RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF24 (Homo sapiens)

Ensembl gene IDs: ENSG00000122733

Ensembl transcript IDs: ENST00000242315.3, ENST00000440503.1, ENST00000476115.2, ENST00000486477.1

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGCTTGGAGGCCAGGCTTGGTGCTCTTGTGGCAGCCTCTGATTaGCCCAAAAGGCCTTCCATGCCAGGCCCAAGCCCTAGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: WGLEARLGALVAASD*PKRPSMPGPSPSLL
Trigger: CAGCAGGCTAGGGCTTGGGCCTGGCATGGAAGGCCTTTTGGGGCAATCAGAGGCTGCCACAAGAGCACCAAGCCTGGCCTCCAAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp GCAGGTCCCGTCTATGATGTGGGGCAGGGGCGGTCCAGGAGAGGATaGTGCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCAC +
Preference number: 1 (lower is better)
Translates to: AGPVYDVGQGRSRRG*CHSSQGFSLWQCIH
Trigger: GTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGCAGCATCCTCTCCTGGACCGCCCCTGCCCCACATCATAGACGGGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp AGTTCTCAGTCCTGCTTGAAGTTTCTCTTGGCTCTGGGGTGGGCCTaGCTGGCCTGGGGCCTTGCCAGGCAGCTTCTGCTGACCTTCCCT +
Preference number: 1 (lower is better)
Translates to: SSQSCLKFLLALGWA*LAWGLARQLLLTFP
Trigger: AGGGAAGGTCAGCAGAAGCTGCCTGGCAAGGCCCCAGGCCAGCCAGGCCCACCCCAGAGCCAAGAGAAACTTCAAGCAGGACTGAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp TCCAAATGGGCCTGTTCCTGTTGTGGAAGAACTCTGGGGCTGCTTTaGCAGGCCCTGGAATACGGCAGGCCTGACCTGGCCCACCAACTC +
Preference number: 1 (lower is better)
Translates to: SKWACSCCGRTLGLL*QALEYGRPDLAHQL
Trigger: GAGTTGGTGGGCCAGGTCAGGCCTGCCGTATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTTCTTCCACAACAGGAACAGGCCCATTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 90 bp GCAGCATGTGCACATGTATATAAGTGTGGTGGCAGGTCCCGTCTATaGTGTGGGGCAGGGGCGGTCCAGGAGAGGATGCTGCCACAGCTC +
Preference number: 1 (lower is better)
Translates to: AACAHVYKCGGRSRL*CGAGAVQERMLPQL
Trigger: GAGCTGTGGCAGCATCCTCTCCTGGACCGCCCCTGCCCCACATCATAGACGGGACCTGCCACCACACTTATATACATGTGCACATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp GTCGGTGACTTGGGTGAAGCATCTAACACAGAGGGCTGTGGCTCCTaGCAGTGTGTTTGCTCCATTCAGGCCCCCTTGGCCCTAGGCCAT +
Preference number: 1 (lower is better)
Translates to: VGDLGEASNTEGCGS*QCVCSIQAPLALGH
Trigger: ATGGCCTAGGGCCAAGGGGGCCTGAATGGAGCAAACACACTGGCAGGAGCCACAGCCCTCTGTGTTAGATGCTTCACCCAAGTCACCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp CAGTCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATaGGTGAATATCCCCCACTCCAGGAGATCTCGCCATTGTCTGGGT +
Preference number: 1 (lower is better)
Translates to: QSHPTPGLSCQEQAR*VNIPHSRRSRHCLG
Trigger: ACCCAGACAATGGCGAGATCTCCTGGAGTGGGGGATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp GACCTGACTGAGAGGTTCCTAGAATCCCGAGTCCCTGGGAAGGGCTaGCTCCCCCTCTTCCAGTCAGGATTCTCCAGGCTAGTTGCCTTT +
Preference number: 1 (lower is better)
Translates to: DLTERFLESRVPGKG*LPLFQSGFSRLVAF
Trigger: AAAGGCAACTAGCCTGGAGAATCCTGACTGGAAGAGGGGGAGGCAGCCCTTCCCAGGGACTCGGGATTCTAGGAACCTCTCAGTCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp GGTGAAGCATCTAACACAGAGGGCTGTGGCTCCTGCCAGTGTGTTTaGTCCATTCAGGCCCCCTTGGCCCTAGGCCATGAGCTACCATCT +
Preference number: 1 (lower is better)
Translates to: GEASNTEGCGSCQCV*SIQAPLALGHELPS
Trigger: AGATGGTAGCTCATGGCCTAGGGCCAAGGGGGCCTGAATGGAGCAAACACACTGGCAGGAGCCACAGCCCTCTGTGTTAGATGCTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp TCTTCCTCCAGAGTGTGCTCTCGTCAGTCTCTGTGGTCGGTGACTTaGGTGAAGCATCTAACACAGAGGGCTGTGGCTCCTGCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: SSSRVCSRQSLWSVT*VKHLTQRAVAPASV
Trigger: CACACTGGCAGGAGCCACAGCCCTCTGTGTTAGATGCTTCACCCAAGTCACCGACCACAGAGACTGACGAGAGCACACTCTGGAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp AACATGCTTTCAGGATCACTAGAGCCAGCTACCAGTTCTCAGTCCTaGTTGAAGTTTCTCTTGGCTCTGGGGTGGGCCTGGCTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: NMLSGSLEPATSSQS*LKFLLALGWAWLAW
Trigger: CCAGGCCAGCCAGGCCCACCCCAGAGCCAAGAGAAACTTCAAGCAGGACTGAGAACTGGTAGCTGGCTCTAGTGATCCTGAAAGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CGGTCCAGGAGAGGATGCTGCCACAGCTCCCAGGGCTTCTCCTTGTaGCAATGCATTCACTGCCTCTATTGTGAGGGGAATGGTGATTTC +
Preference number: 1 (lower is better)
Translates to: RSRRGCCHSSQGFSL*QCIHCLYCEGNGDF
Trigger: GAAATCACCATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGCAGCATCCTCTCCTGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp TCTGGAATAGGGAGAAGCGTGATCCAAATGGGCCTGTTCCTGTTGTaGAAGAACTCTGGGGCTGCTTTGCCAGGCCCTGGAATACGGCAG +
Preference number: 1 (lower is better)
Translates to: SGIGRSVIQMGLFLL*KNSGAALPGPGIRQ
Trigger: CTGCCGTATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTTCTTCCACAACAGGAACAGGCCCATTTGGATCACGCTTCTCCCTATTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 90 bp TCACAAACTTGGGTTTGGCTGGGGGACAGATCACAGGCCAACCCATaGTGGCAGGAGGCTAATCTTGAGGGCCTTTGTGTCACCATGGCT +
Preference number: 1 (lower is better)
Translates to: SQTWVWLGDRSQANP*WQEANLEGLCVTMA
Trigger: AGCCATGGTGACACAAAGGCCCTCAAGATTAGCCTCCTGCCATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp AGGAGAGGATGCTGCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATaGATTCACTGCCTCTATTGTGAGGGGAATGGTGATTTCAGTGCC +
Preference number: 1 (lower is better)
Translates to: RRGCCHSSQGFSLWQ*IHCLYCEGNGDFSA
Trigger: GGCACTGAAATCACCATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGCAGCATCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CCTGGGATCTCTGTAGCAGGCCCTCACCCAGGAAGTTTGCTGTTCTaGAATAGGGAGAAGCGTGATCCAAATGGGCCTGTTCCTGTTGTG +
Preference number: 1 (lower is better)
Translates to: PGISVAGPHPGSLLF*NREKRDPNGPVPVV
Trigger: CACAACAGGAACAGGCCCATTTGGATCACGCTTCTCCCTATTCCAGAACAGCAAACTTCCTGGGTGAGGGCCTGCTACAGAGATCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp TCTTGTGGGATGGGAACTCTACTCTTTGCTGAGGGAAGTGTCCCCTaGGATCTCTGTAGCAGGCCCTCACCCAGGAAGTTTGCTGTTCTG +
Preference number: 1 (lower is better)
Translates to: SCGMGTLLFAEGSVP*DLCSRPSPRKFAVL
Trigger: CAGAACAGCAAACTTCCTGGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAGAGTTCCCATCCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp TGGCTGCTCCTTCGTGCTTTCCTGCTTCCTAGGACTCTTGTGGGATaGGAACTCTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCT +
Preference number: 1 (lower is better)
Translates to: WLLLRAFLLPRTLVG*ELYSLLREVSPGIS
Trigger: AGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAGAGTTCCCATCCCACAAGAGTCCTAGGAAGCAGGAAAGCACGAAGGAGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp ACTCTGACTGAAGCTGTGAAACCTGCAATGGCCGAGGTTGTGCTTTaGGCTATGAGTCCTGGGTATAACCTTGGGGCTCACTCCCCCAAG +
Preference number: 1 (lower is better)
Translates to: TLTEAVKPAMAEVVL*AMSPGYNLGAHSPK
Trigger: CTTGGGGGAGTGAGCCCCAAGGTTATACCCAGGACTCATAGCCCAAAGCACAACCTCGGCCATTGCAGGTTTCACAGCTTCAGTCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp AATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATaGCCCGTCTGTGAGATCGAGCAGCCCAAGGCCAGTGGCACAGGA +
Preference number: 1 (lower is better)
Translates to: NAIQLSKPRACLYSK*PVCEIEQPKASGTG
Trigger: TCCTGTGCCACTGGCCTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CAGAGCCTCTTCTTAAGCCCCAGCCTCTTATCCTGTTTGTCAGGATaGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGG +
Preference number: 1 (lower is better)
Translates to: QSLFLSPSLLSCLSG*LKESLLRALQIFLG
Trigger: CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAAACAGGATAAGAGGCTGGGGCTTAAGAAGAGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp GAAGAATTTGAATTTGATGAGTACTTAGGAAGGAGGGCTGGGGCTTaGAGGCCAGGCTTGGTGCTCTTGTGGCAGCCTCTGATTGCCCCA +
