACCT +
Preference number: 2 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNASAGK*KKISLP
Trigger: AGGTAGTGATATTTTCTTCCACTTACCTGCTGAAGC...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTGAGATTTTTAGCATGTaGTGTCAAAGTCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCEIFSM*CQSQEK
Trigger: TTTCTCTTGACTTTGACAGCACATGCTAAAAATCTC...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR GCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTTTTGCCATAAAGAAATaGATAAATGTGCTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCFAIKK*INVLQQ
Trigger: CTGCTGAAGCACATTTATGCATTTCTTTATGGCAAA...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CCA 72 bp CTCAGGCAATCCTCCAGTCTGGGCCTCCTGTATAGCTaGGGCTACAGGCGTGTGCCACTTTGCCTGGCTAAT +
Preference number: 3 (lower is better)
Translates to: LRQSSSLGLLYS*GYRRVPLCLAN
Trigger: ATTAGCCAGGCAAAGTGGCACACGCCTGTAGCCCCAGCTATACAGGAGGCCCAGACTGGAGGATTGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR GCA 72 bp CACCTCTGCTTCTGTCTCACCCGGGGCTCTTGCATATaGTCTTCTCTCTGCCCAGAATACCTCCCCCAACCA +
Preference number: 3 (lower is better)
Translates to: HLCFCLTRGSCI*SSLCPEYLPQP
Trigger: TGGTTGGGGGAGGTATTCTGGGCAGAGAGAAGAGCATATGCAAGAGCCCCGGGTGAGACAGAAGCAGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR GCA 72 bp TGTCTCACCCGGGGCTCTTGCATATGCTCTTCTCTCTaGCCAGAATACCTCCCCCAACCAAGGCTCACCTTT +
Preference number: 3 (lower is better)
Translates to: CLTRGSCICSSL*PEYLPQPRLTF
Trigger: AAAGGTGAGCCTTGGTTGGGGGAGGTATTCTGGGCAGAGAGAAGAGCATATGCAAGAGCCCCGGGTGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CCA 72 bp CACAACAGGGCACTTGAGAGGAACAGGTTTCGGACATaGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTC +
Preference number: 3 (lower is better)
Translates to: HNRALERNRFRT*CLKSLASGNPF
Trigger: GAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR TCA 72 bp CGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTaGGAGGAACAGGTTTCGGACATGGTGTCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: RQYVKCSTQQGT*EEQVSDMVSEV
Trigger: GACTTCAGACACCATGTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR TCA 72 bp CACATGAGACCTCCTTACGTACTGTGCGCCAATATGTaGAGTGTTCCACACAACAGGGCACTTGAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: HMRPPYVLCANM*SVPHNRALERN
Trigger: GTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGCACAGTACGTAAGGAGGTCTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCGCTGTCAAGAGAATTTaGGCAAAAGCACTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: APICEVFHTTGHLRGTGFAVKRI*AKALEL
Trigger: GAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGC...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTC +
Preference number: 3 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIAYHYQ*PESMLV
Trigger: GACCAGCATGGACTCAGGCAACTGGTAATGATAAGC...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAGCTGTCAAGAGAATTTaGGCAAAAGCACTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTAVKRI*AKALEL
Trigger: GAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGC...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CCA 72 bp ACCATATCCTATTCTAAGCTACCAATAATTCTCACCTaGACCACCAGCACTAGCCTCCTAACACATCTCCCC +
Preference number: 3 (lower is better)
Translates to: TISYSKLPIILT*TTSTSLLTHLP
Trigger: GGGGAGATGTGTTAGGAGGCTAGTGCTGGTGGTCCAGGTGAGAATTATTGGTAGCTTAGAATAGGATATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CAA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCTGCTTATGCTTTCCTTaGAGTATGGATCCACTAAAC +
Preference number: 3 (lower is better)
Translates to: APICEVFHTTGHLRGTGFCLCFP*SMDPLN
Trigger: GTTTAGTGGATCCATACTCAAAGGAAAGCATAAGCA...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCTTTGCCAGAAGTCCTTaGTATAACATGGAAAGAGAG +
Preference number: 3 (lower is better)
Translates to: APICEVFHTTGHLRGTGFFARSP*YNMERE
Trigger: CTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAA...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACATGCTTATGCTTTCCTTaGAGTATGGATCCACTAAAC +
Preference number: 3 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTCLCFP*SMDPLN
Trigger: GTTTAGTGGATCCATACTCAAAGGAAAGCATAAGCA...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACACCACCAGTGGCATGTTaGCATTGTAAAGGAAAATTT +
Preference number: 3 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTPPVAC*HCKGKF
Trigger: AAATTTTCCTTTACAATGCAAACATGCCACTGGTGG...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTCACACAACAGGGCACTaGAGAGGAACAGGTTTCGGA +
Preference number: 3 (lower is better)
Translates to: YHNVITTQKMMMLLGNISHTTGH*RGTGFG
Trigger: TCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTG...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR TCA 72 bp AGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGTaGCTGCTTGTGTACATTGTCTTTTACACAGAATAC +
Preference number: 3 (lower is better)
Translates to: SIAPYVGTQMTW*LLVYIVFYTEY
Trigger: GTATTCTGTGTAAAAGACAATGTACACAAGCAGTCACCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CCA 72 bp AATGGCTGGCACATAGGAAGCCTAACTAATATTGGATaGATGAATGCTAATCCAGGGATATGTAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: NGWHIGSLTNIG*MNANPGICSQR
Trigger: CCTCTGACTACATATCCCTGGATTAGCATTCATCCATCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CAA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTC +
Preference number: 3 (lower is better)
Translates to: YHNVITTQKMMMLLGNISAYHYQ*PESMLV
Trigger: GACCAGCATGGACTCAGGCAACTGGTAATGATAAGC...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CCA 72 bp GCATGTGAGAGTAAGGAAGTGCTTTACAACTCTGGATaGCAAATCAAAACTTCAAGAGTCCCTACCAACTTA +
Preference number: 3 (lower is better)
Translates to: ACESKEVLYNSG*QIKTSRVPTNL
Trigger: TAAGTTGGTAGGGACTCTTGAAGTTTTGATTTGCCATCCAGAGTTGTAAAGCACTTCCTTACTCTCACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CAA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTGCTGTCAAGAGAATTTaGGCAAAAGCACTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: YHNVITTQKMMMLLGNISAVKRI*AKALEL
Trigger: GAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGC...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACCCAGTGTATGTAGTTTaGATCACTGGCATATGCCCA +
Preference number: 3 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNPVYVV*ITGICP
Trigger: TGGGCATATGCCAGTGATCAAAACTACATACACTGG...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CAA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGTCTCAAGAGAATCTTTaGCCTTCTGTCTACCATATC +
Preference number: 3 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWSQENL*PSVYHI
Trigger: GATATGGTAGACAGAAGGCAAAAGATTCTCTTGAGA...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CCA 72 bp GACTCAATCATTTTGCCAGAAGTCCTTTGTATAACATaGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTG +
Preference number: 3 (lower is better)
Translates to: DSIILPEVLCIT*KERRCAVKRIL
Trigger: CAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR GCA 72 bp GGTTTATTGCATTCTAGGCATGTGAGAGTAAGGAAGTaGTTTACAACTCTGGATGGCAAATCAAAACTTCAA +
Preference number: 3 (lower is better)
Translates to: GLLHSRHVRVRK*FTTLDGKSKLQ
Trigger: TTGAAGTTTTGATTTGCCATCCAGAGTTGTAAAGCACTTCCTTACTCTCACATGCCTAGAATGCAATAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR-3UTR CAA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTTGCTTATGCTTTCCTTaGAGTATGGATCCACTAAAC +
Preference number: 3 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCCLCFP*SMDPLN
Trigger: GTTTAGTGGATCCATACTCAAAGGAAAGCATAAGCA...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTCCACCAGTGGCATGTTaGCATTGTAAAGGAAAATTT +
Preference number: 3 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCPPVAC*HCKGKF
Trigger: AAATTTTCCTTTACAATGCAAACATGCCACTGGTGG...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR-3UTR CAA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACTTTGCCAGAAGTCCTTaGTATAACATGGAAAGAGAG +
Preference number: 3 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNFARSP*YNMERE
Trigger: CTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAA...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR GCA 72 bp AACTTCTTTAGAACACTTACGCTGCTATGTTGTAATTaGATATTTGGCCACTTAAATAATAGGTCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: NFFRTLTLLCCN*IFGHLNNRSLP
Trigger: TGGGAGAGACCTATTATTTAAGTGGCCAAATATGCAATTACAACATAGCAGCGTAAGTGTTCTAAAGAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTACAGGCTGGAGTGCAGTaGGGCGATCTCGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLQAGVQ*GDLEAG
Trigger: ACCAGCTTCGAGATCGCCCCACTGCACTCCAGCCTG...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CAA 72 bp CCATTTCCACCTCTGCTTCTGTCTCACCCGGGGCTCTaGCATATGCTCTTCTCTCTGCCCAGAATACCTCCC +
Preference number: 4 (lower is better)
Translates to: PFPPLLLSHPGL*HMLFSLPRIPP
Trigger: GGGAGGTATTCTGGGCAGAGAGAAGAGCATATGCAAGAGCCCCGGGTGAGACAGAAGCAGAGGTGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACATTCTCCAGCAGTGCCTaGGAGCGGGGCTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTFSSSA*ERGSVA
