RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000118482

Ensembl transcript IDs: ENST00000262043.8, ENST00000393387.5, ENST00000420043.1, ENST00000481385.6, ENST00000494284.6, ENST00000505138.1, ENST00000506783.5, ENST00000509330.5, ENST00000509876.5, ENST00000515594.5

Found 1020 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGACCCATCATACGCTGTGGCTGACCTGGGAGATGAACAACAGGTaGCCAGGGAACCATGGGATTTTGAGCAAAGCCAAAGCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: RTHHTLWLTWEMNNR*PGNHGILSKAKAWR
Trigger: CCTCCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCCCTGGCCACCTGTTGTTCATCTCCCAGGTCAGCCACAGCGTATGATGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp TTGCTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTaGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTAT +
Preference number: 1 (lower is better)
Translates to: LLLVLPTPRVTMAPF*PPNVFNLVKILRAY
Trigger: ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp GCTAGACTTGAGATGCTGAAGGTTGGGCTGCTGTGGCCTCATGGGTaGAAAGTTTGTACTTGTTCTGGGGCTGGTGCTTCTGGAAGTAAA +
Preference number: 1 (lower is better)
Translates to: ARLEMLKVGLLWPHG*KVCTCSGAGASGSK
Trigger: TTTACTTCCAGAAGCACCAGCCCCAGAACAAGTACAAACTTTTCACCCATGAGGCCACAGCAGCCCAACCTTCAGCATCTCAAGTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp GCCTGGGTGTTCAAGCTCTTCCTTCACGTGACTATTGGTTTTCATTaGTGGGGCCTGTTGCTGAGGCTTATGACACTGTTTCTGGCTAGA +
Preference number: 1 (lower is better)
Translates to: AWVFKLFLHVTIGFH*WGLLLRLMTLFLAR
Trigger: TCTAGCCAGAAACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAGGAAGAGCTTGAACACCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp AATGCTCAACGCCTGGGTGTTCAAGCTCTTCCTTCACGTGACTATTaGTTTTCATTGCTGGGGCCTGTTGCTGAGGCTTATGACACTGTT +
Preference number: 1 (lower is better)
Translates to: NAQRLGVQALPSRDY*FSLLGPVAEAYDTV
Trigger: AACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAGGAAGAGCTTGAACACCCAGGCGTTGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp AAATCCAAACATGCTTTGTGGGGGAAAATTAGGAGGCCCTGGAAATaGAAATCCAGGTGGGCTAGACTTGAGATGCTGAAGGTTGGGCTG +
Preference number: 1 (lower is better)
Translates to: KSKHALWGKIRRPWK*KSRWARLEMLKVGL
Trigger: CAGCCCAACCTTCAGCATCTCAAGTCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp TGGGTGTTCAAGCTCTTCCTTCACGTGACTATTGGTTTTCATTGCTaGGGCCTGTTGCTGAGGCTTATGACACTGTTTCTGGCTAGAATG +
Preference number: 1 (lower is better)
Translates to: WVFKLFLHVTIGFHC*GLLLRLMTLFLARM
Trigger: CATTCTAGCCAGAAACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAGGAAGAGCTTGAACACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp TCGTCCTGCTGCTTGCCTAGGATCCCTTTTCAGGTTGATAAACTGTaGAGACCTCGCTGTATTAGCAACAAGGTTTTCACTACAGCTCAC +
Preference number: 1 (lower is better)
Translates to: SSCCLPRIPFQVDKL*RPRCISNKVFTTAH
Trigger: GTGAGCTGTAGTGAAAACCTTGTTGCTAATACAGCGAGGTCTCCACAGTTTATCAACCTGAAAAGGGATCCTAGGCAAGCAGCAGGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp TGGTGGAAATCCAAACATGCTTTGTGGGGGAAAATTAGGAGGCCCTaGAAATGGAAATCCAGGTGGGCTAGACTTGAGATGCTGAAGGTT +
Preference number: 1 (lower is better)
Translates to: WWKSKHALWGKIRRP*KWKSRWARLEMLKV
Trigger: AACCTTCAGCATCTCAAGTCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTTCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp TTCCGGCAACTATCTCCATCTTTGCTTTCTGAAGTAGTTACAGGCTaGCTTCGTCCTGCTGCTTGCCTAGGATCCCTTTTCAGGTTGATA +
Preference number: 1 (lower is better)
Translates to: FRQLSPSLLSEVVTG*LRPAACLGSLFRLI
Trigger: TATCAACCTGAAAAGGGATCCTAGGCAAGCAGCAGGACGAAGTCAGCCTGTAACTACTTCAGAAAGCAAAGATGGAGATAGTTGCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp CATGTGTTTTTCTCCATTCCGGCAACTATCTCCATCTTTGCTTTCTaGAGTAGTTACAGGCTGACTTCGTCCTGCTGCTTGCCTAGGATC +
Preference number: 1 (lower is better)
Translates to: HVFFSIPATISIFAF*SSYRLTSSCCLPRI
Trigger: GATCCTAGGCAAGCAGCAGGACGAAGTCAGCCTGTAACTACTTCAGAAAGCAAAGATGGAGATAGTTGCCGGAATGGAGAAAAACACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp ACAGGTTTTTGGTTGTGTCTTCTGACTCACACTGAACAGTTGGGTTaGTCAGTGAAGGGTTTCAGACAGTTCAGTGGAACGCAAAGAAAG +
Preference number: 1 (lower is better)
Translates to: TGFWLCLLTHTEQLG*SVKGFRQFSGTQRK
Trigger: CTTTCTTTGCGTTCCACTGAACTGTCTGAAACCCTTCACTGAGCAACCCAACTGTTCAGTGTGAGTCAGAAGACACAACCAAAAACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp TGTTTTGTTCCATCACTGACTGGGCCTGGTCATATACTTGACCAGTaGTGCCCAAAAGGCTTTGAAGTATATCATCCACAGGAAGAGGTT +
Preference number: 1 (lower is better)
Translates to: CFVPSLTGPGHILDQ*CPKGFEVYHPQEEV
Trigger: AACCTCTTCCTGTGGATGATATACTTCAAAGCCTTTTGGGCACCACTGGTCAAGTATATGACCAGGCCCAGTCAGTGATGGAACAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp ACACGCCAGGAAGAAATCTTAAAGGTTTTGGTGGCTCCTGTTTGGTaGCTTCCATTAAAGGTTCAACTGCTGTTGGAAGGTCTTCCTGAA +
Preference number: 1 (lower is better)
Translates to: TRQEEILKVLVAPVW*LPLKVQLLLEGLPE
Trigger: TTCAGGAAGACCTTCCAACAGCAGTTGAACCTTTAATGGAAGTCACCAAACAGGAGCCACCAAAACCTTTAAGATTTCTTCCTGGCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp CACTTCCCACTCCCAGTCCACCACTGCAGGTTGGAAAGCAGTTACTaGTGTTGTTACCTGACATTTTCTGAGTTTGATATCTGTGATAAT +
Preference number: 1 (lower is better)
Translates to: HFPLPVHHCRLESSY*CCYLTFSEFDICDN
Trigger: ATTATCACAGATATCAAACTCAGAAAATGTCAGGTAACAACAGCAGTAACTGCTTTCCAACCTGCAGTGGTGGACTGGGAGTGGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 90 bp TTTGTTCCATCACTGACTGGGCCTGGTCATATACTTGACCAGTGGTaGCCAAAAGGCTTTGAAGTATATCATCCACAGGAAGAGGTTTAT +
Preference number: 1 (lower is better)
Translates to: FVPSLTGPGHILDQW*PKGFEVYHPQEEVY
Trigger: ATAAACCTCTTCCTGTGGATGATATACTTCAAAGCCTTTTGGGCACCACTGGTCAAGTATATGACCAGGCCCAGTCAGTGATGGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp AAATGTTTCAGTCAATCAGCGGTTACAAGATCTGCCTCTAACCCCTaGAGATGCTCATCCCTAATAGAAAGCTATATGGGCCTTGCCTAT +
Preference number: 1 (lower is better)
Translates to: KCFSQSAVTRSASNP*RCSSLIESYMGLAY
Trigger: ATAGGCAAGGCCCATATAGCTTTCTATTAGGGATGAGCATCTCCAGGGGTTAGAGGCAGATCTTGTAACCGCTGATTGACTGAAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 90 bp TACAAAAGAACTTACAGGTTTTTGGTTGTGTCTTCTGACTCACACTaGACAGTTGGGTTGCTCAGTGAAGGGTTTCAGACAGTTCAGTGG +
Preference number: 1 (lower is better)
Translates to: YKRTYRFLVVSSDSH*TVGLLSEGFQTVQW
Trigger: CCACTGAACTGTCTGAAACCCTTCACTGAGCAACCCAACTGTTCAGTGTGAGTCAGAAGACACAACCAAAAACCTGTAAGTTCTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 90 bp CAGTCCACCACTGCAGGTTGGAAAGCAGTTACTGCTGTTGTTACCTaGCATTTTCTGAGTTTGATATCTGTGATAATTTTGCCACTTGGC +
Preference number: 1 (lower is better)
Translates to: QSTTAGWKAVTAVVT*HFLSLISVIILPLG
Trigger: GCCAAGTGGCAAAATTATCACAGATATCAAACTCAGAAAATGTCAGGTAACAACAGCAGTAACTGCTTTCCAACCTGCAGTGGTGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 90 bp GAACACACGAGTTTTTCTCTGCAGAACACAACTTTTCCTCTACATTaGTTTGTTCTGTTAAGTGCTCCTTGTTGTGTGACAGGCCAGGCA +
Preference number: 1 (lower is better)
Translates to: EHTSFSLQNTTFPLH*FVLLSAPCCVTGQA
Trigger: TGCCTGGCCTGTCACACAACAAGGAGCACTTAACAGAACAAATCAATGTAGAGGAAAAGTTGTGTTCTGCAGAGAAAAACTCGTGTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp ACACTGATACTTCAGGTACCACTTCAATTTGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTATGGTACTCAGGTTTCAGTGACATAC +
Preference number: 1 (lower is better)
Translates to: TLILQVPLQFVRYFG*TFYSPYGTQVSVTY
Trigger: GTATGTCACTGAAACCTGAGTACCATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCTGAAGTATCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp TCTGCAGAACACAACTTTTCCTCTACATTGATTTGTTCTGTTAAGTaGTCCTTGTTGTGTGACAGGCCAGGCAGCATGTGTTTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: SAEHNFSSTLICSVK*SLLCDRPGSMCFSP
Trigger: TGGAGAAAAACACATGCTGCCTGGCCTGTCACACAACAAGGAGCACTTAACAGAACAAATCAATGTAGAGGAAAAGTTGTGTTCTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 90 bp TCTATGCAGTTCAAGCCCAGGTCCATCAAAAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACCCAAAGGAATAAGGTACATATCTTT +
Preference number: 1 (lower is better)
Translates to: SMQFKPRSIKRHKRV*NFICGTQRNKVHIF
Trigger: AAAGATATGTACCTTATTCCTTTGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGCTTGAACTGCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp TCTCTAAGTTCCAGTTTCCTCAGCTCTAAGCCTTCACCTTTGAGTTaGCCAATGTTTATACTAAGTGCTCAAAACCAGGGATGCCTTACA +
Preference number: 1 (lower is better)
Translates to: SLSSSFLSSKPSPLS*PMFILSAQNQGCLT
Trigger: TGTAAGGCATCCCTGGTTTTGAGCACTTAGTATAAACATTGGTCAACTCAAAGGTGAAGGCTTAGAGCTGAGGAAACTGGAACTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 90 bp TTCATAAGAATGTCTTTGAGAGAATGTCTGACACTTTGCCTGATCTaGTCTGCAGAAGGCTTGGAAGCAGAAGCAGCAGGATGTACATTA +
Preference number: 1 (lower is better)
Translates to: FIRMSLRECLTLCLI*SAEGLEAEAAGCTL
Trigger: TAATGTACATCCTGCTGCTTCTGCTTCCAAGCCTTCTGCAGATCAGATCAGGCAAAGTGTCAGACATTCTCTCAAAGACATTCTTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp TCATCCACAGGAAGAGGTTTATTTGCTAATTCCAGAGTAGTAGGTTaGTTCTCCCAGCCAATCAACACGCCAGGAAGAAATCTTAAAGGT +
Preference number: 1 (lower is better)
Translates to: SSTGRGLFANSRVVG*FSQPINTPGRNLKG
Trigger: ACCTTTAAGATTTCTTCCTGGCGTGTTGATTGGCTGGGAGAATCAACCTACTACTCTGGAATTAGCAAATAAACCTCTTCCTGTGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp TTTCTGATTGCCACAAAGATTACATGGGGTGAACTTTACAGGTACTaGGATGCCCTGGTACTTTTACCTAATAGAGGTATGCATTCACTG +
Preference number: 1 (lower is better)
Translates to: FLIATKITWGELYRY*DALVLLPNRGMHSL
Trigger: CAGTGAATGCATACCTCTATTAGGTAAAAGTACCAGGGCATCTCAGTACCTGTAAAGTTCACCCCATGTAATCTTTGTGGCAATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 90 bp TGTTCTTTCATTGGGGCATCACTCTCAATTTCTATTTCACCTTTATaGGTTATTTTGGTGATTGGCCGTCGTTCCACTTCTCTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: CSFIGASLSISISPL*VILVIGRRSTSLCS
Trigger: AGAGCAGAGAGAAGTGGAACGACGGCCAATCACCAAAATAACTCATAAAGGTGAAATAGAAATTGAGAGTGATGCCCCAATGAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp CTTTTAGAAGGAAATTCTGATGGACATGTGTTTCCAACTTCAAAATaGGATGTCGCTACTGCTGATCCTCTTCGAAATGGGTGCACAGTT +
Preference number: 1 (lower is better)
Translates to: LLEGNSDGHVFPTSK*DVATADPLRNGCTV
Trigger: AACTGTGCACCCATTTCGAAGAGGATCAGCAGTAGCGACATCTCATTTTGAAGTTGGAAACACATGTCCATCAGAATTTCCTTCTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp GAACATGCTTTTTCCAAGCTTGCAGAATTGCCTTTACTTTTCTTCTaGATGCCTCATTGCAACTTCAGATGCTGGATGGTATTTGTTCCT +
Preference number: 1 (lower is better)
Translates to: EHAFSKLAELPLLFF*MPHCNFRCWMVFVP
Trigger: AGGAACAAATACCATCCAGCATCTGAAGTTGCAATGAGGCATTCAGAAGAAAAGTAAAGGCAATTCTGCAAGCTTGGAAAAAGCATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 90 bp ATTTCGGCTGCACCTTCTATTCTCCTTATGGTACTCAGGTTTCAGTaGCATACATACTTCTTCTTTAACCTGACTCCTTTCTGGTTGTTT +
Preference number: 1 (lower is better)
Translates to: ISAAPSILLMVLRFQ*HTYFFFNLTPFWLF
Trigger: AAACAACCAGAAAGGAGTCAGGTTAAAGAAGAAGTATGTATGTCACTGAAACCTGAGTACCATAAGGAGAATAGAAGGTGCAGCCGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp CACACTCCCATCATATTCGGCCATGTGTTCTCTCATAATAAAGTGTaGCTTTTCTTTAAAATAGCACTTCCCAAACTATGGTCCAAGAAC +
Preference number: 1 (lower is better)
Translates to: HTPIIFGHVFSHNKV*LFFKIALPKLWSKN
Trigger: GTTCTTGGACCATAGTTTGGGAAGTGCTATTTTAAAGAAAAGGCACACTTTATTATGAGAGAACACATGGCCGAATATGATGGGAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp CTCTCGTTCTTTGTCCTTCTCATAGTCTTCACTTTTAGGTTTATCTaGCTTCTTGTCTACATTCCTACTATCTCTGCTTGCTTTTCCATC +
Preference number: 1 (lower is better)
Translates to: LSFFVLLIVFTFRFI*LLVYIPTISACFSI
Trigger: GATGGAAAAGCAAGCAGAGATAGTAGGAATGTAGACAAGAAGCCAGATAAACCTAAAAGTGAAGACTATGAGAAGGACAAAGAACGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 90 bp GGGACCTATGTAAGAGGGCAGAAAATCAAGGTATATTCAGGATTGTaGCTGGCTGGGAATATTGTACTACAGTTTTATAATCAGTACAAC +
Preference number: 1 (lower is better)
Translates to: GTYVRGQKIKVYSGL*LAGNIVLQFYNQYN
Trigger: GTTGTACTGATTATAAAACTGTAGTACAATATTCCCAGCCAGTCACAATCCTGAATATACCTTGATTTTCTGCCCTCTTACATAGGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp AACTATAAACGGAAGTACTTGGCATATAATAAAAGCAGGAAGAGTTaGTGCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGA +
Preference number: 1 (lower is better)
Translates to: NYKRKYLAYNKSRKS*CRRLPGSRWDKCNR
Trigger: TCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTATATGCCAAGTACTTCCGTTTATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp ACAAGGAGCAAGAAAAGCTTCCTCCATAATCTTGCAAAAGATAACTaGTTTGTGTTCACTTGCAGGCCACAAAGTATATTTAGGTTGCTA +
Preference number: 1 (lower is better)
Translates to: TRSKKSFLHNLAKDN*FVFTCRPQSIFRLL
Trigger: TAGCAACCTAAATATACTTTGTGGCCTGCAAGTGAACACAAACCAGTTATCTTTTGCAAGATTATGGAGGAAGCTTTTCTTGCTCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp ATCTACACAACTAGGCAAACCTACAAGGCTGTTTTCTGTCTTATTTaGATTTGTACAAGCAGCATCACTAGAAATATCAGAAGATCCAGC +
Preference number: 1 (lower is better)
Translates to: IYTTRQTYKAVFCLI*ICTSSITRNIRRSS
Trigger: GCTGGATCTTCTGATATTTCTAGTGATGCTGCTTGTACAAATCCAAATAAGACAGAAAACAGCCTTGTAGGTTTGCCTAGTTGTGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 90 bp TATAAACGGAAGTACTTGGCATATAATAAAAGCAGGAAGAGTTGGTaGAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAA +
Preference number: 1 (lower is better)
Translates to: YKRKYLAYNKSRKSW*RRLPGSRWDKCNRK
Trigger: TTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTATATGCCAAGTACTTCCGTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 90 bp ATGCTTTTTCCAAGCTTGCAGAATTGCCTTTACTTTTCTTCTGAATaGCTCATTGCAACTTCAGATGCTGGATGGTATTTGTTCCTATTT +
Preference number: 1 (lower is better)
Translates to: MLFPSLQNCLYFSSE*LIATSDAGWYLFLF
Trigger: AAATAGGAACAAATACCATCCAGCATCTGAAGTTGCAATGAGGCATTCAGAAGAAAAGTAAAGGCAATTCTGCAAGCTTGGAAAAAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp TCTGTGCCTATGAGCTATAACAATGGCACATTCTGTTGTAATAAATaGCACCATGTAGTTGTAATTCAAAATCAGACTCTTATCAAGGCC +
Preference number: 1 (lower is better)
Translates to: SVPMSYNNGTFCCNK*HHVVVIQNQTLIKA
Trigger: GGCCTTGATAAGAGTCTGATTTTGAATTACAACTACATGGTGCCATTTATTACAACAGAATGTGCCATTGTTATAGCTCATAGGCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp ATCATTCTAGAAACTCTCCAAAAAGTAACTATAAACGGAAGTACTTaGCATATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTG +
Preference number: 1 (lower is better)
Translates to: IILETLQKVTINGST*HIIKAGRVGAEGYL
Trigger: CAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTATATGCCAAGTACTTCCGTTTATAGTTACTTTTTGGAGAGTTTCTAGAATGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 90 bp GGAAATTTCAGAGGGAGAAGAAAATGTTTCGTGGAGACTTCTGCGTaGTTCATTATTAATAAGTCATTTTGCTATCCTCTTCAAGCAATC +
Preference number: 1 (lower is better)
Translates to: GNFRGRRKCFVETSA*FIINKSFCYPLQAI
Trigger: GATTGCTTGAAGAGGATAGCAAAATGACTTATTAATAATGAACCACGCAGAAGTCTCCACGAAACATTTTCTTCTCCCTCTGAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGGAACCATGGGATTTTaGGCAAAGCCAAAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNGTMGF*AKPKPG
Trigger: TCCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTCCAGAGTAGTAGGTTaGTTCTCCCAGCCAATCAAC +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNSRVVG*FSQPIN
Trigger: GTTGATTGGCTGGGAGAATCAACCTACTACTCTGGA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTTGCAAAACCCACACTaGTTGCTGGGAGTCCACATA +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNLQNPH*LLGVHI
Trigger: TATGTGGACTCCCAGCAAGCAGTGTGGGTTTTGCAA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAGGTGGCAATGCTATTaGTGGTGCACTTTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNRWQCY*WCTFRS
Trigger: ACTCCTGAAAGTGCACCACCAATAGCATTGCCACCT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGTGCCCAAAAGGCTTTaGAGTATATCATCCACAGGA +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNVPKRL*SISSTG
Trigger: TCCTGTGGATGATATACTTCAAAGCCTTTTGGGCAC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAGTCTGATGAATTTCTaGCTTCACCAGACTCCCGTT +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNSLMNF*LHQTPV
Trigger: AACGGGAGTCTGGTGAAGGCAGAAATTCATCAGACT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATAGGCTGACTTCGTCCTaGTGCTTGCCTAGGATCCCT +
Preference number: 2 (lower is better)
Translates to: APFWPPNVFNLVKILRAYRLTSS*CLPRIP
Trigger: AGGGATCCTAGGCAAGCAGCAGGACGAAGTCAGCCT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACCAAACTGTCTGAGGTaGTATCCTGCCACCTACTTG +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPPNCLR*YPATYL
Trigger: CAAGTAGGTGGCAGGATATCACCTCAGACAGTTTGG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATGAAGTAGTTACAGGCTaGCTTCGTCCTGCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: APFWPPNVFNLVKILRAYEVVTG*LRPAAC
Trigger: GCAAGCAGCAGGACGAAGTCAGCCTGTAACTACTTC...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATACTTCTTCTTTAACCTaGCTCCTTTCTGGTTGTTTC +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNTSSLT*LLSGCF
Trigger: GAAACAACCAGAAAGGAGTCAGGTTAAAGAAGAAGT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCATTCAAGCAACCAGGATaGGCGTGTGACTTATCACTC +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPFKQPG*ACDLSL
Trigger: GAGTGATAAGTCACACGCTCATCCTGGTTGCTTGAA...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 90 bp CAGTTCCAGGCATCTCTGGACGTGGAGCAGGAGAGAACGTTGACTTaGGAGACTCCTGTTTCTCCTCCTCAAAGAATTCAGAAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: QFQASLDVEQERTLT*ETPVSPPQRIQKPK
Trigger: TTTTGGCTTCTGAATTCTTTGAGGAGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTCCACGTCCAGAGATGCCTGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGTACTCAGGTTTCAGTaGCATACATACTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNVLRFQ*HTYFFF
Trigger: AAAGAAGAAGTATGTATGTCACTGAAACCTGAGTAC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAAGCGCTTTCTGCTACTaGAGTATGCAAAGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPSAFCY*SMQRAK
Trigger: CTTTGCTCTTTGCATACTTCAGTAGCAGAAAGCGCT...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAAAAATGCTCAACGCCTaGGTGTTCAAGCTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPKMLNA*VFKLFL
Trigger: AAGGAAGAGCTTGAACACCCAGGCGTTGAGCATTTT...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATCCAACACAATCACCATaGAACCAGTCATCACATCTC +
Preference number: 2 (lower is better)
Translates to: APFWPPNVFNLVKILRAYPTQSP*NQSSHL
Trigger: GAGATGTGATGACTGGTTTCATGGTGATTGTGTTGG...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAATAACTAGGGACCGTTaGTATGAAGAAGGGATGATG +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPITRDR*YEEGMM
Trigger: CATCATCCCTTCTTCATACCAACGGTCCCTAGTTAT...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAAGCATTCAACTGTTTTaGATTTTGGTCAGGCACATC +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPSIQLF*ILVRHI
Trigger: GATGTGCCTGACCAAAATTCAAAACAGTTGAATGCT...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATTCAAATGAGGAGCTATaGTCAGAGCCTTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: APFWPPNVFNLVKILRAYSNEEL*SEPSLL
Trigger: AAGAAGAGAAGGCTCTGATCATAGCTCCTCATTTGA...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTCTCATTCTGATAAGATaGTCAGGAGTTACTTCTCCT +
Preference number: 2 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPLILIR*SGVTSP
Trigger: AGGAGAAGTAACTCCTGATCATCTTATCAGAATGAG...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTTGGCGGCTGGTTCCTaGATCTCCATGGCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQLAAGS*ISMAAS
Trigger: GGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTTACATGTCCAGTTTGTaGAGGATGATGAGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPYMSSL*RMMRFF
Trigger: AAAGAACCTCATCATCCTGCACAAACTGGACATGTA...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATAATAGATTAGGTCTATaGAGTTCAAGCCCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: APFWPPNVFNLVKILRAYNRLGL*SSSPGP
Trigger: TGGACCTGGGCTTGAACTGCATAGACCTAATCTATT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAAATAAATGTACCCCTTaGGCTTCTGATTCTTGGTCA +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPNKCTP*ASDSWS
Trigger: TGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 90 bp GAACTTACAGGTTTTTGGTTGTGTCTTCTGACTCACACTGAACAGTaGGGTTGCTCAGTGAAGGGTTTCAGACAGTTCAGTGGAACGCAA +
Preference number: 2 (lower is better)
Translates to: ELTGFWLCLLTHTEQ*GCSVKGFRQFSGTQ
Trigger: TTGCGTTCCACTGAACTGTCTGAAACCCTTCACTGAGCAACCCAACTGTTCAGTGTGAGTCAGAAGACACAACCAAAAACCTGTAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACGTAAGAAACGCTACTTaGCTGGCTGTTTCTGTCATC +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADVRNAT*LAVSVI
Trigger: GATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTAC...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTTCTGCTTCATTGTCTaGATGTTTGCGAGCTACTCC +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADFCFIV*MFASYS
Trigger: GGAGTAGCTCGCAAACATTCAGACAATGAAGCAGAA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGCTCAAAACCAGGGATaGCTTACAGAGGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVAQNQG*LTEGSR
Trigger: CCTTGAGCCCTCTGTAAGGCATCCCTGGTTTTGAGC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 90 bp ATCAACACGCCAGGAAGAAATCTTAAAGGTTTTGGTGGCTCCTGTTaGGTGACTTCCATTAAAGGTTCAACTGCTGTTGGAAGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: INTPGRNLKGFGGSC*VTSIKGSTAVGRSS
Trigger: GGAAGACCTTCCAACAGCAGTTGAACCTTTAATGGAAGTCACCAAACAGGAGCCACCAAAACCTTTAAGATTTCTTCCTGGCGTGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACGAGGATCAAGTGAGATaGTGTATGAGAACTCACTCT +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADEDQVR*CMRTHS
Trigger: AGAGTGAGTTCTCATACATCATCTCACTTGATCCTC...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTTTCTGGCTTCTCCAATaGCTTATTGGCGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: APKGIRYISLTCFMLLAAFWLLQ*LIGGWF
Trigger: GAACCAGCCGCCAATAAGTCATTGGAGAAGCCAGAA...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACAGATGCTGTCTGTGTTaGCTAGTGGTATCTTTAGAC +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADRCCLC*LVVSLD
Trigger: GTCTAAAGATACCACTAGTCAACACAGACAGCATCT...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGGCCTGGTCATATACTTaGCCAGTGGTGCCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQAWSYT*PVVPKR
Trigger: CCTTTTGGGCACCACTGGTCAAGTATATGACCAGGC...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTGTGGGTACAACACATaGAGAAATGGAGGTGAATGT +
Preference number: 2 (lower is better)
Translates to: AEGYLDLDGINVTEKASTCGYNT*RNGGEC
Trigger: ACATTCACCTCCATTTCTGCATGTGTTGTACCCACA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACGTCATCCTGAAGGTTTaGTGTTTCATGGGACTCTAT +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADVILKV*CFMGLY
Trigger: ATAGAGTCCCATGAAACAGCAAACCTTCAGGATGAC...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATTACTTCATACTTTGCTaGAACAATTTTCTTCGGAGC +
Preference number: 2 (lower is better)
Translates to: APFWPPNVFNLVKILRAYYFILC*NNFLRS
Trigger: GCTCCGAAGAAAATTGTTGCAGCAAAGTATGAAGTA...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCATTTGGTAACAAATTTTaGCACAGAAGGCATGTTGAT +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPFGNKF*HRRHVD
Trigger: ATCAACATGCCTTCTGTGGCAAAATTTGTTACCAAA...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTTCGTCCTGCTGCTTaGCTAGGATCCCTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLRPAA*LGSLFR
Trigger: CCTGAAAAGGGATCCTAGGCAAGCAGCAGGACGAAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACCACACAAATTTCCTTaGTTCCTGATGCTTTTATTT +
Preference number: 2 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPPHKFP*FLMLLF
Trigger: AAATAAAAGCATCAGGAACCAAGGAAATTTGTGTGG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTATCCTGCCACCTACTTaGATACTATCTGGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: APKGIRYISLTCFMLLAAILPPT*ILSGRS
Trigger: GGACCTACCAGATAGTATTCAAGTAGGTGGCAGGAT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTTTGCCTGATCTGATCTaGAGAAGGCTTGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: APKGIRYISLTCFMLLAALPDLI*RRLGSR
Trigger: TCTGCTTCCAAGCCTTCTGCAGATCAGATCAGGCAA...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAATAAATGTACCCCTTaGGCTTCTGATTCTTGGTCA +
Preference number: 2 (lower is better)
Translates to: AEGYLDLDGINVTEKASTNKCTP*ASDSWS
Trigger: TGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATGGGTCCCACACTGCTaGCTTCAAATATGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEWVPHC*LQIWRK
Trigger: CTTCCTCCATATTTGAAGCCAGCAGTGTGGGACCCA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACGCGTCCTCAAGAATATaGTCATCTTCATGGGATAAT +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADASSRI*SSSWDN
Trigger: ATTATCCCATGAAGATGACCATATTCTTGAGGACGC...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGATCTGCAGAAGGCTTaGAAGCAGAAGCAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDDLQKA*KQKQQD
Trigger: ATCCTGCTGCTTCTGCTTCCAAGCCTTCTGCAGATC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGTTGGGTTGCTCAGTaGAGGGTTTCAGACAGTTCA +
Preference number: 2 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSWVAQ*RVSDSS
Trigger: TGAACTGTCTGAAACCCTTCACTGAGCAACCCAACT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTCTTCTGACTCACACTaGACAGTTGGGTTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCSSDSH*TVGLLS
Trigger: ACTGAGCAACCCAACTGTTCAGTGTGAGTCAGAAGA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAAAAAGGAATCTCCCTaGAAGTCTCCAGAAAATGAA +
Preference number: 2 (lower is better)
Translates to: AEGYLDLDGINVTEKASTKKESP*KSPENE
Trigger: TTCATTTTCTGGAGACTTTCAGGGAGATTCCTTTTT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGGATTCACTGCCCTTTaGGTGCTTAGGCTATTTCCC +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLGFTAL*VLRLFP
Trigger: GGGAAATAGCCTAAGCACTCAAAGGGCAGTGAATCC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCCGGCAACATATGACTaGCTTGGTGAACTAACAGGT +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCPATYD*LGELTG
Trigger: ACCTGTTAGTTCACCAAGTCAGTCATATGTTGCCGG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGCAGGAGAGAACGTTaGCTTTGGAGACTCCTGTTT +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSRRER*LWRLLF
Trigger: AAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGGGAGTCTCAGCTATATaGCTAGTACTAGCACAGGCA +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQGVSAI*LVLAQA
Trigger: TGCCTGTGCTAGTACTAGTCATATAGCTGAGACTCC...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGGTCCAAGAACCCCTaGGATCTTTTCAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDWSKNP*DLFKES
Trigger: GGATTCCTTGAAAAGATCGCAGGGGTTCTTGGACCA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATCTGCCTCTAACCCCTaGAGATGCTCATCCCTAATA +
Preference number: 2 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCESASNP*RCSSLI
Trigger: TATTAGGGATGAGCATCTCCAGGGGTTAGAGGCAGA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGGTACTGAGATGCCCTaGTACTTTTACCTAATAGAG +
Preference number: 2 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIGTEMP*YFYLIE
Trigger: CTCTATTAGGTAAAAGTACCAGGGCATCTCAGTACC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTCTGTCAGGTATTCTaGGGAGCCAGATACTGGATA +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLCQVF*GARYWI
Trigger: TATCCAGTATCTGGCTCCCCAGAATACCTGACAGAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 90 bp CTGGCAATTGGTCTCCATAATCAGACCTTGAAAATAGCAGTTAACTaGGGAGAAAGAATCTCTGTGCCTATGAGCTATAACAATGGCACA +
Preference number: 2 (lower is better)
Translates to: LAIGLHNQTLKIAVN*GERISVPMSYNNGT
Trigger: TGTGCCATTGTTATAGCTCATAGGCACAGAGATTCTTTCTCCCAAGTTAACTGCTATTTTCAAGGTCTGATTATGGAGACCAATTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 90 bp TTGCCAGATTGGGCTGGAAATACATGTAACCAGTCTGTGTCCTGTTaGAATAATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAA +
Preference number: 2 (lower is better)
Translates to: LPDWAGNTCNQSVSC*NNLCLHQSLCIPDQ
Trigger: TTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGATTATTCAAACAGGACACAGACTGGTTACATGTATTTCCAGCCCAATCTGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 90 bp GAACACTCTACAACACAAGGAGCAAGAAAAGCTTCCTCCATAATCTaGCAAAAGATAACTGGTTTGTGTTCACTTGCAGGCCACAAAGTA +
Preference number: 2 (lower is better)
Translates to: EHSTTQGARKASSII*QKITGLCSLAGHKV
Trigger: TACTTTGTGGCCTGCAAGTGAACACAAACCAGTTATCTTTTGCAAGATTATGGAGGAAGCTTTTCTTGCTCCTTGTGTTGTAGAGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATTTGGTTGTGTCTTCTaGCTCACACTGAACAGTTGG +
Preference number: 2 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEFGCVF*LTLNSW
Trigger: CCAACTGTTCAGTGTGAGTCAGAAGACACAACCAAA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGACCAGGATGAGCGTGTaGCTTATCACTCAAAGAATG +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQTRMSV*LITQRM
Trigger: CATTCTTTGAGTGATAAGTCACACGCTCATCCTGGT...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAGGAGGCTTTCTGATTaGCACAAAGATTACATGGGG +
Preference number: 2 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCERRLSD*HKDYMG
Trigger: CCCCATGTAATCTTTGTGGCAATCAGAAAGCCTCCT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACTGAACAGTTGGGTTaGTCAGTGAAGGGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTEQLG*SVKGFR
Trigger: TCTGAAACCCTTCACTGAGCAACCCAACTGTTCAGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGACCTAAACTGGTATTaGTCCATACTATTGCATTTA +
Preference number: 2 (lower is better)
Translates to: AEGYLDLDGINVTEKASTDLNWY*SILLHL
Trigger: TAAATGCAATAGTATGGAGCAATACCAGTTTAGGTC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTATTTCTTTGATACATTaGTTACGGGGAATCAACTGT +