Preference number: 1 (lower is better)
Translates to: EEFEFDEYLGRRAGA*RPGLVLLWQPLIAP
Trigger: TGGGGCAATCAGAGGCTGCCACAAGAGCACCAAGCCTGGCCTCCAAGCCCCAGCCCTCCTTCCTAAGTACTCATCAAATTCAAATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp ACCCAGTGCTATAGAAACTGGAATGTGATTGGGCTTCTTAGTCACTaGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTG +
Preference number: 1 (lower is better)
Translates to: TQCYRNWNVIGLLSH*PRPELTPFPCSGSL
Trigger: CAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCAGTGACTAAGAAGCCCAATCACATTCCAGTTTCTATAGCACTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp TTGCTCAAGTGTTCTCAGAGTCCCTCTCACAAACTTGGGTTTGGCTaGGGGACAGATCACAGGCCAACCCATGATGGCAGGAGGCTAATC +
Preference number: 1 (lower is better)
Translates to: LLKCSQSPSHKLGFG*GTDHRPTHDGRRLI
Trigger: GATTAGCCTCCTGCCATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 90 bp CTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGTCTACAGTTGAGTTaGGCTGGAATGATGAGGAAGCAGAGCCCCGTTCTCTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: LCRSFLGCGRCLQLS*AGMMRKQSPVLSSS
Trigger: GGAAGAGGAGAGAACGGGGCTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGATCTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CAGATCTTTCTTGGGCTGTGGAAGGTGTCTACAGTTGAGTTGAGCTaGAATGATGAGGAAGCAGAGCCCCGTTCTCTCCTCTTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: QIFLGLWKVSTVELS*NDEEAEPRSLLFLQ
Trigger: CTGGAGGAAGAGGAGAGAACGGGGCTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp TTCCCCTTTGGTAAAAAGCTAGATGACTGCCTGTGGAGAAGAGGCTaGCTGCTCCTTCGTGCTTTCCTGCTTCCTAGGACTCTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: FPFGKKLDDCLWRRG*LLLRAFLLPRTLVG
Trigger: TCCCACAAGAGTCCTAGGAAGCAGGAAAGCACGAAGGAGCAGCCAGCCTCTTCTCCACAGGCAGTCATCTAGCTTTTTACCAAAGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 90 bp CTGCCTTTTAGGGCCACACATCTGTCTGTCTTCACTCTGCTGGTCTaGAGGGAACATGCTTTCAGGATCACTAGAGCCAGCTACCAGTTC +
Preference number: 1 (lower is better)
Translates to: LPFRATHLSVFTLLV*REHAFRITRASYQF
Trigger: GAACTGGTAGCTGGCTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACAGATGTGTGGCCCTAAAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp TGCTGCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTaGCTCTATTGTGAGGGGAATGGTGATTTCAGTGCCTTAAAGCTT +
Preference number: 1 (lower is better)
Translates to: CCHSSQGFSLWQCIH*LYCEGNGDFSALKL
Trigger: AAGCTTTAAGGCACTGAAATCACCATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp CCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATaGCCCCTTCCTAAGAATCACTTGGCCAGAGACTTATCTATTGGA +
Preference number: 1 (lower is better)
Translates to: PLGSPGALGRHASLT*PLPKNHLARDLSIG
Trigger: TCCAATAGATAAGTCTCTGGCCAAGTGATTCTTAGGAAGGGGGCATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CCTTTCTCAACCAAAAAGAACCAGGCTTCTGAAGGCATGGACAGCTaGGCAGCATGTGCACATGTATATAAGTGTGGTGGCAGGTCCCGT +
Preference number: 1 (lower is better)
Translates to: PFSTKKNQASEGMDS*AACAHVYKCGGRSR
Trigger: ACGGGACCTGCCACCACACTTATATACATGTGCACATGCTGCCCAGCTGTCCATGCCTTCAGAAGCCTGGTTCTTTTTGGTTGAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTaGAAGGTGTCTACAGTTGAGTTGAGCTGGAATGATGAGGAAGCA +
Preference number: 1 (lower is better)
Translates to: LKESLLRALQIFLGL*KVSTVELSWNDEEA
Trigger: TGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CTCGCTATGCCTAAGTCATTAAGTTGGAAACAGAAGCCTAGAACATaGACCCCACGGCCGGCCAAGATGAGCCATAACACACGGACTGAA +
Preference number: 1 (lower is better)
Translates to: LAMPKSLSWKQKPRT*TPRPAKMSHNTRTE
Trigger: TTCAGTCCGTGTGTTATGGCTCATCTTGGCCGGCCGTGGGGTCCATGTTCTAGGCTTCTGTTTCCAACTTAATGACTTAGGCATAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp CTGTTCTGCCTTTTAGGGCCACACATCTGTCTGTCTTCACTCTGCTaGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCCAGCTACC +
Preference number: 1 (lower is better)
Translates to: LFCLLGPHICLSSLC*SEGNMLSGSLEPAT
Trigger: GGTAGCTGGCTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACAGATGTGTGGCCCTAAAAGGCAGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp ACAGCCGAGGTACATAATGCACACCTACTAGTAACAGCAGCTGACTaGAGAAGGGATTTTTGGTGGAGAAAGCGGGGCCCATTAGGATCT +
Preference number: 1 (lower is better)
Translates to: TAEVHNAHLLVTAAD*RRDFWWRKRGPLGS
Trigger: AGATCCTAATGGGCCCCGCTTTCTCCACCAAAAATCCCTTCTGCAGTCAGCTGCTGTTACTAGTAGGTGTGCATTATGTACCTCGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp AGGGACTGTGGTGACAGTCCTGAAGTTCTGGCATCAAAACTGTTCTaGCTTTTAGGGCCACACATCTGTCTGTCTTCACTCTGCTGGTCT +
Preference number: 1 (lower is better)
Translates to: RDCGDSPEVLASKLF*LLGPHICLSSLCWS
Trigger: AGACCAGCAGAGTGAAGACAGACAGATGTGTGGCCCTAAAAGGCAGAACAGTTTTGATGCCAGAACTTCAGGACTGTCACCACAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp AATGGTGATTTCAGTGCCTTAAAGCTTAGTGACAAGTTAAGACGCTaGCAGTGTCCCAACCCCATGAGTCTCTGTGCCAGAGGTTGGTGG +
Preference number: 1 (lower is better)
Translates to: NGDFSALKLSDKLRR*QCPNPMSLCARGWW
Trigger: CCACCAACCTCTGGCACAGAGACTCATGGGGTTGGGACACTGCCAGCGTCTTAACTTGTCACTAAGCTTTAAGGCACTGAAATCACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 90 bp AAACTGTTCTGCCTTTTAGGGCCACACATCTGTCTGTCTTCACTCTaGTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCCAGCT +
Preference number: 1 (lower is better)
Translates to: KLFCLLGPHICLSSL*WSEGNMLSGSLEPA
Trigger: AGCTGGCTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACAGATGTGTGGCCCTAAAAGGCAGAACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 90 bp GTTGGAAACAGAAGCCTAGAACATGGACCCCACGGCCGGCCAAGATaGGCCATAACACACGGACTGAAGAATTTGAATTTGATGAGTACT +
Preference number: 1 (lower is better)
Translates to: VGNRSLEHGPHGRPR*AITHGLKNLNLMST
Trigger: AGTACTCATCAAATTCAAATTCTTCAGTCCGTGTGTTATGGCTCATCTTGGCCGGCCGTGGGGTCCATGTTCTAGGCTTCTGTTTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 90 bp GGCAAGTGGGCTTCAGAGGAGCCTGTCTATAACCCAGGCCTTCCTTaGTTAGAAACACTGATCTCAATTTTGGGTAGCCACAAAGAAAAG +
Preference number: 1 (lower is better)
Translates to: GKWASEEPVYNPGLP*LETLISILGSHKEK
Trigger: CTTTTCTTTGTGGCTACCCAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTCCTCTGAAGCCCACTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 90 bp GATGGCAGGAGGCTAATCTTGAGGGCCTTTGTGTCACCATGGCTATaGAAAGGCCTGGCTACTTATAACTTGATGTTCTTAACTGTGGGT +
Preference number: 1 (lower is better)
Translates to: DGRRLILRAFVSPWL*KGLATYNLMFLTVG
Trigger: ACCCACAGTTAAGAACATCAAGTTATAAGTAGCCAGGCCTTTTCATAGCCATGGTGACACAAAGGCCCTCAAGATTAGCCTCCTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTGGCAGGTCCCGTCTATaGTGTGGGGCAGGGGCGGTC +
Preference number: 2 (lower is better)
Translates to: WRKRGPLGSPGALGRHASGRSRL*CGAGAV
Trigger: GACCGCCCCTGCCCCACATCATAGACGGGACCTGCC...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCTGACCCTCGGTCCCTaGAGCTCCACCACATCCTCC +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVLTLGP*SSTTSS
Trigger: GGAGGATGTGGTGGAGCTGCAGGGACCGAGGGTCAG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGAGAATCCCGAGTCCCTaGGAAGGGCTGCCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVRIPSP*EGLPPP
Trigger: AGGGGGAGGCAGCCCTTCCCAGGGACTCGGGATTCT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGGTCCCGTCTATGATGTaGGGCAGGGGCGGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: AGPIRISRSSRQACESDMVPSMM*GRGGPG
Trigger: TCCTGGACCGCCCCTGCCCCACATCATAGACGGGAC...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGGGCGTCTGCAACTCTaGACTTGGGGAGCAACGGCA +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVGRLQL*TWGATA