Trigger: GGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAA...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCTCGGTTCTCCAGCAGTaGCTGAGAGCGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFSVLQQ*LRAGLC
Trigger: ACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGA...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTACTATGTTGCCCAGGCTaGTCTCTACCTCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLLCCPG*SLPPGL
Trigger: GAGCCCTGGAGGTAGAGACCAGCCTGGGCAACATAG...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTACTGGTCTCGAACTTCTaGCCTCAGGTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLLVSNF*PQVIHP
Trigger: CGGGTGAATCACCTGAGGTCAGAAGTTCGAGACCAG...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATTTCTCCAGCAGTGCCTaGGAGCGGGGCTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHFSSSA*ERGSVA
Trigger: GGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAA...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTATTGCCCACACTGATCTaGAACTCCTGGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLLPTLI*NSWPQA
Trigger: TGCTTGAGGCCAGGAGTTCCAGATCAGTGTGGGCAA...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAGCAATCCTCTCGCTTTaGCCTCCCAAGTGTGGGATT +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLAILSL*PPKCGI
Trigger: AATCCCACACTTGGGAGGCCAAAGCGAGAGGATTGC...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTATTCTCCAGCAGTGCCTaGGAGCGGGGCTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVFSSSA*ERGSVA
Trigger: GGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAA...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTACTCTTGATGTTGTTGTaGGCTGGACTGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLLLMLL*AGLCQK
Trigger: CTTCTGGCACAGTCCAGCTCACAACAACATCAAGAG...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCATTATTGACTGGCCATaGTTACCCCCGGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFIIDWP*LPPAPS
Trigger: GGAAGGTGCCGGGGGTAATCATGGCCAGTCAATAAT...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAAGGTCAAGGCTGCAGTaGGTCATGATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLRSRLQ*VMITLL
Trigger: CAGTAGTGTGATCATGACTCACTGCAGCCTTGACCT...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCCTGTGCGCCAATATGTaGAGTGTTCCACACAACAGG +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFLCANM*SVPHNR
Trigger: CCTGTTGTGTGGAACACTTCACATATTGGCGCACAG...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACATTAAGTCTCAAGAAATaGGGCAGGGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTLSLKK*GRAQRR
Trigger: CCGCCTCTGGGCCCTGCCGCATTTCTTGAGACTTAA...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCGCACTTATGGTGCGCTaGCACCTTCTGGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFALMVR*HLLVFR
Trigger: TCTGAAAACCAGAAGGTGGCAGCGCACCATAAGTGC...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAATATGCTCTTCTCTCTaGCCAGAATACCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLICSSL*PEYLPQ
Trigger: TTGGGGGAGGTATTCTGGGCAGAGAGAAGAGCATAT...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTATCGCCCAGGCTGGAGTaGAGTGGGGCGATCTCGAAG +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVSPRLE*SGAISK
Trigger: CTTCGAGATCGCCCCACTGCACTCCAGCCTGGGCGA...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTTTCTCCAGCAGTGCCTaGGAGCGGGGCTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: IHRVNSVSIASQKLQTIAFSSSA*ERGSVA
Trigger: GGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAA...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAACACAACAGGGCACTTaGGAGGAACAGGTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTTQQGT*EEQVSD
Trigger: GTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGT...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACACCCTCCCCTTGGTACTaGGGTGCTATGGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTPSPWY*GAMVVS
Trigger: TGATACTACCATAGCACCTCAGTACCAAGGGGAGGG...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGACTTCTGACCTCAGGTaGTTCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWTSDLR*FTRLGL
Trigger: GAGGCCGAGGCGGGTGAATCACCTGAGGTCAGAAGT...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAGGCAGGGAGAACGCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKGRENA*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGCGTTCTCCCTGCC...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTATCGGTTCTCCAGCAGTaGCTGAGAGCGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVSVLQQ*LRAGLC
Trigger: ACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGA...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCAGTTGCCTGAGTCCATaGTGGTCAGTGAGAACAACT +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFSCLSP*WSVRTT
Trigger: AGTTGTTCTCACTGACCAGCATGGACTCAGGCAACT...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCAGGGCTGCTTCTGTGTaGAGACCTATCTCTATAGGA +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFRAASV*RPISIG
Trigger: TCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCT...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCTGGCAGAAAAAGGGCTaGAGAAACCCATACAAAGTC +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFWQKKG*RNPYKV
Trigger: GACTTTGTATGGGTTTCTTCAGCCCTTTTTCTGCCA...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTTCGGTTCTCCAGCAGTaGCTGAGAGCGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILSVLQQ*LRAGLC
Trigger: ACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGA...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCCTTATCATTACCAGTTaGCTGAGTCCATGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFLIITS*LSPCWS
Trigger: TGACCAGCATGGACTCAGGCAACTGGTAATGATAAG...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp ATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAACTAATATTGGACAGCTTCAAGCACAATaGCTGGCACATAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MPSFKHNGWHIGSLTNIGQLQAQ*LAHRKP
Trigger: AGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTG...TCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAGGCAATCCTCCAGTCTaGGCCTCCTGTATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVGNPPV*ASCIAG
Trigger: CCCAGCTATACAGGAGGCCCAGACTGGAGGATTGCC...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTCTCTTGATGTTGTTGTaGGCTGGACTGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVILLMLL*AGLCQK
Trigger: CTTCTGGCACAGTCCAGCTCACAACAACATCAAGAG...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCACACAACAGGGCACTTaGGAGGAACAGGTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCTQQGT*EEQVSD
Trigger: GTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGT...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACACCAATCACACCACAGTaGGAAAAACAGGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTPITPQ*EKQVVS
Trigger: GCTGACTACCTGTTTTTCTCACTGTGGTGTGATTGG...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTTCGGTTCTCCAGCAGTaGCTGAGAGCGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IHRVNSVSIASQKLQTIASVLQQ*LRAGLC
Trigger: ACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGA...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACGGCCCAGAGGCGGACTaGAGGAGAGAAGCGCCAATG +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNGPEAD*RREAPM
Trigger: CATTGGCGCTTCTCTCCTGCAGTCCGCCTCTGGGCC...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTATTAAGTCTCAAGAAATaGGGCAGGGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVLSLKK*GRAQRR
Trigger: CCGCCTCTGGGCCCTGCCGCATTTCTTGAGACTTAA...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTTTAAGTCTCAAGAAATaGGGCAGGGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCALSLKK*GRAQRR
Trigger: CCGCCTCTGGGCCCTGCCGCATTTCTTGAGACTTAA...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTCCCTTGGTACTGAGGTaGTATGGTAGTATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIPLVLR*YGSIRQ
Trigger: CTGCCTGATACTACCATAGCACCTCAGTACCAAGGG...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTACTCACCCGGGGCTCTTaGATATGCTCTTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVLTRGS*ICSSLC
Trigger: GCAGAGAGAAGAGCATATGCAAGAGCCCCGGGTGAG...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAGGGCGATCTCGAAGCTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKGRSRS*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGCTTCGAGATCGCCC...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370799.5
3UTR CAA 72 bp TCTGCCCAGAATACCTCCCCCAACCAAGGCTCACCTTaGTCCTTAATATCTCAGCTTAAAGCTGAGCACTAT +
Preference number: 4 (lower is better)
Translates to: SAQNTSPNQGSP*SLISQLKAEHY
Trigger: ATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGAGCCTTGGTTGGGGGAGGTATTCTGGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATCTGTGCGCCAATATGTaGAGTGTTCCACACAACAGG +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHLCANM*SVPHNR
Trigger: CCTGTTGTGTGGAACACTTCACATATTGGCGCACAG...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAGTAGTTGTCCAAAAATaGAGGAGCTCTGTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTVVVQK*RSSVVP