Preference number: 2 (lower is better)
Translates to: AEGYLDLDGINVTEKASTISLIH*LRGINC
Trigger: ACAGTTGATTCCCCGTAAGCAATGTATCAAAGAAAT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTAT +
Preference number: 2 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLVRYFG*TFYSPY
Trigger: ATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGAC...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCCTGGATTATCTGGGTaGGGTCAATGTAATCACAAG +
Preference number: 2 (lower is better)
Translates to: GIFRVILDSLPFECLGYFPGLSG*GQCNHK
Trigger: CTTGTGATTACATTGACCCCACCCAGATAATCCAGG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAATAGGAACATTACCCTaGATTATCTGGGTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEIGTLP*IIWVGS
Trigger: TGACCCCACCCAGATAATCCAGGGTAATGTTCCTAT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTAACCTGACTCCTTTCTaGTTGTTTCACTCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: APKGIRYISLTCFMLLAANLTPF*LFHSCF
Trigger: AAAGCAGGAGTGAAACAACCAGAAAGGAGTCAGGTT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACAGGTTTGCTGTTTCATaGGACTCTATTTTAGTACTT +
Preference number: 2 (lower is better)
Translates to: DPAEMEEDPTTDVSISADRFAVS*DSILVL
Trigger: AAGTACTAAAATAGAGTCCCATGAAACAGCAAACCT...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 90 bp ATGTTATCTGGAATGAACAATGGTGGCTCATCTAAAGAAAAACTTTaGCTGCTTCTTCTTTGGCGGGGTTGTAGGTTCTTCTCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: MLSGMNNGGSSKEKL*LLLLWRGCRFFSGF
Trigger: AAAACCTGAGAAGAACCTACAACCCCGCCAAAGAAGAAGCAGCAAAAGTTTTTCTTTAGATGAGCCACCATTGTTCATTCCAGATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGAACTTTACAGGTACTaGGATGCCCTGGTACTTTTA +
Preference number: 2 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEELYRY*DALVLL
Trigger: TAAAAGTACCAGGGCATCTCAGTACCTGTAAAGTTC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAAGTTGCTCATCAGCTaGCCTGAAAATAGGAACATT +
Preference number: 2 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVKLLIS*PENRNI
Trigger: AATGTTCCTATTTTCAGGTCAGCTGATGAGCAACTT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAAAGAAGAAACTGCCTaGACCACACTCCCATCATAT +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCKEETA*TTLPSY
Trigger: ATATGATGGGAGTGTGGTTCAGGCAGTTTCTTCTTT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATGAGTACCTGGTTTTaGAGCTTTTTCTCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDMSTWF*SFFSCA
Trigger: TGCACAGGAGAAAAAGCTTCAAAACCAGGTACTCAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTATGAGTTATTTTGGTaGTTGGCCGTCGTTCCACTT +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDYELFW*LAVVPL
Trigger: AAGTGGAACGACGGCCAATCACCAAAATAACTCATA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTTCAGTTACTGGTGTaGAGCGAACCACACAAATTT +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLQLLV*SEPHKF
Trigger: AAATTTGTGTGGTTCGCTTCACACCAGTAACTGAAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTCCATCTTTGCTTTCTaGAGTAGTTACAGGCTGACT +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQSIFAF*SSYRLT
Trigger: AGTCAGCCTGTAACTACTTCAGAAAGCAAAGATGGA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGTCAGAGTACCAAATTaGGATGGTGTAAAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIVRVPN*DGVKVF
Trigger: GAAAACTTTTACACCATCGCAATTTGGTACTCTGAC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATCTAACCCCTGGAGATaGTCATCCCTAATAGAAAGC +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLSNPWR*SSLIES
Trigger: GCTTTCTATTAGGGATGAGCATCTCCAGGGGTTAGA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAAGATGGAATTTAAGTTaGTCATCAGCTGACCTGAAA +
Preference number: 2 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIRWNLS*SSADLK
Trigger: TTTCAGGTCAGCTGATGAGCAACTTAAATTCCATCT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATAACTAGGGACCGTTaGTATGAAGAAGGGATGATG +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDITRDR*YEEGMM
Trigger: CATCATCCCTTCTTCATACCAACGGTCCCTAGTTAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
3UTR-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATGGGCTTCTGATTCTTaGTCAAAAACTGCTCAACTA +
Preference number: 2 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVWASDS*SKTAQL
Trigger: TAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCCACAAAGATTACATaGGGTGAACTTTACAGGTAC +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDATKIT*GELYRY
Trigger: GTACCTGTAAAGTTCACCCCATGTAATCTTTGTGGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCACGTTAACATGGAGTaGCTTCACTTTTCACTCCAT +
Preference number: 2 (lower is better)
Translates to: GIFRVILDSLPFECLGYFHVNME*LHFSLH
Trigger: ATGGAGTGAAAAGTGAAGCCACTCCATGTTAACGTG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACACACACGTTAACATaGAGTGGCTTCACTTTTCAC +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTHTLT*SGFTFH
Trigger: GTGAAAAGTGAAGCCACTCCATGTTAACGTGTGTGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGACTACCAACAGGCTTaGCTTTACATTCCATCAAAG +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDDYQQA*LYIPSK
Trigger: CTTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTTGCTGCTTCTTCTTTaGCGGGGTTGTAGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYILLLLL*RGCRFF
Trigger: GAAGAACCTACAACCCCGCCAAAGAAGAAGCAGCAA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGGTAGCTATGTTATCTaGAATGAACAATGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDGSYVI*NEQWWL
Trigger: GAGCCACCATTGTTCATTCCAGATAACATAGCTACC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGATCTTCTTCAGTTACTaGTGTGAAGCGAACCACACA +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQIFFSY*CEANHT
Trigger: TGTGTGGTTCGCTTCACACCAGTAACTGAAGAAGAT...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACC +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIRHKRV*NFICGT
Trigger: GGTGCCACAGATAAAATTCCACACCCTCTTGTGCCT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 90 bp TTCCAAGCTTGCAGAATTGCCTTTACTTTTCTTCTGAATGCCTCATaGCAACTTCAGATGCTGGATGGTATTTGTTCCTATTTCTTCACA +
Preference number: 2 (lower is better)
Translates to: FQACRIAFTFLLNAS*QLQMLDGICSYFFT
Trigger: TGTGAAGAAATAGGAACAAATACCATCCAGCATCTGAAGTTGCAATGAGGCATTCAGAAGAAAAGTAAAGGCAATTCTGCAAGCTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 90 bp TATGTTTGGATTTTACACTTTTTGACTCTAAGTAAGAAACGCTACTaGACTGGCTGTTTCTGTCATCCTGAAGGTTTGCTGTTTCATGGG +
Preference number: 2 (lower is better)
Translates to: YVWILHFLTLSKKRY*TGCFCHPEGLLFHG
Trigger: CCCATGAAACAGCAAACCTTCAGGATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTACTTAGAGTCAAAAAGTGTAAAATCCAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTGATGACACTGAAGAATaGCTTGAAGACACTGATACT +
Preference number: 2 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLDDTEE*LEDTDT
Trigger: AGTATCAGTGTCTTCAAGTCATTCTTCAGTGTCATC...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTCACTGCCCTTTGAGTaGTTAGGCTATTTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVSLPFE*LGYFPQ
Trigger: TTGAGGGAAATAGCCTAAGCACTCAAAGGGCAGTGA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCCCGCTTCCTATTTTTaGTATCCTGGTGATAATGGT +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYPASYF*YPGDNG
Trigger: ACCATTATCACCAGGATAGCAAAAATAGGAAGCGGG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAAACGCAGAAAATTGTaGTTGCAGAATAGGCAGACA +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCKRRKL*LQNRQT
Trigger: TGTCTGCCTATTCTGCAAGCACAATTTTCTGCGTTT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTACAAAAGAAGAAACTaGCTGAACCACACTCCCATC +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYYKRRN*LNHTPI
Trigger: GATGGGAGTGTGGTTCAGGCAGTTTCTTCTTTTGTA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAGTGCAGAAGCCTGTTaGTTTTTGCTTATGAACCTT +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCSAEAC*FLLMNL
Trigger: AAGGTTCATAAGCAAAAAGCAACAGGCTTCTGCACT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAAGGAGCCAGGAATGTaGAGAGAATTTATAGGTACC +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLKEPGM*REFIGT
Trigger: GGTACCTATAAATTCTCTGCACATTCCTGGCTCCTT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTGGTTGTTTCACTCCTaGTTTAGCAGTAGATACAGT +
Preference number: 2 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQWLFHS*FSSRYS
Trigger: ACTGTATCTACTGCTAAAGCAGGAGTGAAACAACCA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGAAGCTTTTTGTTTTTaGACAGGTCTCTGTGTATCA +
Preference number: 2 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTEAFCF*TGLCVS
Trigger: TGATACACAGAGACCTGTGCAAAAACAAAAAGCTTC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509330.5
3UTR-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAACTTACCTATAAAGTaGGCTATAGCTGCACAGTGT +
Preference number: 2 (lower is better)
Translates to: GIFRVILDSLPFECLGYFNLPIK*AIAAQC
Trigger: ACACTGTGCAGCTATAGCCCACTTTATAGGTAAGTT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTACACCCCAATCCTTaGAACACCTGTAAATATGTT +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLHPNP*NTCKYV
Trigger: AACATATTTACAGGTGTTCCAAGGATTGGGGTGTAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTTCTATTCTCCTTATaGTACTCAGGTTTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLLFSL*YSGFSD
Trigger: GTCACTGAAACCTGAGTACCATAAGGAGAATAGAAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTCTCCAATGACTTATTaGCGGCTGGTTCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYISPMTY*RLVPES
Trigger: AGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAAGAAATCTGGAGTCTaGTATTCCCTCAACCAGATA +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLKKSGV*YSLNQI
Trigger: TATCTGGTTGAGGGAATATCAGACTCCAGATTTCTT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAAAGATTACATGGGGTaGACTTTACAGGTACTGAGA +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLKDYMG*TLQVLR
Trigger: TCTCAGTACCTGTAAAGTTCACCCCATGTAATCTTT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCCTTCACCTTTGAGTTaGCCAATGTTTATACTAAGT +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCPSPLS*PMFILS
Trigger: ACTTAGTATAAACATTGGTCAACTCAAAGGTGAAGG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGAGTGTAAGGGGTCTTaGAAACAAAAGTTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCECKGS*KQKFEN
Trigger: ATTCTCAAACTTTTGTTTTCAAGACCCCTTACACTC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTTACTGATACAATTGTaGACAGAACTTTCACTTCCC +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCLLIQL*TELSLP
Trigger: GGGAAGTGAAAGTTCTGTTCACAATTGTATCAGTAA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCATGGCAATAGAAAATaGACCTGTAGGTTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYHGNRK*TCRFSR
Trigger: CCTTGAAAACCTACAGGTTCATTTTCTATTGCCATG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAAGCCTGAATTCATCTaGTATAGTTATAATCCTCCC +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCKPEFI*YSYNPP
Trigger: GGGAGGATTATAACTATATCAGATGAATTCAGGCTT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTCCAGAATTGCAACTCTaGATCTTTGGCTCCTTATCA +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIPELQL*IFGSLS
Trigger: TGATAAGGAGCCAAAGATTCAGAGTTGCAATTCTGG...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR TCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTGTCGCTTCAGTTTCTaGCGAATAATTAAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYICRFSF*RIIKPN
Trigger: GTTGGGCTTAATTATTCGTCAGAAACTGAAGCGACA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGAATACACATTTCTGTaGAGATTCCAGTCTATACAA +
Preference number: 2 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVEYTFL*RFQSIQ
Trigger: TTGTATAGACTGGAATCTGCACAGAAATGTGTATTC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTTTCTTGCAGATGTTTaGCAGATTGGGCTGGAAATA +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYFLADV*QIGLEI
Trigger: TATTTCCAGCCCAATCTGGCAAACATCTGCAAGAAA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACATTGCAACTTCAGATaGTGGATGGTATTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLHCNFR*WMVFVP
Trigger: AGGAACAAATACCATCCAGCATCTGAAGTTGCAATG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCTGGGCTTCTGATTCTTaGTCAAAAACTGCTCAACTA +
Preference number: 2 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIWASDS*SKTAQL
Trigger: TAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCA...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTTCCAAAAGAAAAGTaGACCAAAGTTAAACGGGCT +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFPKEK*TKVKRA
Trigger: AGCCCGTTTAACTTTGGTCCACTTTTCTTTTGGAAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACTTGCAAAAGATAACTaGTTTGTGTTCACTTGCAGG +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLAKDN*FVFTCR
Trigger: CCTGCAAGTGAACACAAACCAGTTATCTTTTGCAAG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 90 bp TATCATTCTAGAAACTCTCCAAAAAGTAACTATAAACGGAAGTACTaGGCATATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCT +
Preference number: 2 (lower is better)
Translates to: YHSRNSPKSNYKRKY*AYNKSRKSWCRRLP
Trigger: AGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTATATGCCAAGTACTTCCGTTTATAGTTACTTTTTGGAGAGTTTCTAGAATGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCTATTAGCGAAGAGGTaGTCAAAAACTGACCTAAAA +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYLLAKR*SKTDLK
Trigger: TTTTAGGTCAGTTTTTGATCACCTCTTCGCTAATAG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATGGATCTACTACTCATTaGAAAATCTGCTCATTTTCC +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYGSTTH*KICSFS
Trigger: GGAAAATGAGCAGATTTTTCAATGAGTAGTAGATCC...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATTGGAAAGCAGTTACTaGTGTTGTTACCTGACATTT +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLESSY*CCYLTF
Trigger: AAATGTCAGGTAACAACAGCAGTAACTGCTTTCCAA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAGGATATATGCATTTTaGTCTGTGAGTGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCRIYAF*SVSGNK
Trigger: TTTGTTTCCACTCACAGAGCAAAATGCATATATCCT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATGGTTTGTGTTCACTTaGAGGCCACAAAGTATATTT +
Preference number: 2 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLWFVFT*RPQSIF
Trigger: AAATATACTTTGTGGCCTGCAAGTGAACACAAACCA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTCATTGTCTGAATGTTTaGGAGCTACTCCTACAACAA +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIHCLNV*ELLLQQ
Trigger: TTGTTGTAGGAGTAGCTCGCAAACATTCAGACAATG...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGATTATGAAGTTGCTTaGATTTTTGTTGCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDDYEVA*IFVAPL
Trigger: TAGAGGAGCAACAAAAATCCAAGCAACTTCATAATC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
3UTR-3UTR TCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTGGTACCTTCAAATTTaGGTCTGTAAGTCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIWYLQI*VCKSLH
Trigger: ATGAAGAGACTTACAGACTCAAATTTGAAGGTACCA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTACCTAATAGAGGTATaGATTCACTGTCTTAAGATG +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYYLIEV*IHCLKM
Trigger: CATCTTAAGACAGTGAATGCATACCTCTATTAGGTA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCTTGCAAAAGAAATCTaGAGTCTGATATTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLAKEI*SLIFPQ
Trigger: TTGAGGGAATATCAGACTCCAGATTTCTTTTGCAAG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCTACCTGGATCTAGATaGGATAAATGTAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYLPGSR*DKCNRK
Trigger: TTTTCTGTTACATTTATCCCATCTAGATCCAGGTAG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTTCTTCTTCATCAATaGTATCATTGCCACTTTCTT +
Preference number: 2 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVLLHQ*YHCHFL
Trigger: AAGAAAGTGGCAATGATACCATTGATGAAGAAGAAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGATTATGAAGTTGCTTaGATTTTTGTTGCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVDYEVA*IFVAPL
Trigger: TAGAGGAGCAACAAAAATCCAAGCAACTTCATAATC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTGATTATGAAGTTGCTTaGATTTTTGTTGCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPDYEVA*IFVAPL
Trigger: TAGAGGAGCAACAAAAATCCAAGCAACTTCATAATC...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCAATTGCTAAGCACATaGACTTTAGAGAAAAGAACT +
Preference number: 2 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVQLLST*TLEKRT
Trigger: AGTTCTTTTCTCTAAAGTCCATGTGCTTAGCAATTG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGAAGGTCTAATTGTATaGATGGGAATAGCTCAAAAT +
Preference number: 2 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVEGLIV*MGIAQN
Trigger: ATTTTGAGCTATTCCCATCCATACAATTAGACCTTC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTATATGGTCATCTTCATaGGATAATTTTACTGTCTCC +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIIWSSS*DNFTVS
Trigger: GGAGACAGTAAAATTATCCCATGAAGATGACCATAT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTATCAGCAATACCCATaGTATCCTTCAATTCCAAAT +
Preference number: 2 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIYQQYP*YPSIPN
Trigger: ATTTGGAATTGAAGGATACCATGGGTATTGCTGATA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATCAGGTGGCAATGCTATaGGTGGTGCACTTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNQVAML*VVHFQE
Trigger: CTCCTGAAAGTGCACCACCAATAGCATTGCCACCTG...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 72 bp CCCCTATTAAATGGCCTATCCAGTTGCTGTTGGTCTTaGCTACCCCAAGGGTCACTATGGCGCCTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: PLLNGLSSCCWS*LPQGSLWRLSG
Trigger: GCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGGCCATTTAATAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp AGTTGCTGTTGGTCTTGCCTACCCCAAGGGTCACTATaGCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGG +
Preference number: 3 (lower is better)
Translates to: SCCWSCLPQGSL*RLSGLRMSLTW
Trigger: CCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAGGTACCACTTCAATTaGTCCGCTATTTCGGCTGCA +
Preference number: 3 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNRYHFN*SAISAA
Trigger: TGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATCCTCCTGTAAGGGTTTaGCTTGTTCTGCTTGAGAAG +
Preference number: 3 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNPPVRV*LVLLEK
Trigger: CTTCTCAAGCAGAACAAGCAAAACCCTTACAGGAGG...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp CATACGCTGTGGCTGACCTGGGAGATGAACAACAGGTaGCCAGGGAACCATGGGATTTTGAGCAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: HTLWLTWEMNNR*PGNHGILSKAK
Trigger: TTTGGCTTTGCTCAAAATCCCATGGTTCCCTGGCCACCTGTTGTTCATCTCCCAGGTCAGCCACAGCGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTGTCATCCTGAAGGTTaGCTGTTTCATGGGACTCTA +
Preference number: 3 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNCHPEG*LFHGTL
Trigger: TAGAGTCCCATGAAACAGCAAACCTTCAGGATGACA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAAATCCAAACATGCTTaGTGGGGGAAAATTAGGAGG +
Preference number: 3 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNKSKHA*WGKIRR
Trigger: CCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp TCCAGGCATCTCTGGACGTGGAGCAGGAGAGAACGTTaGCTTTGGAGACTCCTGTTTCTCCTCCTCAAAGAA +
Preference number: 3 (lower is better)
Translates to: SRHLWTWSRRER*LWRLLFLLLKE
Trigger: TTCTTTGAGGAGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTCCACGTCCAGAGATGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp CCTTTACCCCTATTAAATGGCCTATCCAGTTGCTGTTaGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTT +
Preference number: 3 (lower is better)
Translates to: PLPLLNGLSSCC*SCLPQGSLWRL
Trigger: AAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGGCCATTTAATAGGGGTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACAAAACCCACACTGCTaGCTGGGAGTCCACATATAT +
Preference number: 3 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPQNPHC*LGVHIY
Trigger: ATATATGTGGACTCCCAGCAAGCAGTGTGGGTTTTG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGAATTCAACTGTAGCTaGGTTTTCCAAAGTATCTGG +
Preference number: 3 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNEFNCS*VFQSIW
Trigger: CCAGATACTTTGGAAAACCAAGCTACAGTTGAATTC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp GCTATTGGTGGTGCACTTTCAGGAGTCTCAGCTATATaGCTAGTACTAGCACAGGCACTGTGCTGTCGCTTC +
Preference number: 3 (lower is better)
Translates to: AIGGALSGVSAI*LVLAQALCCRF
Trigger: GAAGCGACAGCACAGTGCCTGTGCTAGTACTAGTCATATAGCTGAGACTCCTGAAAGTGCACCACCAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp CATGCTTTGTGGGGGAAAATTAGGAGGCCCTGGAAATaGAAATCCAGGTGGGCTAGACTTGAGATGCTGAAG +
Preference number: 3 (lower is better)
Translates to: HALWGKIRRPWK*KSRWARLEMLK
Trigger: CTTCAGCATCTCAAGTCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTTCCCCCACAAAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp GTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTaGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTG +
Preference number: 3 (lower is better)
Translates to: VLPTPRVTMAPF*PPNVFNLVKIL
Trigger: CAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 72 bp TGGTTGTGTCTTCTGACTCACACTGAACAGTTGGGTTaGTCAGTGAAGGGTTTCAGACAGTTCAGTGGAACG +
Preference number: 3 (lower is better)
Translates to: WLCLLTHTEQLG*SVKGFRQFSGT
Trigger: CGTTCCACTGAACTGTCTGAAACCCTTCACTGAGCAACCCAACTGTTCAGTGTGAGTCAGAAGACACAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp GGCCAGATACCGTTTTGGGTGCTGGGAATCAACTGTTaGACCAAACCAAACACAGACCCTGTTCTCATAAAG +
Preference number: 3 (lower is better)
Translates to: GQIPFWVLGINC*TKPNTDPVLIK
Trigger: CTTTATGAGAACAGGGTCTGTGTTTGGTTTGGTCCAACAGTTGATTCCCAGCACCCAAAACGGTATCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp GTTTTTCAGATCCTTCTGGCTTCTCCAATGACTTATTaGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: VFQILLASPMTY*RLVPESPWLLP
Trigger: AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGCCAGAAGGATCTGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TCCAAACATGCTTTGTGGGGGAAAATTAGGAGGCCCTaGAAATGGAAATCCAGGTGGGCTAGACTTGAGATG +
Preference number: 3 (lower is better)
Translates to: SKHALWGKIRRP*KWKSRWARLEM
Trigger: CATCTCAAGTCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTTCCCCCACAAAGCATGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTAGTAAGAAACGCTACTaGACTGGCTGTTTCTGTCAT +
Preference number: 3 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPSKKRY*TGCFCH
Trigger: ATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTACT...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCATCATTGTCTGAATGTTaGCGAGCTACTCCTACAACA +
Preference number: 3 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPSLSEC*RATPTT
Trigger: TGTTGTAGGAGTAGCTCGCAAACATTCAGACAATGA...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTCATTGCTGGGGCCTGTaGCTGAGGCTTATGACACTG +
Preference number: 3 (lower is better)
Translates to: APKGIRYISLTCFMLLAAHCWGL*LRLMTL
Trigger: CAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATG...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp ATGTCTTTGAGAGAATGTCTGACACTTTGCCTGATCTaGTCTGCAGAAGGCTTGGAAGCAGAAGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: MSLRECLTLCLI*SAEGLEAEAAG
Trigger: TCCTGCTGCTTCTGCTTCCAAGCCTTCTGCAGATCAGATCAGGCAAAGTGTCAGACATTCTCTCAAAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp TTCTCCATTCCGGCAACTATCTCCATCTTTGCTTTCTaGAGTAGTTACAGGCTGACTTCGTCCTGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: FSIPATISIFAF*SSYRLTSSCCL
Trigger: CAAGCAGCAGGACGAAGTCAGCCTGTAACTACTTCAGAAAGCAAAGATGGAGATAGTTGCCGGAATGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp AGTCAATCAGCGGTTACAAGATCTGCCTCTAACCCCTaGAGATGCTCATCCCTAATAGAAAGCTATATGGGC +
Preference number: 3 (lower is better)
Translates to: SQSAVTRSASNP*RCSSLIESYMG
Trigger: GCCCATATAGCTTTCTATTAGGGATGAGCATCTCCAGGGGTTAGAGGCAGATCTTGTAACCGCTGATTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp AATCAGAAGGGAAGGTCAGAGATACTAGAGAAAGACTaGGTCCCACACTGCTGGCTTCAAATATGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: NQKGRSEILEKD*VPHCWLQIWRK
Trigger: CTTCCTCCATATTTGAAGCCAGCAGTGTGGGACCCAGTCTTTCTCTAGTATCTCTGACCTTCCCTTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp AGCATCTATTTATGGGCCAGATACCGTTTTGGGTGCTaGGAATCAACTGTTGGACCAAACCAAACACAGACC +
Preference number: 3 (lower is better)
Translates to: SIYLWARYRFGC*ESTVGPNQTQT
Trigger: GGTCTGTGTTTGGTTTGGTCCAACAGTTGATTCCCAGCACCCAAAACGGTATCTGGCCCATAAATAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp AAGCTCTTCCTTCACGTGACTATTGGTTTTCATTGCTaGGGCCTGTTGCTGAGGCTTATGACACTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: KLFLHVTIGFHC*GLLLRLMTLFL
Trigger: CAGAAACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAGGAAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATCGACCTATGCAGATTTaGCAGTTGAGATCAAAAAGA +
Preference number: 3 (lower is better)
Translates to: APFWPPNVFNLVKILRAYRPMQI*QLRSKR
Trigger: TCTTTTTGATCTCAACTGCAAAATCTGCATAGGTCG...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp CTCTTTTTGTTTTTCAGATCCTTCTGGCTTCTCCAATaGCTTATTGGCGGCTGGTTCCTGAATCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: LFLFFRSFWLLQ*LIGGWFLNLHG
Trigger: GCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGCCAGAAGGATCTGAAAAACAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 72 bp GCCTTCACCTTTGAGTTGACCAATGTTTATACTAAGTaGTCAAAACCAGGGATGCCTTACAGAGGGCTCAAG +
Preference number: 3 (lower is better)
Translates to: AFTFELTNVYTK*SKPGMPYRGLK
Trigger: CTTGAGCCCTCTGTAAGGCATCCCTGGTTTTGAGCACTTAGTATAAACATTGGTCAACTCAAAGGTGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 72 bp CTCCCAGTCCACCACTGCAGGTTGGAAAGCAGTTACTaGTGTTGTTACCTGACATTTTCTGAGTTTGATATC +
Preference number: 3 (lower is better)
Translates to: LPVHHCRLESSY*CCYLTFSEFDI
Trigger: GATATCAAACTCAGAAAATGTCAGGTAACAACAGCAGTAACTGCTTTCCAACCTGCAGTGGTGGACTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 72 bp TTCAAGCTCTTCCTTCACGTGACTATTGGTTTTCATTaGTGGGGCCTGTTGCTGAGGCTTATGACACTGTTT +
Preference number: 3 (lower is better)
Translates to: FKLFLHVTIGFH*WGLLLRLMTLF
Trigger: AAACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAGGAAGAGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TTCAAGCCCAGGTCCATCAAAAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACCCAAAGGAATAAGGTA +
Preference number: 3 (lower is better)
Translates to: FKPRSIKRHKRV*NFICGTQRNKV
Trigger: TACCTTATTCCTTTGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTCCACCACTGCAGGTaGGAAAGCAGTTACTGCTGT +
Preference number: 3 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVHHCR*ESSYCC
Trigger: ACAGCAGTAACTGCTTTCCAACCTGCAGTGGTGGAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTGCTGCATTTGAACGCTaGGCAATAGTGCTCTGTCGC +
Preference number: 3 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLAAFER*AIVLCR
Trigger: GCGACAGAGCACTATTGCCAAGCGTTCAAATGCAGC...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTGACTATTGGTTTTCATaGCTGGGGCCTGTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: APKGIRYISLTCFMLLAADYWFS*LGPVAE
Trigger: CTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTC...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATATGCAGATTTTGCAGTaGAGATCAAAAAGATGCTGT +
Preference number: 3 (lower is better)
Translates to: APFWPPNVFNLVKILRAYMQILQ*RSKRCC
Trigger: ACAGCATCTTTTTGATCTCAACTGCAAAATCTGCAT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp AGGAGGCTTTCTGATTGCCACAAAGATTACATGGGGTaGACTTTACAGGTACTGAGATGCCCTGGTACTTTT +
Preference number: 3 (lower is better)
Translates to: RRLSDCHKDYMG*TLQVLRCPGTF
Trigger: AAAAGTACCAGGGCATCTCAGTACCTGTAAAGTTCACCCCATGTAATCTTTGTGGCAATCAGAAAGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 72 bp TTTAGCATCTATTTATGGGCCAGATACCGTTTTGGGTaGTGGGAATCAACTGTTGGACCAAACCAAACACAG +
Preference number: 3 (lower is better)
Translates to: FSIYLWARYRFG*WESTVGPNQTQ
Trigger: CTGTGTTTGGTTTGGTCCAACAGTTGATTCCCAGCACCCAAAACGGTATCTGGCCCATAAATAGATGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 72 bp CTTCAGGTACCACTTCAATTTGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTATGGTACTCAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: LQVPLQFVRYFG*TFYSPYGTQVS
Trigger: TGAAACCTGAGTACCATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 72 bp CACAACTTTTCCTCTACATTGATTTGTTCTGTTAAGTaGTCCTTGTTGTGTGACAGGCCAGGCAGCATGTGT +
Preference number: 3 (lower is better)
Translates to: HNFSSTLICSVK*SLLCDRPGSMC
Trigger: ACACATGCTGCCTGGCCTGTCACACAACAAGGAGCACTTAACAGAACAAATCAATGTAGAGGAAAAGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TGCTTGCCTAGGATCCCTTTTCAGGTTGATAAACTGTaGAGACCTCGCTGTATTAGCAACAAGGTTTTCACT +
Preference number: 3 (lower is better)
Translates to: CLPRIPFQVDKL*RPRCISNKVFT
Trigger: AGTGAAAACCTTGTTGCTAATACAGCGAGGTCTCCACAGTTTATCAACCTGAAAAGGGATCCTAGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TTGCTTTTAGTTCTGTCAGTGTGGTCCCTATCTTTGTaGTACCTATCCCTGTCCTTTTCTCCTTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: LLLVLSVWSLSL*YLSLSFSPSLC
Trigger: ACACAGAGAAGGAGAAAAGGACAGGGATAGGTACCACAAAGATAGGGACCACACTGACAGAACTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAACTCACACTGAACAGTaGGGTTGCTCAGTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCETHTEQ*GCSVKG