Trigger: TGCCGTTGCTCCCCAAGTCCAGAGTTGCAGACGCCC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGTCTGTTGGGGAAGGCTaGGCTCAGGAGAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVSVGEG*AQERKP
Trigger: TGGCTTCCTCTCCTGAGCCCAGCCTTCCCCAACAGA...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCAGGAACAGGCACGATaGGTGAATATCCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVQEQAR*VNIPHS
Trigger: GGAGTGGGGGATATTCACGCATCGTGCCTGTTCCTG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp GCTCCATCCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTaGGGGAAGGCTGGGCTCAGGAGAGGAAGCCAAGGAGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: APSLGYSRGPCSSVL*GKAGLRRGSQGADL
Trigger: CAAGTCTGCTCCTTGGCTTCCTCTCCTGAGCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCTGCTTTGCCAGGCCCTaGAATACGGCAGGCCTGACC +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNICFARP*NTAGLT
Trigger: GGTCAGGCCTGCCGTATTCCAGGGCCTGGCAAAGCA...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp GGGCGGTCCAGGAGAGGATGCTGCCACAGCTCCCAGGGCTTCTCCTaGTGGCAATGCATTCACTGCCTCTATTGTGAGGGGAATGGTGAT +
Preference number: 2 (lower is better)
Translates to: GRSRRGCCHSSQGFS*WQCIHCLYCEGNGD
Trigger: ATCACCATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGCAGCATCCTCTCCTGGACCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp ATGCTTTCAGGATCACTAGAGCCAGCTACCAGTTCTCAGTCCTGCTaGAAGTTTCTCTTGGCTCTGGGGTGGGCCTGGCTGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: MLSGSLEPATSSQSC*KFLLALGWAWLAWG
Trigger: GCCCCAGGCCAGCCAGGCCCACCCCAGAGCCAAGAGAAACTTCAAGCAGGACTGAGAACTGGTAGCTGGCTCTAGTGATCCTGAAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp ACAGGCACGATGCGTGAATATCCCCCACTCCAGGAGATCTCGCCATaGTCTGGGTTGCAGCCAGGGGCCCAGACAGATATCCTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: TGTMREYPPLQEISP*SGLQPGAQTDILGK
Trigger: TTTGCCCAGGATATCTGTCTGGGCCCCTGGCTGCAACCCAGACAATGGCGAGATCTCCTGGAGTGGGGGATATTCACGCATCGTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCAGTGTCCCAACCCCATaGGTCTCTGTGCCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPSVPTP*VSVPEV
Trigger: AACCTCTGGCACAGAGACTCATGGGGTTGGGACACT...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGCACGGCCGGCCAAGATaGGCCATAACACACGGACTG +
Preference number: 2 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKHGRPR*AITHGL
Trigger: CAGTCCGTGTGTTATGGCTCATCTTGGCCGGCCGTG...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCAGCTCTAGGCAGGCATaGGAGTCTGACATGCCCCCT +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNISSRQA*ESDMPP
Trigger: AGGGGGCATGTCAGACTCGCATGCCTGCCTAGAGCT...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCTCTCGTCAGTCTCTGTaGTCGGTGACTTGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGSRQSL*SVTWVK
Trigger: CTTCACCCAAGTCACCGACCACAGAGACTGACGAGA...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCTGCAACTCTGGACTTaGGGAGCAACGGCACTTCCC +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNILQLWT*GATALP
Trigger: GGGAAGTGCCGTTGCTCCCCAAGTCCAGAGTTGCAG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp CTCTTCCTCCAGAGTGTGCTCTCGTCAGTCTCTGTGGTCGGTGACTaGGGTGAAGCATCTAACACAGAGGGCTGTGGCTCCTGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: LFLQSVLSSVSVVGD*GEASNTEGCGSCQC
Trigger: ACACTGGCAGGAGCCACAGCCCTCTGTGTTAGATGCTTCACCCAAGTCACCGACCACAGAGACTGACGAGAGCACACTCTGGAGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp GAGGAGACTACACAGGGCTCTCAAGAAGCCCCTGGCCGCAGCTCCTaGCTTTCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: EETTQGSQEAPGRSS*LSSKHSAPSGVCSS
Trigger: AGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGAAAGCAAGGAGCTGCGGCCAGGGGCTTCTTGAGAGCCCTGTGTAGTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCGAAGAACTCTGGGGCTaGTTTGCCAGGCCCTGGAAT +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIEELWG*FARPWN
Trigger: ATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTTCTTC...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCGACAAGTTAAGACGCTaGCAGTGTCCCAACCCCATG +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPDKLRR*QCPNPM
Trigger: CATGGGGTTGGGACACTGCCAGCGTCTTAACTTGTC...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCAAGAAGGCTCACCTTaGTTTTTGACTACCCTGCTA +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVQEGSP*FLTTLL
Trigger: TAGCAGGGTAGTCAAAAATCAAGGTGAGCCTTCTTG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCGTGTTTGCTTCTGCATaGCTGCACTCCACTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPVFASA*LHSTPF
Trigger: AAAGGGAGTGGAGTGCAGTCATGCAGAAGCAAACAC...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCATCCTGGGGGACGGCTaGAGAGCATTTCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPILGDG*RAFLKA
Trigger: AGCTTTTAGAAATGCTCTTCAGCCGTCCCCCAGGAT...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGACAGTTGAGTTGAGCTaGAATGATGAGGAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVTVELS*NDEEAE
Trigger: CTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCAGAAGCCTAGAACATaGACCCCACGGCCGGCCAAG +
Preference number: 2 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTQKPRT*TPRPAK
Trigger: CTTGGCCGGCCGTGGGGTCCATGTTCTAGGCTTCTG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCACCGCAGAGGGGCTCTaGGGATTAGAACACTGCAAA +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNITAEGL*GLEHCK
Trigger: TTTGCAGTGTTCTAATCCCCAGAGCCCCTCTGCGGT...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGAACCCAGGCCTTCCTTaGTTAGAAACACTGATCTCA +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVNPGLP*LETLIS
Trigger: TGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp CCTTCTCTGCAGAGCCTCTTCTTAAGCCCCAGCCTCTTATCCTGTTaGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATC +
Preference number: 2 (lower is better)
Translates to: PSLQSLFLSPSLLSC*SGWLKESLLRALQI
Trigger: GATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAAACAGGATAAGAGGCTGGGGCTTAAGAAGAGGCTCTGCAGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp CCGTGGAGAGCTAGAGGCAGCAGCTCCAAAGAGGTAGGCATCACCTaGATCTGTGAAGGATCAGGGAACAAGATGGACTTCCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: PWRARGSSSKEVGIT*ICEGSGNKMDFQSL
Trigger: CAGGGACTGGAAGTCCATCTTGTTCCCTGATCCTTCACAGATCAAGGTGATGCCTACCTCTTTGGAGCTGCTGCCTCTAGCTCTCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp GAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCAGGAAGTTaGCTGTTCTGGAATAGGGAGAAGCGTGATCCAAATGGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: EVSPGISVAGPHPGS*LFWNREKRDPNGPV
Trigger: AACAGGCCCATTTGGATCACGCTTCTCCCTATTCCAGAACAGCAAACTTCCTGGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp AAGTGTTGCTCAAGTGTTCTCAGAGTCCCTCTCACAAACTTGGGTTaGGCTGGGGGACAGATCACAGGCCAACCCATGATGGCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: KCCSSVLRVPLTNLG*AGGQITGQPMMAGG
Trigger: GCCTCCTGCCATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGAGCAACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCACTCCACTCCCTTTTaGATAACTCTTGGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGHSTPF*ITLGSQ
Trigger: CTGACTACCAAGAGTTATTCAAAAGGGAGTGGAGTG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCGTAACAGCAGCTGACTaGAGAAGGGATTTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPVTAAD*RRDFWW
Trigger: CCACCAAAAATCCCTTCTGCAGTCAGCTGCTGTTAC...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGAGGCTTCTGAAGGCATaGACAGCTGGGCAGCATGTG +
Preference number: 2 (lower is better)
Translates to: LSGWLKESLLRALQIFLGRLLKA*TAGQHV