Trigger: TGGGACAACAGAGCTCCTTCATTTTTGGACAACTAC...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTCCACAAATTACCATGTaGTGCCACCAGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIPQITM*CHQWHV
Trigger: AACATGCCACTGGTGGCAGCACATGGTAATTTGTGG...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGTTGCTCAGGCTGGAGTaGAATGGCGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWLLRLE*NGAILA
Trigger: AGCCAAGATTGCGCCATTGCACTCCAGCCTGAGCAA...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGGGGGAGTCAGAAAAGTaGATGGTTTGGGCACCAACC +
Preference number: 4 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWGESEK*MVWAPT
Trigger: GGTTGGTGCCCAAACCATGCACTTTTCTGACTCCCC...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAGGGAGGATGTGGACCTaGTATCTTCTGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKGRMWT*YLLTAL
Trigger: AAGGGCTGTCAGAAGATACCAGGTCCACATCCTCCC...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTTTCCATGGGAGGATGTaGACCTGGTATCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIFHGRM*TWYLLT
Trigger: TGTCAGAAGATACCAGGTCCACATCCTCCCATGGAA...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTAGGGCTGCTTCTGTGTaGAGACCTATCTCTATAGGA +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIRAASV*RPISIG
Trigger: TCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCT...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp ATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAACTAATATTGGAGATGTTGTTGTGAGCTaGACTGTGCCAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: MPSFKHNGWHIGSLTNIGDVVVS*TVPEEN
Trigger: GTTTTCTTCTGGCACAGTCCAGCTCACAACAACATC...TCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACATGCCTGAGTCCATGCTaGTCAGTGAGAACAACTTTA +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTCLSPC*SVRTTL
Trigger: TAAAGTTGTTCTCACTGACCAGCATGGACTCAGGCA...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTAGCTCTGTTGTCCCATaGGTAAGTCTATGGCACACA +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVISSVVP*VSLWHT
Trigger: TGTGTGCCATAGACTTACCCATGGGACAACAGAGCT...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCGGTAAAGTGCTATTCTaGTTGCTAGTGGCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFGKVLF*LLVAEK
Trigger: TTTTTCTGCCACTAGCAACCAGAATAGCACTTTACC...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 72 bp GCAAAAGCACTGGAGCTCATAGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTCAGTGAGAACAACTTT +
Preference number: 4 (lower is better)
Translates to: AKALELIAYHYQ*PESMLVSENNF
Trigger: AAAGTTGTTCTCACTGACCAGCATGGACTCAGGCAACTGGTAATGATAAGCTATGAGCTCCAGTGCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTTCCAAATTCTGCTCTTaGTGTTGTTGTGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVISKFCS*CCCELD
Trigger: GTCCAGCTCACAACAACATCAAGAGCAGAATTTGGA...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTACACAACAGGGCACTTaGGAGGAACAGGTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILTQQGT*EEQVSD
Trigger: GTCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGT...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCTGTGCGCCAATATGTaGAGTGTTCCACACAACAGG +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCALCANM*SVPHNR
Trigger: CCTGTTGTGTGGAACACTTCACATATTGGCGCACAG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTACTCCTACAGCACATaGGACCTCCTTACGTACTGT +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCYSYST*DLLTYC
Trigger: ACAGTACGTAAGGAGGTCTCATGTGCTGTAGGAGTA...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTCCCTCCCCTTGGTACTaGGGTGCTATGGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSPSPWY*GAMVVS
Trigger: TGATACTACCATAGCACCTCAGTACCAAGGGGAGGG...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAGCACTTATGGTGCGCTaGCACCTTCTGGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVALMVR*HLLVFR
Trigger: TCTGAAAACCAGAAGGTGGCAGCGCACCATAAGTGC...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAAGCACTTATGGTGCGCTaGCACCTTCTGGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKALMVR*HLLVFR
Trigger: TCTGAAAACCAGAAGGTGGCAGCGCACCATAAGTGC...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATAGTTGCCTGAGTCCATaGTGGTCAGTGAGAACAACT +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHSCLSP*WSVRTT
Trigger: AGTTGTTCTCACTGACCAGCATGGACTCAGGCAACT...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTGAAAGAGAGGAGGTGTaGTGTCAAGAGAATTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIEREEV*CQENFG
Trigger: GCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTC...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAACCCTTGGTACTGAGGTaGTATGGTAGTATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKPLVLR*YGSIRQ
Trigger: CTGCCTGATACTACCATAGCACCTCAGTACCAAGGG...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATCGGGGCTCTTGCATATaGTCTTCTCTCTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHRGSCI*SSLCPE
Trigger: TTCTGGGCAGAGAGAAGAGCATATGCAAGAGCCCCG...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTCTCTTGATGTTGTTGTaGGCTGGACTGTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILLLMLL*AGLCQK
Trigger: CTTCTGGCACAGTCCAGCTCACAACAACATCAAGAG...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATGTAGTTGTCCAAAAATaGAGGAGCTCTGTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHVVVQK*RSSVVP
Trigger: TGGGACAACAGAGCTCCTTCATTTTTGGACAACTAC...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTATTATTGACTGGCCATaGTTACCCCCGGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISIIDWP*LPPAPS
Trigger: GGAAGGTGCCGGGGGTAATCATGGCCAGTCAATAAT...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCCAATCACACCACAGTaGGAAAAACAGGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAPITPQ*EKQVVS
Trigger: GCTGACTACCTGTTTTTCTCACTGTGGTGTGATTGG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACTTAAGTCTCAAGAAATaGGGCAGGGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNLSLKK*GRAQRR
Trigger: CCGCCTCTGGGCCCTGCCGCATTTCTTGAGACTTAA...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTGCACTTATGGTGCGCTaGCACCTTCTGGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSALMVR*HLLVFR
Trigger: TCTGAAAACCAGAAGGTGGCAGCGCACCATAAGTGC...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTATCACAACCAATTGTTaGTCCAGGACAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIITTNC*SRTMAQ
Trigger: TTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGAT...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCGAGATTTTTAGCATGTaGTGTCAAAGTCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: APICEVFHTTGHLRGTGFEIFSM*CQSQEK
Trigger: TTTCTCTTGACTTTGACAGCACATGCTAAAAATCTC...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp ATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAACTAATATTGGAAAGTTTTCCATCTCTTaGTATGTGCTGGACCTCTTA +
Preference number: 4 (lower is better)
Translates to: MPSFKHNGWHIGSLTNIGKFSIS*YVLDLL
Trigger: TAAGAGGTCCAGCACATAGCAAGAGATGGAAAACTT...TCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTGGGAGGATGTGGACCTaGTATCTTCTGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: IHRVNSVSIASQKLQTIAGRMWT*YLLTAL
Trigger: AAGGGCTGTCAGAAGATACCAGGTCCACATCCTCCC...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTTTCCATGGGAGGATGTaGACCTGGTATCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAFHGRM*TWYLLT
Trigger: TGTCAGAAGATACCAGGTCCACATCCTCCCATGGAA...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCATTTCATCTGTTCCATaGGAGGATGTGGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCISSVP*EDVDLV
Trigger: TACCAGGTCCACATCCTCCCATGGAACAGATGAAAT...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAAGGGCTGCTTCTGTGTaGAGACCTATCTCTATAGGA +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKRAASV*RPISIG
Trigger: TCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCT...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCAACAGGTTTCGGACATaGTGTCTGAAGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCNRFRT*CLKSLA
Trigger: TGCTAAGGACTTCAGACACCATGTCCGAAACCTGTT...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTATCTGAGGCTCACTCCTaGTTAAGAACCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVSEAHS*LRTIAP
Trigger: AGGAGCAATGGTTCTTAACCAGGAGTGAGCCTCAGA...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAAGTCAGAAAAGTGCATaGTTTGGGCACCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKSQKSA*FGHQPR
Trigger: TCTGGGTTGGTGCCCAAACCATGCACTTTTCTGACT...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAATCCAAATTCTGCTCTTaGTGTTGTTGTGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKSKFCS*CCCELD
Trigger: GTCCAGCTCACAACAACATCAAGAGCAGAATTTGGA...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTC +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVIVAPG*LQSVHF
Trigger: GAAATGTACACTTTGCAGTCAGCCTGGTGCTACTAT...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTTACTCCTACAGCACATaGGACCTCCTTACGTACTGT +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSYSYST*DLLTYC