Trigger: ACCCTTCACTGAGCAACCCAACTGTTCAGTGTGAGT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp GCCACAAAGATTACATGGGGTGAACTTTACAGGTACTaGGATGCCCTGGTACTTTTACCTAATAGAGGTATG +
Preference number: 3 (lower is better)
Translates to: ATKITWGELYRY*DALVLLPNRGM
Trigger: CATACCTCTATTAGGTAAAAGTACCAGGGCATCTCAGTACCTGTAAAGTTCACCCCATGTAATCTTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp TCCAGTTTCCTCAGCTCTAAGCCTTCACCTTTGAGTTaGCCAATGTTTATACTAAGTGCTCAAAACCAGGGA +
Preference number: 3 (lower is better)
Translates to: SSFLSSKPSPLS*PMFILSAQNQG
Trigger: TCCCTGGTTTTGAGCACTTAGTATAAACATTGGTCAACTCAAAGGTGAAGGCTTAGAGCTGAGGAAACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp AAGTCTCCAGAAAATGAATGCATCTTGCTGACACCTTaGTCTTACCCAGTGAGATCTGCACAGACTTCTGAT +
Preference number: 3 (lower is better)
Translates to: KSPENECILLTP*SYPVRSAQTSD
Trigger: ATCAGAAGTCTGTGCAGATCTCACTGGGTAAGATCAAGGTGTCAGCAAGATGCATTCATTTTCTGGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp GATAATTTTGCCACTTGGCAACCGGCAACATATGACTaGCTTGGTGAACTAACAGGTAGAATAGGTCATCTG +
Preference number: 3 (lower is better)
Translates to: DNFATWQPATYD*LGELTGRIGHL
Trigger: CAGATGACCTATTCTACCTGTTAGTTCACCAAGTCAGTCATATGTTGCCGGTTGCCAAGTGGCAAAATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp GTACTAGCACAGGCACTGTGCTGTCGCTTCAGTTTCTaGCGAATAATTAAGCCCAACAATAGATTAGGTCTA +
Preference number: 3 (lower is better)
Translates to: VLAQALCCRFSF*RIIKPNNRLGL
Trigger: TAGACCTAATCTATTGTTGGGCTTAATTATTCGTCAGAAACTGAAGCGACAGCACAGTGCCTGTGCTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp GGAAGAGGTTTATTTGCTAATTCCAGAGTAGTAGGTTaGTTCTCCCAGCCAATCAACACGCCAGGAAGAAAT +
Preference number: 3 (lower is better)
Translates to: GRGLFANSRVVG*FSQPINTPGRN
Trigger: ATTTCTTCCTGGCGTGTTGATTGGCTGGGAGAATCAACCTACTACTCTGGAATTAGCAAATAAACCTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp GGAAATTCTGATGGACATGTGTTTCCAACTTCAAAATaGGATGTCGCTACTGCTGATCCTCTTCGAAATGGG +
Preference number: 3 (lower is better)
Translates to: GNSDGHVFPTSK*DVATADPLRNG
Trigger: CCCATTTCGAAGAGGATCAGCAGTAGCGACATCTCATTTTGAAGTTGGAAACACATGTCCATCAGAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp AATGGCACAACTTTTTCTTGCAGATGTTTGCCAGATTaGGCTGGAAATACATGTAACCAGTCTGTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: NGTTFSCRCLPD*AGNTCNQSVSC
Trigger: ACAGGACACAGACTGGTTACATGTATTTCCAGCCCAATCTGGCAAACATCTGCAAGAAAAAGTTGTGCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp AGAGCTGCCAAACATTCCAACCAGTCTAGAATGGCTTaGTATAGACCACAATGGAGAATAGAAGGAAAGAAC +
Preference number: 3 (lower is better)
Translates to: RAAKHSNQSRMA*YRPQWRIEGKN
Trigger: GTTCTTTCCTTCTATTCTCCATTGTGGTCTATACCAAGCCATTCTAGACTGGTTGGAATGTTTGGCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp TGTCCGCTATTTCGGCTGCACCTTCTATTCTCCTTATaGTACTCAGGTTTCAGTGACATACATACTTCTTCT +
Preference number: 3 (lower is better)
Translates to: CPLFRLHLLFSL*YSGFSDIHTSS
Trigger: AGAAGAAGTATGTATGTCACTGAAACCTGAGTACCATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TTTCAGTTTATCCTCTTCCTTAAAATGCTCAACGCCTaGGTGTTCAAGCTCTTCCTTCACGTGACTATTGGT +
Preference number: 3 (lower is better)
Translates to: FQFILFLKMLNA*VFKLFLHVTIG
Trigger: ACCAATAGTCACGTGAAGGAAGAGCTTGAACACCCAGGCGTTGAGCATTTTAAGGAAGAGGATAAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTTGCTTGGATTTTTGTaGCTCCTCTACAGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: DPAEMEEDPTTDVSISADLLGFL*LLYSFF
Trigger: AAAGAAACTGTAGAGGAGCAACAAAAATCCAAGCAA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCATCTTGCTGACACCTaGATCTTACCCAGTGAGATC +
Preference number: 3 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCHLADT*ILPSEI
Trigger: GATCTCACTGGGTAAGATCAAGGTGTCAGCAAGATG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTGGACTACCAACAGGCTaGGCTTTACATTCCATCAAA +
Preference number: 3 (lower is better)
Translates to: APKGIRYISLTCFMLLAAGLPTG*ALHSIK
Trigger: TTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTCC...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGACACAGACATATTCTTaGTCTTCCTCGCCCATCTGC +
Preference number: 3 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQTQTYS*SSSPIC
Trigger: GCAGATGGGCGAGGAAGACAAAGAATATGTCTGTGT...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTCCCGTTTTAAAATTTaGACCTTGTGCTTCACTGTA +
Preference number: 3 (lower is better)
Translates to: DPAEMEEDPTTDVSISADSRFKI*TLCFTV
Trigger: TACAGTGAAGCACAAGGTCAAAATTTTAAAACGGGA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR GCA 72 bp GGAGGTGAATGTACAGTAAATGGCACAACTTTTTCTTaGAGATGTTTGCCAGATTGGGCTGGAAATACATGT +
Preference number: 3 (lower is better)
Translates to: GGECTVNGTTFS*RCLPDWAGNTC
Trigger: ACATGTATTTCCAGCCCAATCTGGCAAACATCTGCAAGAAAAAGTTGTGCCATTTACTGTACATTCACCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 72 bp GGAGCCAGATACTGGATAGGCTTTGGTAACAAATTTTaGCACAGAAGGCATGTTGATAAAACCTTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: GARYWIGFGNKF*HRRHVDKTFPD
Trigger: ATCTGGAAAGGTTTTATCAACATGCCTTCTGTGGCAAAATTTGTTACCAAAGCCTATCCAGTATCTGGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TTACATGGGGTGAACTTTACAGGTACTGAGATGCCCTaGTACTTTTACCTAATAGAGGTATGCATTCACTGT +
Preference number: 3 (lower is better)
Translates to: LHGVNFTGTEMP*YFYLIEVCIHC
Trigger: ACAGTGAATGCATACCTCTATTAGGTAAAAGTACCAGGGCATCTCAGTACCTGTAAAGTTCACCCCATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGAAGCCTGTTGCTTTTaGCTTATGAACCTTGTAGAA +
Preference number: 3 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIEACCF*LMNLVE
Trigger: TTCTACAAGGTTCATAAGCAAAAAGCAACAGGCTTC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATGATTTTCTGGCAATaGGTCTCCATAATCAGACCT +
Preference number: 3 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIMIFWQ*VSIIRP
Trigger: AGGTCTGATTATGGAGACCAATTGCCAGAAAATCAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATCATTTTCTTACAGTaGCCTGTGTACTTTGGGTTG +
Preference number: 3 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIIIFLQ*PVYFGL
Trigger: CAACCCAAAGTACACAGGCAACTGTAAGAAAATGAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCAGTCTGTGTCCTGTTaGAATAATCTTTGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCQSVSC*NNLCLH
Trigger: GTGGAGGCAAAGATTATTCAAACAGGACACAGACTG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCAAAAGATAACTGGTTaGTGTTCACTTGCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCQKITG*CSLAGH
Trigger: GTGGCCTGCAAGTGAACACAAACCAGTTATCTTTTG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGAGAATGTCTGACACTTaGCCTGATCTGATCTGCAGA +
Preference number: 3 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQRMSDT*PDLICR
Trigger: TCTGCAGATCAGATCAGGCAAAGTGTCAGACATTCT...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTTTTTTGTGGCAACTTTaGCTGCCTTTTCCTCTGGTA +
Preference number: 3 (lower is better)
Translates to: APKGIRYISLTCFMLLAAFLWQL*LPFPLV
Trigger: TACCAGAGGAAAAGGCAGCAAAAGTTGCCACAAAAA...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACTGGTGATAATGGTGTaGACGATTTCCTATGTGAAA +
Preference number: 3 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVLVIMV*TISYVK
Trigger: TTTCACATAGGAAATCGTCAACACCATTATCACCAG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCGCAGAAAATTGTGCTaGCAGAATAGGCAGACAATA +
Preference number: 3 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCRRKLC*QNRQTI
Trigger: TATTGTCTGCCTATTCTGCAAGCACAATTTTCTGCG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAACTTCGCTACAACCTaGGCGACAGAACTATCATTC +
Preference number: 3 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLNFATT*ATELSF
Trigger: GAATGATAGTTCTGTCGCCAAGGTTGTAGCGAAGTT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp TCAGACAGTTCAGTGGAACGCAAAGAAAGAGGGCTATaGAAGGTATATATGATCATCAGGCTTTTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: SDSSVERKERGL*KVYMIIRLLLL
Trigger: AAGAAGCAAAAGCCTGATGATCATATATACCTTTCATAGCCCTCTTTCTTTGCGTTCCACTGAACTGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp ATTGGGGCATCACTCTCAATTTCTATTTCACCTTTATaGGTTATTTTGGTGATTGGCCGTCGTTCCACTTCT +
Preference number: 3 (lower is better)
Translates to: IGASLSISISPL*VILVIGRRSTS
Trigger: AGAAGTGGAACGACGGCCAATCACCAAAATAACTCATAAAGGTGAAATAGAAATTGAGAGTGATGCCCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAGTTGCTTGGATTTTaGTTGCTCCTCTACAGTTTC +
Preference number: 3 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKLLGF*LLLYSF
Trigger: GAAACTGTAGAGGAGCAACAAAAATCCAAGCAACTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
3UTR-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATGGAACTTTCCCATTTaGCTCATCATTGAATTCCAA +
Preference number: 3 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVWNFPI*LIIEFQ
Trigger: TTGGAATTCAATGATGAGCAAAATGGGAAAGTTCCA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATATATCTGTGATAATTTaGCCACTTGGCAACCGGCAA +
Preference number: 3 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYISVII*PLGNRQ
Trigger: TTGCCGGTTGCCAAGTGGCAAAATTATCACAGATAT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCAGGATATATGCATTTaGCTCTGTGAGTGGAAACAA +
Preference number: 3 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCQDICI*LCEWKQ
Trigger: TTGTTTCCACTCACAGAGCAAAATGCATATATCCTG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAGATGCTGTCTGTGTaGACTAGTGGTATCTTTAGA +
Preference number: 3 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKMLSV*TSGIFR
Trigger: TCTAAAGATACCACTAGTCAACACAGACAGCATCTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTTCCAGAGTAGTAGGTaGATTCTCCCAGCCAATCAA +
Preference number: 3 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIFQSSR*ILPANQ
Trigger: TTGATTGGCTGGGAGAATCAACCTACTACTCTGGAA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp TTAAGGTCACAGATGGAATTTAAGTTGCTCATCAGCTaGCCTGAAAATAGGAACATTACCCTGGATTATCTG +
Preference number: 3 (lower is better)
Translates to: LRSQMEFKLLIS*PENRNITLDYL
Trigger: CAGATAATCCAGGGTAATGTTCCTATTTTCAGGTCAGCTGATGAGCAACTTAAATTCCATCTGTGACCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp ATTTTGCAGTTGAGATCAAAAAGATGCTGTCTGTGTTaGCTAGTGGTATCTTTAGACATAGAGTCAACCTCC +
Preference number: 3 (lower is better)
Translates to: ILQLRSKRCCLC*LVVSLDIESTS
Trigger: GGAGGTTGACTCTATGTCTAAAGATACCACTAGTCAACACAGACAGCATCTTTTTGATCTCAACTGCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp TCATTCTCAATTCTCAGAGCACAATTGCTAAGCACATaGACTTTAGAGAAAAGAACTGAGCTAGGTAGGATT +
Preference number: 3 (lower is better)
Translates to: SFSILRAQLLST*TLEKRTELGRI
Trigger: AATCCTACCTAGCTCAGTTCTTTTCTCTAAAGTCCATGTGCTTAGCAATTGTGCTCTGAGAATTGAGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTGCTTGGATTTTTGTaGCTCCTCTACAGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLLGFL*LLYSFF
Trigger: AAAGAAACTGTAGAGGAGCAACAAAAATCCAAGCAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
3UTR-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAGTCAGAGTACCAAATaGCGATGGTGTAAAAGTTTT +
Preference number: 3 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCSQSTK*RWCKSF
Trigger: AAAACTTTTACACCATCGCAATTTGGTACTCTGACT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR TCA 72 bp TTAGTAAGTTGTAGCCTGACCAGTGTTACAGGGATCTaGGATAAGCATAGTACAACTAGTATATCCAAATGT +
Preference number: 3 (lower is better)
Translates to: LVSCSLTSVTGI*DKHSTTSISKC
Trigger: ACATTTGGATATACTAGTTGTACTATGCTTATCTCAGATCCCTGTAACACTGGTCAGGCTACAACTTACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp AGAGGGAGAAGAAAATGTTTCGTGGAGACTTCTGCGTaGTTCATTATTAATAAGTCATTTTGCTATCCTCTT +
Preference number: 3 (lower is better)
Translates to: RGRRKCFVETSA*FIINKSFCYPL
Trigger: AAGAGGATAGCAAAATGACTTATTAATAATGAACCACGCAGAAGTCTCCACGAAACATTTTCTTCTCCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp CTAGAAATATCAGAAGATCCAGCGTCCTCAAGAATATaGTCATCTTCATGGGATAATTTTACTGTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: LEISEDPASSRI*SSSWDNFTVSF
Trigger: AAAGGAGACAGTAAAATTATCCCATGAAGATGACCATATTCTTGAGGACGCTGGATCTTCTGATATTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CCA 72 bp ACTAGGCAAACCTACAAGGCTGTTTTCTGTCTTATTTaGATTTGTACAAGCAGCATCACTAGAAATATCAGA +
Preference number: 3 (lower is better)
Translates to: TRQTYKAVFCLI*ICTSSITRNIR
Trigger: TCTGATATTTCTAGTGATGCTGCTTGTACAAATCCAAATAAGACAGAAAACAGCCTTGTAGGTTTGCCTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATTGCTTGGATTTTTGTaGCTCCTCTACAGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLLGFL*LLYSFF
Trigger: AAAGAAACTGTAGAGGAGCAACAAAAATCCAAGCAA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTAAGTTGCTTGGATTTTaGTTGCTCCTCTACAGTTTC +
Preference number: 3 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVKLLGF*LLLYSF
Trigger: GAAACTGTAGAGGAGCAACAAAAATCCAAGCAACTT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATATGATCATCAGGCTTTaGCTTCTTTTTCTCATTCTC +
Preference number: 3 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYMIIRL*LLFLIL
Trigger: GAGAATGAGAAAAAGAAGCAAAAGCCTGATGATCAT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTATTTCTTTGATACATaGCTTACGGGGAATCAACTG +
Preference number: 3 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYYFFDT*LTGNQL
Trigger: CAGTTGATTCCCCGTAAGCAATGTATCAAAGAAATA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTGCTTTTCACACTCCATaGTTTTATCTCCACTATGGA +
Preference number: 3 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIAFHTP*FYLHYG
Trigger: TCCATAGTGGAGATAAAACAATGGAGTGTGAAAAGC...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR TCA 72 bp TTCTTTAAATCTTGTAAATCCCATGGCAATAGAAAATaGACCTGTAGGTTTTCAAGGCTGTATCCGACAAGT +
Preference number: 3 (lower is better)
Translates to: FFKSCKSHGNRK*TCRFSRLYPTS
Trigger: ACTTGTCGGATACAGCCTTGAAAACCTACAGGTTCATTTTCTATTGCCATGGGATTTACAAGATTTAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CCA 72 bp CTCCATCAAATTTTGCTGAAAAACTGTGACCTAAACTaGTATTGCTCCATACTATTGCATTTAACTTTGGAG +
Preference number: 3 (lower is better)
Translates to: LHQILLKNCDLN*YCSILLHLTLE
Trigger: CTCCAAAGTTAAATGCAATAGTATGGAGCAATACCAGTTTAGGTCACAGTTTTTCAGCAAAATTTGATGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR GCA 72 bp CAAATTTTGCTGAAAAACTGTGACCTAAACTGGTATTaGTCCATACTATTGCATTTAACTTTGGAGATACTC +
Preference number: 3 (lower is better)
Translates to: QILLKNCDLNWY*SILLHLTLEIL
Trigger: GAGTATCTCCAAAGTTAAATGCAATAGTATGGAGCAATACCAGTTTAGGTCACAGTTTTTCAGCAAAATTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACAGCCGCCGCCGCCCTaGGCCCGAAGGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIQPPPP*ARRSLA
Trigger: GGCAAGCGACCTTCGGGCTCAGGGCGGCGGCGGCTG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGCCTGGTCATATACTTaGCCAGTGGTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNAWSYT*PVVPKR
Trigger: CCTTTTGGGCACCACTGGTCAAGTATATGACCAGGC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTCCCCAAGGGTCACTATaGCGCCTTTCTGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPPQGSL*RLSGLR
Trigger: TCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGG...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATCTGACTTCGTCCTGCTaGTTGCCTAGGATCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNLTSSC*LPRIPF
Trigger: AAAAGGGATCCTAGGCAAGCAGCAGGACGAAGTCAG...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTCCGGATCCGGGGGCCTaGGAGACGGGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTPDPGA*ETGLPG
Trigger: GCCTGGAAGGCCCGTCTCGCAGGCCCCCGGATCCGG...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTCTAGACTTGAGATGCTaGAGGTTGGGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPLDLRC*RLGCCG
Trigger: GCCACAGCAGCCCAACCTTCAGCATCTCAAGTCTAG...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp ACCCCTATTAAATGGCCTATCCAGTTGCTGTTGGTCTaGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPIKWPIQLLLV*PTPRVTMAPFW
Trigger: CCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGGCCATTTAATAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp CCCTTTACCCCTATTAAATGGCCTATCCAGTTGCTGTaGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PFTPIKWPIQLL*VLPTPRVTMAP
Trigger: AGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGGCCATTTAATAGGGGTAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAGGTCGCTTGCCGCGTaGGGACGGTGCGACGGCGCG +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYRSLAA*GRCDGA
Trigger: CGCGCCGTCGCACCGTCCCCACGCGGCAAGCGACCT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAAAATTAGGAGGCCCTaGAAATGGAAATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNKIRRP*KWKSRW
Trigger: CCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTGGAGGTGGCAAATGTaGTGGAAATCCAAACATGCT +
Preference number: 4 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNWRWQM*WKSKHA
Trigger: AGCATGTTTGGATTTCCACCACATTTGCCACCTCCA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTTGGCGGCTGGTTCCTaGATCTCCATGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADLAAGS*ISMAAS
Trigger: GGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCGGCGGCGCGGGAGCTaGAGAGGGGCCGTGTCACGT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVRRRGS*RGAVSR
Trigger: ACGTGACACGGCCCCTCTCCAGCTCCCGCGCCGCCG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp TTCCAGGCATCTCTGGACGTGGAGCAGGAGAGAACGTaGACTTTGGAGACTCCTGTTTCTCCTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FQASLDVEQERT*TLETPVSPPQR
Trigger: TCTTTGAGGAGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTCCACGTCCAGAGATGCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGCATGCTGGGGCTCCCTaGGAAGGAAGAGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQHAGAP*EGRGPN
Trigger: GTTGGGGCCTCTTCCTTCTCAGGGAGCCCCAGCATG...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAGCCCGAAGGTCGCTTaGCGCGTGGGGACGGTGCGA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLSPKVA*RVGTVR
Trigger: TCGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATAATGGCCTATCCAGTTaGTGTTGGTCTTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYNGLSS*CWSCLP
Trigger: GGGTAGGCAAGACCAACAGCAACTGGATAGGCCATT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACTGTCTCTGCGTCTATaGCTTTCAGATTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPLSLRL*LSDSCS
Trigger: GGAGCAAGAATCTGAAAGGCATAGACGCAGAGACAG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCCTCCTGGGACCAAATaGCTGCTGCTGACGACACTA +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTPPGTK*LLLTTL
Trigger: TAGTGTCGTCAGCAGCAGCCATTTGGTCCCAGGAGG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGCAGCAAGAGGAAGATaGTGGACGCTGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEAARGR*WTLPPP
Trigger: CGGCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTDERYH*QQEEDG
Trigger: ACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATGTGGCCAGGGAACCATaGGATTTTGAGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYVAREP*DFEQSQ
Trigger: TTGGCTTTGCTCAAAATCCCATGGTTCCCTGGCCAC...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp GCATCTCTGGACGTGGAGCAGGAGAGAACGTTGACTTaGGAGACTCCTGTTTCTCCTCCTCAAAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: ASLDVEQERTLT*ETPVSPPQRIQ
Trigger: CTGAATTCTTTGAGGAGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTCCACGTCCAGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACCAACACAATCACCATaGAACCAGTCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPPTQSP*NQSSHL
Trigger: GAGATGTGATGACTGGTTTCATGGTGATTGTGTTGG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTGTGCCCAAAAGGCTTTaGAGTATATCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPVPKRL*SISSTG
Trigger: TCCTGTGGATGATATACTTCAAAGCCTTTTGGGCAC...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCTCCTAATCCTCGTTaGAGCCGCCGCCGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPPNPR*SRRRPE
Trigger: CTCAGGGCGGCGGCGGCTGCAACGAGGATTAGGAGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACCTACTATCTCTGCTTaGTTTTCCATCTGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPPTISA*FSICSS
Trigger: CGAGGAACAGATGGAAAAGCAAGCAGAGATAGTAGG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACAGGTTGATAAACTGTaGAGACCTCGCTGTATTAGC +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPQVDKL*RPRCIS
Trigger: GCTAATACAGCGAGGTCTCCACAGTTTATCAACCTG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTAAATGGAAATCCAGGTaGGCTAGACTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPKWKSR*ARLEML
Trigger: CAGCATCTCAAGTCTAGCCCACCTGGATTTCCATTT...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACAGGAGGCCCTGGAAATaGAAATCCAGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADRRPWK*KSRWAR
Trigger: TCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCT...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTACCCATCATACGCTGTaGCTGACCTGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTTHHTL*LTWEMN
Trigger: GTTCATCTCCCAGGTCAGCCACAGCGTATGATGGGT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCTATCCAGTTGCTGTTaGTCTTGCCTACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTLSSCC*SCLPQG
Trigger: CCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp GGGCCAGATACCGTTTTGGGTGCTGGGAATCAACTGTaGGACCAAACCAAACACAGACCCTGTTCTCATAAA +
Preference number: 4 (lower is better)
Translates to: GPDTVLGAGNQL*DQTKHRPCSHK
Trigger: TTTATGAGAACAGGGTCTGTGTTTGGTTTGGTCCAACAGTTGATTCCCAGCACCCAAAACGGTATCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCCAAATGGCTGCTGCTaGCGACACTATTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTPNGCC*RHYSWL
Trigger: AAGCCAAGAATAGTGTCGTCAGCAGCAGCCATTTGG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTCCAGAATTGCAACTCTaGATCTTTGGCTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPPELQL*IFGSLS
Trigger: TGATAAGGAGCCAAAGATTCAGAGTTGCAATTCTGG...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTATCTCTTGCTTCTCATaGGTACCTGGTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPISCFS*VPGFEA
Trigger: AGCTTCAAAACCAGGTACTCATGAGAAGCAAGAGAT...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTTCTGGCTTCTCCAATaGCTTATTGGCGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADFWLLQ*LIGGWF
Trigger: GAACCAGCCGCCAATAAGTCATTGGAGAAGCCAGAA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAGATACTCGGGAAACTaGGGCAGCCCGGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVRYSGN*GSPGDG
Trigger: TCCATCTCCCGGGCTGCCTCAGTTTCCCGAGTATCT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTGAGGATCAAGTGAGATaGTGTATGAGAACTCACTCT +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPEDQVR*CMRTHS
Trigger: AGAGTGAGTTCTCATACATCATCTCACTTGATCCTC...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGAAGATGGTGGACGCTaGCGCCGCCGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLEDGGR*RRRRGG
Trigger: TCCTCCTCTTCGGCGGCGGCAGCGTCCACCATCTTC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATAGTCTGATGAATTTCTaGCTTCACCAGACTCCCGTT +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYSLMNF*LHQTPV
Trigger: AACGGGAGTCTGGTGAAGGCAGAAATTCATCAGACT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTTTGGTAACAAATTTTaGCACAGAAGGCATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNFGNKF*HRRHVD
Trigger: ATCAACATGCCTTCTGTGGCAAAATTTGTTACCAAA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTACTCGTCAAAGACCCTaGAGAAATGGAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTTRQRP*RNGRGP
Trigger: GGGTCCTCTTCCATTTCTGCAGGGTCTTTGACGAGT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAGCAGGAAGAGTTGGTaGAGAAGGCTACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTSRKSW*RRLPGS
Trigger: AGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGCAAGAGGAAGATGGTaGACGCTGCCGCCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNARGRW*TLPPPK
Trigger: CTTCGGCGGCGGCAGCGTCCACCATCTTCCTCTTGC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTCTTCATTCTCCAGGTTaGATCCTAGAAATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPLHSPG*ILEIGH
Trigger: ATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAG...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTAACCTGACTCCTTTCTaGTTGTTTCACTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPNLTPF*LFHSCF
Trigger: AAAGCAGGAGTGAAACAACCAGAAAGGAGTCAGGTT...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAGACTACCAACAGGCTTaGCTTTACATTCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPDYQQA*LYIPSK
Trigger: CTTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTC...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTATCAGCAATACCCATaGTATCCTTCAATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNYQQYP*YPSIPN
Trigger: ATTTGGAATTGAAGGATACCATGGGTATTGCTGATA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATGTTCCTGAATCTCCATaGCTGCTTCCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYVPESP*LLPVLS
Trigger: TGAAAGAACAGGAAGCAGCCATGGAGATTCAGGAAC...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATTGGGGAGCCAGATACTaGATAGGCTTTGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYWGARY*IGFGNK
Trigger: TTTGTTACCAAAGCCTATCCAGTATCTGGCTCCCCA...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCCCCAAGGGTCACTATaGCGCCTTTCTGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDPQGSL*RLSGLR
Trigger: TCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCATTAGTTCTGTCAGTGTaGTCCCTATCTTTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPLVLSV*SLSLWY
Trigger: GTACCACAAAGATAGGGACCACACTGACAGAACTAA...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTATAGCAGAACAAAGGTaGGAGAAGCCTCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTIAEQR*EKPQPW
Trigger: CCATGGCTGAGGCTTCTCCCACCTTTGTTCTGCTAT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATTGGCGGCTGGTTCCTaGATCTCCATGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCELAAGS*ISMAAS
Trigger: GGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGTTTTGTTCCATCACTaGCTGGGCCTGGTCATATAC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTVLFHH*LGLVIY
Trigger: GTATATGACCAGGCCCAGTCAGTGATGGAACAAAAC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCCAAGTCTTCATAGTTaGTCCTCTGCTAAGAGGACC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTPSLHS*SSAKRT
Trigger: GGTCCTCTTAGCAGAGGATCAACTATGAAGACTTGG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAAGGAGTCCACAGTTTaGGTCCCGGGCACAAAAGCG +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQKESTV*VPGTKA
Trigger: CGCTTTTGTGCCCGGGACTCAAACTGTGGACTCCTT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGGACGTCGGCGTCGCTaGCACAGCCTCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVGRRRR*HSLFSS
Trigger: GGAGGAAAAGAGGCTGTGGCAGCGACGCCGACGTCC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACATTGTCTGAATGTTTaGGAGCTACTCCTACAACAA +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPHCLNV*ELLLQQ
Trigger: TTGTTGTAGGAGTAGCTCGCAAACATTCAGACAATG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACCGAGATTGCACCATTaGACTCCAGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVPRLHH*TPAWGT
Trigger: TGTCCCCCAAGCTGGAGTGCAATGGTGCAATCTCGG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCAGCGTCCTCAAGAATATaGTCATCTTCATGGGATAAT +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPASSRI*SSSWDN
Trigger: ATTATCCCATGAAGATGACCATATTCTTGAGGACGC...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATGGTAGCTATGTTATCTaGAATGAACAATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYGSYVI*NEQWWL
Trigger: GAGCCACCATTGTTCATTCCAGATAACATAGCTACC...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTTTCCTGTTCTTTCATTaGGGCATCACTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPFLFFH*GITLNF
Trigger: GAAATTGAGAGTGATGCCCCAATGAAAGAACAGGAA...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACACTATGGCGCCTTTCTaGCCTCCGAATGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADTMAPF*PPNVFN
Trigger: GTTAAAGACATTCGGAGGCCAGAAAGGCGCCATAGT...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCCCAAGGGTCACTATaGCGCCTTTCTGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPQGSL*RLSGLR
Trigger: TCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCATTTACCCCTATTAAATaGCCTATCCAGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPFTPIK*PIQLLL
Trigger: CAACAGCAACTGGATAGGCCATTTAATAGGGGTAAA...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp CTTCACGTGACTATTGGTTTTCATTGCTGGGGCCTGTaGCTGAGGCTTATGACACTGTTTCTGGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: LHVTIGFHCWGL*LRLMTLFLARM
Trigger: CATTCTAGCCAGAAACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp GTTCAAGCTCTTCCTTCACGTGACTATTGGTTTTCATaGCTGGGGCCTGTTGCTGAGGCTTATGACACTGTT +
Preference number: 4 (lower is better)
Translates to: VQALPSRDYWFS*LGPVAEAYDTV
Trigger: AACAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTCACGTGAAGGAAGAGCTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp TGGAGGTGGCAAATGTGGTGGAAATCCAAACATGCTTaGTGGGGGAAAATTAGGAGGCCCTGGAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: WRWQMWWKSKHA*WGKIRRPWKWK
Trigger: TTTCCATTTCCAGGGCCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTTCCACCACATTTGCCACCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATACTTCTTCTTTAACCTaGCTCCTTTCTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYTSSLT*LLSGCF
Trigger: GAAACAACCAGAAAGGAGTCAGGTTAAAGAAGAAGT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTGGCGGCTGGTTCCTaGATCTCCATGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLAAGS*ISMAAS