Trigger: CACATGCTGCCCAGCTGTCCATGCCTTCAGAAGCCT...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGTGCAGAAGGGATTTTTaGTGGAGAAAGCGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKCRRDF*WRKRGP
Trigger: TGGGCCCCGCTTTCTCCACCAAAAATCCCTTCTGCA...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCGATCAGGGAACAAGATaGACTTCCAGTCCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIDQGTR*TSSPCD
Trigger: GTCACAGGGACTGGAAGTCCATCTTGTTCCCTGATC...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGGAAGTTTGCTGTTCTaGAATAGGGAGAAGCGTGAT +
Preference number: 2 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGGSLLF*NREKRD
Trigger: ATCACGCTTCTCCCTATTCCAGAACAGCAAACTTCC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp ATGCGTGAATATCCCCCACTCCAGGAGATCTCGCCATTGTCTGGGTaGCAGCCAGGGGCCCAGACAGATATCCTGGGCAAATTCAAACTA +
Preference number: 2 (lower is better)
Translates to: MREYPPLQEISPLSG*QPGAQTDILGKFKL
Trigger: TAGTTTGAATTTGCCCAGGATATCTGTCTGGGCCCCTGGCTGCAACCCAGACAATGGCGAGATCTCCTGGAGTGGGGGATATTCACGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp CATGGGAAGGGCATGAGGGACCAGAGCGCATTGGATTCCCAAGTGTaGCTCAAGTGTTCTCAGAGTCCCTCTCACAAACTTGGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: HGKGMRDQSALDSQV*LKCSQSPSHKLGFG
Trigger: GCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGAGCAACACTTGGGAATCCAATGCGCTCTGGTCCCTCATGCCCTTCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGCTGAATTTCAGTGGTaGTGTTTAACTCTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVAEFQW*CLTLFP
Trigger: TGGGAAAAGAGTTAAACATCACCACTGAAATTCAGC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCATTTCAGAGTCACAGTaGTGGGAGGGCTTGAAAACG +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIISESQ*WEGLKT
Trigger: CGTTTTCAAGCCCTCCCATCACTGTGACTCTGAAAT...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTCCTGCCAGTGTGTTTaGTCCATTCAGGCCCCCTTG +
Preference number: 2 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTSCQCV*SIQAPL
Trigger: CAAGGGGGCCTGAATGGAGCAAACACACTGGCAGGA...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGGAGGGCTGTGGCTCCTaGCAGTGTGTTTGCTCCATT +
Preference number: 2 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTEGCGS*QCVCSI
Trigger: AATGGAGCAAACACACTGGCAGGAGCCACAGCCCTC...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTCAAGCCCTAGCCTGCTaGGGAAGGACATGTGATGAG +
Preference number: 2 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFQALAC*GRTCDE
Trigger: CTCATCACATGTCCTTCCCCAGCAGGCTAGGGCTTG...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp GCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGTCTACAGTTGAGTaGAGCTGGAATGATGAGGAAGCAGAGCCCCGTTCTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ALQIFLGLWKVSTVE*SWNDEEAEPRSLLF
Trigger: GAAGAGGAGAGAACGGGGCTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGATCTGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp ATTCCCAAGTGTTGCTCAAGTGTTCTCAGAGTCCCTCTCACAAACTaGGGTTTGGCTGGGGGACAGATCACAGGCCAACCCATGATGGCA +
Preference number: 2 (lower is better)
Translates to: IPKCCSSVLRVPLTN*GLAGGQITGQPMMA
Trigger: TGCCATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGAGCAACACTTGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGCTTCACTGGGTTTCTaGACGTTTTTAACAACTCTA +
Preference number: 2 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGASLGF*TFLTTL
Trigger: TAGAGTTGTTAAAAACGTTCAGAAACCCAGTGAAGC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCTGGCAATGCATTCACTaGCTCTATTGTGAGGGGAAT +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIWQCIH*LYCEGN
Trigger: ATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCA...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTCTTCCTCCAGAGTGTaGTCTCGTCAGTCTCTGTGG +
Preference number: 2 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTSSSRV*SRQSLW
Trigger: CCACAGAGACTGACGAGAGCACACTCTGGAGGAAGA...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCAGGGCTTCTCCTTGTaGCAATGCATTCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTQGFSL*QCIHCL
Trigger: GAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGGGAGCAGACTTGGAGTaGTTTTGTGGCCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEGADLE*FCGQGH
Trigger: GTGGCCCTGGCCACAAAACCACTCCAAGTCTGCTCC...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGTCTTGTGGCAGCCTCTaGTTGCCCCAAAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLESCGSL*LPQKAF
Trigger: GAAGGCCTTTTGGGGCAATCAGAGGCTGCCACAAGA...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGGTGGCAGCCTCTGATTaGCCCAAAAGGCCTTCCATG +
Preference number: 2 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEVAASD*PKRPSM
Trigger: CATGGAAGGCCTTTTGGGGCAATCAGAGGCTGCCAC...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCCAGAGACTTATCTATTaGAAATTAGAACTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPQRLIY*KLELAC
Trigger: GCAGGCCAGTTCTAATTTCCAATAGATAAGTCTCTG...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 90 bp CTTCAGATGCAGTTCTTAGGCCCAGGAGTCCTGCGCTTTCTTGTTTaGACTAGACTGAATAATGGCCCCTCCTATGGATCAATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LQMQFLGPGVLRFLV*TRLNNGPSYGSILG
Trigger: CCCCAGGATTGATCCATAGGAGGGGCCATTATTCAGTCTAGTCAAAACAAGAAAGCGCAGGACTCCTGGGCCTAAGAACTGCATCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGATTCTCCAGGCTAGTTaGCTTTTCTGTCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: LSGWLKESLLRALQIFLGILQAS*LFCHQE
Trigger: TTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAAT...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGTACTCTAGGGGCCCTTaGTCAAGTGTTCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEYSRGP*SSVLLG
Trigger: CCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTA...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCTTCCTAAGAATCACTTaGCCAGAGACTTATCTATTG +
Preference number: 2 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPFLRIT*PETYLL
Trigger: CAATAGATAAGTCTCTGGCCAAGTGATTCTTAGGAA...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGAAAGAACCAGGCTTCTaGAGGCATGGACAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: EPVYNPGLPWLETLISILKEPGF*RHGQLG
Trigger: GCCCAGCTGTCCATGCCTTCAGAAGCCTGGTTCTTT...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCGCCCAAGCCCTAGCCTaGTGGGGAAGGACATGTGAT +
Preference number: 2 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAAQALA*WGRTCD
Trigger: ATCACATGTCCTTCCCCAGCAGGCTAGGGCTTGGGC...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCCTAAGTCATTAAGTTaGAAACAGAAGCCTAGAACA +
Preference number: 2 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIPKSLS*KQKPRT
Trigger: TGTTCTAGGCTTCTGTTTCCAACTTAATGACTTAGG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR GCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGGTGCTTTCATCTCAGTaGAAAACCCCAGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: EPVYNPGLPWLETLISILVLSSQ*KTPGLA
Trigger: AGCCAGGCCTGGGGTTTTGCACTGAGATGAAAGCAC...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGAGAAGGGATTTTTGGTaGAGAAAGCGGGGCCCATTA +
Preference number: 2 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLERRDFW*RKRGPL
Trigger: TAATGGGCCCCGCTTTCTCCACCAAAAATCCCTTCT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGTTCACAAAGGGACTTTaGTCCTTTCTCAACCAAAAA +
Preference number: 2 (lower is better)
Translates to: LSGWLKESLLRALQIFLGFTKGL*SFLNQK
Trigger: TTTTTGGTTGAGAAAGGACCAAAGTCCCTTTGTGAA...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGATCTTTCTTGGGCTGTaGAAGGTGTCTACAGTTGAG +