Trigger: ACAGTACGTAAGGAGGTCTCATGTGCTGTAGGAGTA...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGTACTCCTACAGCACATaGGACCTCCTTACGTACTGT +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEYSYST*DLLTYC
Trigger: ACAGTACGTAAGGAGGTCTCATGTGCTGTAGGAGTA...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACCCCTCCCCTTGGTACTaGGGTGCTATGGTAGTATCA +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNPSPWY*GAMVVS
Trigger: TGATACTACCATAGCACCTCAGTACCAAGGGGAGGG...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTAGTTGTCCAAAAATaGAGGAGCTCTGTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAVVVQK*RSSVVP
Trigger: TGGGACAACAGAGCTCCTTCATTTTTGGACAACTAC...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp ATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAACTAATATTGGACTTATAATGGGCAGCTaGCTTCTTGGCATTAAATAT +
Preference number: 4 (lower is better)
Translates to: MPSFKHNGWHIGSLTNIGLIMGS*LLGIKY
Trigger: ATATTTAATGCCAAGAAGGCAGCTGCCCATTATAAG...TCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACACTTATAATGGGCAGCTaGCTTCTTGGCATTAAATAT +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTLIMGS*LLGIKY
Trigger: ATATTTAATGCCAAGAAGGCAGCTGCCCATTATAAG...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTCCACAAATTACCATGTaGTGCCACCAGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILPQITM*CHQWHV
Trigger: AACATGCCACTGGTGGCAGCACATGGTAATTTGTGG...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTAGTTGCCTGAGTCCATaGTGGTCAGTGAGAACAACT +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSSCLSP*WSVRTT
Trigger: AGTTGTTCTCACTGACCAGCATGGACTCAGGCAACT...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAAGAAAGAGAGGAGGTGTaGTGTCAAGAGAATTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKEREEV*CQENFG
Trigger: GCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTC...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGCGCTGCCACCTTCTaGTTTTCAGATATTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCCAATF*FSDISN
Trigger: GTTACTAATATCTGAAAACCAGAAGGTGGCAGCGCA...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTGTTGCTCCAGGACAATaGCACAAAGAACACATCAGC +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILVAPGQ*HKEHIS
Trigger: GCTGATGTGTTCTTTGTGCCATTGTCCTGGAGCAAC...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAAGGGAGGATGTGGACCTaGTATCTTCTGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKGRMWT*YLLTAL
Trigger: AAGGGCTGTCAGAAGATACCAGGTCCACATCCTCCC...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACGGGAGGATGTGGACCTaGTATCTTCTGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNGRMWT*YLLTAL
Trigger: AAGGGCTGTCAGAAGATACCAGGTCCACATCCTCCC...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATTTCCATGGGAGGATGTaGACCTGGTATCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHFHGRM*TWYLLT
Trigger: TGTCAGAAGATACCAGGTCCACATCCTCCCATGGAA...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTATTTCATCTGTTCCATaGGAGGATGTGGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAISSVP*EDVDLV
Trigger: TACCAGGTCCACATCCTCCCATGGAACAGATGAAAT...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAAGATGTTGTTGTGAGCTaGACTGTGCCAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKDVVVS*TVPEEN
Trigger: GTTTTCTTCTGGCACAGTCCAGCTCACAACAACATC...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATCTGTCAAGAGAATTTTaGCAAAAGCACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHLSREF*QKHWSS
Trigger: TGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAG...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTAACAGGTTTCGGACATaGTGTCTGAAGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCANRFRT*CLKSLA
Trigger: TGCTAAGGACTTCAGACACCATGTCCGAAACCTGTT...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTAGCTCTGTTGTCCCATaGGTAAGTCTATGGCACACA +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILSSVVP*VSLWHT
Trigger: TGTGTGCCATAGACTTACCCATGGGACAACAGAGCT...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTAGCTCTGTTGTCCCATaGGTAAGTCTATGGCACACA +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSSSVVP*VSLWHT
Trigger: TGTGTGCCATAGACTTACCCATGGGACAACAGAGCT...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTGGTAAAGTGCTATTCTaGTTGCTAGTGGCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIGKVLF*LLVAEK
Trigger: TTTTTCTGCCACTAGCAACCAGAATAGCACTTTACC...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGTCCAAATTCTGCTCTTaGTGTTGTTGTGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQESKFCS*CCCELD
Trigger: GTCCAGCTCACAACAACATCAAGAGCAGAATTTGGA...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTC +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILIVAPG*LQSVHF
Trigger: GAAATGTACACTTTGCAGTCAGCCTGGTGCTACTAT...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGTGGCAGAAAAAGGGCTaGAGAAACCCATACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEWQKKG*RNPYKV
Trigger: GACTTTGTATGGGTTTCTTCAGCCCTTTTTCTGCCA...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTCAAGTACACAGATTCTaGTTCAATAGCAGATCTACA +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIQVHRF*FNSRST
Trigger: TGTAGATCTGCTATTGAATCAGAATCTGTGTACTTG...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATACCCAAATGACTTGGTaGCTGCTTGTGTACATTGTC +
Preference number: 4 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHTQMTW*LLVYIV
Trigger: GACAATGTACACAAGCAGTCACCAAGTCATTTGGGT...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAATCACAACCAATTGTTaGTCCAGGACAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVITTNC*SRTMAQ
Trigger: TTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGAT...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACATTTCAGGCTAAAATATaGATAAAAGACAGTAACGGC +
Preference number: 4 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTFQAKI*IKDSNG
Trigger: GCCGTTACTGTCTTTTATGCATATTTTAGCCTGAAA...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACGTGAGAGTAAGGAAGTaGTTTACAACTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNVRVRK*FTTLDG
Trigger: GCCATCCAGAGTTGTAAAGCACTTCCTTACTCTCAC...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAATGCGCTGCCACCTTCTaGTTTTCAGATATTAGTAAC +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKCAATF*FSDISN
Trigger: GTTACTAATATCTGAAAACCAGAAGGTGGCAGCGCA...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATATTTCATCTGTTCCATaGGAGGATGTGGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHISSVP*EDVDLV
Trigger: TACCAGGTCCACATCCTCCCATGGAACAGATGAAAT...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTAGGGCTGCTTCTGTGTaGAGACCTATCTCTATAGGA +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISRAASV*RPISIG
Trigger: TCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCT...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTAACAGGTTTCGGACATaGTGTCTGAAGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILNRFRT*CLKSLA
Trigger: TGCTAAGGACTTCAGACACCATGTCCGAAACCTGTT...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCGCTTCAGCAGGTAAGTaGAAGAAAATATCACTACCT +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCASAGK*KKISLP
Trigger: AGGTAGTGATATTTTCTTCCACTTACCTGCTGAAGC...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATGGTAAAGTGCTATTCTaGTTGCTAGTGGCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHGKVLF*LLVAEK
Trigger: TTTTTCTGCCACTAGCAACCAGAATAGCACTTTACC...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp ATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAACTAATATTGGACTTTACAACTCTGGATaGCAAATCAAAACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: MPSFKHNGWHIGSLTNIGLYNSG*QIKTSR
Trigger: TCTTGAAGTTTTGATTTGCCATCCAGAGTTGTAAAG...TCCAATATTAGTTAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACCGTGAGTCAATGCACTaGGCCTCTTTCTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNRESMH*ASFFLS
Trigger: AGACAAAAAGAAAGAGGCCCAGTGCATTGACTCACG...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGGTTTCTCTCGTATTTaGGCTTTATCATGCAATGCA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAGFSRI*ALSCNA
Trigger: TGCATTGCATGATAAAGCTCAAATACGAGAGAAACC...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTATAGTAGCACCAGGCTaGCTGCAAAGTGTACATTTC +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISIVAPG*LQSVHF
Trigger: GAAATGTACACTTTGCAGTCAGCCTGGTGCTACTAT...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTTGGCAGAAAAAGGGCTaGAGAAACCCATACAAAGTC +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISWQKKG*RNPYKV
Trigger: GACTTTGTATGGGTTTCTTCAGCCCTTTTTCTGCCA...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACCCAATCACACCACAGTaGGAAAAACAGGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNPITPQ*EKQVVS
Trigger: GCTGACTACCTGTTTTTCTCACTGTGGTGTGATTGG...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATCAAGTACACAGATTCTaGTTCAATAGCAGATCTACA +
Preference number: 4 (lower is better)
Translates to: RCAVKRILAKALELIAYHQVHRF*FNSRST
Trigger: TGTAGATCTGCTATTGAATCAGAATCTGTGTACTTG...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTATCACAACCAATTGTTaGTCCAGGACAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILITTNC*SRTMAQ