Trigger: GGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACGTGGCTCCTGTTTGGTaGCTTCCATTAAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADVAPVW*LPLKVQ
Trigger: TTGAACCTTTAATGGAAGTCACCAAACAGGAGCCAC...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGTGCCCAAAAGGCTTTaGAGTATATCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTVPKRL*SISSTG
Trigger: TCCTGTGGATGATATACTTCAAAGCCTTTTGGGCAC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCTAGACTTGAGATGCTaGAGGTTGGGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCLDLRC*RLGCCG
Trigger: GCCACAGCAGCCCAACCTTCAGCATCTCAAGTCTAG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTAGACTTGAGATGCTaGAGGTTGGGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLDLRC*RLGCCG
Trigger: GCCACAGCAGCCCAACCTTCAGCATCTCAAGTCTAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGGCTGACTTCGTCCTaGTGCTTGCCTAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFRLTSS*CLPRIP
Trigger: AGGGATCCTAGGCAAGCAGCAGGACGAAGTCAGCCT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTCACTGCCCTTTGAGTaGTTAGGCTATTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTSLPFE*LGYFPQ
Trigger: TTGAGGGAAATAGCCTAAGCACTCAAAGGGCAGTGA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACCGGGAGATGGAGGTTaGAGTGAGCCGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLPGDGG*SEPRLH
Trigger: GTGCAATCTCGGCTCACTGCAACCTCCATCTCCCGG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTCTCCAATGACTTATTaGCGGCTGGTTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTSPMTY*RLVPES
Trigger: AGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAAATGGAAATCCAGGTaGGCTAGACTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTKWKSR*ARLEML
Trigger: CAGCATCTCAAGTCTAGCCCACCTGGATTTCCATTT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGAGATGAACAACAGGTaGCCAGGGAACCATGGGATT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIEMNNR*PGNHGI
Trigger: AATCCCATGGTTCCCTGGCCACCTGTTGTTCATCTC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACGCTGTGGCTGACCTaGGAGATGAACAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTLWLT*EMNNRW
Trigger: CCACCTGTTGTTCATCTCCCAGGTCAGCCACAGCGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTCTATCCAGTTGCTGTTaGTCTTGCCTACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAALSSCC*SCLPQG
Trigger: CCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAG...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAACATTGCACTCCAGCTTaGGGGACAGAGCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEHCTPA*GTEQDS
Trigger: AGAGTCCTGCTCTGTCCCCCAAGCTGGAGTGCAATG...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTCCAAACTGTCTGAGGTaGTATCCTGCCACCTACTTG +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAPNCLR*YPATYL
Trigger: CAAGTAGGTGGCAGGATATCACCTCAGACAGTTTGG...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTCTTCGTCCTGCTGCTTaGCTAGGATCCCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLLRPAA*LGSLFR
Trigger: CCTGAAAAGGGATCCTAGGCAAGCAGCAGGACGAAG...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGCTGACTTCGTCCTaGTGCTTGCCTAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRLTSS*CLPRIP
Trigger: AGGGATCCTAGGCAAGCAGCAGGACGAAGTCAGCCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCGCTCAAAACCAGGGATaGCTTACAGAGGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFAQNQG*LTEGSR
Trigger: CCTTGAGCCCTCTGTAAGGCATCCCTGGTTTTGAGC...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCAGTGAGCCGAGATTaGACCATTGCACTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDAVSRD*TIALQL
Trigger: AAGCTGGAGTGCAATGGTGCAATCTCGGCTCACTGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTAGGTTTGCTGTTTCATaGGACTCTATTTTAGTACTT +
Preference number: 4 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPRFAVS*DSILVL
Trigger: AAGTACTAAAATAGAGTCCCATGAAACAGCAAACCT...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGGAGGCCCTGGAAATaGAAATCCAGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDRRPWK*KSRWAR
Trigger: TCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATACGCTGTGGCTGACCTaGGAGATGAACAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYTLWLT*EMNNRW
Trigger: CCACCTGTTGTTCATCTCCCAGGTCAGCCACAGCGT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACCCATCATACGCTGTaGCTGACCTGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTHHTL*LTWEMN
Trigger: GTTCATCTCCCAGGTCAGCCACAGCGTATGATGGGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTATCCAGTTGCTGTTaGTCTTGCCTACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLSSCC*SCLPQG
Trigger: CCCTTGGGGTAGGCAAGACCAACAGCAACTGGATAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTAGTTGAGGTGGAATaGGGTGGCGGAGTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLVEVE*GGGVFL
Trigger: TAGGAACACTCCGCCACCCCATTCCACCTCAACTAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTCAGCCATGGTTGAGTaGGCATTAAATAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTSAMVE*ALNSQS
Trigger: ACTTTGGCTATTTAATGCCCACTCAACCATGGCTGA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp TCCTCTACATTGATTTGTTCTGTTAAGTGCTCCTTGTaGTGTGACAGGCCAGGCAGCATGTGTTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSTLICSVKCSL*CDRPGSMCFSP
Trigger: TGGAGAAAAACACATGCTGCCTGGCCTGTCACACAACAAGGAGCACTTAACAGAACAAATCAATGTAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAAGACCAACAACTGTTaGACAAGGCATCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTKTNNC*TRHLEI
Trigger: AATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACCTCACCCGTTTTACCTaGAATGGAATCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADLTRFT*NGIILF
Trigger: GAACAAAATGATTCCATTTCAGGTAAAACGGGTGAG...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTTTCAAGCAACCAGGATaGGCGTGTGACTTATCACTC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTFKQPG*ACDLSL
Trigger: GAGTGATAAGTCACACGCTCATCCTGGTTGCTTGAA...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCCAAACTGTCTGAGGTaGTATCCTGCCACCTACTTG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDPNCLR*YPATYL
Trigger: CAAGTAGGTGGCAGGATATCACCTCAGACAGTTTGG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATCCAGAGTAGTAGGTTaGTTCTCCCAGCCAATCAAC +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVSRVVG*FSQPIN
Trigger: GTTGATTGGCTGGGAGAATCAACCTACTACTCTGGA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGCCTGGTCATATACTTaGCCAGTGGTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNAWSYT*PVVPKR
Trigger: CCTTTTGGGCACCACTGGTCAAGTATATGACCAGGC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGAAGTAGTTACAGGCTaGCTTCGTCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNEVVTG*LRPAAC
Trigger: GCAAGCAGCAGGACGAAGTCAGCCTGTAACTACTTC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAAGAAATCTGGAGTCTaGTATTCCCTCAACCAGATA +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTKKSGV*YSLNQI
Trigger: TATCTGGTTGAGGGAATATCAGACTCCAGATTTCTT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGATGGAGGTTGCAGTaGGCCGAGATTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRWRLQ*AEIAPL
Trigger: CAATGGTGCAATCTCGGCTCACTGCAACCTCCATCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTATTGGTTTTCATTaGTGGGGCCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQTIGFH*WGLLLR
Trigger: CCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGTTGCAAAACCCACACTaGTTGCTGGGAGTCCACATA +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQLQNPH*LLGVHI
Trigger: TATGTGGACTCCCAGCAAGCAGTGTGGGTTTTGCAA...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATCATCTACAGGTGGTaGCATTCGACCTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIIIYRW*HSTYAD
Trigger: ATCTGCATAGGTCGAATGGCACCACCTGTAGATGAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTCTGAGGTGATATCCTaGCACCTACTTGAATACTAT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTSEVIS*HLLEYY
Trigger: ATAGTATTCAAGTAGGTGGCAGGATATCACCTCAGA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACTTCGTCCTGCTGCTTaGCTAGGATCCCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLRPAA*LGSLFR
Trigger: CCTGAAAAGGGATCCTAGGCAAGCAGCAGGACGAAG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTTCGTCCTGCTGCTTaGCTAGGATCCCTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLRPAA*LGSLFR
Trigger: CCTGAAAAGGGATCCTAGGCAAGCAGCAGGACGAAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAACTGACTTCGTCCTGCTaGTTGCCTAGGATCCCTTTT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCELTSSC*LPRIPF
Trigger: AAAAGGGATCCTAGGCAAGCAGCAGGACGAAGTCAG...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTAGGCTGACTTCGTCCTaGTGCTTGCCTAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIRLTSS*CLPRIP
Trigger: AGGGATCCTAGGCAAGCAGCAGGACGAAGTCAGCCT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCCTCTTCGAAATGGGTaGACAGTTTCAATATTTTGC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTPLRNG*TVSIFC
Trigger: GCAAAATATTGAAACTGTGCACCCATTTCGAAGAGG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGTTGCTGTTGGTCTTaGCTACCCCAAGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSCCWS*LPQGSL
Trigger: TAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAATGGCCTATCCAGTTaGTGTTGGTCTTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDNGLSS*CWSCLP
Trigger: GGGTAGGCAAGACCAACAGCAACTGGATAGGCCATT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACCATTCCTACTATCTCTaGTTGCTTTTCCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADHSYYL*LLFHLF
Trigger: GAACAGATGGAAAAGCAAGCAGAGATAGTAGGAATG...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAAACGCAGAAAATTGTaGTTGCAGAATAGGCAGACA +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTKRRKL*LQNRQT
Trigger: TGTCTGCCTATTCTGCAAGCACAATTTTCTGCGTTT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATATATGGTCATCTTCATaGGATAATTTTACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: APFWPPNVFNLVKILRAYIWSSS*DNFTVS
Trigger: GGAGACAGTAAAATTATCCCATGAAGATGACCATAT...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAATTGGTTTTCATTGCTaGGGCCTGTTGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVIGFHC*GLLLRL
Trigger: AAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAAT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTATTGGTTTTCATTGCTaGGGCCTGTTGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTIGFHC*GLLLRL
Trigger: AAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAAT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGTTGCTGCTTCTTCTTTaGCGGGGTTGTAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQLLLLL*RGCRFF
Trigger: GAAGAACCTACAACCCCGCCAAAGAAGAAGCAGCAA...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGATCTGCAGAAGGCTTaGAAGCAGAAGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEDLQKA*KQKQQD
Trigger: ATCCTGCTGCTTCTGCTTCCAAGCCTTCTGCAGATC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTTCCTGTTCTTTCATTaGGGCATCACTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTFLFFH*GITLNF
Trigger: GAAATTGAGAGTGATGCCCCAATGAAAGAACAGGAA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTAGTTTGTACTTGTTCTaGGGCTGGTGCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAASLYLF*GWCFWK
Trigger: CTTCCAGAAGCACCAGCCCCAGAACAAGTACAAACT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGAGGCCCTGGAAATaGAAATCCAGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRRPWK*KSRWAR
Trigger: TCTAGCCCACCTGGATTTCCATTTCCAGGGCCTCCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTGGCCAGGGAACCATaGGATTTTGAGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVAREP*DFEQSQ
Trigger: TTGGCTTTGCTCAAAATCCCATGGTTCCCTGGCCAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGGAGATGAACAACAGGTaGCCAGGGAACCATGGGATT +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQEMNNR*PGNHGI
Trigger: AATCCCATGGTTCCCTGGCCACCTGTTGTTCATCTC...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTACGCTGTGGCTGACCTaGGAGATGAACAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPTLWLT*EMNNRW
Trigger: CCACCTGTTGTTCATCTCCCAGGTCAGCCACAGCGT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCACCCATCATACGCTGTaGCTGACCTGGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRITHHTL*LTWEMN
Trigger: GTTCATCTCCCAGGTCAGCCACAGCGTATGATGGGT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATCTGCCTCTAACCCCTaGAGATGCTCATCCCTAATA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVSASNP*RCSSLI
Trigger: TATTAGGGATGAGCATCTCCAGGGGTTAGAGGCAGA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTGGGTCCCACACTGCTaGCTTCAAATATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFWVPHC*LQIWRK
Trigger: CTTCCTCCATATTTGAAGCCAGCAGTGTGGGACCCA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCACTTCCCAAACTATaGTCCAAGAACCCCTGCGAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDALPKL*SKNPCD
Trigger: ATCGCAGGGGTTCTTGGACCATAGTTTGGGAAGTGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACTGTGTACTTTGGGTTaGGTGGGAAGGTATTGTGAA +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGILCTLG*VGRYCE
Trigger: TTCACAATACCTTCCCACCCAACCCAAAGTACACAG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAGGATTGTGACTGGCTaGGAATATTGTACTACAGTT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTRIVTG*EYCTTV
Trigger: AACTGTAGTACAATATTCCCAGCCAGTCACAATCCT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAAAGCGCGCGGTAACTaGAGGATAAATGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQKARGN*RINGRA
Trigger: TGCTCTTCCATTTATCCTCCAGTTACCGCGCGCTTT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
3UTR CAA 72 bp CCAGGAAGAAATCTTAAAGGTTTTGGTGGCTCCTGTTaGGTGACTTCCATTAAAGGTTCAACTGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: PGRNLKGFGGSC*VTSIKGSTAVG
Trigger: TCCAACAGCAGTTGAACCTTTAATGGAAGTCACCAAACAGGAGCCACCAAAACCTTTAAGATTTCTTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp CTGGTCATATACTTGACCAGTGGTGCCCAAAAGGCTTaGAAGTATATCATCCACAGGAAGAGGTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: LVIYLTSGAQKA*KYIIHRKRFIC
Trigger: GCAAATAAACCTCTTCCTGTGGATGATATACTTCAAAGCCTTTTGGGCACCACTGGTCAAGTATATGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGTAAGAAACGCTACTTaGCTGGCTGTTTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTVRNAT*LAVSVI
Trigger: GATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTAC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTACCAGGATGAGCGTGTaGCTTATCACTCAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTTRMSV*LITQRM
Trigger: CATTCTTTGAGTGATAAGTCACACGCTCATCCTGGT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTCAAGCAACCAGGATaGGCGTGTGACTTATCACTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFKQPG*ACDLSL
Trigger: GAGTGATAAGTCACACGCTCATCCTGGTTGCTTGAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACCAACACAATCACCATaGAACCAGTCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVPTQSP*NQSSHL
Trigger: GAGATGTGATGACTGGTTTCATGGTGATTGTGTTGG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATGAGTACCTGGTTTTaGAGCTTTTTCTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIMSTWF*SFFSCA
Trigger: TGCACAGGAGAAAAAGCTTCAAAACCAGGTACTCAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTGGTACCTTCAAATTTaGGTCTGTAAGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTWYLQI*VCKSLH
Trigger: ATGAAGAGACTTACAGACTCAAATTTGAAGGTACCA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATTCTGGCTTCTCCAATaGCTTATTGGCGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLFWLLQ*LIGGWF
Trigger: GAACCAGCCGCCAATAAGTCATTGGAGAAGCCAGAA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTCTGGCTTCTCCAATaGCTTATTGGCGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNFWLLQ*LIGGWF
Trigger: GAACCAGCCGCCAATAAGTCATTGGAGAAGCCAGAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTAGCAGGAGAGAACGTTaGCTTTGGAGACTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLSRRER*LWRLLF
Trigger: AAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCT...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCATCCTGCCACCTACTTaGATACTATCTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCILPPT*ILSGRS
Trigger: GGACCTACCAGATAGTATTCAAGTAGGTGGCAGGAT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATCCTGCCACCTACTTaGATACTATCTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDILPPT*ILSGRS
Trigger: GGACCTACCAGATAGTATTCAAGTAGGTGGCAGGAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTATCCTGCCACCTACTTaGATACTATCTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLILPPT*ILSGRS
Trigger: GGACCTACCAGATAGTATTCAAGTAGGTGGCAGGAT...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAGCGCTTTCTGCTACTaGAGTATGCAAAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVSAFCY*SMQRAK
Trigger: CTTTGCTCTTTGCATACTTCAGTAGCAGAAAGCGCT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGGAGTCTCAGCTATATaGCTAGTACTAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCGVSAI*LVLAQA
Trigger: TGCCTGTGCTAGTACTAGTCATATAGCTGAGACTCC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCCAGAGTAGTAGGTTaGTTCTCCCAGCCAATCAAC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSRVVG*FSQPIN
Trigger: GTTGATTGGCTGGGAGAATCAACCTACTACTCTGGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGCCTGGTCATATACTTaGCCAGTGGTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVAWSYT*PVVPKR
Trigger: CCTTTTGGGCACCACTGGTCAAGTATATGACCAGGC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGAAGTAGTTACAGGCTaGCTTCGTCCTGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVEVVTG*LRPAAC
Trigger: GCAAGCAGCAGGACGAAGTCAGCCTGTAACTACTTC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGATGTCGCTACTGCTaGTCCTCTTCGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRCRYC*SSSKWV
Trigger: CACCCATTTCGAAGAGGATCAGCAGTAGCGACATCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGGAACCATGGGATTTTaGGCAAAGCCAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLGTMGF*AKPKPG
Trigger: TCCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGGAACCATGGGATTTTaGGCAAAGCCAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNGTMGF*AKPKPG
Trigger: TCCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTCTTCTGACTCACACTaGACAGTTGGGTTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSSDSH*TVGLLS
Trigger: ACTGAGCAACCCAACTGTTCAGTGTGAGTCAGAAGA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTAAGCCTGAATTCATCTaGTATAGTTATAATCCTCCC +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTKPEFI*YSYNPP
Trigger: GGGAGGATTATAACTATATCAGATGAATTCAGGCTT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTVRYFG*TFYSPY
Trigger: ATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGAC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACTATTGGTTTTCATTaGTGGGGCCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTIGFH*WGLLLR
Trigger: CCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTTGCAAAACCCACACTaGTTGCTGGGAGTCCACATA +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFLQNPH*LLGVHI
Trigger: TATGTGGACTCCCAGCAAGCAGTGTGGGTTTTGCAA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTGCAAAACCCACACTaGTTGCTGGGAGTCCACATA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLQNPH*LLGVHI
Trigger: TATGTGGACTCCCAGCAAGCAGTGTGGGTTTTGCAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTTGCAAAACCCACACTaGTTGCTGGGAGTCCACATA +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQLQNPH*LLGVHI
Trigger: TATGTGGACTCCCAGCAAGCAGTGTGGGTTTTGCAA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTTGCCTGATCTGATCTaGAGAAGGCTTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQLPDLI*RRLGSR
Trigger: TCTGCTTCCAAGCCTTCTGCAGATCAGATCAGGCAA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATACTCGTCAAAGACCCTaGAGAAATGGAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNTRQRP*RNGRGP
Trigger: GGGTCCTCTTCCATTTCTGCAGGGTCTTTGACGAGT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTGACTTCGTCCTGCTaGTTGCCTAGGATCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLTSSC*LPRIPF
Trigger: AAAAGGGATCCTAGGCAAGCAGCAGGACGAAGTCAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAGTTGCTGTTGGTCTTaGCTACCCCAAGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYSCCWS*LPQGSL
Trigger: TAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGTTGCTGTTGGTCTTaGCTACCCCAAGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSCCWS*LPQGSL
Trigger: TAGTGACCCTTGGGGTAGGCAAGACCAACAGCAACT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAATGGCCTATCCAGTTaGTGTTGGTCTTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNNGLSS*CWSCLP
Trigger: GGGTAGGCAAGACCAACAGCAACTGGATAGGCCATT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTGTCTCTGCGTCTATaGCTTTCAGATTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLSLRL*LSDSCS
Trigger: GGAGCAAGAATCTGAAAGGCATAGACGCAGAGACAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTGGTCCAAGAACCCCTaGGATCTTTTCAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFWSKNP*DLFKES
Trigger: GGATTCCTTGAAAAGATCGCAGGGGTTCTTGGACCA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCTCCCAGTCCACCACTaGAGGTTGGAAAGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLPVHH*RLESSY
Trigger: GTAACTGCTTTCCAACCTGCAGTGGTGGACTGGGAG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCGCAGAAGCTATCCTTaGTCTTTCTTCTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDRRSYP*SFFWLA
Trigger: TGCCAACCAGAAGAAAGAGCAAGGATAGCTTCTGCG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTACAGGCAAACAGAACTaGTTACTTGCAGATCCTAGC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTTGKQN*LLADPS
Trigger: GCTAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATTGGTTTTCATTGCTaGGGCCTGTTGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDIGFHC*GLLLRL
Trigger: AAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAAAATGCTCAACGCCTaGGTGTTCAAGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQKMLNA*VFKLFL
Trigger: AAGGAAGAGCTTGAACACCCAGGCGTTGAGCATTTT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTAAAATGCTCAACGCCTaGGTGTTCAAGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAKMLNA*VFKLFL
Trigger: AAGGAAGAGCTTGAACACCCAGGCGTTGAGCATTTT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTGCTGCTTCTTCTTTaGCGGGGTTGTAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLLLLL*RGCRFF
Trigger: GAAGAACCTACAACCCCGCCAAAGAAGAAGCAGCAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTGCAGAAGGCTTaGAAGCAGAAGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNDLQKA*KQKQQD
Trigger: ATCCTGCTGCTTCTGCTTCCAAGCCTTCTGCAGATC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGTTCCTGAATCTCCATaGCTGCTTCCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVVPESP*LLPVLS
Trigger: TGAAAGAACAGGAAGCAGCCATGGAGATTCAGGAAC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAACTCTGTCAGGTATTCTaGGGAGCCAGATACTGGATA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCELCQVF*GARYWI
Trigger: TATCCAGTATCTGGCTCCCCAGAATACCTGACAGAG...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTCTCTGTCAGGTATTCTaGGGAGCCAGATACTGGATA +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLLCQVF*GARYWI
Trigger: TATCCAGTATCTGGCTCCCCAGAATACCTGACAGAG...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCERHKRV*NFICGT
Trigger: GGTGCCACAGATAAAATTCCACACCCTCTTGTGCCT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDRHKRV*NFICGT
Trigger: GGTGCCACAGATAAAATTCCACACCCTCTTGTGCCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGGCAATGCTATTGGTaGTGCACTTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDWQCYW*CTFRSL
Trigger: GAGACTCCTGAAAGTGCACCACCAATAGCATTGCCA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAGGTGGCAATGCTATTaGTGGTGCACTTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCRWQCY*WCTFRS
Trigger: ACTCCTGAAAGTGCACCACCAATAGCATTGCCACCT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAGACCCTGCAGAAATaGAAGAGGACCCTACTACTG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKTLQK*KRTLLL
Trigger: CAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTCTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGTTTGTACTTGTTCTaGGGCTGGTGCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSLYLF*GWCFWK
Trigger: CTTCCAGAAGCACCAGCCCCAGAACAAGTACAAACT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCTGCTGTGGCCTCATaGGTGAAAAGTTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDAAVAS*VKSLYL
Trigger: CAAGTACAAACTTTTCACCCATGAGGCCACAGCAGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTGGCCAGGGAACCATaGGATTTTGAGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVAREP*DFEQSQ
Trigger: TTGGCTTTGCTCAAAATCCCATGGTTCCCTGGCCAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGAGATGAACAACAGGTaGCCAGGGAACCATGGGATT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNEMNNR*PGNHGI
Trigger: AATCCCATGGTTCCCTGGCCACCTGTTGTTCATCTC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACTATGGCGCCTTTCTaGCCTCCGAATGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTMAPF*PPNVFN
Trigger: GTTAAAGACATTCGGAGGCCAGAAAGGCGCCATAGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAACTTCGCTACAACCTTaGCGACAGAACTATCATTCT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGITSLQP*RQNYHS
Trigger: AGAATGATAGTTCTGTCGCCAAGGTTGTAGCGAAGT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATTCCTGACCAGCTCTaGGAAATCAAGGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIIPDQL*EIKENF
Trigger: GAAGTTTTCCTTGATTTCCCAGAGCTGGTCAGGAAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACAGTCTAGAATGGCTTaGTATAGACCACAATGGAGA +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIQSRMA*YRPQWR
Trigger: TCTCCATTGTGGTCTATACCAAGCCATTCTAGACTG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp TTGCAAATCCGTACAAAAGAACTTACAGGTTTTTGGTaGTGTCTTCTGACTCACACTGAACAGTTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LQIRTKELTGFW*CLLTHTEQLGC
Trigger: GCAACCCAACTGTTCAGTGTGAGTCAGAAGACACAACCAAAAACCTGTAAGTTCTTTTGTACGGATTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGTAAGAAACGCTACTTaGCTGGCTGTTTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCVRNAT*LAVSVI
Trigger: GATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTAC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGCCAGAATTGCAACTCTaGATCTTTGGCTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQPELQL*IFGSLS
Trigger: TGATAAGGAGCCAAAGATTCAGAGTTGCAATTCTGG...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAACCAGGATGAGCGTGTaGCTTATCACTCAAAGAATG +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCETRMSV*LITQRM
Trigger: CATTCTTTGAGTGATAAGTCACACGCTCATCCTGGT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTTCAAGCAACCAGGATaGGCGTGTGACTTATCACTC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYFKQPG*ACDLSL
Trigger: GAGTGATAAGTCACACGCTCATCCTGGTTGCTTGAA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTCAAGCAACCAGGATaGGCGTGTGACTTATCACTC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNFKQPG*ACDLSL
Trigger: GAGTGATAAGTCACACGCTCATCCTGGTTGCTTGAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTTCAAATGAGGAGCTATaGTCAGAGCCTTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTSNEEL*SEPSLL
Trigger: AAGAAGAGAAGGCTCTGATCATAGCTCCTCATTTGA...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCCAACACAATCACCATaGAACCAGTCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDPTQSP*NQSSHL
Trigger: GAGATGTGATGACTGGTTTCATGGTGATTGTGTTGG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTATGAGTACCTGGTTTTaGAGCTTTTTCTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAMSTWF*SFFSCA
Trigger: TGCACAGGAGAAAAAGCTTCAAAACCAGGTACTCAT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTCTGCTTCATTGTCTaGATGTTTGCGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFCFIV*MFASYS
Trigger: GGAGTAGCTCGCAAACATTCAGACAATGAAGCAGAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGCAGGAGAGAACGTTaGCTTTGGAGACTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSRRER*LWRLLF
Trigger: AAACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGCGCTTTCTGCTACTaGAGTATGCAAAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSAFCY*SMQRAK
Trigger: CTTTGCTCTTTGCATACTTCAGTAGCAGAAAGCGCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGGAGTCTCAGCTATATaGCTAGTACTAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNGVSAI*LVLAQA
Trigger: TGCCTGTGCTAGTACTAGTCATATAGCTGAGACTCC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGTGGCTCCTGTTTGGTaGCTTCCATTAAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEVAPVW*LPLKVQ
Trigger: TTGAACCTTTAATGGAAGTCACCAAACAGGAGCCAC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTGGCTCCTGTTTGGTaGCTTCCATTAAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVAPVW*LPLKVQ
Trigger: TTGAACCTTTAATGGAAGTCACCAAACAGGAGCCAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTGCCCAAAAGGCTTTaGAGTATATCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVPKRL*SISSTG
Trigger: TCCTGTGGATGATATACTTCAAAGCCTTTTGGGCAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTTTTGTTCCATCACTaGCTGGGCCTGGTCATATAC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVLFHH*LGLVIY
Trigger: GTATATGACCAGGCCCAGTCAGTGATGGAACAAAAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCGTTTTGTTCCATCACTaGCTGGGCCTGGTCATATAC +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIVLFHH*LGLVIY