Preference number: 2 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEIFLGL*KVSTVE
Trigger: CTCAACTGTAGACACCTTCCACAGCCCAAGAAAGAT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR TCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTAACTAGTAACAGCAGCTaGCTGCAGAAGGGATTTTTG +
Preference number: 2 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLTSNSS*LQKGFL
Trigger: CAAAAATCCCTTCTGCAGTCAGCTGCTGTTACTAGT...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp GGGGCTGCTTTGCCAGGCCCTGGAATACGGCAGGCCTaGCCTGGCCCACCAACTCTCCTCACTCACCCGTGG +
Preference number: 3 (lower is better)
Translates to: GAALPGPGIRQA*PGPPTLLTHPW
Trigger: CCACGGGTGAGTGAGGAGAGTTGGTGGGCCAGGTCAGGCCTGCCGTATTCCAGGGCCTGGCAAAGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp GGAGCAGACTTGGAGTGGTTTTGTGGCCAGGGCCACTaGTCAGCTGACCCTCGGTCCCTGCAGCTCCACCAC +
Preference number: 3 (lower is better)
Translates to: GADLEWFCGQGH*SADPRSLQLHH
Trigger: GTGGTGGAGCTGCAGGGACCGAGGGTCAGCTGAGCAGTGGCCCTGGCCACAAAACCACTCCAAGTCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TGCTTTGCCAGGCCCTGGAATACGGCAGGCCTGACCTaGCCCACCAACTCTCCTCACTCACCCGTGGAGAGC +
Preference number: 3 (lower is better)
Translates to: CFARPWNTAGLT*PTNSPHSPVES
Trigger: GCTCTCCACGGGTGAGTGAGGAGAGTTGGTGGGCCAGGTCAGGCCTGCCGTATTCCAGGGCCTGGCAAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp GCCTGTTCCTGTTGTGGAAGAACTCTGGGGCTGCTTTaGCAGGCCCTGGAATACGGCAGGCCTGACCTGGCC +
Preference number: 3 (lower is better)
Translates to: ACSCCGRTLGLL*QALEYGRPDLA
Trigger: GGCCAGGTCAGGCCTGCCGTATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTTCTTCCACAACAGGAACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp GGGACTGCTCCATCCCTGGGATACTCTAGGGGCCCTTaGTCAAGTGTTCTGTTGGGGAAGGCTGGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: GTAPSLGYSRGP*SSVLLGKAGLR
Trigger: CCTGAGCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGGATGGAGCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp AGTCACTGGCCCAGACCAGAGCTGACCCCCTTTCCATaGTCTGGGTCACTGGGGCATGTGGCCCAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: SHWPRPELTPFP*SGSLGHVAQRK
Trigger: TTTCCTCTGGGCCACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCAGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCAGACTTGGAGTGGTTTaGTGGCCAGGGCCACTGCTC +
Preference number: 3 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGRLGVV*WPGPLL
Trigger: GAGCAGTGGCCCTGGCCACAAAACCACTCCAAGTCT...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCTCCTGCCAGTGTGTTaGCTCCATTCAGGCCCCCTT +
Preference number: 3 (lower is better)
Translates to: SHPTPGLSCQEQARCVNILLPVC*LHSGPL
Trigger: AAGGGGGCCTGAATGGAGCAAACACACTGGCAGGAG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp GCACATGTATATAAGTGTGGTGGCAGGTCCCGTCTATaGTGTGGGGCAGGGGCGGTCCAGGAGAGGATGCTG +
Preference number: 3 (lower is better)
Translates to: AHVYKCGGRSRL*CGAGAVQERML
Trigger: CAGCATCCTCTCCTGGACCGCCCCTGCCCCACATCATAGACGGGACCTGCCACCACACTTATATACATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp GCCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTaGGATCGAGCAGCCCAAGGCCAGTGGCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: AQSLSLLKMPRL*DRAAQGQWHRR
Trigger: TCTCCTGTGCCACTGGCCTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp TTGGGTGAAGCATCTAACACAGAGGGCTGTGGCTCCTaGCAGTGTGTTTGCTCCATTCAGGCCCCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: LGEASNTEGCGS*QCVCSIQAPLA
Trigger: GGCCAAGGGGGCCTGAATGGAGCAAACACACTGGCAGGAGCCACAGCCCTCTGTGTTAGATGCTTCACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp ATCCCCCACTCCAGGAGATCTCGCCATTGTCTGGGTTaGAGCCAGGGGCCCAGACAGATATCCTGGGCAAAT +
Preference number: 3 (lower is better)
Translates to: IPHSRRSRHCLG*SQGPRQISWAN
Trigger: ATTTGCCCAGGATATCTGTCTGGGCCCCTGGCTGCAACCCAGACAATGGCGAGATCTCCTGGAGTGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp CCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATaGGTGAATATCCCCCACTCCAGGAGATCTCGCCAT +
Preference number: 3 (lower is better)
Translates to: PTPGLSCQEQAR*VNIPHSRRSRH
Trigger: ATGGCGAGATCTCCTGGAGTGGGGGATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp ATTAGAACACTGCAAAGGGAGATTCTGGACGGGGGTTaGGGCAGGGCGTCTGCAACTCTGGACTTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: IRTLQREILDGG*GRASATLDLGS
Trigger: GCTCCCCAAGTCCAGAGTTGCAGACGCCCTGCCCCAACCCCCGTCCAGAATCTCCCTTTGCAGTGTTCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGTCCATTCAGGCCCCCTaGGCCCTAGGCCATGAGCTA +
Preference number: 3 (lower is better)
Translates to: LSGWLKESLLRALQIFLGSIQAP*ALGHEL
Trigger: TAGCTCATGGCCTAGGGCCAAGGGGGCCTGAATGGA...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTGCTTGGAGGCCAGGCTaGGTGCTCTTGTGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFAWRPG*VLLWQP
Trigger: AGGCTGCCACAAGAGCACCAAGCCTGGCCTCCAAGC...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGAGTTCTCAGTCCTGCTaGAAGTTTCTCTTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVSSQSC*KFLLAL
Trigger: CAGAGCCAAGAGAAACTTCAAGCAGGACTGAGAACT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp TGGGTTTGGCTGGGGGACAGATCACAGGCCAACCCATaGTGGCAGGAGGCTAATCTTGAGGGCCTTTGTGTC +
Preference number: 3 (lower is better)
Translates to: WVWLGDRSQANP*WQEANLEGLCV
Trigger: GACACAAAGGCCCTCAAGATTAGCCTCCTGCCATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp ACAGGAGGAGACTACACAGGGCTCTCAAGAAGCCCCTaGCCGCAGCTCCTTGCTTTCCTCGAAACATTCAGC +
Preference number: 3 (lower is better)
Translates to: TGGDYTGLSRSP*PQLLAFLETFS
Trigger: GCTGAATGTTTCGAGGAAAGCAAGGAGCTGCGGCCAGGGGCTTCTTGAGAGCCCTGTGTAGTCTCCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGCAGAAGGGATTTTaGGTGGAGAAAGCGGGGCCC +
Preference number: 3 (lower is better)
Translates to: LSGWLKESLLRALQIFLGLQKGF*VEKAGP
Trigger: GGGCCCCGCTTTCTCCACCAAAAATCCCTTCTGCAG...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp CCTCTTGGCTTTTGGGCTTCCTGGCACCACTCTGACTaGAGCTGTGAAACCTGCAATGGCCGAGGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: PLGFWASWHHSD*SCETCNGRGCA
Trigger: AGCACAACCTCGGCCATTGCAGGTTTCACAGCTTCAGTCAGAGTGGTGCCAGGAAGCCCAAAAGCCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp CAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATaGCCCGTCTGTGAGATCGAGCAGCCCAAGGCCAGT +
Preference number: 3 (lower is better)
Translates to: QLSKPRACLYSK*PVCEIEQPKAS
Trigger: ACTGGCCTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp AGAGTGTGCTCTCGTCAGTCTCTGTGGTCGGTGACTTaGGTGAAGCATCTAACACAGAGGGCTGTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: RVCSRQSLWSVT*VKHLTQRAVAP
Trigger: AGGAGCCACAGCCCTCTGTGTTAGATGCTTCACCCAAGTCACCGACCACAGAGACTGACGAGAGCACACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TGTTCTCAGAGTCCCTCTCACAAACTTGGGTTTGGCTaGGGGACAGATCACAGGCCAACCCATGATGGCAGG +
Preference number: 3 (lower is better)
Translates to: CSQSPSHKLGFG*GTDHRPTHDGR
Trigger: CCTGCCATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGTGTCTACAGTTGAGTaGAGCTGGAATGATGAGGAA +
Preference number: 3 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGVSTVE*SWNDEE
Trigger: TTCCTCATCATTCCAGCTCAACTCAACTGTAGACAC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp TCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATaGCCCCTTCCTAAGAATCACTTGGCCAGAGACTTA +
Preference number: 3 (lower is better)
Translates to: SPGALGRHASLT*PLPKNHLARDL
Trigger: TAAGTCTCTGGCCAAGTGATTCTTAGGAAGGGGGCATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp AGAGGATGCTGCCACAGCTCCCAGGGCTTCTCCTTGTaGCAATGCATTCACTGCCTCTATTGTGAGGGGAAT +