Trigger: TTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGAT...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTAGCTTCGGAGTTATGTaGAGTTTTCTTGTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCASFGVM*SFLVFS
Trigger: CGAAAACACAAGAAAACTGCACATAACTCCGAAGCT...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332070.7
ENST00000370803.8
CDS-3UTR GCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCCTTATAATGGGCAGCTaGCTTCTTGGCATTAAATAT +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCLIMGS*LLGIKY
Trigger: ATATTTAATGCCAAGAAGGCAGCTGCCCATTATAAG...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCAGAAGAAAACAACATaGACTTATAATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAQKKTT*TYNGQL
Trigger: CAGCTGCCCATTATAAGTGCATGTTGTTTTCTTCTG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAACCACAAATTACCATGTaGTGCCACCAGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKPQITM*CHQWHV
Trigger: AACATGCCACTGGTGGCAGCACATGGTAATTTGTGG...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTCTTATCATTACCAGTTaGCTGAGTCCATGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISLIITS*LSPCWS
Trigger: TGACCAGCATGGACTCAGGCAACTGGTAATGATAAG...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTTTTGCCATAAAGAAATaGATAAATGTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIFAIKK*INVLQQ
Trigger: CTGCTGAAGCACATTTATGCATTTCTTTATGGCAAA...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTTGCTGCTCTATCAGCTaGAGAATATCTCAATGTACA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCACCSIS*RISQCT
Trigger: TGTACATTGAGATATTCTGCAGCTGATAGAGCAGCA...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACTTCCATGGGAGGATGTaGACCTGGTATCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNFHGRM*TWYLLT
Trigger: TGTCAGAAGATACCAGGTCCACATCCTCCCATGGAA...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTGATGTTGTTGTGAGCTaGACTGTGCCAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IHRVNSVSIASQKLQTIADVVVS*TVPEEN
Trigger: GTTTTCTTCTGGCACAGTCCAGCTCACAACAACATC...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTGATGTTGTTGTGAGCTaGACTGTGCCAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISDVVVS*TVPEEN
Trigger: GTTTTCTTCTGGCACAGTCCAGCTCACAACAACATC...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTTGCCTGAGTCCATGCTaGTCAGTGAGAACAACTTTA +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISCLSPC*SVRTTL
Trigger: TAAAGTTGTTCTCACTGACCAGCATGGACTCAGGCA...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTCTGTCAAGAGAATTTTaGCAAAAGCACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSLSREF*QKHWSS
Trigger: TGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAG...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGCTGTCAAGAGAATTTTaGCAAAAGCACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQELSREF*QKHWSS
Trigger: TGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAG...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGGTCCTTTGTATAACATaGAAAGAGAGGAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEVLCIT*KERRCA
Trigger: AGCACACCTCCTCTCTTTCCATGTTATACAAAGGAC...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTGTCCTTTGTATAACATaGAAAGAGAGGAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILVLCIT*KERRCA
Trigger: AGCACACCTCCTCTCTTTCCATGTTATACAAAGGAC...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 72 bp TTACACAGAATACTAGACCCGGAAGTCATTGGTTTATaGCATTCTAGGCATGTGAGAGTAAGGAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LHRILDPEVIGL*HSRHVRVRKCF
Trigger: AAAGCACTTCCTTACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCATGTAAATTCCTTGTaGAGGTTTCTCTCGTATTTG +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAHVNSL*RFLSYL
Trigger: CAAATACGAGAGAAACCTTCACAAGGAATTTACATG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAACATGTAAATTCCTTGTaGAGGTTTCTCTCGTATTTG +
Preference number: 4 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKHVNSL*RFLSYL
Trigger: CAAATACGAGAGAAACCTTCACAAGGAATTTACATG...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACTCCAAATTCTGCTCTTaGTGTTGTTGTGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNSKFCS*CCCELD
Trigger: GTCCAGCTCACAACAACATCAAGAGCAGAATTTGGA...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATCTAACTCTGTCCCATaGACCTGTTTAAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKSNSVP*TCLKDD
Trigger: ATCATCTTTTAAACAGGTTCATGGGACAGAGTTAGA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332070.7
CDS-3UTR TCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCATGAGAGGAATGTTTaGTTTTTGACCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAHERNV*FLTHNA
Trigger: TGCATTATGGGTCAAAAATCAAACATTCCTCTCATG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGCTAATATTGGATGGATaGATGCTAATCCAGGGATAT +
Preference number: 4 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWLILDG*MLIQGY
Trigger: ATATCCCTGGATTAGCATTCATCCATCCAATATTAG...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAACTTATAATGGGCAGCTaGCTTCTTGGCATTAAATAT +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKLIMGS*LLGIKY
Trigger: ATATTTAATGCCAAGAAGGCAGCTGCCCATTATAAG...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATCAGAAGAAAACAACATaGACTTATAATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHQKKTT*TYNGQL
Trigger: CAGCTGCCCATTATAAGTGCATGTTGTTTTCTTCTG...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR GCA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCACCAGTGGCATGTTTaGATTGTAAAGGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: SIILPEVLCITWKERRCAHQWHV*IVKENL
Trigger: CAAATTTTCCTTTACAATGCAAACATGCCACTGGTG...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCGAGATTTTTAGCATGTaGTGTCAAAGTCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LNHFARSPLYNMEREEVCEIFSM*CQSQEK
Trigger: TTTCTCTTGACTTTGACAGCACATGCTAAAAATCTC...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTTGCTGCTCTATCAGCTaGAGAATATCTCAATGTACA +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILCCSIS*RISQCT
Trigger: TGTACATTGAGATATTCTGCAGCTGATAGAGCAGCA...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGTGCTGCTCTATCAGCTaGAGAATATCTCAATGTACA +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQECCSIS*RISQCT
Trigger: TGTACATTGAGATATTCTGCAGCTGATAGAGCAGCA...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACCTCAAGAGAATCTTTTaGCTTCTGTCTACCATATCC +
Preference number: 4 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNLKRIF*LLSTIS
Trigger: GGATATGGTAGACAGAAGGCAAAAGATTCTCTTGAG...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTATTTCATCTGTTCCATaGGAGGATGTGGACCTGGTA +
Preference number: 4 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCISSVP*EDVDLV
Trigger: TACCAGGTCCACATCCTCCCATGGAACAGATGAAAT...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTGCTTCAGCAGGTAAGTaGAAGAAAATATCACTACCT +
Preference number: 4 (lower is better)
Translates to: AGKWKKISLPRNASVKILASAGK*KKISLP
Trigger: AGGTAGTGATATTTTCTTCCACTTACCTGCTGAAGC...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATAACATAAGAATCACCTaGGGAGTCAGAAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHNIRIT*GVRKVH
Trigger: ATGCACTTTTCTGACTCCCCAGGTGATTCTTATGTT...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CCA 90 bp AGAATACTAGACCCGGAAGTCATTGGTTTATTGCATTCTAGGCATGTGAGAGTAGTGTGCCACTTTGCCTaGCTAATTTTTAAATGTTGT +
Preference number: 4 (lower is better)
Translates to: RILDPEVIGLLHSRHVRVVCHFA*LIFKCC
Trigger: ACAACATTTAAAAATTAGCCAGGCAAAGTGGCACAC...TACTCTCACATGCCTAGAATGCAATAAACCAATGACTTCCGGGTCTAGTATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR TCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGCATGTAAATTCCTTGTaGAGGTTTCTCTCGTATTTG +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEHVNSL*RFLSYL
Trigger: CAAATACGAGAGAAACCTTCACAAGGAATTTACATG...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTCCTTTATATAATTATTaGCTGGCCATGATTACCCCC +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISPLYNY*LAMITP
Trigger: GGGGGTAATCATGGCCAGTCAATAATTATATAAAGG...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAAATCACAACCAATTGTTaGTCCAGGACAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKITTNC*SRTMAQ
Trigger: TTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGAT...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTAGCTTCGGAGTTATGTaGAGTTTTCTTGTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISSFGVM*SFLVFS
Trigger: CGAAAACACAAGAAAACTGCACATAACTCCGAAGCT...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332070.7
ENST00000370803.8
CDS-3UTR GCA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATTTGCCATAAAGAAATaGATAAATGTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLYNMEREEVCCQENFGKFAIKK*INVLQQ
Trigger: CTGCTGAAGCACATTTATGCATTTCTTTATGGCAAA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACTGCGCTGCCACCTTCTaGTTTTCAGATATTAGTAAC +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNCAATF*FSDISN