Trigger: GTATATGACCAGGCCCAGTCAGTGATGGAACAAAAC...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTAGATGTCGCTACTGCTaGTCCTCTTCGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPRCRYC*SSSKWV
Trigger: CACCCATTTCGAAGAGGATCAGCAGTAGCGACATCT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAACTGTGGCCTCATGGGTaGAAAGTTTGTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCELWPHG*KVCTCS
Trigger: AGAACAAGTACAAACTTTTCACCCATGAGGCCACAG...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTGTGGCCTCATGGGTaGAAAGTTTGTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLWPHG*KVCTCS
Trigger: AGAACAAGTACAAACTTTTCACCCATGAGGCCACAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTTGGTTGTGTCTTCTaGCTCACACTGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFGCVF*LTLNSW
Trigger: CCAACTGTTCAGTGTGAGTCAGAAGACACAACCAAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGGATTCACTGCCCTTTaGGTGCTTAGGCTATTTCCC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVGFTAL*VLRLFP
Trigger: GGGAAATAGCCTAAGCACTCAAAGGGCAGTGAATCC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGTCTGTGTCCTGTTTaGATAATCTTTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSLCPV*IIFAST
Trigger: GGTGGAGGCAAAGATTATTCAAACAGGACACAGACT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACATGGCAATAGAAAATaGACCTGTAGGTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIHGNRK*TCRFSR
Trigger: CCTTGAAAACCTACAGGTTCATTTTCTATTGCCATG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGTCATCCTGAAGGTTTaGTGTTTCATGGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTVILKV*CFMGLY
Trigger: ATAGAGTCCCATGAAACAGCAAACCTTCAGGATGAC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAACTATTGGTTTTCATTaGTGGGGCCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLTIGFH*WGLLLR
Trigger: CCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGTCTGATGAATTTCTaGCTTCACCAGACTCCCGTT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSLMNF*LHQTPV
Trigger: AACGGGAGTCTGGTGAAGGCAGAAATTCATCAGACT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGTCTGATGAATTTCTaGCTTCACCAGACTCCCGTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSLMNF*LHQTPV
Trigger: AACGGGAGTCTGGTGAAGGCAGAAATTCATCAGACT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTGCCTGATCTGATCTaGAGAAGGCTTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLPDLI*RRLGSR
Trigger: TCTGCTTCCAAGCCTTCTGCAGATCAGATCAGGCAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATCATCTACAGGTGGTaGCATTCGACCTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDIIYRW*HSTYAD
Trigger: ATCTGCATAGGTCGAATGGCACCACCTGTAGATGAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTATCATCTACAGGTGGTaGCATTCGACCTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLIIYRW*HSTYAD
Trigger: ATCTGCATAGGTCGAATGGCACCACCTGTAGATGAT...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCAATGCTATTGGTGGTaGACTTTCAGGAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYQCYWW*TFRSLS
Trigger: GCTGAGACTCCTGAAAGTGCACCACCAATAGCATTG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCAATGCTATTGGTGGTaGACTTTCAGGAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNQCYWW*TFRSLS
Trigger: GCTGAGACTCCTGAAAGTGCACCACCAATAGCATTG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTACTCGTCAAAGACCCTaGAGAAATGGAAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPTRQRP*RNGRGP
Trigger: GGGTCCTCTTCCATTTCTGCAGGGTCTTTGACGAGT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTGTCTCTGCGTCTATaGCTTTCAGATTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLSLRL*LSDSCS
Trigger: GGAGCAAGAATCTGAAAGGCATAGACGCAGAGACAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCTTGGCTTCTGTCTCTaGGTCTATGCCTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCLGFCL*VYAFQI
Trigger: AATCTGAAAGGCATAGACGCAGAGACAGAAGCCAAG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTTGGCTTCTGTCTCTaGGTCTATGCCTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLGFCL*VYAFQI
Trigger: AATCTGAAAGGCATAGACGCAGAGACAGAAGCCAAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCCTACTATCTCTGCTTaGTTTTCCATCTGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCPTISA*FSICSS
Trigger: CGAGGAACAGATGGAAAAGCAAGCAGAGATAGTAGG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGGAGGCTTTCTGATTaGCACAAAGATTACATGGGG +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFRRLSD*HKDYMG
Trigger: CCCCATGTAATCTTTGTGGCAATCAGAAAGCCTCCT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAACTGAACAGTTGGGTTaGTCAGTGAAGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCETEQLG*SVKGFR
Trigger: TCTGAAACCCTTCACTGAGCAACCCAACTGTTCAGT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATATTTCTTGCAGATGTTTaGCAGATTGGGCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIFLADV*QIGLEI
Trigger: TATTTCCAGCCCAATCTGGCAAACATCTGCAAGAAA...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGGCACAACTTTTTCTTaGAGATGTTTGCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVGTTFS*RCLPDW
Trigger: CCAATCTGGCAAACATCTGCAAGAAAAAGTTGTGCC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAAGGAGCCAGGAATGTaGAGAGAATTTATAGGTACC +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVKEPGM*REFIGT
Trigger: GGTACCTATAAATTCTCTGCACATTCCTGGCTCCTT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGTGGTTCCACCTCAATaGACTTCTGAAATACCCTCA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEVVPPQ*TSEIPS
Trigger: TGAGGGTATTTCAGAAGTGCATTGAGGTGGAACCAC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGCTTCATTCTCCAGGTTaGATCCTAGAAATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQLHSPG*ILEIGH
Trigger: ATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAG...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACAGGCAAACAGAACTaGTTACTTGCAGATCCTAGC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTGKQN*LLADPS
Trigger: GCTAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTAACCTGACTCCTTTCTaGTTGTTTCACTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTNLTPF*LFHSCF
Trigger: AAAGCAGGAGTGAAACAACCAGAAAGGAGTCAGGTT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGACTACCAACAGGCTTaGCTTTACATTCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTDYQQA*LYIPSK
Trigger: CTTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTATCAGCAATACCCATaGTATCCTTCAATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: AEGYLDLDGINVTEKASTYQQYP*YPSIPN
Trigger: ATTTGGAATTGAAGGATACCATGGGTATTGCTGATA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCATTGGTTTTCATTGCTaGGGCCTGTTGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIIGFHC*GLLLRL
Trigger: AAGCCTCAGCAACAGGCCCCAGCAATGAAAACCAAT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAAAATGCTCAACGCCTaGGTGTTCAAGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCKMLNA*VFKLFL
Trigger: AAGGAAGAGCTTGAACACCCAGGCGTTGAGCATTTT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAAATGCTCAACGCCTaGGTGTTCAAGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKMLNA*VFKLFL
Trigger: AAGGAAGAGCTTGAACACCCAGGCGTTGAGCATTTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTGCTGCTTCTTCTTTaGCGGGGTTGTAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLLLLL*RGCRFF
Trigger: GAAGAACCTACAACCCCGCCAAAGAAGAAGCAGCAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGGTAGCTATGTTATCTaGAATGAACAATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTGSYVI*NEQWWL
Trigger: GAGCCACCATTGTTCATTCCAGATAACATAGCTACC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTGATCTGCAGAAGGCTTaGAAGCAGAAGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPDLQKA*KQKQQD
Trigger: ATCCTGCTGCTTCTGCTTCCAAGCCTTCTGCAGATC...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCTCCAATGACTTATTaGCGGCTGGTTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSPMTY*RLVPES
Trigger: AGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGAAGATCATCTACAGGTaGTGCCATTCGACCTATGCA +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQKIIYR*CHSTYA
Trigger: TGCATAGGTCGAATGGCACCACCTGTAGATGATCTT...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGGGGAGCCAGATACTaGATAGGCTTTGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDWGARY*IGFGNK
Trigger: TTTGTTACCAAAGCCTATCCAGTATCTGGCTCCCCA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTCTGTCAGGTATTCTaGGGAGCCAGATACTGGATA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLCQVF*GARYWI
Trigger: TATCCAGTATCTGGCTCCCCAGAATACCTGACAGAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGGCAATGCTATTGGTaGTGCACTTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNWQCYW*CTFRSL
Trigger: GAGACTCCTGAAAGTGCACCACCAATAGCATTGCCA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGTGGCAATGCTATTaGTGGTGCACTTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRWQCY*WCTFRS
Trigger: ACTCCTGAAAGTGCACCACCAATAGCATTGCCACCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAAGACCCTGCAGAAATaGAAGAGGACCCTACTACTG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNKTLQK*KRTLLL
Trigger: CAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTCTT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATGTAGAAACATCTGGTaGCTTACCTCTGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVCRNIW*LTSETK
Trigger: CTTAGTCTCAGAGGTAAGCCACCAGATGTTTCTACA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAAAATTAGGAGGCCCTaGAAATGGAAATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFKIRRP*KWKSRW
Trigger: CCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAAATTAGGAGGCCCTaGAAATGGAAATCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKIRRP*KWKSRW
Trigger: CCACCTGGATTTCCATTTCCAGGGCCTCCTAATTTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTGGTCCCTATCTTTGTaGTACCTATCCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQWSLSL*YLSLSF
Trigger: AAAGGACAGGGATAGGTACCACAAAGATAGGGACCA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTATAACTAGGGACCGTTaGTATGAAGAAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAITRDR*YEEGMM
Trigger: CATCATCCCTTCTTCATACCAACGGTCCCTAGTTAT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACGATTATGAAGTTGCTTaGATTTTTGTTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: DPAEMEEDPTTDVSISADDYEVA*IFVAPL
Trigger: TAGAGGAGCAACAAAAATCCAAGCAACTTCATAATC...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAAACTTACCTATAAAGTaGGCTATAGCTGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGINLPIK*AIAAQC
Trigger: ACACTGTGCAGCTATAGCCCACTTTATAGGTAAGTT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGGTACTGAGATGCCCTaGTACTTTTACCTAATAGAG +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVGTEMP*YFYLIE
Trigger: CTCTATTAGGTAAAAGTACCAGGGCATCTCAGTACC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTTGCCTGTGTACTTTaGGTTGGGTGGGAAGGTATT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVACVL*VGWEGI
Trigger: AATACCTTCCCACCCAACCCAAAGTACACAGGCAAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACCAACCAGTCTAGAATaGCTTGGTATAGACCACAAT +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVPTSLE*LGIDHN
Trigger: ATTGTGGTCTATACCAAGCCATTCTAGACTGGTTGG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCTGGGAATCAACTGTTaGACCAAACCAAACACAGAC +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFLGINC*TKPNTD
Trigger: GTCTGTGTTTGGTTTGGTCCAACAGTTGATTCCCAG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTAAGACCAACAACTGTTaGACAAGGCATCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTKTNNC*TRHLEI
Trigger: AATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAACTTCTTCTTTAACCTaGCTCCTTTCTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVTSSLT*LLSGCF
Trigger: GAAACAACCAGAAAGGAGTCAGGTTAAAGAAGAAGT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTACTTCTTCTTTAACCTaGCTCCTTTCTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTTSSLT*LLSGCF
Trigger: GAAACAACCAGAAAGGAGTCAGGTTAAAGAAGAAGT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGGATGACACTGAAGAATaGCTTGAAGACACTGATACT +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQDDTEE*LEDTDT
Trigger: AGTATCAGTGTCTTCAAGTCATTCTTCAGTGTCATC...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGCTCACCCGTTTTACCTaGAATGGAATCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQLTRFT*NGIILF
Trigger: GAACAAAATGATTCCATTTCAGGTAAAACGGGTGAG...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAGCATTCAACTGTTTTaGATTTTGGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQSIQLF*ILVRHI
Trigger: GATGTGCCTGACCAAAATTCAAAACAGTTGAATGCT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTAAGAAACGCTACTTaGCTGGCTGTTTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVRNAT*LAVSVI
Trigger: GATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCCAGAATTGCAACTCTaGATCTTTGGCTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDPELQL*IFGSLS
Trigger: TGATAAGGAGCCAAAGATTCAGAGTTGCAATTCTGG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATACCAGGATGAGCGTGTaGCTTATCACTCAAAGAATG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNTRMSV*LITQRM
Trigger: CATTCTTTGAGTGATAAGTCACACGCTCATCCTGGT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCAAATGAGGAGCTATaGTCAGAGCCTTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSNEEL*SEPSLL
Trigger: AAGAAGAGAAGGCTCTGATCATAGCTCCTCATTTGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAATCTCTTGCTTCTCATaGGTACCTGGTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEISCFS*VPGFEA
Trigger: AGCTTCAAAACCAGGTACTCATGAGAAGCAAGAGAT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATATGAGTTATTTTGGTaGTTGGCCGTCGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEYELFW*LAVVPL
Trigger: AAGTGGAACGACGGCCAATCACCAAAATAACTCATA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGATGCTGTCTGTGTTaGCTAGTGGTATCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDRCCLC*LVVSLD
Trigger: GTCTAAAGATACCACTAGTCAACACAGACAGCATCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTTCTGCTTCATTGTCTaGATGTTTGCGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYFCFIV*MFASYS
Trigger: GGAGTAGCTCGCAAACATTCAGACAATGAAGCAGAA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTCTGCTTCATTGTCTaGATGTTTGCGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNFCFIV*MFASYS
Trigger: GGAGTAGCTCGCAAACATTCAGACAATGAAGCAGAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGCGCTTTCTGCTACTaGAGTATGCAAAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSAFCY*SMQRAK
Trigger: CTTTGCTCTTTGCATACTTCAGTAGCAGAAAGCGCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTGTCGCTTCAGTTTCTaGCGAATAATTAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCCRFSF*RIIKPN
Trigger: GTTGGGCTTAATTATTCGTCAGAAACTGAAGCGACA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTCCATCTTTGCTTTCTaGAGTAGTTACAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCSIFAF*SSYRLT
Trigger: AGTCAGCCTGTAACTACTTCAGAAAGCAAAGATGGA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTTTTCCAACTTCAAAATaGGATGTCGCTACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAFPTSK*DVATAD
Trigger: ATCAGCAGTAGCGACATCTCATTTTGAAGTTGGAAA...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCCTGTGGCCTCATGGGTaGAAAGTTTGTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRILWPHG*KVCTCS
Trigger: AGAACAAGTACAAACTTTTCACCCATGAGGCCACAG...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAAAGATTACATGGGGTaGACTTTACAGGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVKDYMG*TLQVLR
Trigger: TCTCAGTACCTGTAAAGTTCACCCCATGTAATCTTT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACCTTCACCTTTGAGTTaGCCAATGTTTATACTAAGT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIPSPLS*PMFILS
Trigger: ACTTAGTATAAACATTGGTCAACTCAAAGGTGAAGG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAAAGAAGAAACTGCCTaGACCACACTCCCATCATAT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEKEETA*TTLPSY
Trigger: ATATGATGGGAGTGTGGTTCAGGCAGTTTCTTCTTT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCGAATCTCTGTGCCTATaGGCTATAACAATGGCACAT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFESLCL*AITMAH
Trigger: ATGTGCCATTGTTATAGCTCATAGGCACAGAGATTC...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAGGCCTCCACTAAAATaGGTTCTCTGGACACAAATA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCERPPLK*VLWTQI
Trigger: TATTTGTGTCCAGAGAACTCATTTTAGTGGAGGCCT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACAAGCAATCTTACAGTaGAGAACATGCTTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIQAILQ*RTCFFQ
Trigger: TTGGAAAAAGCATGTTCTTCACTGTAAGATTGCTTG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATATATATACAATTCCCCTaGTATGCTGATTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIYIQFP*YADSVV
Trigger: GACTACAGAATCAGCATATCAGGGGAATTGTATATA...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTTGGTTGTTTCACTCCTaGTTTAGCAGTAGATACAGT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTWLFHS*FSSRYS
Trigger: ACTGTATCTACTGCTAAAGCAGGAGTGAAACAACCA...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLVRYFG*TFYSPY
Trigger: ATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGAC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVRYFG*TFYSPY
Trigger: ATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATATACTTCATACTTTGCTaGAACAATTTTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIYFILC*NNFLRS
Trigger: GCTCCGAAGAAAATTGTTGCAGCAAAGTATGAAGTA...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTTACATGTCCAGTTTGTaGAGGATGATGAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTYMSSL*RMMRFF
Trigger: AAAGAACCTCATCATCCTGCACAAACTGGACATGTA...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTACTATTGGTTTTCATTaGTGGGGCCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYITIGFH*WGLLLR
Trigger: CCTCAGCAACAGGCCCCAGCAATGAAAACCAATAGT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTGCCTGATCTGATCTaGAGAAGGCTTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLPDLI*RRLGSR
Trigger: TCTGCTTCCAAGCCTTCTGCAGATCAGATCAGGCAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAATAGATTAGGTCTATaGAGTTCAAGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDNRLGL*SSSPGP
Trigger: TGGACCTGGGCTTGAACTGCATAGACCTAATCTATT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTAATAGATTAGGTCTATaGAGTTCAAGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLNRLGL*SSSPGP
Trigger: TGGACCTGGGCTTGAACTGCATAGACCTAATCTATT...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTCAATGCTATTGGTGGTaGACTTTCAGGAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIQCYWW*TFRSLS
Trigger: GCTGAGACTCCTGAAAGTGCACCACCAATAGCATTG...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTGGGTTTTGCTTGTTCTaGTTGAGAAGTCTGTATGTT +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAGFCLF*LRSLYV
Trigger: AACATACAGACTTCTCAAGCAGAACAAGCAAAACCC...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTTGGCTTCTGTCTCTaGGTCTATGCCTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLGFCL*VYAFQI
Trigger: AATCTGAAAGGCATAGACGCAGAGACAGAAGCCAAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCTACTATCTCTGCTTaGTTTTCCATCTGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPTISA*FSICSS
Trigger: CGAGGAACAGATGGAAAAGCAAGCAGAGATAGTAGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAAATCCTGAAGCAGCCTaGAAATTTTACCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGINPEAA*KFYLLL
Trigger: AAGCAAAAGGTAAAATTTGCAGGCTGCTTCAGGATT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTCTAACCCCTGGAGATaGTCATCCCTAATAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYSNPWR*SSLIES
Trigger: GCTTTCTATTAGGGATGAGCATCTCCAGGGGTTAGA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAACCCGCTTCCTATTTTTaGTATCCTGGTGATAATGGT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEPASYF*YPGDNG
Trigger: ACCATTATCACCAGGATAGCAAAAATAGGAAGCGGG...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTACAAAAGAAGAAACTaGCTGAACCACACTCCCATC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDYKRRN*LNHTPI
Trigger: GATGGGAGTGTGGTTCAGGCAGTTTCTTCTTTTGTA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATGTGGGTACAACACATaGAGAAATGGAGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCECGYNT*RNGGEC
Trigger: ACATTCACCTCCATTTCTGCATGTGTTGTACCCACA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTTCATTCTCCAGGTTaGATCCTAGAAATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLHSPG*ILEIGH
Trigger: ATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATACAGGCAAACAGAACTaGTTACTTGCAGATCCTAGC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNTGKQN*LLADPS
Trigger: GCTAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGTTGAACAAGGCATCTaGAAATTGGGATCATTGCTA +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTVEQGI*KLGSLL
Trigger: TAGCAATGATCCCAATTTCCAGATGCCTTGTTCAAC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTCTTCTATTCTCCTTATaGTACTCAGGTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTLLFSL*YSGFSD
Trigger: GTCACTGAAACCTGAGTACCATAAGGAGAATAGAAG...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGCGTCCTCAAGAATATaGTCATCTTCATGGGATAAT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTASSRI*SSSWDN
Trigger: ATTATCCCATGAAGATGACCATATTCTTGAGGACGC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCGGTAGCTATGTTATCTaGAATGAACAATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFGSYVI*NEQWWL
Trigger: GAGCCACCATTGTTCATTCCAGATAACATAGCTACC...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTTCCTGAATCTCCATaGCTGCTTCCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVPESP*LLPVLS
Trigger: TGAAAGAACAGGAAGCAGCCATGGAGATTCAGGAAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCTCTCCAATGACTTATTaGCGGCTGGTTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRISPMTY*RLVPES
Trigger: AGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGA...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAAGATCATCTACAGGTaGTGCCATTCGACCTATGCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNKIIYR*CHSTYA
Trigger: TGCATAGGTCGAATGGCACCACCTGTAGATGATCTT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATGGGGAGCCAGATACTaGATAGGCTTTGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLWGARY*IGFGNK
Trigger: TTTGTTACCAAAGCCTATCCAGTATCTGGCTCCCCA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPRHKRV*NFICGT
Trigger: GGTGCCACAGATAAAATTCCACACCCTCTTGTGCCT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTTGGCAATGCTATTGGTaGTGCACTTTCAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPWQCYW*CTFRSL
Trigger: GAGACTCCTGAAAGTGCACCACCAATAGCATTGCCA...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTAAGACCCTGCAGAAATaGAAGAGGACCCTACTACTG +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVKTLQK*KRTLLL
Trigger: CAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTCTT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACAGGTTGATAAACTGTaGAGACCTCGCTGTATTAGC +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLQVDKL*RPRCIS
Trigger: GCTAATACAGCGAGGTCTCCACAGTTTATCAACCTG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCAGGTTGATAAACTGTaGAGACCTCGCTGTATTAGC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNQVDKL*RPRCIS
Trigger: GCTAATACAGCGAGGTCTCCACAGTTTATCAACCTG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTGCTGCTGTGGCCTCATaGGTGAAAAGTTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPAAVAS*VKSLYL
Trigger: CAAGTACAAACTTTTCACCCATGAGGCCACAGCAGC...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAAATGGAAATCCAGGTaGGCTAGACTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNKWKSR*ARLEML
Trigger: CAGCATCTCAAGTCTAGCCCACCTGGATTTCCATTT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGGAGGTGGCAAATGTaGTGGAAATCCAAACATGCT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNWRWQM*WKSKHA
Trigger: AGCATGTTTGGATTTCCACCACATTTGCCACCTCCA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGGTCCCTATCTTTGTaGTACCTATCCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNWSLSL*YLSLSF
Trigger: AAAGGACAGGGATAGGTACCACAAAGATAGGGACCA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTTAGTTCTGTCAGTGTaGTCCCTATCTTTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCLVLSV*SLSLWY
Trigger: GTACCACAAAGATAGGGACCACACTGACAGAACTAA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTAGTTCTGTCAGTGTaGTCCCTATCTTTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLVLSV*SLSLWY
Trigger: GTACCACAAAGATAGGGACCACACTGACAGAACTAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCTGGATTATCTGGGTaGGGTCAATGTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPGLSG*GQCNHK
Trigger: CTTGTGATTACATTGACCCCACCCAGATAATCCAGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATAGGAACATTACCCTaGATTATCTGGGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNIGTLP*IIWVGS
Trigger: TGACCCCACCCAGATAATCCAGGGTAATGTTCCTAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCACGTTAACATGGAGTaGCTTCACTTTTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDHVNME*LHFSLH
Trigger: ATGGAGTGAAAAGTGAAGCCACTCCATGTTAACGTG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGATAATTTTGCCACTTaGCAACCGGCAACATATGAC +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEDNFAT*QPATYD
Trigger: GTCATATGTTGCCGGTTGCCAAGTGGCAAAATTATC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGAAGAAAATGTTTCGTaGAGACTTCTGCGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEEENVS*RLLRGS
Trigger: TGAACCACGCAGAAGTCTCCACGAAACATTTTCTTC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp GGTCTCCATAATCAGACCTTGAAAATAGCAGTTAACTaGGGAGAAAGAATCTCTGTGCCTATGAGCTATAAC +
Preference number: 4 (lower is better)
Translates to: GLHNQTLKIAVN*GERISVPMSYN
Trigger: GTTATAGCTCATAGGCACAGAGATTCTTTCTCCCAAGTTAACTGCTATTTTCAAGGTCTGATTATGGAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp AATTATTTAGCATCTATTTATGGGCCAGATACCGTTTaGGGTGCTGGGAATCAACTGTTGGACCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: NYLASIYGPDTV*GAGNQLLDQTK
Trigger: TTTGGTTTGGTCCAACAGTTGATTCCCAGCACCCAAAACGGTATCTGGCCCATAAATAGATGCTAAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGTCCTCTAAGACATTTTaGCTTGCACTAAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQSSKTF*LALKSS
Trigger: TGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGA...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACTTCTTCTTTAACCTaGCTCCTTTCTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTSSLT*LLSGCF
Trigger: GAAACAACCAGAAAGGAGTCAGGTTAAAGAAGAAGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGGTACTCAGGTTTCAGTaGCATACATACTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQVLRFQ*HTYFFF
Trigger: AAAGAAGAAGTATGTATGTCACTGAAACCTGAGTAC...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGATGACACTGAAGAATaGCTTGAAGACACTGATACT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDDDTEE*LEDTDT
Trigger: AGTATCAGTGTCTTCAAGTCATTCTTCAGTGTCATC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTCACCCGTTTTACCTaGAATGGAATCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLTRFT*NGIILF
Trigger: GAACAAAATGATTCCATTTCAGGTAAAACGGGTGAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGCATTCAACTGTTTTaGATTTTGGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSIQLF*ILVRHI
Trigger: GATGTGCCTGACCAAAATTCAAAACAGTTGAATGCT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGCATTCAACTGTTTTaGATTTTGGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSIQLF*ILVRHI
Trigger: GATGTGCCTGACCAAAATTCAAAACAGTTGAATGCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCCAGAATTGCAACTCTaGATCTTTGGCTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYPELQL*IFGSLS
Trigger: TGATAAGGAGCCAAAGATTCAGAGTTGCAATTCTGG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTACCAGGATGAGCGTGTaGCTTATCACTCAAAGAATG +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPTRMSV*LITQRM
Trigger: CATTCTTTGAGTGATAAGTCACACGCTCATCCTGGT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATGAGTACCTGGTTTTaGAGCTTTTTCTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNMSTWF*SFFSCA
Trigger: TGCACAGGAGAAAAAGCTTCAAAACCAGGTACTCAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATCTCTTGCTTCTCATaGGTACCTGGTTTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNISCFS*VPGFEA
Trigger: AGCTTCAAAACCAGGTACTCATGAGAAGCAAGAGAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTTGGTACCTTCAAATTTaGGTCTGTAAGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: APKGIRYISLTCFMLLAAWYLQI*VCKSLH
Trigger: ATGAAGAGACTTACAGACTCAAATTTGAAGGTACCA...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTCATTCTGATAAGATaGTCAGGAGTTACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDLILIR*SGVTSP
Trigger: AGGAGAAGTAACTCCTGATCATCTTATCAGAATGAG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAGATGCTGTCTGTGTTaGCTAGTGGTATCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYRCCLC*LVVSLD
Trigger: GTCTAAAGATACCACTAGTCAACACAGACAGCATCT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCTTCAGTTACTGGTGTaGAGCGAACCACACAAATTT +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYLQLLV*SEPHKF