Preference number: 3 (lower is better)
Translates to: RGCCHSSQGFSL*QCIHCLYCEGN
Trigger: ATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGCAGCATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp CTTGGGCTGTGGAAGGTGTCTACAGTTGAGTTGAGCTaGAATGATGAGGAAGCAGAGCCCCGTTCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: LGLWKVSTVELS*NDEEAEPRSLL
Trigger: GAGGAGAGAACGGGGCTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp AGATCAGTACCTAGAGTGAGGGGACTGCTCCATCCCTaGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: RSVPRVRGLLHP*DTLGALAQVFC
Trigger: ACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGGATGGAGCAGTCCCCTCACTCTAGGTACTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp GAAGCTGTGAAACCTGCAATGGCCGAGGTTGTGCTTTaGGCTATGAGTCCTGGGTATAACCTTGGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: EAVKPAMAEVVL*AMSPGYNLGAH
Trigger: GTGAGCCCCAAGGTTATACCCAGGACTCATAGCCCAAAGCACAACCTCGGCCATTGCAGGTTTCACAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp GTTGCTCAAGTGTTCTCAGAGTCCCTCTCACAAACTTaGGTTTGGCTGGGGGACAGATCACAGGCCAACCCA +
Preference number: 3 (lower is better)
Translates to: VAQVFSESLSQT*VWLGDRSQANP
Trigger: TGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTTCCCAGGGCTTCTCCTaGTGGCAATGCATTCACTGC +
Preference number: 3 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFSQGFS*WQCIHC
Trigger: GCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGA...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGCTTCACAAAGGGACTTaGGTCCTTTCTCAACCAAAA +
Preference number: 3 (lower is better)
Translates to: AGPIRISRSSRQACESDMLHKGT*VLSQPK
Trigger: TTTTGGTTGAGAAAGGACCAAAGTCCCTTTGTGAAG...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGCCAGAGACTTATCTATaGGAAATTAGAACTGGCCTG +
Preference number: 3 (lower is better)
Translates to: AGPIRISRSSRQACESDMPETYL*EIRTGL
Trigger: CAGGCCAGTTCTAATTTCCAATAGATAAGTCTCTGG...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp AGGGCCACACATCTGTCTGTCTTCACTCTGCTGGTCTaGAGGGAACATGCTTTCAGGATCACTAGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: RATHLSVFTLLV*REHAFRITRAS
Trigger: GCTGGCTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACAGATGTGTGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR GCA 72 bp AGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTaGCTCTATTGTGAGGGGAATGGTGATTTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: SSQGFSLWQCIH*LYCEGNGDFSA
Trigger: GGCACTGAAATCACCATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TTCTTAAGCCCCAGCCTCTTATCCTGTTTGTCAGGATaGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATC +
Preference number: 3 (lower is better)
Translates to: FLSPSLLSCLSG*LKESLLRALQI
Trigger: GATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAAACAGGATAAGAGGCTGGGGCTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TCTGTAGCAGGCCCTCACCCAGGAAGTTTGCTGTTCTaGAATAGGGAGAAGCGTGATCCAAATGGGCCTGTT +
Preference number: 3 (lower is better)
Translates to: SVAGPHPGSLLF*NREKRDPNGPV
Trigger: AACAGGCCCATTTGGATCACGCTTCTCCCTATTCCAGAACAGCAAACTTCCTGGGTGAGGGCCTGCTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp CTTCGTGCTTTCCTGCTTCCTAGGACTCTTGTGGGATaGGAACTCTACTCTTTGCTGAGGGAAGTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: LRAFLLPRTLVG*ELYSLLREVSP
Trigger: AGGGGACACTTCCCTCAGCAAAGAGTAGAGTTCCCATCCCACAAGAGTCCTAGGAAGCAGGAAAGCACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp CACTTCCCCTTTGGTAAAAAGCTAGATGACTGCCTGTaGAGAAGAGGCTGGCTGCTCCTTCGTGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: HFPFGKKLDDCL*RRGWLLLRAFL
Trigger: CAGGAAAGCACGAAGGAGCAGCCAGCCTCTTCTCCACAGGCAGTCATCTAGCTTTTTACCAAAGGGGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCTTCCTAAGAATCACTaGGCCAGAGACTTATCTATT +
Preference number: 3 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGLPKNH*ARDLSI
Trigger: AATAGATAAGTCTCTGGCCAAGTGATTCTTAGGAAG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGGCAATGAAGACGTGTTaGCTTCTGCATGACTGCACT +
Preference number: 3 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKAMKTC*LLHDCT
Trigger: AGTGCAGTCATGCAGAAGCAAACACGTCTTCATTGC...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCCTGCGCTTTCTTGTTTaGACTAGACTGAATAATGGC +
Preference number: 3 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPLRFLV*TRLNNG
Trigger: GCCATTATTCAGTCTAGTCAAAACAAGAAAGCGCAG...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGATTTTCTTTCCAAGGTaGCCAAAAATAGTGGTAGCA +
Preference number: 3 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVIFFPR*PKIVVA
Trigger: TGCTACCACTATTTTTGGCAACCTTGGAAAGAAAAT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTTCTGTGGTCGGTGACTaGGGTGAAGCATCTAACACA +
Preference number: 3 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFSVVGD*GEASNT
Trigger: TGTGTTAGATGCTTCACCCAAGTCACCGACCACAGA...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGAACTCTGGGGCTGCTTaGCCAGGCCCTGGAATACGG +
Preference number: 3 (lower is better)
Translates to: EPVYNPGLPWLETLISILNSGAA*PGPGIR
Trigger: CCGTATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTT...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp TCTTTCTTGGGCTGTGGAAGGTGTCTACAGTTGAGTTaGGCTGGAATGATGAGGAAGCAGAGCCCCGTTCTC +
Preference number: 3 (lower is better)
Translates to: SFLGCGRCLQLS*AGMMRKQSPVL
Trigger: GAGAACGGGGCTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp CAGCAGCTCCAAAGAGGTAGGCATCACCTTGATCTGTaGAGGATCAGGGAACAAGATGGACTTCCAGTCCCT +
Preference number: 3 (lower is better)
Translates to: QQLQRGRHHLDL*RIREQDGLPVP
Trigger: AGGGACTGGAAGTCCATCTTGTTCCCTGATCCTTCACAGATCAAGGTGATGCCTACCTCTTTGGAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTaGAAGGTGTCTACAGTTGAGTTGAGCTGGAATGAT +
Preference number: 3 (lower is better)
Translates to: SLLRALQIFLGL*KVSTVELSWND
Trigger: ATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TTCAGTGCCTTAAAGCTTAGTGACAAGTTAAGACGCTaGCAGTGTCCCAACCCCATGAGTCTCTGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: FSALKLSDKLRR*QCPNPMSLCAR
Trigger: TCTGGCACAGAGACTCATGGGGTTGGGACACTGCCAGCGTCTTAACTTGTCACTAAGCTTTAAGGCACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp CCTAAGTCATTAAGTTGGAAACAGAAGCCTAGAACATaGACCCCACGGCCGGCCAAGATGAGCCATAACACA +
Preference number: 3 (lower is better)
Translates to: PKSLSWKQKPRT*TPRPAKMSHNT
Trigger: TGTGTTATGGCTCATCTTGGCCGGCCGTGGGGTCCATGTTCTAGGCTTCTGTTTCCAACTTAATGACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp TATAGAAACTGGAATGTGATTGGGCTTCTTAGTCACTaGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCT +
Preference number: 3 (lower is better)
Translates to: YRNWNVIGLLSH*PRPELTPFPCS
Trigger: AGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCAGTGACTAAGAAGCCCAATCACATTCCAGTTTCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTCAAAGCCCAGAGCTaGTCTCTACTCAAAATGCCC +
Preference number: 3 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELKAQS*SLLKMP
Trigger: GGGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CCA 72 bp GCTTCAGAGGAGCCTGTCTATAACCCAGGCCTTCCTTaGTTAGAAACACTGATCTCAATTTTGGGTAGCCAC +
Preference number: 3 (lower is better)
Translates to: ASEEPVYNPGLP*LETLISILGSH
Trigger: GTGGCTACCCAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTCCTCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR-3UTR CAA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGCCTCACCCAGGAAGTTaGCTGTTCTGGAATAGGGAG +