Trigger: GTTACTAATATCTGAAAACCAGAAGGTGGCAGCGCA...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAATGCGCTGCCACCTTCTaGTTTTCAGATATTAGTAAC +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKCAATF*FSDISN
Trigger: GTTACTAATATCTGAAAACCAGAAGGTGGCAGCGCA...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGGATGATGATGCTACTTaGGAACATAAGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEDDDAT*EHKYCT
Trigger: TGTACAGTACTTATGTTCCCAAGTAGCATCATCATC...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 72 bp GAGTCCCTTGATTTAAGTAAATGTGTGAATACACACTaGACAAACGTGATCTTAAGGGACTCGCAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ESLDLSKCVNTH*TNVILRDSQFK
Trigger: TTTAAACTGCGAGTCCCTTAAGATCACGTTTGTCAAGTGTGTATTCACACATTTACTTAAATCAAGGGACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TACCACAATGTAATTACTACCCAGAAGATGATGATGCTACTTGGGAACATAAGTGTGTGTATTGTATCCTaGCAACAGATCCCATATAAT +
Preference number: 4 (lower is better)
Translates to: YHNVITTQKMMMLLGNISVCIVS*QQIPYN
Trigger: ATTATATGGGATCTGTTGTCAGGATACAATACACAC...ACTTATGTTCCCAAGTAGCATCATCATCTTCTGGGTAGTAATTACATTGTGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332070.7
CDS-3UTR TCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAACCTTTATATAATTATTaGCTGGCCATGATTACCCCC +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKPLYNY*LAMITP
Trigger: GGGGGTAATCATGGCCAGTCAATAATTATATAAAGG...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAACAGAAGAAAACAACATaGACTTATAATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKQKKTT*TYNGQL
Trigger: CAGCTGCCCATTATAAGTGCATGTTGTTTTCTTCTG...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACCAGAAGAAAACAACATaGACTTATAATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNQKKTT*TYNGQL
Trigger: CAGCTGCCCATTATAAGTGCATGTTGTTTTCTTCTG...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGGAGATTTTTAGCATGTaGTGTCAAAGTCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEEIFSM*CQSQEK
Trigger: TTTCTCTTGACTTTGACAGCACATGCTAAAAATCTC...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTTTTCAGGCTAAAATATaGATAAAAGACAGTAACGGC +
Preference number: 4 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSFQAKI*IKDSNG
Trigger: GCCGTTACTGTCTTTTATGCATATTTTAGCCTGAAA...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACCATGTAAATTCCTTGTaGAGGTTTCTCTCGTATTTG +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNHVNSL*RFLSYL
Trigger: CAAATACGAGAGAAACCTTCACAAGGAATTTACATG...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAACATGAGAGGAATGTTTaGTTTTTGACCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKHERNV*FLTHNA
Trigger: TGCATTATGGGTCAAAAATCAAACATTCCTCTCATG...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR TCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTCATGAGAGGAATGTTTaGTTTTTGACCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCHERNV*FLTHNA
Trigger: TGCATTATGGGTCAAAAATCAAACATTCCTCTCATG...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAACACCAGTGGCATGTTTaGATTGTAAAGGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKHQWHV*IVKENL
Trigger: CAAATTTTCCTTTACAATGCAAACATGCCACTGGTG...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACCACCAGTGGCATGTTTaGATTGTAAAGGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNHQWHV*IVKENL
Trigger: CAAATTTTCCTTTACAATGCAAACATGCCACTGGTG...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAAGATGATGATGCTACTTaGGAACATAAGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKDDDAT*EHKYCT
Trigger: TGTACAGTACTTATGTTCCCAAGTAGCATCATCATC...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
3UTR CAA 72 bp ACGTTTAATTTGCTGTTGCCAAATGTTAGTTTAAACTaGAAGGACTCAATCATTTTGCCAGAAGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TFNLLLPNVSLN*KDSIILPEVLC
Trigger: ACAAAGGACTTCTGGCAAAATGATTGAGTCCTTCAAGTTTAAACTAACATTTGGCAACAGCAAATTAAACGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAATTTGCCATAAAGAAATaGATAAATGTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKFAIKK*INVLQQ
Trigger: CTGCTGAAGCACATTTATGCATTTCTTTATGGCAAA...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR GCA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTTTTCAGGCTAAAATATaGATAAAAGACAGTAACGGC +
Preference number: 4 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCFQAKI*IKDSNG
Trigger: GCCGTTACTGTCTTTTATGCATATTTTAGCCTGAAA...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS GCA 90 bp CCAATGAGGGTAAAGAGAAAGAAGTCGGTCTCGGTTCTCCAGCAGTaGCTGAGAGCGGGGCTCTGTCGCCGGAGGTTGTTTCCTTTCATT +
Preference number: 5 (lower is better)
Translates to: PMRVKRKKSVSVLQQ*LRAGLCRRRLFPFI
Trigger: AATGAAAGGAAACAACCTCCGGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGAGACCGACTTCTTTCTCTTTACCCTCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAGAGAGTCTCGCTTTGTaGCCCACACTGATCTGGAAC +
Preference number: 5 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLESLAL*PTLIWN
Trigger: GTTCCAGATCAGTGTGGGCAACAAAGCGAGACTCTC...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCCACACAACAGGGCACTaGAGAGGAACAGGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: APICEVFHTTGHLRGTGFHTTGH*RGTGFG
Trigger: TCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTG...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAAACTCGGGAGGCTGAGTaGGGAGGATCACGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKTREAE*GGSREG
Trigger: GCCCTCACGTGATCCTCCCAACTCAGCCTCCCGAGT...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTACCAGTGTATGTAGTTTaGATCACTGGCATATGCCCA +
Preference number: 5 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLPVYVV*ITGICP
Trigger: TGGGCATATGCCAGTGATCAAAACTACATACACTGG...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTATTTATAAAAGTGAGATaGTGGCTGGGCATGGCTCAT +
Preference number: 5 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLFIKVR*WLGMAH
Trigger: ATGAGCCATGCCCAGCCACAATCTCACTTTTATAAA...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATCTCTGTCGCCGGAGGTaGTTTCCTTTCATTCGAGGA +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHLCRRR*FPFIRG
Trigger: TCCTCGAATGAAAGGAAACAACCTCCGGCGACAGAG...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAACTTGAGCCCAGGAGTTaGAGACCAGTCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGTCTCAAACTCCTGGGCTCAAG...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS GCA 90 bp GTAGTGGTATGTCCTGTGACATGTTTTCACATCACAACCAATTGTTaGTCCAGGACAATGGCACAAAGAACACATCAGCTTCGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: VVVCPVTCFHITTNC*SRTMAQRTHQLRAS
Trigger: AGAGGCACGAAGCTGATGTGTTCTTTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGAAAACATGTCACAGGACATACCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGCTCTGTCGCCGGAGGTaGTTTCCTTTCATTCGAGGA +
Preference number: 5 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWLCRRR*FPFIRG
Trigger: TCCTCGAATGAAAGGAAACAACCTCCGGCGACAGAG...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHAYHYQ*PESMLV
Trigger: GACCAGCATGGACTCAGGCAACTGGTAATGATAAGC...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAACACACAACAGGGCACTaGAGAGGAACAGGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKHTTGH*RGTGFG
Trigger: TCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTG...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCAAAATCCCTCCCCTaGGTACTGAGGTGCTATGGT +
Preference number: 5 (lower is better)
Translates to: LNHFARSPLYNMEREEVCSKSLP*VLRCYG
Trigger: ACCATAGCACCTCAGTACCAAGGGGAGGGATTTTGA...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCGCCAATATGTGAAGTGTTCCACACAACAGGGCACTTGAGAGGAACAGGTTTCTGTGTGAATACACACTaGACAAACGTGATCTTAAGG +
Preference number: 5 (lower is better)
Translates to: APICEVFHTTGHLRGTGFCVNTH*TNVILR
Trigger: CCTTAAGATCACGTTTGTCAAGTGTGTATTCACACA...GAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTGGAACACTTCACATATTGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAGACTGCTTGTGTACATaGTCTTTTACACAGAATACT +
Preference number: 5 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLDCLCT*SFTQNT
Trigger: AGTATTCTGTGTAAAAGACAATGTACACAAGCAGTC...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp GATCACTGGCATATGCCCAGCTTCAAGCACAATGGCTGGCACATAGGAAGCCTAGTATCTTTGTTAGGTTaGGTACCACAGTTATGTAAG +
Preference number: 5 (lower is better)
Translates to: DHWHMPSFKHNGWHIGSLVSLLG*VPQLCK
Trigger: CTTACATAACTGTGGTACCAAACCTAACAAAGATAC...TAGGCTTCCTATGTGCCAGCCATTGTGCTTGAAGCTGGGCATATGCCAGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTCTCTGTCGCCGGAGGTaGTTTCCTTTCATTCGAGGA +
Preference number: 5 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSLCRRR*FPFIRG
Trigger: TCCTCGAATGAAAGGAAACAACCTCCGGCGACAGAG...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTCACATCACAACCAATaGTTGCTCCAGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: LNHFARSPLYNMEREEVCSHHNQ*LLQDNG
Trigger: GCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGA...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTTGGGCAGCTGCCTTCTaGGCATTAAATATATGCAGT +