Trigger: AAATTTGTGTGGTTCGCTTCACACCAGTAACTGAAG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGTCGCTTCAGTTTCTaGCGAATAATTAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNCRFSF*RIIKPN
Trigger: GTTGGGCTTAATTATTCGTCAGAAACTGAAGCGACA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCTGTCGCTTCAGTTTCTaGCGAATAATTAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRICRFSF*RIIKPN
Trigger: GTTGGGCTTAATTATTCGTCAGAAACTGAAGCGACA...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTCCATCTTTGCTTTCTaGAGTAGTTACAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSIFAF*SSYRLT
Trigger: AGTCAGCCTGTAACTACTTCAGAAAGCAAAGATGGA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTTCCAACTTCAAAATaGGATGTCGCTACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFPTSK*DVATAD
Trigger: ATCAGCAGTAGCGACATCTCATTTTGAAGTTGGAAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGAACTTTACAGGTACTaGGATGCCCTGGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLELYRY*DALVLL
Trigger: TAAAAGTACCAGGGCATCTCAGTACCTGTAAAGTTC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAATGTCAACACCATTTaGCAGGGCACAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNNVNTI*QGTNVS
Trigger: GGAAACATTTGTGCCCTGTCAAATGGTGTTGACATT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAACTGCTGTTGTTACCTaGCATTTTCTGAGTTTGATA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVTAVVT*HFLSLI
Trigger: TATCAAACTCAGAAAATGTCAGGTAACAACAGCAGT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATATGCAGAAATGGAGGTaGATGTACAGTAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYMQKWR*MYSKWH
Trigger: GTGCCATTTACTGTACATTCACCTCCATTTCTGCAT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCAAAGTCAGTGTTGTTaGAGTAAAGAGAGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFQSQCC*SKESVR
Trigger: CCTTACACTCTCTTTACTTCAACAACACTGACTTTG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCCTTTACTTTTCTTCTaGATGCCTCATTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCPLLFF*MPHCNF
Trigger: GAAGTTGCAATGAGGCATTCAGAAGAAAAGTAAAGG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCAGTGGTCTATCCTGTTaGACAAGGCATCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRISGLSC*TRHLEI
Trigger: AATTTCCAGATGCCTTGTTCAACAGGATAGACCACT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGGAAATTGGGATCATTaGTATCCAAAACAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEGNWDH*YPKQAN
Trigger: GTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGGTTGTTTCACTCCTaGTTTAGCAGTAGATACAGT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDWLFHS*FSSRYS
Trigger: ACTGTATCTACTGCTAAAGCAGGAGTGAAACAACCA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTGTCCGCTATTTCGGCTaGACCTTCTATTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIVRYFG*TFYSPY
Trigger: ATAAGGAGAATAGAAGGTGCAGCCGAAATAGCGGAC...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTCATCCTGAAGGTTTaGTGTTTCATGGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVILKV*CFMGLY
Trigger: ATAGAGTCCCATGAAACAGCAAACCTTCAGGATGAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTTACTTCATACTTTGCTaGAACAATTTTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTYFILC*NNFLRS
Trigger: GCTCCGAAGAAAATTGTTGCAGCAAAGTATGAAGTA...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTACATGTCCAGTTTGTaGAGGATGATGAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDYMSSL*RMMRFF
Trigger: AAAGAACCTCATCATCCTGCACAAACTGGACATGTA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTTACATGTCCAGTTTGTaGAGGATGATGAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLYMSSL*RMMRFF
Trigger: AAAGAACCTCATCATCCTGCACAAACTGGACATGTA...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCTGAGGTGATATCCTaGCACCTACTTGAATACTAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSEVIS*HLLEYY
Trigger: ATAGTATTCAAGTAGGTGGCAGGATATCACCTCAGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTTCTGAGGTGATATCCTaGCACCTACTTGAATACTAT +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLSEVIS*HLLEYY
Trigger: ATAGTATTCAAGTAGGTGGCAGGATATCACCTCAGA...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATTTATCAGGTGGCAATaGTATTGGTGGTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLFIRWQ*YWWCTF
Trigger: GAAAGTGCACCACCAATAGCATTGCCACCTGATAAA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTTATCAGGTGGCAATaGTATTGGTGGTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNFIRWQ*YWWCTF
Trigger: GAAAGTGCACCACCAATAGCATTGCCACCTGATAAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGGGTTTTGCTTGTTCTaGTTGAGAAGTCTGTATGTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDGFCLF*LRSLYV
Trigger: AACATACAGACTTCTCAAGCAGAACAAGCAAAACCC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCCTCTTCGAAATGGGTaGACAGTTTCAATATTTTGC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDPLRNG*TVSIFC
Trigger: GCAAAATATTGAAACTGTGCACCCATTTCGAAGAGG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCATTCCTACTATCTCTaGTTGCTTTTCCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDHSYYL*LLFHLF
Trigger: GAACAGATGGAAAAGCAAGCAGAGATAGTAGGAATG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATTTCTTTGATACATTaGTTACGGGGAATCAACTGT +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIISLIH*LRGINC
Trigger: ACAGTTGATTCCCCGTAAGCAATGTATCAAAGAAAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAACATTGCAACTTCAGATaGTGGATGGTATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEHCNFR*WMVFVP
Trigger: AGGAACAAATACCATCCAGCATCTGAAGTTGCAATG...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATGGTTTGTGTTCACTTaGAGGCCACAAAGTATATTT +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVWFVFT*RPQSIF
Trigger: AAATATACTTTGTGGCCTGCAAGTGAACACAAACCA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGGAAGCTTTTTGTTTTTaGACAGGTCTCTGTGTATCA +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQEAFCF*TGLCVS
Trigger: TGATACACAGAGACCTGTGCAAAAACAAAAAGCTTC...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACTTCATTCTCCAGGTTaGATCCTAGAAATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLHSPG*ILEIGH
Trigger: ATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTACAGGCAAACAGAACTaGTTACTTGCAGATCCTAGC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVTGKQN*LLADPS
Trigger: GCTAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGGTTGAACAAGGCATCTaGAAATTGGGATCATTGCTA +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQVEQGI*KLGSLL
Trigger: TAGCAATGATCCCAATTTCCAGATGCCTTGTTCAAC...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAACCTGACTCCTTTCTaGTTGTTTCACTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLNLTPF*LFHSCF
Trigger: AAAGCAGGAGTGAAACAACCAGAAAGGAGTCAGGTT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAACCTGACTCCTTTCTaGTTGTTTCACTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNNLTPF*LFHSCF
Trigger: AAAGCAGGAGTGAAACAACCAGAAAGGAGTCAGGTT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCCTTCTATTCTCCTTATaGTACTCAGGTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCLLFSL*YSGFSD
Trigger: GTCACTGAAACCTGAGTACCATAAGGAGAATAGAAG...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGACTACCAACAGGCTTaGCTTTACATTCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNDYQQA*LYIPSK
Trigger: CTTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATATGGTCATCTTCATaGGATAATTTTACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIIWSSS*DNFTVS
Trigger: GGAGACAGTAAAATTATCCCATGAAGATGACCATAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCGCGTCCTCAAGAATATaGTCATCTTCATGGGATAAT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFASSRI*SSSWDN
Trigger: ATTATCCCATGAAGATGACCATATTCTTGAGGACGC...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCGTCCTCAAGAATATaGTCATCTTCATGGGATAAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDASSRI*SSSWDN
Trigger: ATTATCCCATGAAGATGACCATATTCTTGAGGACGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGTTTTATCTCCACTATaGAATTCAACTGTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVVLSPL*NSTVAW
Trigger: CCAAGCTACAGTTGAATTCCATAGTGGAGATAAAAC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAGTTATTTTGGTGATTaGCCGTCGTTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYSYFGD*PSFHFS
Trigger: AGAGAAGTGGAACGACGGCCAATCACCAAAATAACT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGTTATTTTGGTGATTaGCCGTCGTTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSYFGD*PSFHFS
Trigger: AGAGAAGTGGAACGACGGCCAATCACCAAAATAACT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCAGTTATTTTGGTGATTaGCCGTCGTTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRISYFGD*PSFHFS
Trigger: AGAGAAGTGGAACGACGGCCAATCACCAAAATAACT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTCCTGTTCTTTCATTaGGGCATCACTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFLFFH*GITLNF
Trigger: GAAATTGAGAGTGATGCCCCAATGAAAGAACAGGAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTAAGATCATCTACAGGTaGTGCCATTCGACCTATGCA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVKIIYR*CHSTYA
Trigger: TGCATAGGTCGAATGGCACCACCTGTAGATGATCTT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATCTTCTTCAGTTACTaGTGTGAAGCGAACCACACA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNIFFSY*CEANHT
Trigger: TGTGTGGTTCGCTTCACACCAGTAACTGAAGAAGAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGTAGAAACATCTGGTaGCTTACCTCTGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNCRNIW*LTSETK
Trigger: CTTAGTCTCAGAGGTAAGCCACCAGATGTTTCTACA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAGGTGGCAAATGTGGTaGAAATCCAAACATGCTTTG +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYRWQMW*KSKHAL
Trigger: CAAAGCATGTTTGGATTTCCACCACATTTGCCACCT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGTGGCAAATGTGGTaGAAATCCAAACATGCTTTG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRWQMW*KSKHAL
Trigger: CAAAGCATGTTTGGATTTCCACCACATTTGCCACCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTGGAGGTGGCAAATGTaGTGGAAATCCAAACATGCT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVWRWQM*WKSKHA
Trigger: AGCATGTTTGGATTTCCACCACATTTGCCACCTCCA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTGGTCCCTATCTTTGTaGTACCTATCCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVWSLSL*YLSLSF
Trigger: AAAGGACAGGGATAGGTACCACAAAGATAGGGACCA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGGGCTTCTGATTCTTaGTCAAAAACTGCTCAACTA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDWASDS*SKTAQL
Trigger: TAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAATAAATGTACCCCTTaGGCTTCTGATTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCNKCTP*ASDSWS
Trigger: TGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATTTCCAAAAGAAAAGTaGACCAAAGTTAAACGGGCT +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVFPKEK*TKVKRA
Trigger: AGCCCGTTTAACTTTGGTCCACTTTTCTTTTGGAAA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACTTGCAAAAGAAATCTaGAGTCTGATATTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVLAKEI*SLIFPQ
Trigger: TTGAGGGAATATCAGACTCCAGATTTCTTTTGCAAG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGAACTTACAGGTTTTTaGTTGTGTCTTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCELTGF*LCLLTH
Trigger: GTGAGTCAGAAGACACAACCAAAAACCTGTAAGTTC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAATGCCGAATATCCCTaGATGAGAAAAGAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVNAEYP*MRKEKG
Trigger: ACCTTTTTCTTTTCTCATCCAGGGATATTCGGCATT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTTTAGCATCTATTTATaGGCCAGATACCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFFSIYL*ARYRFG
Trigger: CCCAAAACGGTATCTGGCCCATAAATAGATGCTAAA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp TGCAGAATTGCCTTTACTTTTCTTCTGAATGCCTCATaGCAACTTCAGATGCTGGATGGTATTTGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: CRIAFTFLLNAS*QLQMLDGICSY
Trigger: ATAGGAACAAATACCATCCAGCATCTGAAGTTGCAATGAGGCATTCAGAAGAAAAGTAAAGGCAATTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp GTTGAAGATAATGCATCTGCTATACTTTCTGCTTCATaGTCTGAATGTTTGCGAGCTACTCCTACAACAACT +
Preference number: 4 (lower is better)
Translates to: VEDNASAILSAS*SECLRATPTTT
Trigger: AGTTGTTGTAGGAGTAGCTCGCAAACATTCAGACAATGAAGCAGAAAGTATAGCAGATGCATTATCTTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
3UTR CAA 72 bp AAATGTAATCCTGAAGCAGCCTGCAAATTTTACCTTTaGCTTTTAGTTCTGTCAGTGTGGTCCCTATCTTTG +
Preference number: 4 (lower is better)
Translates to: KCNPEAACKFYL*LLVLSVWSLSL
Trigger: CAAAGATAGGGACCACACTGACAGAACTAAAAGCAAAAGGTAAAATTTGCAGGCTGCTTCAGGATTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCCTCTAAGACATTTTaGCTTGCACTAAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSSKTF*LALKSS
Trigger: TGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAAGACCAACAACTGTTaGACAAGGCATCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNKTNNC*TRHLEI
Trigger: AATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262043.8
ENST00000393387.5
CDS-3UTR TCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGTACTCAGGTTTCAGTaGCATACATACTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCVLRFQ*HTYFFF
Trigger: AAAGAAGAAGTATGTATGTCACTGAAACCTGAGTAC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTGTACTCAGGTTTCAGTaGCATACATACTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLVLRFQ*HTYFFF
Trigger: AAAGAAGAAGTATGTATGTCACTGAAACCTGAGTAC...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGCATTCAACTGTTTTaGATTTTGGTCAGGCACATC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSIQLF*ILVRHI
Trigger: GATGTGCCTGACCAAAATTCAAAACAGTTGAATGCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTCAAATGAGGAGCTATaGTCAGAGCCTTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVSNEEL*SEPSLL
Trigger: AAGAAGAGAAGGCTCTGATCATAGCTCCTCATTTGA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACTCATTCTGATAAGATaGTCAGGAGTTACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLILIR*SGVTSP
Trigger: AGGAGAAGTAACTCCTGATCATCTTATCAGAATGAG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTTATGAGTTATTTTGGTaGTTGGCCGTCGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPYELFW*LAVVPL
Trigger: AAGTGGAACGACGGCCAATCACCAAAATAACTCATA...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTAGATGCTGTCTGTGTTaGCTAGTGGTATCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIRCCLC*LVVSLD
Trigger: GTCTAAAGATACCACTAGTCAACACAGACAGCATCT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTCTTCAGTTACTGGTGTaGAGCGAACCACACAAATTT +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYILQLLV*SEPHKF
Trigger: AAATTTGTGTGGTTCGCTTCACACCAGTAACTGAAG...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGGATCTACTACTCATTaGAAAATCTGCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDGSTTH*KICSFS
Trigger: GGAAAATGAGCAGATTTTTCAATGAGTAGTAGATCC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAAGTTGCTCATCAGCTaGCCTGAAAATAGGAACATT +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYKLLIS*PENRNI
Trigger: AATGTTCCTATTTTCAGGTCAGCTGATGAGCAACTT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTTTGCTGAAAAACTGTaGCCTAAACTGGTATTGCTC +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYFAEKL*PKLVLL
Trigger: GAGCAATACCAGTTTAGGTCACAGTTTTTCAGCAAA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATGCATTTTGCTCTGTaGGTGGAAACAAAACTAACA +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDMHFAL*VETKLT
Trigger: TGTTAGTTTTGTTTCCACTCACAGAGCAAAATGCAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGCCAATGTGTACTTATaGCCCATAACTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVANVYL*PITRAS
Trigger: TGATGCTCTAGTTATGGGTCATAAGTACACATTGGC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTGGTTGTTTCACTCCTaGTTTAGCAGTAGATACAGT +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYWLFHS*FSSRYS
Trigger: ACTGTATCTACTGCTAAAGCAGGAGTGAAACAACCA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTGTCATCCTGAAGGTTTaGTGTTTCATGGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIVILKV*CFMGLY
Trigger: ATAGAGTCCCATGAAACAGCAAACCTTCAGGATGAC...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTACTTCATACTTTGCTaGAACAATTTTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQYFILC*NNFLRS
Trigger: GCTCCGAAGAAAATTGTTGCAGCAAAGTATGAAGTA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTACATGTCCAGTTTGTaGAGGATGATGAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNYMSSL*RMMRFF
Trigger: AAAGAACCTCATCATCCTGCACAAACTGGACATGTA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCATTGTCTGAATGTTTaGGAGCTACTCCTACAACAA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNHCLNV*ELLLQQ
Trigger: TTGTTGTAGGAGTAGCTCGCAAACATTCAGACAATG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTAATAGATTAGGTCTATaGAGTTCAAGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVNRLGL*SSSPGP
Trigger: TGGACCTGGGCTTGAACTGCATAGACCTAATCTATT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTTTATCAGGTGGCAATaGTATTGGTGGTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIFIRWQ*YWWCTF
Trigger: GAAAGTGCACCACCAATAGCATTGCCACCTGATAAA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAATTTGTTCTGTTAAGTaGTCCTTGTTGTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLICSVK*SLLCDR
Trigger: CCTGTCACACAACAAGGAGCACTTAACAGAACAAAT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATTTGTTCTGTTAAGTaGTCCTTGTTGTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNICSVK*SLLCDR
Trigger: CCTGTCACACAACAAGGAGCACTTAACAGAACAAAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCTCTTCGAAATGGGTaGACAGTTTCAATATTTTGC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPLRNG*TVSIFC
Trigger: GCAAAATATTGAAACTGTGCACCCATTTCGAAGAGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTCAGAGTACCAAATTaGGATGGTGTAAAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVRVPN*DGVKVF
Trigger: GAAAACTTTTACACCATCGCAATTTGGTACTCTGAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAGTGCAGAAGCCTGTTaGTTTTTGCTTATGAACCTT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLSAEAC*FLLMNL
Trigger: AAGGTTCATAAGCAAAAAGCAACAGGCTTCTGCACT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAGAATACAGGATATATaGATTTTGCTCTGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCERIQDI*ILLCEW
Trigger: CCACTCACAGAGCAAAATGCATATATCCTGTATTCT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTTGAACAAGGCATCTaGAAATTGGGATCATTGCTA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVEQGI*KLGSLL
Trigger: TAGCAATGATCCCAATTTCCAGATGCCTTGTTCAAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTGTTCTTCTTCATCAATaGTATCATTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTVLLHQ*YHCHFL
Trigger: AAGAAAGTGGCAATGATACCATTGATGAAGAAGAAC...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTTCTATTCTCCTTATaGTACTCAGGTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLLFSL*YSGFSD
Trigger: GTCACTGAAACCTGAGTACCATAAGGAGAATAGAAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGACTACCAACAGGCTTaGCTTTACATTCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVDYQQA*LYIPSK
Trigger: CTTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGATATGGTCATCTTCATaGGATAATTTTACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQIWSSS*DNFTVS
Trigger: GGAGACAGTAAAATTATCCCATGAAGATGACCATAT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGTATCAGCAATACCCATaGTATCCTTCAATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQYQQYP*YPSIPN
Trigger: ATTTGGAATTGAAGGATACCATGGGTATTGCTGATA...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAGGTTTGCTGTTTCATaGGACTCTATTTTAGTACTT +
Preference number: 4 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQRFAVS*DSILVL
Trigger: AAGTACTAAAATAGAGTCCCATGAAACAGCAAACCT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTTTTATCTCCACTATaGAATTCAACTGTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVLSPL*NSTVAW
Trigger: CCAAGCTACAGTTGAATTCCATAGTGGAGATAAAAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTATCTTCTTCAGTTACTaGTGTGAAGCGAACCACACA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVIFFSY*CEANHT
Trigger: TGTGTGGTTCGCTTCACACCAGTAACTGAAGAAGAT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTATCTTCTTCAGTTACTaGTGTGAAGCGAACCACACA +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIIFFSY*CEANHT
Trigger: TGTGTGGTTCGCTTCACACCAGTAACTGAAGAAGAT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTGTAGAAACATCTGGTaGCTTACCTCTGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYICRNIW*LTSETK
Trigger: CTTAGTCTCAGAGGTAAGCCACCAGATGTTTCTACA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTAGGTGGCAAATGTGGTaGAAATCCAAACATGCTTTG +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIRWQMW*KSKHAL
Trigger: CAAAGCATGTTTGGATTTCCACCACATTTGCCACCT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATTTACCCCTATTAAATaGCCTATCCAGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLFTPIK*PIQLLL
Trigger: CAACAGCAACTGGATAGGCCATTTAATAGGGGTAAA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTTACCCCTATTAAATaGCCTATCCAGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNFTPIK*PIQLLL
Trigger: CAACAGCAACTGGATAGGCCATTTAATAGGGGTAAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAATAAATGTACCCCTTaGGCTTCTGATTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNNKCTP*ASDSWS
Trigger: TGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTACACACACGTTAACATaGAGTGGCTTCACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVTHTLT*SGFTFH
Trigger: GTGAAAAGTGAAGCCACTCCATGTTAACGTGTGTGT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCAACTGTGACCTAAACTaGTATTGCTCCATACTATTG +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCNCDLN*YCSILL
Trigger: CAATAGTATGGAGCAATACCAGTTTAGGTCACAGTT...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAACTTGTTCCAGTTTTTaGTGGTATAACCCAATGTAT +
Preference number: 4 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVTCSSF*WYNPMY
Trigger: ATACATTGGGTTATACCACCAAAAACTGGAACAAGT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTCCTCTAAGACATTTTaGCTTGCACTAAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSSKTF*LALKSS
Trigger: TGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTACTCAGGTTTCAGTaGCATACATACTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVLRFQ*HTYFFF
Trigger: AAAGAAGAAGTATGTATGTCACTGAAACCTGAGTAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGATGACACTGAAGAATaGCTTGAAGACACTGATACT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVDDTEE*LEDTDT
Trigger: AGTATCAGTGTCTTCAAGTCATTCTTCAGTGTCATC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTGATGACACTGAAGAATaGCTTGAAGACACTGATACT +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPDDTEE*LEDTDT
Trigger: AGTATCAGTGTCTTCAAGTCATTCTTCAGTGTCATC...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCTCACCCGTTTTACCTaGAATGGAATCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLTRFT*NGIILF
Trigger: GAACAAAATGATTCCATTTCAGGTAAAACGGGTGAG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGGTACCTTCAAATTTaGGTCTGTAAGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNWYLQI*VCKSLH
Trigger: ATGAAGAGACTTACAGACTCAAATTTGAAGGTACCA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR TCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTCTCATTCTGATAAGATaGTCAGGAGTTACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPLILIR*SGVTSP
Trigger: AGGAGAAGTAACTCCTGATCATCTTATCAGAATGAG...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTTCCAACTTCAAAATaGGATGTCGCTACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVFPTSK*DVATAD
Trigger: ATCAGCAGTAGCGACATCTCATTTTGAAGTTGGAAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCTAAGCCTTCACCTTTaGGTTGACCAATGTTTATAC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLSLHL*VDQCLY
Trigger: GTATAAACATTGGTCAACTCAAAGGTGAAGGCTTAG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAAAAAAGGAATCTCCCTaGAAGTCTCCAGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLKKESP*KSPENE
Trigger: TTCATTTTCTGGAGACTTTCAGGGAGATTCCTTTTT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGAGTGTAAGGGGTCTTaGAAACAAAAGTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLECKGS*KQKFEN
Trigger: ATTCTCAAACTTTTGTTTTCAAGACCCCTTACACTC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCTTTATCCTATTTaGGCTCTGTTTCTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNDLYPI*ALFLVR
Trigger: CCTTACAAGAAACAGAGCTCAAATAGGATAAAGATC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTACTTCATACTTTGCTaGAACAATTTTCTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNYFILC*NNFLRS
Trigger: GCTCCGAAGAAAATTGTTGCAGCAAAGTATGAAGTA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCATTGTCTGAATGTTTaGGAGCTACTCCTACAACAA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVHCLNV*ELLLQQ
Trigger: TTGTTGTAGGAGTAGCTCGCAAACATTCAGACAATG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAATTTGGTAACAAATTTTaGCACAGAAGGCATGTTGAT +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEFGNKF*HRRHVD
Trigger: ATCAACATGCCTTCTGTGGCAAAATTTGTTACCAAA...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTTGGTAACAAATTTTaGCACAGAAGGCATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFGNKF*HRRHVD
Trigger: ATCAACATGCCTTCTGTGGCAAAATTTGTTACCAAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTATTTGTTCTGTTAAGTaGTCCTTGTTGTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIICSVK*SLLCDR
Trigger: CCTGTCACACAACAAGGAGCACTTAACAGAACAAAT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGGGTTTTGCTTGTTCTaGTTGAGAAGTCTGTATGTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVGFCLF*LRSLYV
Trigger: AACATACAGACTTCTCAAGCAGAACAAGCAAAACCC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCATTCCTACTATCTCTaGTTGCTTTTCCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVHSYYL*LLFHLF
Trigger: GAACAGATGGAAAAGCAAGCAGAGATAGTAGGAATG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAATCCTGAAGCAGCCTaGAAATTTTACCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNNPEAA*KFYLLL
Trigger: AAGCAAAAGGTAAAATTTGCAGGCTGCTTCAGGATT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR GCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCAATCCTGAAGCAGCCTaGAAATTTTACCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRINPEAA*KFYLLL
Trigger: AAGCAAAAGGTAAAATTTGCAGGCTGCTTCAGGATT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATAGATGGAATTTAAGTTaGTCATCAGCTGACCTGAAA +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYRWNLS*SSADLK
Trigger: TTTCAGGTCAGCTGATGAGCAACTTAAATTCCATCT...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCGACCTAAACTGGTATTaGTCCATACTATTGCATTTA +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFDLNWY*SILLHL
Trigger: TAAATGCAATAGTATGGAGCAATACCAGTTTAGGTC...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCGAATACACATTTCTGTaGAGATTCCAGTCTATACAA +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFEYTFL*RFQSIQ
Trigger: TTGTATAGACTGGAATCTGCACAGAAATGTGTATTC...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAACTCCATTAGTTCAGTaGTTATTCACAGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLTPLVQ*LFTECA
Trigger: AGCACATTCTGTGAATAAGCACTGAACTAATGGAGT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTGCTTTTTCCAAGCTTaGAGAATTGCCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFCFFQA*RIAFTF
Trigger: AAAAGTAAAGGCAATTCTGCAAGCTTGGAAAAAGCA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTTCTTCTTCATCAATaGTATCATTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVLLHQ*YHCHFL
Trigger: AAGAAAGTGGCAATGATACCATTGATGAAGAAGAAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTTTTATCTCCACTATaGAATTCAACTGTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVLSPL*NSTVAW
Trigger: CCAAGCTACAGTTGAATTCCATAGTGGAGATAAAAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGATTATGAAGTTGCTTaGATTTTTGTTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEDYEVA*IFVAPL
Trigger: TAGAGGAGCAACAAAAATCCAAGCAACTTCATAATC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTTGGGCTTCTGATTCTTaGTCAAAAACTGCTCAACTA +
Preference number: 4 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPWASDS*SKTAQL
Trigger: TAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCA...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCAATTGCTAAGCACATaGACTTTAGAGAAAAGAACT +
Preference number: 4 (lower is better)
Translates to: GIFRVILDSLPFECLGYFQLLST*TLEKRT
Trigger: AGTTCTTTTCTCTAAAGTCCATGTGCTTAGCAATTG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCTACACCCCAATCCTTaGAACACCTGTAAATATGTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLHPNP*NTCKYV
Trigger: AACATATTTACAGGTGTTCCAAGGATTGGGGTGTAG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGAAGGTCTAATTGTATaGATGGGAATAGCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCEGLIV*MGIAQN
Trigger: ATTTTGAGCTATTCCCATCCATACAATTAGACCTTC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTAGATGTTTGCCAGATTaGGCTGGAAATACATGTAAC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVRCLPD*AGNTCN
Trigger: GTTACATGTATTTCCAGCCCAATCTGGCAAACATCT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGTGAATGCCATTAAATaGTATCATAAGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNVNAIK*YHKEQA