Preference number: 3 (lower is better)
Translates to: EPVYNPGLPWLETLISILPHPGS*LFWNRE
Trigger: CTCCCTATTCCAGAACAGCAAACTTCCTGGGTGAGG...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp CTGAAGAGCATTTCTAAAAGCTGTGGGCCATACACCTaGGCCCAGATTTGTCTCCTGTCTGCTTCATTTCAG +
Preference number: 3 (lower is better)
Translates to: LKSISKSCGPYT*AQICLLSASFQ
Trigger: CTGAAATGAAGCAGACAGGAGACAAATCTGGGCTCAGGTGTATGGCCCACAGCTTTTAGAAATGCTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR TCA 72 bp AGGCTAATCTTGAGGGCCTTTGTGTCACCATGGCTATaGAAAGGCCTGGCTACTTATAACTTGATGTTCTTA +
Preference number: 3 (lower is better)
Translates to: RLILRAFVSPWL*KGLATYNLMFL
Trigger: TAAGAACATCAAGTTATAAGTAGCCAGGCCTTTTCATAGCCATGGTGACACAAAGGCCCTCAAGATTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGAGCCGCTCCCAGGCTaGGCGGCCGGCACTACTCTC +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVEPLPG*AAGTTL
Trigger: GAGAGTAGTGCCGGCCGCGCAGCCTGGGAGCGGCTC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGCCACGGCGGGACCCTaGCAGCTCACCTGTGCGTCG +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVATAGP*QLTCAS
Trigger: CGACGCACAGGTGAGCTGCCAGGGTCCCGCCGTGGC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCGGCCCGGCGGCACTCTaGCTCACTGACGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPGPAAL*LTDGAP
Trigger: GGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCC...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTGGCACTCTGCCTCACTaGCGGTGCTCCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASGTLPH*RCSHCP
Trigger: GGGGCAGTGGGAGCACCGTCAGTGAGGCAGAGTGCC...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGGCTCTGGGGTGGGCCTaGCTGGCCTGGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKALGWA*LAWGLA
Trigger: GGCAAGGCCCCAGGCCAGCCAGGCCCACCCCAGAGC...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGAGCGCTGTGAAGGCTaGGCCACGCAGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVERCEG*ATQRSM
Trigger: CATGCTCCTCTGCGTGGCCCAGCCTTCACAGCGCTC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGGCTGGGCTGCTATCTaGGATGGGACCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVGWAAI*DGTHMA
Trigger: AGCCATGTGGGTCCCATCGCAGATAGCAGCCCAGCC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTTGTGGCCAGGGCCACTaGTCAGCTGACCCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASCGQGH*SADPRS
Trigger: GGACCGAGGGTCAGCTGAGCAGTGGCCCTGGCCACA...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGGGGCTTCAGGTGAATaGCTGCGCTGTTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGGASGE*LRCWGE
Trigger: CTCGCCCCAACAGCGCAGCCATTCACCTGAAGCCCC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGATTCTGGACGGGGGTTaGGGCAGGGCGTCTGCAACT +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVILDGG*GRASAT
Trigger: AGTTGCAGACGCCCTGCCCCAACCCCCGTCCAGAAT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCACGGCCGGCCAAGATaGGCCATAACACACGGACTG +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGHGRPR*AITHGL
Trigger: CAGTCCGTGTGTTATGGCTCATCTTGGCCGGCCGTG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGCCAGACTCACCTTCTaGACCTGCTCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVARLTF*TCSTVC
Trigger: GCAGACAGTGGAGCAGGTGCAGAAGGTGAGTCTGGC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGTGTCCTGACTCTTGCTaGTGCTGCTGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMCPDSC*CCWLGC
Trigger: GCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACA...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCCTGACCCTCGGTCCCTaGAGCTCCACCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPLTLGP*SSTTSS
Trigger: GGAGGATGTGGTGGAGCTGCAGGGACCGAGGGTCAG...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCTCCTCACTCACCCGTaGAGAGCTAGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGLLTHP*RARGSS
Trigger: GCTGCTGCCTCTAGCTCTCCACGGGTGAGTGAGGAG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGGAGCAGACTTGGAGTaGTTTTGTGGCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVGADLE*FCGQGH
Trigger: GTGGCCCTGGCCACAAAACCACTCCAAGTCTGCTCC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGGATCTCGCCATTGTCTaGGTTGCAGCCAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMDLAIV*VAARGP
Trigger: TGGGCCCCTGGCTGCAACCCAGACAATGGCGAGATC...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGCCCAGGTACTTGGGCTaGGGGCAGAAAGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMPRYLG*GQKEAM
Trigger: CATTGCCTCTTTCTGCCCTCAGCCCAAGTACCTGGG...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCACCCTACACCAGGGCTaGGCTGTCAGGAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPTLHQG*AVRNRH
Trigger: GTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGT...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCCACATGGGAAGGGCATaGGGGACCAGAGCGCATTGG +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPHMGRA*GTRAHW
Trigger: CCAATGCGCTCTGGTCCCTCATGCCCTTCCCATGTG...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCCCTGGTGCAGACCCTaGACGGGAAGAGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIPWCRP*TGRGSQ
Trigger: CTGAGAGCCTCTTCCCGTGCAGGGTCTGCACCAGGG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCTCTTGTCCTGACTCTTaGTGCTGCTGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGSCPDS*CCCWLG
Trigger: GCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGA...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGAGCTCTAGGCAGGCATaGGAGTCTGACATGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMSSRQA*ESDMPP
Trigger: AGGGGGCATGTCAGACTCGCATGCCTGCCTAGAGCT...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGCACCTGTGCGTCGGATaGAAGGCCTGTCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVHLCVG*KACPAA
Trigger: GGCTGCGGGACAGGCCTTCCATCCGACGCACAGGTG...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCGCAGGCAGCCATCATaGAAAACCCTGGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGRRQPS*KTLVQT
Trigger: GGTCTGCACCAGGGTTTTCCATGATGGCTGCCTGCG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCAAGCCCTAGCCTGCTaGGGAAGGACATGTGATGAG +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVQALAC*GRTCDE
Trigger: CTCATCACATGTCCTTCCCCAGCAGGCTAGGGCTTG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGGACTGCTCCATCCCTaGGATACTCTAGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGGLLHP*DTLGAL
Trigger: AAGGGCCCCTAGAGTATCCCAGGGATGGAGCAGTCC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGCTAGCCCCAGGTACTTaGGCTGAGGGCAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMLAPGT*AEGRKR
Trigger: CCTCTTTCTGCCCTCAGCCCAAGTACCTGGGGCTAG...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCATGCTCTGGGTCACTaGGGCATGTGGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASHALGH*GMWPRG
Trigger: TCCTCTGGGCCACATGCCCCAGTGACCCAGAGCATG...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGAGTGTCCCAACCCCATaGGTCTCTGTGCCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMSVPTP*VSVPEV
Trigger: AACCTCTGGCACAGAGACTCATGGGGTTGGGACACT...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGAAAGAACCAGGCTTCTaGAGGCATGGACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMKEPGF*RHGQLG
Trigger: GCCCAGCTGTCCATGCCTTCAGAAGCCTGGTTCTTT...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGGGAATACGGCAGGCCTaGCCTGGCCCACCAACTCTC +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKGIRQA*PGPPTL
Trigger: GAGAGTTGGTGGGCCAGGTCAGGCCTGCCGTATTCC...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGGGGCCACTGCTCAGCTaGCCCTCGGTCCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTGPLLS*PSVPAA