Preference number: 5 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVIWAAAF*ALNICS
Trigger: ACTGCATATATTTAATGCCAAGAAGGCAGCTGCCCA...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATGCTGTCAAGAGAATTTaGGCAAAAGCACTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHAVKRI*AKALEL
Trigger: GAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGC...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATCAAAATCCCTCCCCTaGGTACTGAGGTGCTATGGT +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKSKSLP*VLRCYG
Trigger: ACCATAGCACCTCAGTACCAAGGGGAGGGATTTTGA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTCTCTGTCGCCGGAGGTaGTTTCCTTTCATTCGAGGA +
Preference number: 5 (lower is better)
Translates to: IHRVNSVSIASQKLQTIALCRRR*FPFIRG
Trigger: TCCTCGAATGAAAGGAAACAACCTCCGGCGACAGAG...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AGGTTTCGGACATGGTGTCTGAAGTCCTTAGCAAGCGGTAACCCTTTCTTTACAGTATTTAGCTTTGTCTaGTACTCCACAGTGGTAATG +
Preference number: 5 (lower is better)
Translates to: RFRTWCLKSLASGNPFFTVFSFV*YSTVVM
Trigger: CATTACCACTGTGGAGTACAAGACAAAGCTAAATAC...TGTAAAGAAAGGGTTACCGCTTGCTAAGGACTTCAGACACCATGTCCGAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTC +
Preference number: 5 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEAYHYQ*PESMLV
Trigger: GACCAGCATGGACTCAGGCAACTGGTAATGATAAGC...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTTCACATCACAACCAATaGTTGCTCCAGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSSHHNQ*LLQDNG
Trigger: GCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGA...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATTCACATCACAACCAATaGTTGCTCCAGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHSHHNQ*LLQDNG
Trigger: GCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGA...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATGGGCAGCTGCCTTCTaGGCATTAAATATATGCAGT +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKWAAAF*ALNICS
Trigger: ACTGCATATATTTAATGCCAAGAAGGCAGCTGCCCA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTGCTGTCAAGAGAATTTaGGCAAAAGCACTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSAVKRI*AKALEL
Trigger: GAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGC...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACCACACAACAGGGCACTaGAGAGGAACAGGTTTCGGA +
Preference number: 5 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNHTTGH*RGTGFG
Trigger: TCCGAAACCTGTTCCTCTCAAGTGCCCTGTTGTGTG...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTAAAGTGCTATTCTGGTaGCTAGTGGCAGAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SIILPEVLCITWKERRCAKVLFW*LVAEKG
Trigger: CCCTTTTTCTGCCACTAGCAACCAGAATAGCACTTT...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACAGGCACCCAAATGACTaGGTGACTGCTTGTGTACAT +
Preference number: 5 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNRHPND*VTACVH
Trigger: ATGTACACAAGCAGTCACCAAGTCATTTGGGTGCCT...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS CCA 90 bp AAAGCAGATGAAAAGAGCATGCACTTATGGTGCGCTGCCACCTTCTaGTTTTCAGATATTAGTAACTGTCCACATTCCTTGTCTCTATTT +
Preference number: 5 (lower is better)
Translates to: KADEKSMHLWCAATF*FSDISNCPHSLSLF
Trigger: AAATAGAGACAAGGAATGTGGACAGTTACTAATATCTGAAAACCAGAAGGTGGCAGCGCACCATAAGTGCATGCTCTTTTCATCTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CCCTTGGTACTGAGGTGCTATGGTAGTATCAGGCAGACCACAACTAAAGTTATTAACTGTCCACATTCCTaGTCTCTATTTGACTTACAA +
Preference number: 5 (lower is better)
Translates to: PLVLRCYGSIRQTTTKVINCPHS*SLFDLQ
Trigger: TTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTT...AATAACTTTAGTTGTGGTCTGCCTGATACTACCATAGCACCTCAGTACCAAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATTGGGCAGCTGCCTTCTaGGCATTAAATATATGCAGT +
Preference number: 5 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHWAAAF*ALNICS
Trigger: ACTGCATATATTTAATGCCAAGAAGGCAGCTGCCCA...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATTCAATGTATTTAGCTTaGTCTTGTACTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHSMYLA*SCTPQW
Trigger: CCACTGTGGAGTACAAGACAAAGCTAAATACATTGA...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CTCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGCTTATGCTTTCCTTaGAGTATGGATCCACTAAAC +
Preference number: 5 (lower is better)
Translates to: LNHFARSPLYNMEREEVCCLCFP*SMDPLN
Trigger: GTTTAGTGGATCCATACTCAAAGGAAAGCATAAGCA...GCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATCCACCAGTGGCATGTTaGCATTGTAAAGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHPPVAC*HCKGKF
Trigger: AAATTTTCCTTTACAATGCAAACATGCCACTGGTGG...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACGCTTATCATTACCAGTaGCCTGAGTCCATGCTGGTC +
Preference number: 5 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNAYHYQ*PESMLV
Trigger: GACCAGCATGGACTCAGGCAACTGGTAATGATAAGC...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATTTTGCCAGAAGTCCTTaGTATAACATGGAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHFARSP*YNMERE
Trigger: CTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAA...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGAAAGTGCTATTCTGGTaGCTAGTGGCAGAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEKVLFW*LVAEKG
Trigger: CCCTTTTTCTGCCACTAGCAACCAGAATAGCACTTT...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS TCA 90 bp CTCCTGAAGTACAGTTTTAATATCAAAGTCTCCAAATTCTGCTCTTaGTGTTGTTGTGAGCTGGACTGTGCCAGAAGAAAACAACATGCA +
Preference number: 5 (lower is better)
Translates to: LLKYSFNIKVSKFCS*CCCELDCARRKQHA
Trigger: TGCATGTTGTTTTCTTCTGGCACAGTCCAGCTCACAACAACATCAAGAGCAGAATTTGGAGACTTTGATATTAAAACTGTACTTCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTTTACAAAAGCCACATTaGCGCTGTCTTGTAGGCCCT +
Preference number: 5 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCLQKPH*RCLVGP
Trigger: AGGGCCTACAAGACAGCGCAAATGTGGCTTTTGTAA...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AGGTGTGCTGTCAAGAGAATTTTGGCAAAAGCACTGGAGCTCATAGCTTATCATAACTGTCCACATTCCTaGTCTCTATTTGACTTACAA +
Preference number: 5 (lower is better)
Translates to: RCAVKRILAKALELIAYHNCPHS*SLFDLQ
Trigger: TTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTT...ATGATAAGCTATGAGCTCCAGTGCTTTTGCCAAAATTCTCTTGACAGCACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTTCACATCACAACCAATaGTTGCTCCAGGACAATGGC +
Preference number: 5 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCSHHNQ*LLQDNG
Trigger: GCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGA...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGGTATTTAGCTTTGTCTaGTACTCCACAGTGGTAATG +
Preference number: 5 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWVFSFV*YSTVVM
Trigger: CATTACCACTGTGGAGTACAAGACAAAGCTAAATAC...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATGCTTATGCTTTCCTTaGAGTATGGATCCACTAAAC +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKCLCFP*SMDPLN
Trigger: GTTTAGTGGATCCATACTCAAAGGAAAGCATAAGCA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAACCACCAGTGGCATGTTaGCATTGTAAAGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKPPVAC*HCKGKF
Trigger: AAATTTTCCTTTACAATGCAAACATGCCACTGGTGG...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATTTGCCAGAAGTCCTTaGTATAACATGGAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKFARSP*YNMERE
Trigger: CTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTTGTGTGAATACACACTaGACAAACGTGATCTTAAGG +
Preference number: 5 (lower is better)
Translates to: SIILPEVLCITWKERRCACVNTH*TNVILR
Trigger: CCTTAAGATCACGTTTGTCAAGTGTGTATTCACACA...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TGGCAAATTTTATTATACAGCATAGCGCCTTATGTAGGCACCCAAATGACTTGGGAAGTCATTGGTTTATaGCATTCTAGGCATGTGAGA +
Preference number: 5 (lower is better)
Translates to: WQILLYSIAPYVGTQMTWEVIGL*HSRHVR
Trigger: TCTCACATGCCTAGAATGCAATAAACCAATGACTTC...CCAAGTCATTTGGGTGCCTACATAAGGCGCTATGCTGTATAATAAAATTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp TCTAATGGTTCTCAATTAGAGGGGAACATAAGAATCACCTGGGGAGTCAGAAAATTTCTTGGCCTTCCTTaGCGACTTTTCTTTTTACTT +
Preference number: 5 (lower is better)
Translates to: SNGSQLEGNIRITWGVRKFLGLP*RLFFLL
Trigger: AAGTAAAAAGAAAAGTCGCAAAGGAAGGCCAAGAAA...TTTTCTGACTCCCCAGGTGATTCTTATGTTCCCCTCTAATTGAGAACCATTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp CCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGTCAAGAGAATTTTGGCAAATTTCTTGGCCTTCCTTaGCGACTTTTCTTTTTACTT +
Preference number: 5 (lower is better)
Translates to: PLYNMEREEVCCQENFGKFLGLP*RLFFLL
Trigger: AAGTAAAAAGAAAAGTCGCAAAGGAAGGCCAAGAAA...TTTGCCAAAATTCTCTTGACAGCACACCTCCTCTCTTTCCATGTTATACAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAATGGGCAGCTGCCTTCTaGGCATTAAATATATGCAGT +
Preference number: 5 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKWAAAF*ALNICS
Trigger: ACTGCATATATTTAATGCCAAGAAGGCAGCTGCCCA...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTGTATTTAGCTTTGTCTaGTACTCCACAGTGGTAATG +
Preference number: 5 (lower is better)