Trigger: AGCCTGTTCCTTATGATACCATTTAATGGCATTCAC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGCAACTTCAGATGCTaGATGGTATTTGTTCCTATT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNCNFRC*MVFVPI
Trigger: AATAGGAACAAATACCATCCAGCATCTGAAGTTGCA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCTATTAGCGAAGAGGTaGTCAAAAACTGACCTAAAA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLLAKR*SKTDLK
Trigger: TTTTAGGTCAGTTTTTGATCACCTCTTCGCTAATAG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR TCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTACTGATACAATTGTaGACAGAACTTTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLLIQL*TELSLP
Trigger: GGGAAGTGAAAGTTCTGTTCACAATTGTATCAGTAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTGGAAAGCAGTTACTaGTGTTGTTACCTGACATTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLESSY*CCYLTF
Trigger: AAATGTCAGGTAACAACAGCAGTAACTGCTTTCCAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGATATATGCATTTTaGTCTGTGAGTGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRIYAF*SVSGNK
Trigger: TTTGTTTCCACTCACAGAGCAAAATGCATATATCCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR GCA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTCTGACAAAGACATCTaGACATATAGTTACATCTCT +
Preference number: 4 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYSDKDI*TYSYIS
Trigger: AGAGATGTAACTATATGTGCAGATGTCTTTGTCAGA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGTTCTTCTTCATCAATaGTATCATTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLVLLHQ*YHCHFL
Trigger: AAGAAAGTGGCAATGATACCATTGATGAAGAAGAAC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCGTTCTTCTTCATCAATaGTATCATTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIVLLHQ*YHCHFL
Trigger: AAGAAAGTGGCAATGATACCATTGATGAAGAAGAAC...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATATGGTCATCTTCATaGGATAATTTTACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNIWSSS*DNFTVS
Trigger: GGAGACAGTAAAATTATCCCATGAAGATGACCATAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTATCAGCAATACCCATaGTATCCTTCAATTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNYQQYP*YPSIPN
Trigger: ATTTGGAATTGAAGGATACCATGGGTATTGCTGATA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGTTTGCTGTTTCATaGGACTCTATTTTAGTACTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRFAVS*DSILVL
Trigger: AAGTACTAAAATAGAGTCCCATGAAACAGCAAACCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCACACAAATTTCCTTaGTTCCTGATGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPHKFP*FLMLLF
Trigger: AAATAAAAGCATCAGGAACCAAGGAAATTTGTGTGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CCA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCCCACACAAATTTCCTTaGTTCCTGATGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIPHKFP*FLMLLF
Trigger: AAATAAAAGCATCAGGAACCAAGGAAATTTGTGTGG...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CCA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACTACCTGGATCTAGATaGGATAAATGTAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLPGSR*DKCNRK
Trigger: TTTTCTGTTACATTTATCCCATCTAGATCCAGGTAG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGTGGAGACTTCTGCGTaGTTCATTATTAATAAGTCA +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVVETSA*FIINKS
Trigger: TGACTTATTAATAATGAACCACGCAGAAGTCTCCAC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
3UTR CAA 72 bp AATGATTTTCTGGCAATTGGTCTCCATAATCAGACCTaGAAAATAGCAGTTAACTTGGGAGAAAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: NDFLAIGLHNQT*KIAVNLGERIS
Trigger: AGAGATTCTTTCTCCCAAGTTAACTGCTATTTTCAAGGTCTGATTATGGAGACCAATTGCCAGAAAATCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTAGGTTTGCTGTTTCATaGGACTCTATTTTAGTACTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVRFAVS*DSILVL
Trigger: AAGTACTAAAATAGAGTCCCATGAAACAGCAAACCT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CCA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTACTTCAGATGCTGGATaGTATTTGTTCCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVTSDAG*YLFLFL
Trigger: AAGAAATAGGAACAAATACCATCCAGCATCTGAAGT...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS GCA 90 bp GGCTCCCTGAGAAGGAAGAGGCCCCAACGGCCGGATCCGGGGGCCTaGGAGACGGGCCTTCCAGGCAGCGCCCGCCGTGCCTCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GSLRRKRPQRPDPGA*ETGLPGSARRASGL
Trigger: CAGGCCCGAGGCACGGCGGGCGCTGCCTGGAAGGCCCGTCTCGCAGGCCCCCGGATCCGGCCGTTGGGGCCTCTTCCTTCTCAGGGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS GCA 90 bp CTAATCCTCGTTGCAGCCGCCGCCGCCCTGAGCCCGAAGGTCGCTTaGCGCGTGGGGACGGTGCGACGGCGCGAGACCCCGCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: LILVAAAAALSPKVA*RVGTVRRRETPQPS
Trigger: CGATGGCTGCGGGGTCTCGCGCCGTCGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCTCAGGGCGGCGGCGGCTGCAACGAGGATTAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262043.8
ENST00000481385.6
ENST00000494284.6
ENST00000506783.5
ENST00000515594.5
CDS GCA 90 bp GCCAGGGCCAGTCCCAGTTTCCCGAAACCAAGGCCCAAAGCTCCATaGTGGGGCTCCCTGAGAAGGAAGAGGCCCCAACGGCCGGATCCG +
Preference number: 5 (lower is better)
Translates to: ARASPSFPKPRPKAP*WGSLRRKRPQRPDP
Trigger: CGGATCCGGCCGTTGGGGCCTCTTCCTTCTCAGGGAGCCCCAGCATGGAGCTTTGGGCCTTGGTTTCGGGAAACTGGGACTGGCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS CCA 90 bp GACGTCGGCGTCGCTGCCACAGCCTCTTTTCCTCCTGGGACCAAATaGCTGCTGCTGACGACACTATTCTTGGCTTCCGCGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: DVGVAATASFPPGTK*LLLTTLFLASAPPS
Trigger: GGAGGGCGGCGCGGAAGCCAAGAATAGTGTCGTCAGCAGCAGCCATTTGGTCCCAGGAGGAAAAGAGGCTGTGGCAGCGACGCCGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262043.8
ENST00000481385.6
ENST00000494284.6
ENST00000506783.5
ENST00000515594.5
CDS CCA 90 bp TCTGTGTGTCTTTCAGCCCCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGCCGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: SVCLSAPAPPDERYH*QQEEDGGRCRRRRG
Trigger: TCCTCTTCGGCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGGGCTGAAAGACACACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS CCA 90 bp CATTCTCCAGGTTGGATCCCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGCCGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: HSPGWIPAPPDERYH*QQEEDGGRCRRRRG
Trigger: TCCTCTTCGGCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGGATCCAACCTGGAGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494284.6
CDS CCA 90 bp TATCGTCAAGACCAACAACCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGCCGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: YRQDQQPAPPDERYH*QQEEDGGRCRRRRG
Trigger: TCCTCTTCGGCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGTTGTTGGTCTTGACGATA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481385.6
ENST00000515594.5
CDS CCA 90 bp GCAAACTTCTTACTTGTTCCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGCCGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: ANFLLVPAPPDERYH*QQEEDGGRCRRRRG
Trigger: TCCTCTTCGGCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGAACAAGTAAGAAGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506783.5
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGCTGCATTTGAACGCTaGGCAATAGTGCTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNAAFER*AIVLCR
Trigger: GCGACAGAGCACTATTGCCAAGCGTTCAAATGCAGC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGCGGGCCTATATACCTaGATGCTTGTGAGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNAGLYT*MLVRED
Trigger: GTCCTCTCTCACAAGCATCAAGGTATATAGGCCCGC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGTGTGGTCCCTATCTTaGTGGTACCTATCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNVWSLS*WYLSLS
Trigger: GGACAGGGATAGGTACCACAAAGATAGGGACCACAC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAGAGCCCGAAGGTCGCTaGCCGCGTGGGGACGGTGCG +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEEPEGR*PRGDGA
Trigger: CGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCTC...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATGAGAGAACGTTGACTTaGGAGACTCCTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNERTLT*ETPVSP
Trigger: AGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTC...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAGAATGTCTGACACTTaGCCTGATCTGATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNRMSDT*PDLICR
Trigger: TCTGCAGATCAGATCAGGCAAAGTGTCAGACATTCT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATAGTAAGAAACGCTACTaGACTGGCTGTTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNSKKRY*TGCFCH
Trigger: ATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTACT...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATGGGAACCATGGGATTTaGAGCAAAGCCAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: APFWPPNVFNLVKILRAYGNHGI*SKAKAW
Trigger: CCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCCC...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCATTGCTGGGGCCTGTaGCTGAGGCTTATGACACTG +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTHCWGL*LRLMTL
Trigger: CAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATGAGCAGGAGAGAACGTaGACTTTGGAGACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: APFWPPNVFNLVKILRAYEQERT*TLETPV
Trigger: AACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTC...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCTGACGACACTATTCTaGGCTTCCGCGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFLTTLF*ASAPPS
Trigger: GGAGGGCGGCGCGGAAGCCAAGAATAGTGTCGTCAG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGCTGCATTTGAACGCTaGGCAATAGTGCTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTAAFER*AIVLCR
Trigger: GCGACAGAGCACTATTGCCAAGCGTTCAAATGCAGC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTCAGGTGGCAATGCTATaGGTGGTGCACTTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTQVAML*VVHFQE
Trigger: CTCCTGAAAGTGCACCACCAATAGCATTGCCACCTG...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCATTCCAGAGTAGTAGGTaGATTCTCCCAGCCAATCAA +
Preference number: 5 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPFQSSR*ILPANQ
Trigger: TTGATTGGCTGGGAGAATCAACCTACTACTCTGGAA...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTTCTGTTAAGTGCTCCTaGTTGTGTGACAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTSVKCS*LCDRPG
Trigger: GCCTGGCCTGTCACACAACAAGGAGCACTTAACAGA...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATCCTCCTGTAAGGGTTTaGCTTGTTCTGCTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: APFWPPNVFNLVKILRAYPPVRV*LVLLEK
Trigger: CTTCTCAAGCAGAACAAGCAAAACCCTTACAGGAGG...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGCGGGCCTATATACCTaGATGCTTGTGAGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTAGLYT*MLVRED
Trigger: GTCCTCTCTCACAAGCATCAAGGTATATAGGCCCGC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp CTGTTGGTCTTGCCTACCCCAAGGGTCACTATGGCGCCTTTCTGGCCTCCGAATTTGCTTGGATTTTTGTaGCTCCTCTACAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLVLPTPRVTMAPFWPPNLLGFL*LLYSFF
Trigger: AAAGAAACTGTAGAGGAGCAACAAAAATCCAAGCAA...ATTCGGAGGCCAGAAAGGCGCCATAGTGACCCTTGGGGTAGGCAAGACCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS TCA 90 bp AGTCTAGGCTTCTCATTTCAAACTAAGCAAAAGGAGTCCACAGTTTaGGTCCCGGGCACAAAAGCGCGCGGTAACTGGAGGATAAATGGA +
Preference number: 5 (lower is better)
Translates to: SLGFSFQTKQKESTV*VPGTKARGNWRING
Trigger: TCCATTTATCCTCCAGTTACCGCGCGCTTTTGTGCCCGGGACTCAAACTGTGGACTCCTTTTGCTTAGTTTGAAATGAGAAGCCTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp GCCCAGGTCCATCAAAAGGCACAAGAGGGTGTGGAATTTTATCTGTGGCACCCACTTCTTTTTCATCTCTaGCTTCTCATGAGTACCTGG +
Preference number: 5 (lower is better)
Translates to: AQVHQKAQEGVEFYLWHPLLFHL*LLMSTW
Trigger: CCAGGTACTCATGAGAAGCAAGAGATGAAAAAGAAG...TGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTGAGCAGGAGAGAACGTaGACTTTGGAGACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTEQERT*TLETPV
Trigger: AACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTC...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCTTCTCCAATGACTTATTGGCGGCTGGTTCCTGAATCTCCATGGCTGCTTCCTAAATCCAAACATGCTTaGTGGGGGAAAATTAGGAGG +
Preference number: 5 (lower is better)
Translates to: ASPMTYWRLVPESPWLLPKSKHA*WGKIRR
Trigger: CCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTT...AGGAAGCAGCCATGGAGATTCAGGAACCAGCCGCCAATAAGTCATTGGAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATACCTATCCAGTTGCTGTaGGTCTTGCCTACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIPIQLL*VLPTPR
Trigger: CCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGG...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCAGAAGGCTACCTGGATCTAGATGGGATAAATGTAACAGAAAAGGCCTCCACTACTCACACTGAACAGTaGGGTTGCTCAGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: AEGYLDLDGINVTEKASTTHTEQ*GCSVKG
Trigger: ACCCTTCACTGAGCAACCCAACTGTTCAGTGTGAGT...AGTGGAGGCCTTTTCTGTTACATTTATCCCATCTAGATCCAGGTAGCCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGCATTGCTGGGGCCTGTaGCTGAGGCTTATGACACTG +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQHCWGL*LRLMTL
Trigger: CAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATG...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp GCGCCTTTCTGGCCTCCGAATGTCTTTAACCTGGTAAAAATTCTGCGGGCCTATCTTCCTGTTCTTTCATaGGGGCATCACTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: APFWPPNVFNLVKILRAYLPVLS*GHHSQF
Trigger: AAATTGAGAGTGATGCCCCAATGAAAGAACAGGAAG...ATAGGCCCGCAGAATTTTTACCAGGTTAAAGACATTCGGAGGCCAGAAAGGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGGCTGCATTTGAACGCTaGGCAATAGTGCTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQAAFER*AIVLCR
Trigger: GCGACAGAGCACTATTGCCAAGCGTTCAAATGCAGC...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTGTCATCCTGAAGGTTaGCTGTTTCATGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: DPAEMEEDPTTDVSISADCHPEG*LFHGTL
Trigger: TAGAGTCCCATGAAACAGCAAACCTTCAGGATGACA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCATTGCTGGGGCCTGTaGCTGAGGCTTATGACACTG +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDHCWGL*LRLMTL
Trigger: CAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAGGCCTGGTCATATACTaGACCAGTGGTGCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVGLVIY*TSGAQK
Trigger: CTTTTGGGCACCACTGGTCAAGTATATGACCAGGCC...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTGGCCTGGTCATATACTaGACCAGTGGTGCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: APKGIRYISLTCFMLLAAGLVIY*TSGAQK
Trigger: CTTTTGGGCACCACTGGTCAAGTATATGACCAGGCC...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCAGTTGCTGTTGGTCTaGCCTACCCCAAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFQLLLV*PTPRVT
Trigger: AGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCAGTTGCTGTTGGTCTaGCCTACCCCAAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDQLLLV*PTPRVT
Trigger: AGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAAAGGAGTCCACAGTTaGAGTCCCGGGCACAAAAGC +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQKGVHS*SPGHKS
Trigger: GCTTTTGTGCCCGGGACTCAAACTGTGGACTCCTTT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS CCA 90 bp CAGTGTCATGCTTCTCCCAGGTCCATCAAAAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACCCAAAGGAATAAGGTACATATCTTT +
Preference number: 5 (lower is better)
Translates to: QCHASPRSIKRHKRV*NFICGTQRNKVHIF
Trigger: AAAGATATGTACCTTATTCCTTTGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGAGAAGCATGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505138.1
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCTGCATTTGAACGCTaGGCAATAGTGCTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDAAFER*AIVLCR
Trigger: GCGACAGAGCACTATTGCCAAGCGTTCAAATGCAGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGGACTATTGGTTTTCATaGCTGGGGCCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQDYWFS*LGPVAE
Trigger: CTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTC...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACTCATTGTCTGAATGTTaGCGAGCTACTCCTACAACA +
Preference number: 5 (lower is better)
Translates to: DPAEMEEDPTTDVSISADSLSEC*RATPTT
Trigger: TGTTGTAGGAGTAGCTCGCAAACATTCAGACAATGA...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTCAGGTGGCAATGCTATaGGTGGTGCACTTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLQVAML*VVHFQE
Trigger: CTCCTGAAAGTGCACCACCAATAGCATTGCCACCTG...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCTGTTAAGTGCTCCTaGTTGTGTGACAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSVKCS*LCDRPG
Trigger: GCCTGGCCTGTCACACAACAAGGAGCACTTAACAGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGTGAAAAGTTTGTACTaGTTCTGGGGCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIVKSLY*FWGWCF
Trigger: GAAGCACCAGCCCCAGAACAAGTACAAACTTTTCAC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGGGAACCATGGGATTTaGAGCAAAGCCAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCGNHGI*SKAKAW
Trigger: CCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCCC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCGGGCCTATATACCTaGATGCTTGTGAGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDAGLYT*MLVRED
Trigger: GTCCTCTCTCACAAGCATCAAGGTATATAGGCCCGC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCAGTTGCTGTTGGTCTaGCCTACCCCAAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNQLLLV*PTPRVT
Trigger: AGTGACCCTTGGGGTAGGCAAGACCAACAGCAACTG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCTATCCAGTTGCTGTaGGTCTTGCCTACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPIQLL*VLPTPR
Trigger: CCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCCCTATCCAGTTGCTGTaGGTCTTGCCTACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIPIQLL*VLPTPR
Trigger: CCTTGGGGTAGGCAAGACCAACAGCAACTGGATAGG...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTGTGGTCCCTATCTTaGTGGTACCTATCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVWSLS*WYLSLS
Trigger: GGACAGGGATAGGTACCACAAAGATAGGGACCACAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAGGTACCACTTCAATTaGTCCGCTATTTCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVRYHFN*SAISAA
Trigger: TGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGAGGTACCACTTCAATTaGTCCGCTATTTCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQRYHFN*SAISAA
Trigger: TGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCT...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTAGGTACCACTTCAATTaGTCCGCTATTTCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: APKGIRYISLTCFMLLAARYHFN*SAISAA
Trigger: TGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCT...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGGACTACCAACAGGCTaGGCTTTACATTCCATCAAA +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIGLPTG*ALHSIK
Trigger: TTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTCC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTCATTGCTGGGGCCTGTaGCTGAGGCTTATGACACTG +
Preference number: 5 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIHCWGL*LRLMTL
Trigger: CAGTGTCATAAGCCTCAGCAACAGGCCCCAGCAATG...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACAAAACCCACACTGCTaGCTGGGAGTCCACATATAT +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVQNPHC*LGVHIY
Trigger: ATATATGTGGACTCCCAGCAAGCAGTGTGGGTTTTG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTCAAAACCCACACTGCTaGCTGGGAGTCCACATATAT +
Preference number: 5 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTQNPHC*LGVHIY
Trigger: ATATATGTGGACTCCCAGCAAGCAGTGTGGGTTTTG...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp GACCCTGCAGAAATGGAAGAGGACCCTACTACTGATGTTTCTATTTCTGCTGACAAGATGCTGTCTGTGTaGACTAGTGGTATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: DPAEMEEDPTTDVSISADKMLSV*TSGIFR
Trigger: TCTAAAGATACCACTAGTCAACACAGACAGCATCTT...GTCAGCAGAAATAGAAACATCAGTAGTAGGGTCCTCTTCCATTTCTGCAGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGAGCAGGAGAGAACGTaGACTTTGGAGACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDEQERT*TLETPV
Trigger: AACAGGAGTCTCCAAAGTCAACGTTCTCTCCTGCTC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCAGGTGGCAATGCTATaGGTGGTGCACTTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNQVAML*VVHFQE
Trigger: CTCCTGAAAGTGCACCACCAATAGCATTGCCACCTG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGGCCTGGTCATATACTaGACCAGTGGTGCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNGLVIY*TSGAQK
Trigger: CTTTTGGGCACCACTGGTCAAGTATATGACCAGGCC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGGGAACCATGGGATTTaGAGCAAAGCCAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNGNHGI*SKAKAW
Trigger: CCAGGCTTTGGCTTTGCTCAAAATCCCATGGTTCCC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAAATGGCCTATCCAGTaGCTGTTGGTCTTGCCTACC +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFKWPIQ*LLVLPT
Trigger: GGTAGGCAAGACCAACAGCAACTGGATAGGCCATTT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAATGGCCTATCCAGTaGCTGTTGGTCTTGCCTACC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKWPIQ*LLVLPT
Trigger: GGTAGGCAAGACCAACAGCAACTGGATAGGCCATTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATGTGTGGTCCCTATCTTaGTGGTACCTATCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYVWSLS*WYLSLS
Trigger: GGACAGGGATAGGTACCACAAAGATAGGGACCACAC...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAGTTGCCTGTGTACTTaGGGTTGGGTGGGAAGGTAT +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCESCLCT*GWVGRY
Trigger: ATACCTTCCCACCCAACCCAAAGTACACAGGCAACT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAAACTTCGCTACAACCTaGGCGACAGAACTATCATTC +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGINFATT*ATELSF
Trigger: GAATGATAGTTCTGTCGCCAAGGTTGTAGCGAAGTT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACATTCCAGGTAAGGTaGGAGAGACAGGAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTFQVR*ERQERS
Trigger: GCTCCTTTCCTGTCTCTCCAACCTTACCTGGAATGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS GCA 90 bp CAAGACCAACAACTGTTGAACAAGGCATCTGGAAATTGGGATCATTaGTATCCAAAACAGGCAAACAGAACTGGTTACTTGCAGATCCTA +
Preference number: 5 (lower is better)
Translates to: QDQQLLNKASGNWDH*YPKQANRTGYLQIL
Trigger: TAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000494284.6
ENST00000509330.5
CDS CCA 90 bp AAAGAGCTCAACAAGATAGTGGTCTATCCTGTTGAACAAGGCATCTaGAAATTGGGATCATTGCTATCCAAAACAGGCAAACAGAACTGG +
Preference number: 5 (lower is better)
Translates to: KELNKIVVYPVEQGI*KLGSLLSKTGKQNW
Trigger: CCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGATAGACCACTATCTTGTTGAGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTACTTCATTCTCCAGGTaGGATCCTAGAAATAGGGCA +
Preference number: 5 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTTSFSR*DPRNRA
Trigger: TGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGGGACTACCAACAGGCTaGGCTTTACATTCCATCAAA +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQGLPTG*ALHSIK
Trigger: TTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTCC...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGTGTCATCCTGAAGGTTaGCTGTTTCATGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQCHPEG*LFHGTL
Trigger: TAGAGTCCCATGAAACAGCAAACCTTCAGGATGACA...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGACTATTGGTTTTCATaGCTGGGGCCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNDYWFS*LGPVAE
Trigger: CTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGCAAAACCCACACTGCTaGCTGGGAGTCCACATATAT +
Preference number: 5 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQQNPHC*LGVHIY
Trigger: ATATATGTGGACTCCCAGCAAGCAGTGTGGGTTTTG...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAACACAGACATATTCTTaGTCTTCCTCGCCCATCTGC +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCETQTYS*SSSPIC
Trigger: GCAGATGGGCGAGGAAGACAAAGAATATGTCTGTGT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACACAGACATATTCTTaGTCTTCCTCGCCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTQTYS*SSSPIC
Trigger: GCAGATGGGCGAGGAAGACAAAGAATATGTCTGTGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCGGTGCCCAAAAGGCTTaGAAGTATATCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCGAQKA*KYIIHR
Trigger: CCTGTGGATGATATACTTCAAAGCCTTTTGGGCACC...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGGTGCCCAAAAGGCTTaGAAGTATATCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDGAQKA*KYIIHR
Trigger: CCTGTGGATGATATACTTCAAAGCCTTTTGGGCACC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTCTGTTAAGTGCTCCTaGTTGTGTGACAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: NKVFTTAHITIYVSFSYISVKCS*LCDRPG
Trigger: GCCTGGCCTGTCACACAACAAGGAGCACTTAACAGA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCCTCCTGTAAGGGTTTaGCTTGTTCTGCTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDPPVRV*LVLLEK
Trigger: CTTCTCAAGCAGAACAAGCAAAACCCTTACAGGAGG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGTGAAAAGTTTGTACTaGTTCTGGGGCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDVKSLY*FWGWCF
Trigger: GAAGCACCAGCCCCAGAACAAGTACAAACTTTTCAC...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTCATGGGTGAAAAGTTaGTACTTGTTCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSWVKS*YLFWGW
Trigger: CCAGCCCCAGAACAAGTACAAACTTTTCACCCATGA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCATGGGTGAAAAGTTaGTACTTGTTCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSWVKS*YLFWGW
Trigger: CCAGCCCCAGAACAAGTACAAACTTTTCACCCATGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGTCCACCACTGCAGGTaGGAAAGCAGTTACTGCTGT +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVVHHCR*ESSYCC
Trigger: ACAGCAGTAACTGCTTTCCAACCTGCAGTGGTGGAC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCACTTCATTCTCCAGGTaGGATCCTAGAAATAGGGCA +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFTSFSR*DPRNRA
Trigger: TGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACTTCATTCTCCAGGTaGGATCCTAGAAATAGGGCA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTSFSR*DPRNRA
Trigger: TGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTCAAGACCAACAACTGTaGAACAAGGCATCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTQDQQL*NKASGN
Trigger: ATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTTG...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGGTACCACTTCAATTaGTCCGCTATTTCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRYHFN*SAISAA
Trigger: TGCAGCCGAAATAGCGGACAAATTGAAGTGGTACCT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTGTCATCCTGAAGGTTaGCTGTTTCATGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFCHPEG*LFHGTL
Trigger: TAGAGTCCCATGAAACAGCAAACCTTCAGGATGACA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGTCATCCTGAAGGTTaGCTGTTTCATGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDCHPEG*LFHGTL
Trigger: TAGAGTCCCATGAAACAGCAAACCTTCAGGATGACA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTAGTAAGAAACGCTACTaGACTGGCTGTTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTSKKRY*TGCFCH
Trigger: ATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTACT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGACTATTGGTTTTCATaGCTGGGGCCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVDYWFS*LGPVAE
Trigger: CTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTGACTATTGGTTTTCATaGCTGGGGCCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NKVFTTAHITIYVSFSYIDYWFS*LGPVAE
Trigger: CTCAGCAACAGGCCCCAGCAATGAAAACCAATAGTC...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCAAAACCCACACTGCTaGCTGGGAGTCCACATATAT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNQNPHC*LGVHIY
Trigger: ATATATGTGGACTCCCAGCAAGCAGTGTGGGTTTTG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAGCTTTTCACACTCCATaGTTTTATCTCCACTATGGA +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIAFHTP*FYLHYG
Trigger: TCCATAGTGGAGATAAAACAATGGAGTGTGAAAAGC...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAGAATGTCTGACACTTaGCCTGATCTGATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDRMSDT*PDLICR
Trigger: TCTGCAGATCAGATCAGGCAAAGTGTCAGACATTCT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTACTTCCTGTTCTTTCATaGGGGCATCACTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVLPVLS*GHHSQF
Trigger: AAATTGAGAGTGATGCCCCAATGAAAGAACAGGAAG...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATAATACTTTCTGCTTCATaGTCTGAATGTTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGIILSAS*SECLRA
Trigger: AGCTCGCAAACATTCAGACAATGAAGCAGAAAGTAT...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGAGAGAACGTTGACTTaGGAGACTCCTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLERTLT*ETPVSP
Trigger: AGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGAGAGAACGTTGACTTaGGAGACTCCTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNERTLT*ETPVSP
Trigger: AGGAGAAACAGGAGTCTCCAAAGTCAACGTTCTCTC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTCCAGAGTAGTAGGTaGATTCTCCCAGCCAATCAA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFQSSR*ILPANQ
Trigger: TTGATTGGCTGGGAGAATCAACCTACTACTCTGGAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGGTGCCCAAAAGGCTTaGAAGTATATCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNGAQKA*KYIIHR