Translates to: AGKWKKISLPRNASVKILVFSFV*YSTVVM
Trigger: CATTACCACTGTGGAGTACAAGACAAAGCTAAATAC...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACTCAATGTATTTAGCTTaGTCTTGTACTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNSMYLA*SCTPQW
Trigger: CCACTGTGGAGTACAAGACAAAGCTAAATACATTGA...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTTCAATGTATTTAGCTTaGTCTTGTACTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSSMYLA*SCTPQW
Trigger: CCACTGTGGAGTACAAGACAAAGCTAAATACATTGA...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTTGCTTATGCTTTCCTTaGAGTATGGATCCACTAAAC +
Preference number: 5 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSCLCFP*SMDPLN
Trigger: GTTTAGTGGATCCATACTCAAAGGAAAGCATAAGCA...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTTTTGCCAGAAGTCCTTaGTATAACATGGAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: AGKWKKISLPRNASVKILFARSP*YNMERE
Trigger: CTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAA...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTTGTGTGAATACACACTaGACAAACGTGATCTTAAGG +
Preference number: 5 (lower is better)
Translates to: AGKWKKISLPRNASVKILCVNTH*TNVILR
Trigger: CCTTAAGATCACGTTTGTCAAGTGTGTATTCACACA...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCAATCATTTTGCCAGAAGTCCTTTGTATAACATGGAAAGAGAGGAGGTGTGCTGAGAAGTCACATAGCTaGGTAAACAAACATCTAGAT +
Preference number: 5 (lower is better)
Translates to: SIILPEVLCITWKERRCAEKSHS*VNKHLD
Trigger: ATCTAGATGTTTGTTTACCAAGCTATGTGACTTCTC...AGCACACCTCCTCTCTTTCCATGTTATACAAAGGACTTCTGGCAAAATGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACAAAGTGCTATTCTGGTaGCTAGTGGCAGAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNKVLFW*LVAEKG
Trigger: CCCTTTTTCTGCCACTAGCAACCAGAATAGCACTTT...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCACCTTTGTCCTTAATATCTCAGCTTAAAGCTGAGCACTATTTCCTTCAGAACTCTCAAGAGAATCTTTaGCCTTCTGTCTACCATATC +
Preference number: 5 (lower is better)
Translates to: SPLSLISQLKAEHYFLQNSQENL*PSVYHI
Trigger: GATATGGTAGACAGAAGGCAAAAGATTCTCTTGAGA...GTTCTGAAGGAAATAGTGCTCAGCTTTAAGCTGAGATATTAAGGACAAAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGAACTGTCCACATTCCTaGTCTCTATTTGACTTACAA +
Preference number: 5 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQENCPHS*SLFDLQ
Trigger: TTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTT...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp ACTTCAAGAGTCCCTACCAACTTATACTCCAGTCGATTAAACAAATGGAACCATAACTGTCCACATTCCTaGTCTCTATTTGACTTACAA +
Preference number: 5 (lower is better)
Translates to: TSRVPTNLYSSRLNKWNHNCPHS*SLFDLQ
Trigger: TTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTT...ATGGTTCCATTTGTTTAATCGACTGGAGTATAAGTTGGTAGGGACTCTTGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370799.5
CDS-3UTR CAA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTTTTCTTGGCCTTCCTTaGCGACTTTTCTTTTTACTT +
Preference number: 5 (lower is better)
Translates to: AGKWKKISLPRNASVKILFLGLP*RLFFLL
Trigger: AAGTAAAAAGAAAAGTCGCAAAGGAAGGCCAAGAAA...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCAGGTAAGTGGAAGAAAATATCACTACCTAGAAATGCCAGTGTGAAAATCCTTGAGAAGTCACATAGCTaGGTAAACAAACATCTAGAT +
Preference number: 5 (lower is better)
Translates to: AGKWKKISLPRNASVKILEKSHS*VNKHLD
Trigger: ATCTAGATGTTTGTTTACCAAGCTATGTGACTTCTC...AAGGATTTTCACACTGGCATTTCTAGGTAGTGATATTTTCTTCCACTTACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp AAACTCAGCCTTCTAGTGAGGGCTCATAAAACAAACAAGACATTTTTAGGCAGTATTTTTAATGCGAGATaGTTTAGCCAATCACACCAC +
Preference number: 5 (lower is better)
Translates to: KLSLLVRAHKTNKTFLGSIFNAR*FSQSHH
Trigger: GTGGTGTGATTGGCTAAACAATCTCGCATTAAAAAT...ACTGCCTAAAAATGTCTTGTTTGTTTTATGAGCCCTCACTAGAAGGCTGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GCTTTAGCATACTTCTTGGAAGAGATTTTTAGCATGTGCTGTCAAAGTCAAGAGATTTTTAATGCGAGATaGTTTAGCCAATCACACCAC +
Preference number: 5 (lower is better)
Translates to: ALAYFLEEIFSMCCQSQEIFNAR*FSQSHH
Trigger: GTGGTGTGATTGGCTAAACAATCTCGCATTAAAAAT...CTCTTGACTTTGACAGCACATGCTAAAAATCTCTTCCAAGAAGTATGCTAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTTTTCTTGGCCTTCCTTaGCGACTTTTCTTTTTACTT +
Preference number: 5 (lower is better)
Translates to: IHRVNSVSIASQKLQTIAFLGLP*RLFFLL
Trigger: AAGTAAAAAGAAAAGTCGCAAAGGAAGGCCAAGAAA...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp GGCAATAAATGCTCCAGAATAATCTTCAATATACGCTTGCAAAGATTACACTGTGTATTTAGCTTTGTCTaGTACTCCACAGTGGTAATG +
Preference number: 5 (lower is better)
Translates to: GNKCSRIIFNIRLQRLHCVFSFV*YSTVVM
Trigger: CATTACCACTGTGGAGTACAAGACAAAGCTAAATAC...ACAGTGTAATCTTTGCAAGCGTATATTGAAGATTATTCTGGAGCATTTATTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACTCAATGTATTTAGCTTaGTCTTGTACTCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNSMYLA*SCTPQW
Trigger: CCACTGTGGAGTACAAGACAAAGCTAAATACATTGA...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TCAAAAACAATTCTGACAATCGATAAAACACCACCAAGCCCTACAAGAAGAAAACCACCAGTGGCATGTTaGCATTGTAAAGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: SKTILTIDKTPPSPTRRKPPVAC*HCKGKF
Trigger: AAATTTTCCTTTACAATGCAAACATGCCACTGGTGG...TTTTCTTCTTGTAGGGCTTGGTGGTGTTTTATCGATTGTCAGAATTGTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp ATACACAGGGTTAATAGTGTTTCAATTGCTTCCCAGAAACTGCAAACTATAGCTGAGAAGTCACATAGCTaGGTAAACAAACATCTAGAT +
Preference number: 5 (lower is better)
Translates to: IHRVNSVSIASQKLQTIAEKSHS*VNKHLD
Trigger: ATCTAGATGTTTGTTTACCAAGCTATGTGACTTCTC...AGCTATAGTTTGCAGTTTCTGGGAAGCAATTGAAACACTATTAACCCTGTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS-3UTR CAA 90 bp TTTAAAATGCTGCTCTATCAGCTGCAGAATATCTCAATGTACAGTCAAGTTAACATTTTTAATGCGAGATaGTTTAGCCAATCACACCAC +
Preference number: 5 (lower is better)
Translates to: FKMLLYQLQNISMYSQVNIFNAR*FSQSHH
Trigger: GTGGTGTGATTGGCTAAACAATCTCGCATTAAAAAT...GTTAACTTGACTGTACATTGAGATATTCTGCAGCTGATAGAGCAGCATTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS CAA 72 bp CAGCAGTGCCTGAGAGCGGGGCTCTGTCGCCGGAGGTaGTTTCCTTTCATTCGAGGAGAGACGGGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: QQCLRAGLCRRR*FPFIRGETGSR
Trigger: CCGCGAGCCCGTCTCTCCTCGAATGAAAGGAAACAACCTCCGGCGACAGAGCCCCGCTCTCAGGCACTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370803.8
ENST00000625464.2
CDS CAA 90 bp TCGGTTCTCCAGCAGTGCCTGAGAGCGGGGCTCTGTCGCCGGAGGTaGTTTCCTTTCATTCGAGGAGAGACGGGCTCGCGGAGCGCCCTT +
Preference number: 6 (lower is better)
Translates to: SVLQQCLRAGLCRRR*FPFIRGETGSRSAL
Trigger: AAGGGCGCTCCGCGAGCCCGTCTCTCCTCGAATGAAAGGAAACAACCTCCGGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
CDS TCA 72 bp AGAGAAAGAAGTCGGTCTCGGTTCTCCAGCAGTGCCTaGGAGCGGGGCTCTGTCGCCGGAGGTTGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: RERSRSRFSSSA*ERGSVAGGCFL
Trigger: AAGGAAACAACCTCCGGCGACAGAGCCCCGCTCTCAGGCACTGCTGGAGAACCGAGACCGACTTCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370803.8
ENST00000625464.2
CDS CAA 90 bp AGTGGTAGTGGTATGTCCTGTGACATGTTTTCACATCACAACCAATaGTTGCTCCAGGACAATGGCACAAAGAACACATCAGCTTCGTGC +
Preference number: 6 (lower is better)
Translates to: SGSGMSCDMFSHHNQ*LLQDNGTKNTSASC
Trigger: GCACGAAGCTGATGTGTTCTTTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGAAAACATGTCACAGGACATACCACTACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS CCA 72 bp ACATTTAGGCCTGGTGTCACTAGGGCTGCTTCTGTGTaGAGACCTATCTCTATAGGAACTACTTTCCATTTC +
Preference number: 6 (lower is better)
Translates to: TFRPGVTRAASV*RPISIGTTFHF
Trigger: GAAATGGAAAGTAGTTCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCTAGTGACACCAGGCCTAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS CCA 72 bp GAAAAGAGCATGCACTTATGGTGCGCTGCCACCTTCTaGTTTTCAGATATTAGTAACTGTCCACATTCCTTG +
Preference number: 6 (lower is better)
Translates to: EKSMHLWCAATF*FSDISNCPHSL
Trigger: CAAGGAATGTGGACAGTTACTAATATCTGAAAACCAGAAGGTGGCAGCGCACCATAAGTGCATGCTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS CCA 72 bp GTTTTCACATCACAACCAATTGTTGCTCCAGGACAATaGCACAAAGAACACATCAGCTTCGTGCCTCTTTTA +
Preference number: 6 (lower is better)
Translates to: VFTSQPIVAPGQ*HKEHISFVPLL
Trigger: TAAAAGAGGCACGAAGCTGATGTGTTCTTTGTGCCATTGTCCTGGAGCAACAATTGGTTGTGATGTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS TCA 72 bp TATCAAAGTCTCCAAATTCTGCTCTTGATGTTGTTGTaGGCTGGACTGTGCCAGAAGAAAACAACATGCACT +
Preference number: 6 (lower is better)
Translates to: YQSLQILLLMLL*AGLCQKKTTCT
Trigger: AGTGCATGTTGTTTTCTTCTGGCACAGTCCAGCTCACAACAACATCAAGAGCAGAATTTGGAGACTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2
CDS CAA 90 bp GCTGCCACCTTCTGGTTTTCAGATATTAGTAACTGTCCACATTCCTaGTCTCTATTTGACTTACAAAAGCCACATTTGCGCTGTCTTGTA +
Preference number: 6 (lower is better)
Translates to: AATFWFSDISNCPHS*SLFDLQKPHLRCLV
Trigger: TACAAGACAGCGCAAATGTGGCTTTTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTTACTAATATCTGAAAACCAGAAGGTGGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332070.7
ENST00000370799.5
ENST00000370800.4
ENST00000370803.8
ENST00000625464.2