Trigger: CCTGTGGATGATATACTTCAAAGCCTTTTGGGCACC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCCTCCTGTAAGGGTTTaGCTTGTTCTGCTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNPPVRV*LVLLEK
Trigger: CTTCTCAAGCAGAACAAGCAAAACCCTTACAGGAGG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTAAATGGCCTATCCAGTaGCTGTTGGTCTTGCCTACC +
Preference number: 5 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPKWPIQ*LLVLPT
Trigger: GGTAGGCAAGACCAACAGCAACTGGATAGGCCATTT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCATCTTGCTGACACCTaGATCTTACCCAGTGAGATC +
Preference number: 5 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYHLADT*ILPSEI
Trigger: GATCTCACTGGGTAAGATCAAGGTGTCAGCAAGATG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCTCCAAACGCAGAAAATaGTGCTTGCAGAATAGGCAG +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSKRRK*CLQNRQ
Trigger: CTGCCTATTCTGCAAGCACAATTTTCTGCGTTTGGA...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCAGTCTGTGTCCTGTTaGAATAATCTTTGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDQSVSC*NNLCLH
Trigger: GTGGAGGCAAAGATTATTCAAACAGGACACAGACTG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATGGCACAACTTTTTCTaGCAGATGTTTGCCAGATTG +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVWHNFF*QMFARL
Trigger: CAATCTGGCAAACATCTGCAAGAAAAAGTTGTGCCA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS CCA 90 bp ATGACGTTATTAGGAATGAAAGTAGCAGGTTGTTTGCACTCTAACTaGTACTCCACTCTGTCATTCCACTTGTACAAACTAGGAACACAA +
Preference number: 5 (lower is better)
Translates to: MTLLGMKVAGCLHSN*YSTLSFHLYKLGTQ
Trigger: TTGTGTTCCTAGTTTGTACAAGTGGAATGACAGAGTGGAGTACCAGTTAGAGTGCAAACAACCTGCTACTTTCATTCCTAATAACGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCAAGACCAACAACTGTaGAACAAGGCATCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDQDQQL*NKASGN
Trigger: ATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTTG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262043.8
ENST00000393387.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGGACTACCAACAGGCTaGGCTTTACATTCCATCAAA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNGLPTG*ALHSIK
Trigger: TTTGATGGAATGTAAAGCCAAGCCTGTTGGTAGTCC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAAGTAAGAAACGCTACTaGACTGGCTGTTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCESKKRY*TGCFCH
Trigger: ATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTACT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCACCCAAAGGAATAAGGTACATATCTTTAACCTGCTTCATGTTGTTAGCAGCTGAATTCAACTGTAGCTaGGTTTTCCAAAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: APKGIRYISLTCFMLLAAEFNCS*VFQSIW
Trigger: CCAGATACTTTGGAAAACCAAGCTACAGTTGAATTC...AGCTGCTAACAACATGAAGCAGGTTAAAGATATGTACCTTATTCCTTTGGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCTTCTTTTTCATCTCTaGCTTCTCATGAGTACCTGG +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFLLFHL*LLMSTW
Trigger: CCAGGTACTCATGAGAAGCAAGAGATGAAAAAGAAG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTTTTTGTGGCAACTTTaGCTGCCTTTTCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCFLWQL*LPFPLV
Trigger: TACCAGAGGAAAAGGCAGCAAAAGTTGCCACAAAAA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTTTTTGTGGCAACTTTaGCTGCCTTTTCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDFLWQL*LPFPLV
Trigger: TACCAGAGGAAAAGGCAGCAAAAGTTGCCACAAAAA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ACTAATACACATAGGAGGGCAAGAGCACATCTTCTTACATCTGTTATTCAATGCTCATTGTCTGAATGTTaGCGAGCTACTCCTACAACA +
Preference number: 5 (lower is better)
Translates to: TNTHRRARAHLLTSVIQCSLSEC*RATPTT
Trigger: TGTTGTAGGAGTAGCTCGCAAACATTCAGACAATGA...GCATTGAATAACAGATGTAAGAAGATGTGCTCTTGCCCTCCTATGTGTATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGCCACAGAAGGCATGTaGATAAAACCTTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNATEGM*IKPFQM
Trigger: CATCTGGAAAGGTTTTATCAACATGCCTTCTGTGGC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ATAATAAAAGCAGGAAGAGTTGGTGCAGAAGGCTACCTGGATCTAGATGGGATATTGCAAATTATTCTCTaGATCTTCCTGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: IIKAGRVGAEGYLDLDGILQIIL*IFLKLS
Trigger: AGACAGCTTCAGGAAGATCAAGAGAATAATTTGCAA...TATCCCATCTAGATCCAGGTAGCCTTCTGCACCAACTCTTCCTGCTTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATGCATGGAGAACTATTaGAAGTCTGGTTATCTTGCA +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVCMENY*KSGYLA
Trigger: TGCAAGATAACCAGACTTCAAATAGTTCTCCATGCA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTTCATGGGTGAAAAGTTaGTACTTGTTCTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPSWVKS*YLFWGW
Trigger: CCAGCCCCAGAACAAGTACAAACTTTTCACCCATGA...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATAAATCCAAACATGCTTaGTGGGGGAAAATTAGGAGG +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDKSKHA*WGKIRR
Trigger: CCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCGCAGAAAATTGTGCTaGCAGAATAGGCAGACAATA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDRRKLC*QNRQTI
Trigger: TATTGTCTGCCTATTCTGCAAGCACAATTTTCTGCG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTTCTGAATGCCTCATaGCAACTTCAGATGCTGGAT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLLNAS*QLQMLD
Trigger: ATCCAGCATCTGAAGTTGCAATGAGGCATTCAGAAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCTGGTTTGTGTTCACTaGCAGGCCACAAAGTATATT +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFLVCVH*QATKYI
Trigger: AATATACTTTGTGGCCTGCAAGTGAACACAAACCAG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCAAAAGATAACTGGTTaGTGTTCACTTGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYQKITG*CSLAGH
Trigger: GTGGCCTGCAAGTGAACACAAACCAGTTATCTTTTG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp CTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGACTAAGTGTTTGGCTTTTTaGCAGATGCAGTGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: LTCDNDKIFPCMSAVGQTKCLAF*QMQWLN
Trigger: ATTTAGCCACTGCATCTGCAAAAAAGCCAAACACTT...AGTCTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAGTAAGAAACGCTACTaGACTGGCTGTTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSKKRY*TGCFCH
Trigger: ATGACAGAAACAGCCAGTCAAGTAGCGTTTCTTACT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TGTCTAACCTGTGACAATGACAAAATATTTCCATGTATGTCAGCTGTTGGCCAGCAGTACAGAATGAGCTaGGTTTTTCACAGATTTAAC +
Preference number: 5 (lower is better)
Translates to: CLTCDNDKIFPCMSAVGQQYRMS*VFHRFN
Trigger: GTTAAATCTGTGAAAAACCAAGCTCATTCTGTACTG...CTGGCCAACAGCTGACATACATGGAAATATTTTGTCATTGTCACAGGTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS-3UTR CAA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGGCTTTTCACACTCCATaGTTTTATCTCCACTATGGA +
Preference number: 5 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQAFHTP*FYLHYG
Trigger: TCCATAGTGGAGATAAAACAATGGAGTGTGAAAAGC...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTTCTTTTTCATCTCTaGCTTCTCATGAGTACCTGG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLLFHL*LLMSTW
Trigger: CCAGGTACTCATGAGAAGCAAGAGATGAAAAAGAAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCTTCCTGTTCTTTCATaGGGGCATCACTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLPVLS*GHHSQF
Trigger: AAATTGAGAGTGATGCCCCAATGAAAGAACAGGAAG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp CAATCATTTCTATGGTATGTCTGTTTTCTCTTCGTCTCCAAGCAGCTAACTCTTCGACCTATGCAGATTTaGCAGTTGAGATCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: QSFLWYVCFLFVSKQLTLRPMQI*QLRSKR
Trigger: TCTTTTTGATCTCAACTGCAAAATCTGCATAGGTCG...AAGAGTTAGCTGCTTGGAGACGAAGAGAAAACAGACATACCATAGAAATGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTCATTGTCTGAATGTTaGCGAGCTACTCCTACAACA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNSLSEC*RATPTT
Trigger: TGTTGTAGGAGTAGCTCGCAAACATTCAGACAATGA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGCCACAGAAGGCATGTaGATAAAACCTTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVATEGM*IKPFQM
Trigger: CATCTGGAAAGGTTTTATCAACATGCCTTCTGTGGC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTGCCACAGAAGGCATGTaGATAAAACCTTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPATEGM*IKPFQM
Trigger: CATCTGGAAAGGTTTTATCAACATGCCTTCTGTGGC...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTCCAGAGTAGTAGGTaGATTCTCCCAGCCAATCAA +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVFQSSR*ILPANQ
Trigger: TTGATTGGCTGGGAGAATCAACCTACTACTCTGGAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTGCATGGAGAACTATTaGAAGTCTGGTTATCTTGCA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDCMENY*KSGYLA
Trigger: TGCAAGATAACCAGACTTCAAATAGTTCTCCATGCA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATAAATCCAAACATGCTTaGTGGGGGAAAATTAGGAGG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNKSKHA*WGKIRR
Trigger: CCTCCTAATTTTCCCCCACAAAGCATGTTTGGATTT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACTTACAGGTTTTTGGTaGTGTCTTCTGACTCACACT +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLLTGFW*CLLTHT
Trigger: AGTGTGAGTCAGAAGACACAACCAAAAACCTGTAAG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCCTGGTGATAATGGTGTaGACGATTTCCTATGTGAAA +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFLVIMV*TISYVK
Trigger: TTTCACATAGGAAATCGTCAACACCATTATCACCAG...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATATCTGTGATAATTTaGCCACTTGGCAACCGGCAA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNISVII*PLGNRQ
Trigger: TTGCCGGTTGCCAAGTGGCAAAATTATCACAGATAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTATATTTCTTTGATACATaGCTTACGGGGAATCAACTG +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVYFFDT*LTGNQL
Trigger: CAGTTGATTCCCCGTAAGCAATGTATCAAAGAAATA...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTGAGAGGAGAGGAGAACAGGCTGGTAAGAGCTAAATCCTTATCTTTTATAGTAAAAATAGCAGTTAACTaGGGAGAAAGAATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VRGEENRLVRAKSLSFIVKIAVN*GERISV
Trigger: CACAGAGATTCTTTCTCCCAAGTTAACTGCTATTTT...TACTATAAAAGATAAGGATTTAGCTCTTACCAGCCTGTTCTCCTCTCCTCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAATGATTTTCTGGCAATaGGTCTCCATAATCAGACCT +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEMIFWQ*VSIIRP
Trigger: AGGTCTGATTATGGAGACCAATTGCCAGAAAATCAT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCATCATTTTCTTACAGTaGCCTGTGTACTTTGGGTTG +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFIIFLQ*PVYFGL
Trigger: CAACCCAAAGTACACAGGCAACTGTAAGAAAATGAT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATGCTGGATGGTATTaGTTCCTATTTCTTCACACG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNDAGWY*FLFLHT
Trigger: CGTGTGAAGAAATAGGAACAAATACCATCCAGCATC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATCAGTACAGAATGAGCTaGGTTTTTCACAGATTTAAC +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDQYRMS*VFHRFN
Trigger: GTTAAATCTGTGAAAAACCAAGCTCATTCTGTACTG...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAGAATTCAACTGTAGCTaGGTTTTCCAAAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLEFNCS*VFQSIW
Trigger: CCAGATACTTTGGAAAACCAAGCTACAGTTGAATTC...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGAATTCAACTGTAGCTaGGTTTTCCAAAGTATCTGG +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNEFNCS*VFQSIW
Trigger: CCAGATACTTTGGAAAACCAAGCTACAGTTGAATTC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGCTTTTCACACTCCATaGTTTTATCTCCACTATGGA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNAFHTP*FYLHYG
Trigger: TCCATAGTGGAGATAAAACAATGGAGTGTGAAAAGC...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATTCCCGTTTTAAAATTTaGACCTTGTGCTTCACTGTA +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDSRFKI*TLCFTV
Trigger: TACAGTGAAGCACAAGGTCAAAATTTTAAAACGGGA...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTTTTTTGTGGCAACTTTaGCTGCCTTTTCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPFLWQL*LPFPLV
Trigger: TACCAGAGGAAAAGGCAGCAAAAGTTGCCACAAAAA...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATATGCAGATTTTGCAGTaGAGATCAAAAAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDMQILQ*RSKRCC
Trigger: ACAGCATCTTTTTGATCTCAACTGCAAAATCTGCAT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTACGACCTATGCAGATTTaGCAGTTGAGATCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLRPMQI*QLRSKR
Trigger: TCTTTTTGATCTCAACTGCAAAATCTGCATAGGTCG...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCGACCTATGCAGATTTaGCAGTTGAGATCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNRPMQI*QLRSKR
Trigger: TCTTTTTGATCTCAACTGCAAAATCTGCATAGGTCG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATACTTTCTGCTTCATaGTCTGAATGTTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNILSAS*SECLRA
Trigger: AGCTCGCAAACATTCAGACAATGAAGCAGAAAGTAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCATACTTTCTGCTTCATaGTCTGAATGTTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIILSAS*SECLRA
Trigger: AGCTCGCAAACATTCAGACAATGAAGCAGAAAGTAT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAACCACACAAATTTCCTaGGTTCCTGATGCTTTTATT +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCETTQIS*VPDAFI
Trigger: AATAAAAGCATCAGGAACCAAGGAAATTTGTGTGGT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATGATACCACACAAATTTCCTaGGTTCCTGATGCTTTTATT +
Preference number: 5 (lower is better)
Translates to: KCTPWASDSWSKTAQLNDTTQIS*VPDAFI
Trigger: AATAAAAGCATCAGGAACCAAGGAAATTTGTGTGGT...ATCATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTGCATGGAGAACTATTaGAAGTCTGGTTATCTTGCA +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNCMENY*KSGYLA
Trigger: TGCAAGATAACCAGACTTCAAATAGTTCTCCATGCA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTTGTGCAACTTTTAAATTGTCACTCTGCTGAACACACGAGTTTTTCTCTGCAGTTTTGCTTGTTCTGCTaGAGAAGTCTGTATGTTTTC +
Preference number: 5 (lower is better)
Translates to: FVQLLNCHSAEHTSFSLQFCLFC*RSLYVF
Trigger: GAAAACATACAGACTTCTCAAGCAGAACAAGCAAAA...CTGCAGAGAAAAACTCGTGTGTTCAGCAGAGTGACAATTTAAAAGTTGCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GGGATATTTAGAGTTATATTGGATTCACTGCCCTTTGAGTGCTTAGGCTATTTCAGTCAGAGTACCAAATaGCGATGGTGTAAAAGTTTT +
Preference number: 5 (lower is better)
Translates to: GIFRVILDSLPFECLGYFSQSTK*RWCKSF
Trigger: AAAACTTTTACACCATCGCAATTTGGTACTCTGACT...GAAATAGCCTAAGCACTCAAAGGGCAGTGAATCCAATATAACTCTAAATATCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GCTTCCTATTTTTGCTATCCTGGTGATAATGGTGTTGACGATTTCCTATGTGAAATGATCATCAGGCTTTaGCTTCTTTTTCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: ASYFCYPGDNGVDDFLCEMIIRL*LLFLIL
Trigger: GAGAATGAGAAAAAGAAGCAAAAGCCTGATGATCAT...TTCACATAGGAAATCGTCAACACCATTATCACCAGGATAGCAAAAATAGGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTTTCTTGCAGATGTTaGCCAGATTGGGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVFSCRC*PDWAGN
Trigger: ATTTCCAGCCCAATCTGGCAAACATCTGCAAGAAAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATCAGTACAGAATGAGCTaGGTTTTTCACAGATTTAAC +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNQYRMS*VFHRFN
Trigger: GTTAAATCTGTGAAAAACCAAGCTCATTCTGTACTG...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATATGCAGATTTTGCAGTaGAGATCAAAAAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNMQILQ*RSKRCC
Trigger: ACAGCATCTTTTTGATCTCAACTGCAAAATCTGCAT...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCATGCAGATTTTGCAGTaGAGATCAAAAAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: FMRWHIYFSRIITLMLRIMQILQ*RSKRCC
Trigger: ACAGCATCTTTTTGATCTCAACTGCAAAATCTGCAT...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTGCAAATTATTCTCTaGATCTTCCTGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNLQIIL*IFLKLS
Trigger: AGACAGCTTCAGGAAGATCAAGAGAATAATTTGCAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTCATGAGATGGCACATCTATTTCTCCCGGATTATTACACTTATGCTTAGAATCTTGCAAATTATTCTCTaGATCTTCCTGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FMRWHIYFSRIITLMLRILQIIL*IFLKLS
Trigger: AGACAGCTTCAGGAAGATCAAGAGAATAATTTGCAA...GATTCTAAGCATAAGTGTAATAATCCGGGAGAAATAGATGTGCCATCTCATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTATTTTGCTTGTTCTGCTaGAGAAGTCTGTATGTTTTC +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLFCLFC*RSLYVF
Trigger: GAAAACATACAGACTTCTCAAGCAGAACAAGCAAAA...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AATAAATGTACCCCTTGGGCTTCTGATTCTTGGTCAAAAACTGCTCAACTAAATTTTTGCTTGTTCTGCTaGAGAAGTCTGTATGTTTTC +
Preference number: 5 (lower is better)
Translates to: NKCTPWASDSWSKTAQLNFCLFC*RSLYVF
Trigger: GAAAACATACAGACTTCTCAAGCAGAACAAGCAAAA...ATTTAGTTGAGCAGTTTTTGACCAAGAATCAGAAGCCCAAGGGGTACATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509876.5
CDS-3UTR CAA 90 bp TTTTATTTCTTTCAAGGGTGTTCTCAGTTTTATCAGCAATACCCATGGTATCCTAAGTTGCTTGGATTTTaGTTGCTCCTCTACAGTTTC +
Preference number: 5 (lower is better)
Translates to: FYFFQGCSQFYQQYPWYPKLLGF*LLLYSF
Trigger: GAAACTGTAGAGGAGCAACAAAAATCCAAGCAACTT...AGGATACCATGGGTATTGCTGATAAAACTGAGAACACCCTTGAAAGAAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATTGGAACTTTCCCATTTaGCTCATCATTGAATTCCAA +
Preference number: 5 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYWNFPI*LIIEFQ
Trigger: TTGGAATTCAATGATGAGCAAAATGGGAAAGTTCCA...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTGAAGCCTGTTGCTTTTaGCTTATGAACCTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVEACCF*LMNLVE
Trigger: TTCTACAAGGTTCATAAGCAAAAAGCAACAGGCTTC...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp CTACAACCTTGGCGACAGAACTATCATTCTAGAAACTCTCCAAAAAGTAACTATCTCCATAATCAGACCTaGAAAATAGCAGTTAACTTG +
Preference number: 5 (lower is better)
Translates to: LQPWRQNYHSRNSPKSNYLHNQT*KIAVNL
Trigger: CAAGTTAACTGCTATTTTCAAGGTCTGATTATGGAG...ATAGTTACTTTTTGGAGAGTTTCTAGAATGATAGTTCTGTCGCCAAGGTTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAATGCTTTTTCCAAGCTaGCAGAATTGCCTTTACTTT +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLMLFPS*QNCLYF
Trigger: AAAGTAAAGGCAATTCTGCAAGCTTGGAAAAAGCAT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp GTTATAATCCTCCCAACGTGTATAAAAAGGCCTAGTCATTGCAATGTGAAGTTAATTAGTTTCACACGATaGATGCTGCATTTGACACTT +
Preference number: 5 (lower is better)
Translates to: VIILPTCIKRPSHCNVKLISFTR*MLHLTL
Trigger: AAGTGTCAAATGCAGCATCAATCGTGTGAAACTAAT...TAACTTCACATTGCAATGACTAGGCCTTTTTATACACGTTGGGAGGATTATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTCAGTACAGAATGAGCTaGGTTTTTCACAGATTTAAC +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVQYRMS*VFHRFN
Trigger: GTTAAATCTGTGAAAAACCAAGCTCATTCTGTACTG...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTTCCCGTTTTAAAATTTaGACCTTGTGCTTCACTGTA +
Preference number: 5 (lower is better)
Translates to: NKVFTTAHITIYVSFSYISRFKI*TLCFTV
Trigger: TACAGTGAAGCACAAGGTCAAAATTTTAAAACGGGA...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp AACAAGGTTTTCACTACAGCTCACATTACCATCTATGTTTCCTTTTCCTACATTACCACACAAATTTCCTaGGTTCCTGATGCTTTTATT +
Preference number: 5 (lower is better)
Translates to: NKVFTTAHITIYVSFSYITTQIS*VPDAFI
Trigger: AATAAAAGCATCAGGAACCAAGGAAATTTGTGTGGT...AATGTAGGAAAAGGAAACATAGATGGTAATGTGAGCTGTAGTGAAAACCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS-3UTR CAA 90 bp ATCTTTGCCTCCACCAATCTTTATGTATACCTGACCAATCATTTTCTTACAGTTTTGCTTGGATTTTTGTaGCTCCTCTACAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IFASTNLYVYLTNHFLTVLLGFL*LLYSFF
Trigger: AAAGAAACTGTAGAGGAGCAACAAAAATCCAAGCAA...AACTGTAAGAAAATGATTGGTCAGGTATACATAAAGATTGGTGGAGGCAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS GCA 72 bp GTTGCAGCCGCCGCCGCCCTGAGCCCGAAGGTCGCTTaGCGCGTGGGGACGGTGCGACGGCGCGAGACCCCG +
Preference number: 6 (lower is better)
Translates to: VAAAAALSPKVA*RVGTVRRRETP
Trigger: CGGGGTCTCGCGCCGTCGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCTCAGGGCGGCGGCGGCTGCAAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262043.8
ENST00000481385.6
ENST00000494284.6
ENST00000506783.5
ENST00000515594.5
CDS CAA 72 bp CGTTGCAGCCGCCGCCGCCCTGAGCCCGAAGGTCGCTaGCCGCGTGGGGACGGTGCGACGGCGCGAGACCCC +
Preference number: 6 (lower is better)
Translates to: RCSRRRPEPEGR*PRGDGATARDP
Trigger: GGGGTCTCGCGCCGTCGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCTCAGGGCGGCGGCGGCTGCAACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262043.8
ENST00000481385.6
ENST00000494284.6
ENST00000506783.5
ENST00000515594.5
CDS GCA 72 bp AGAAGGAAGAGGCCCCAACGGCCGGATCCGGGGGCCTaGGAGACGGGCCTTCCAGGCAGCGCCCGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: RRKRPQRPDPGA*ETGLPGSARRA
Trigger: GGCACGGCGGGCGCTGCCTGGAAGGCCCGTCTCGCAGGCCCCCGGATCCGGCCGTTGGGGCCTCTTCCTTCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS CAA 90 bp CCTAATCCTCGTTGCAGCCGCCGCCGCCCTGAGCCCGAAGGTCGCTaGCCGCGTGGGGACGGTGCGACGGCGCGAGACCCCGCAGCCATC +
Preference number: 6 (lower is better)
Translates to: PNPRCSRRRPEPEGR*PRGDGATARDPAAI
Trigger: GATGGCTGCGGGGTCTCGCGCCGTCGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCTCAGGGCGGCGGCGGCTGCAACGAGGATTAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262043.8
ENST00000481385.6
ENST00000494284.6
ENST00000506783.5
ENST00000515594.5
CDS TCA 72 bp CGAAACCAAGGCCCAAAGCTCCATGCTGGGGCTCCCTaGGAAGGAAGAGGCCCCAACGGCCGGATCCGGGGG +
Preference number: 6 (lower is better)
Translates to: RNQGPKLHAGAP*EGRGPNGRIRG
Trigger: CCCCCGGATCCGGCCGTTGGGGCCTCTTCCTTCTCAGGGAGCCCCAGCATGGAGCTTTGGGCCTTGGTTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS GCA 72 bp TATTCTTGGCTTCCGCGCCGCCCTCCTAATCCTCGTTaGAGCCGCCGCCGCCCTGAGCCCGAAGGTCGCTTG +
Preference number: 6 (lower is better)
Translates to: YSWLPRRPPNPR*SRRRPEPEGRL
Trigger: CAAGCGACCTTCGGGCTCAGGGCGGCGGCGGCTGCAACGAGGATTAGGAGGGCGGCGCGGAAGCCAAGAATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262043.8
ENST00000481385.6
ENST00000494284.6
ENST00000506783.5
ENST00000515594.5
CDS CCA 72 bp CTTTCAGCCCCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LSAPAPPDERYH*QQEEDGGRCRR
Trigger: GCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGGGCTGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262043.8
CDS CCA 72 bp GGTTGGATCCCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GWIPAPPDERYH*QQEEDGGRCRR
Trigger: GCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGGATCCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494284.6
CDS CCA 72 bp GACCAACAACCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: DQQPAPPDERYH*QQEEDGGRCRR
Trigger: GCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGTTGTTGGTC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481385.6
ENST00000515594.5
CDS CCA 72 bp TTACTTGTTCCAGCTCCGCCAGACGAGCGCTACCACTaGCAGCAAGAGGAAGATGGTGGACGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LLVPAPPDERYH*QQEEDGGRCRR
Trigger: GCGGCGGCAGCGTCCACCATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGAACAAGTAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506783.5
CDS CCA 72 bp AAGTTCGCACTGAGAAGGATGGCCATTTCAGAGGACTaGGAAATCCTGAGGGCCACCCAAATGCTGGACGCA +
Preference number: 6 (lower is better)
Translates to: KFALRRMAISED*EILRATQMLDA
Trigger: TGCGTCCAGCATTTGGGTGGCCCTCAGGATTTCCCAGTCCTCTGAAATGGCCATCCTTCTCAGTGCGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420043.1
ENST00000505138.1
CDS GCA 72 bp CCACCCAAATGCTGGACGCAGTGTTGGCCAGTGTCATaGTTCTCCCTGCAGTTTAATGAAATGTGGCAATGG +
Preference number: 6 (lower is better)
Translates to: PPKCWTQCWPVS*FSLQFNEMWQW
Trigger: CCATTGCCACATTTCATTAAACTGCAGGGAGAAGCATGACACTGGCCAACACTGCGTCCAGCATTTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS TCA 72 bp TTCTCATTTCAAACTAAGCAAAAGGAGTCCACAGTTTaGGTCCCGGGCACAAAAGCGCGCGGTAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: FSFQTKQKESTV*VPGTKARGNWR
Trigger: CCTCCAGTTACCGCGCGCTTTTGTGCCCGGGACTCAAACTGTGGACTCCTTTTGCTTAGTTTGAAATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509330.5
CDS CCA 72 bp GCTTCTCCCAGGTCCATCAAAAGGCACAAGAGGGTGTaGAATTTTATCTGTGGCACCCAAAGGAATAAGGTA +
Preference number: 6 (lower is better)
Translates to: ASPRSIKRHKRV*NFICGTQRNKV
Trigger: TACCTTATTCCTTTGGGTGCCACAGATAAAATTCCACACCCTCTTGTGCCTTTTGATGGACCTGGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505138.1
CDS TCA 72 bp TCTTCAAGGCTGTATTTTCACTCTTCAAGTTCGCACTaGGAAGGATGGCCATTTCAGAGGACTGGGAAATCC +
Preference number: 6 (lower is better)
Translates to: SSRLYFHSSSSH*EGWPFQRTGKS
Trigger: GGATTTCCCAGTCCTCTGAAATGGCCATCCTTCTCAGTGCGAACTTGAAGAGTGAAAATACAGCCTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420043.1
ENST00000505138.1
CDS GCA 72 bp CAACTGTTGAACAAGGCATCTGGAAATTGGGATCATTaGTATCCAAAACAGGCAAACAGAACTGGTTACTTG +
Preference number: 6 (lower is better)
Translates to: QLLNKASGNWDH*YPKQANRTGYL
Trigger: CAAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000494284.6
ENST00000509330.5
CDS GCA 72 bp ATCCTGTTGAACAAGGCATCTGGAAATTGGGATCATTaGTATCCAAAACAGGCAAACAGAACTGGTTACTTG +
Preference number: 6 (lower is better)
Translates to: ILLNKASGNWDH*YPKQANRTGYL
Trigger: CAAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS CAA 72 bp CTTGCACTAAAATCCTCACAGACTTCATTCTCCAGGTaGGATCCTAGAAATAGGGCATCATCTAAGTGTTCA +
Preference number: 6 (lower is better)
Translates to: LALKSSQTSFSR*DPRNRASSKCS
Trigger: TGAACACTTAGATGATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGTCTGTGAGGATTTTAGTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000509330.5
ENST00000509876.5
CDS CAA 72 bp TCAAGACCAACAACTGTTGAACAAGGCATCTGGAAATaGGGATCATTGCTATCCAAAACAGGCAAACAGAAC +
Preference number: 6 (lower is better)
Translates to: SRPTTVEQGIWK*GSLLSKTGKQN
Trigger: GTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000494284.6
ENST00000509330.5
CDS CAA 72 bp AGTATGACGTTATTAGGAATGAAAGTAGCAGGTTGTTaGCACTCTAACTGGTACTCCACTCTGTCATTCCAC +
Preference number: 6 (lower is better)
Translates to: SMTLLGMKVAGC*HSNWYSTLSFH
Trigger: GTGGAATGACAGAGTGGAGTACCAGTTAGAGTGCAAACAACCTGCTACTTTCATTCCTAATAACGTCATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS CAA 72 bp ATAGTGGTCTATCCTGTTGAACAAGGCATCTGGAAATaGGGATCATTGCTATCCAAAACAGGCAAACAGAAC +
Preference number: 6 (lower is better)
Translates to: IVVYPVEQGIWK*GSLLSKTGKQN
Trigger: GTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGATAGACCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS CAA 90 bp CTCAACAAGATAGTGGTCTATCCTGTTGAACAAGGCATCTGGAAATaGGGATCATTGCTATCCAAAACAGGCAAACAGAACTGGTTACTT +
Preference number: 6 (lower is better)
Translates to: LNKIVVYPVEQGIWK*GSLLSKTGKQNWLL
Trigger: AAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGATAGACCACTATCTTGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS CCA 72 bp ATATCGTCAAGACCAACAACTGTTGAACAAGGCATCTaGAAATTGGGATCATTGCTATCCAAAACAGGCAAA +
Preference number: 6 (lower is better)
Translates to: ISSRPTTVEQGI*KLGSLLSKTGK
Trigger: TTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTTGACGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000494284.6
ENST00000509330.5
CDS CCA 72 bp TTAGGAATGAAAGTAGCAGGTTGTTTGCACTCTAACTaGTACTCCACTCTGTCATTCCACTTGTACAAACTA +
Preference number: 6 (lower is better)
Translates to: LGMKVAGCLHSN*YSTLSFHLYKL
Trigger: TAGTTTGTACAAGTGGAATGACAGAGTGGAGTACCAGTTAGAGTGCAAACAACCTGCTACTTTCATTCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS CCA 72 bp AACAAGATAGTGGTCTATCCTGTTGAACAAGGCATCTaGAAATTGGGATCATTGCTATCCAAAACAGGCAAA +
Preference number: 6 (lower is better)
Translates to: NKIVVYPVEQGI*KLGSLLSKTGK
Trigger: TTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGATAGACCACTATCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509876.5
CDS CAA 90 bp ATAATATCGTCAAGACCAACAACTGTTGAACAAGGCATCTGGAAATaGGGATCATTGCTATCCAAAACAGGCAAACAGAACTGGTTACTT +
Preference number: 6 (lower is better)
Translates to: IISSRPTTVEQGIWK*GSLLSKTGKQNWLL
Trigger: AAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGTTGTTGGTCTTGACGATATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262043.8
ENST00000393387.5
ENST00000494284.6
ENST00000509330.5
CDS CAA 90 bp ACCACACAAAGGCTTACATATTGGGATTTGCTTTCATATGTAGGTTaGAGCCCCTTTAGAAAGGGCAATAGTAAAGCTACACAATTTGAC +
Preference number: 6 (lower is better)
Translates to: TTQRLTYWDLLSYVG*SPFRKGNSKATQFD
Trigger: GTCAAATTGTGTAGCTTTACTATTGCCCTTTCTAAAGGGGCTCAAACCTACATATGAAAGCAAATCCCAATATGTAAGCCTTTGTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS CAA 72 bp AGGCTTACATATTGGGATTTGCTTTCATATGTAGGTTaGAGCCCCTTTAGAAAGGGCAATAGTAAAGCTACA +
Preference number: 6 (lower is better)
Translates to: RLTYWDLLSYVG*SPFRKGNSKAT
Trigger: TGTAGCTTTACTATTGCCCTTTCTAAAGGGGCTCAAACCTACATATGAAAGCAAATCCCAATATGTAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS CAA 90 bp TGTTTAGTAAGTATGACGTTATTAGGAATGAAAGTAGCAGGTTGTTaGCACTCTAACTGGTACTCCACTCTGTCATTCCACTTGTACAAA +
Preference number: 6 (lower is better)
Translates to: CLVSMTLLGMKVAGC*HSNWYSTLSFHLYK
Trigger: TTTGTACAAGTGGAATGACAGAGTGGAGTACCAGTTAGAGTGCAAACAACCTGCTACTTTCATTCCTAATAACGTCATACTTACTAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420043.1
CDS CAA 72 bp GAAATGTTAACCACACAAAGGCTTACATATTGGGATTaGCTTTCATATGTAGGTTTGAGCCCCTTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: EMLTTQRLTYWD*LSYVGLSPFRK
Trigger: CTTTCTAAAGGGGCTCAAACCTACATATGAAAGCAAATCCCAATATGTAAGCCTTTGTGTGGTTAACATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420043.1