Trigger: AGCTGCAGGGACCGAGGGTCAGCTGAGCAGTGGCCC...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGTCTTCTGGAGCGCTGTaGAGGCTGGGCCACGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVSSGAL*RLGHAE
Trigger: CTCTGCGTGGCCCAGCCTTCACAGCGCTCCAGAAGA...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTCACCTTCTGCACCTaGTCCACTGTCTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASLTFCT*STVCRL
Trigger: CAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGTGAG...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCCAAAAGGCCTTCCATaGCAGGCCCAAGCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIPKGLP*QAQALA
Trigger: GGCTAGGGCTTGGGCCTGGCATGGAAGGCCTTTTGG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGGAAGAACTCTGGGGCTaGTTTGCCAGGCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMEELWG*FARPWN
Trigger: ATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTTCTTC...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCGGAGAAGAGGCTGGCTaGTCCTTCGTGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPGEEAG*SFVLSC
Trigger: GCAGGAAAGCACGAAGGAGCAGCCAGCCTCTTCTCC...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCAGCAGGAGGGACTCATaGGACAAGAAGTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGSRRDS*DKKSGH
Trigger: GTGGCCTGACTTCTTGTCCCATGAGTCCCTCCTGCT...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGGTCCCGTCTATGATGTaGGGCAGGGGCGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKVPSMM*GRGGPG
Trigger: TCCTGGACCGCCCCTGCCCCACATCATAGACGGGAC...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCAGGCTTCTGAAGGCATaGACAGCTGGGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGRLLKA*TAGQHV
Trigger: CACATGCTGCCCAGCTGTCCATGCCTTCAGAAGCCT...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGAGAATCCCGAGTCCCTaGGAAGGGCTGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKRIPSP*EGLPPP
Trigger: AGGGGGAGGCAGCCCTTCCCAGGGACTCGGGATTCT...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGCAACTCTGGACTTaGGGAGCAACGGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASLQLWT*GATALP
Trigger: GGGAAGTGCCGTTGCTCCCCAAGTCCAGAGTTGCAG...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGGCCAAGGAGCAGACTTaGAGTGGTTTTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMAKEQT*SGFVAR
Trigger: CCTGGCCACAAAACCACTCCAAGTCTGCTCCTTGGC...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCCTGGGGGCTTCAGGTaGATGGCTGCGCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTPGGFR*MAALLG
Trigger: CCCCAACAGCGCAGCCATTCACCTGAAGCCCCCAGG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGCTGGCAGCTCACCTGTaGGTCGGATGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVLAAHL*VGWKAC
Trigger: ACAGGCCTTCCATCCGACGCACAGGTGAGCTGCCAG...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCATGGAAAACCCTGGTaGAGACCCTGCACGGGAAGA +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASHGKPW*RPCTGR
Trigger: TCTTCCCGTGCAGGGTCTGCACCAGGGTTTTCCATG...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCCAAACCGAGCTTCTCTaGTCCATGCTATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPQTELL*SMLSWG
Trigger: CCCCCAGGATAGCATGGAGCAGAGAAGCTCGGTTTG...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGACTCTGGGGCTGCTTTaGCAGGCCCTGGAATACGGC +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKTLGLL*QALEYG
Trigger: GCCGTATTCCAGGGCCTGGCAAAGCAGCCCCAGAGT...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCAGAAAGGCTGGTATCTaGCCTGCTAGCCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPRKAGI*PASPRY
Trigger: GTACCTGGGGCTAGCAGGGCAGATACCAGCCTTTCT...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCTGACCCCCTTTCCATaGTCTGGGTCACTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNILTPFP*SGSLGH
Trigger: ATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCTCAACAGAGAGTTCTaGGGACGCAACTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGLNREF*GRNCCR
Trigger: TCTGCAGCAGTTGCGTCCCCAGAACTCTCTGTTGAG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGCCCCTTTCCATGCTCTaGGTCACTGGGGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVPLSML*VTGACG
Trigger: GCCACATGCCCCAGTGACCCAGAGCATGGAAAGGGG...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGATGACTTTACACCGCTaGAAGGTCTCCGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMMTLHR*KVSVRL
Trigger: TAGCCTCACGGAGACCTTTCAGCGGTGTAAAGTCAT...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGAGCAGGGTCTTGTCCTaGCTCTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKSRVLS*LLLLLL
Trigger: CAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCT...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGATCCTGGGGGACGGCTaGAGAGCATTTCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMILGDG*RAFLKA
Trigger: AGCTTTTAGAAATGCTCTTCAGCCGTCCCCCAGGAT...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGCTTGGATGTAGCCCATaGGGCGCAGGCAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVLGCSP*GAGSHH
Trigger: ATGATGGCTGCCTGCGCCGCATGGGCTACATCCAAG...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGAGACGTGTTTGCTTCTaGATGACTGCACTCCACTCC +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMRRVCF*MTALHS
Trigger: GGAGTGGAGTGCAGTCATGCAGAAGCAAACACGTCT...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTGCAGGAAGGAGCCTCTaGGAACCGTTTGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASAGRSL*EPFAKP
Trigger: TGGTTTTGCAAACGGTTCCCAGAGGCTCCTTCCTGC...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCGCCAGTCCACAAATCTaGACTCCTGCTCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIASPQI*TPALWA
Trigger: TGCCCACAGAGCAGGAGTCCAGATTTGTGGACTGGC...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGACGGCAGGCCTGACCTaGCCCACCAACTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTTAGLT*PTNSPH
Trigger: GTGAGGAGAGTTGGTGGGCCAGGTCAGGCCTGCCGT...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp GGCTCCTGCCAGTGTGTTTGCTCCATTCAGGCCCCCTaGGCCCTAGGCCATGAGCTACCATCTGAAAAATGG +
Preference number: 4 (lower is better)
Translates to: GSCQCVCSIQAP*ALGHELPSEKW
Trigger: CCATTTTTCAGATGGTAGCTCATGGCCTAGGGCCAAGGGGGCCTGAATGGAGCAAACACACTGGCAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp CAGAGTGTGCTCTCGTCAGTCTCTGTGGTCGGTGACTaGGGTGAAGCATCTAACACAGAGGGCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSVLSSVSVVGD*GEASNTEGCGS
Trigger: GGAGCCACAGCCCTCTGTGTTAGATGCTTCACCCAAGTCACCGACCACAGAGACTGACGAGAGCACACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp ATGCGTGAATATCCCCCACTCCAGGAGATCTCGCCATaGTCTGGGTTGCAGCCAGGGGCCCAGACAGATATC +
Preference number: 4 (lower is better)
Translates to: MREYPPLQEISP*SGLQPGAQTDI
Trigger: GATATCTGTCTGGGCCCCTGGCTGCAACCCAGACAATGGCGAGATCTCCTGGAGTGGGGGATATTCACGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGTGTGGGCCATACACCTaGGCCCAGATTTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVCGPYT*AQICLL
Trigger: CAGGAGACAAATCTGGGCTCAGGTGTATGGCCCACA...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCATCACCTTGATCTGTaGAGGATCAGGGAACAAGAT +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVHHLDL*RIREQD
Trigger: ATCTTGTTCCCTGATCCTTCACAGATCAAGGTGATG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCTCACAGGCCAACCCATaGTGGCAGGAGGCTAATCTT +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNISQANP*WQEANL
Trigger: AAGATTAGCCTCCTGCCATCATGGGTTGGCCTGTGA...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGACCTGCTCCACTGTCTaGCGCTTGGACATCAACACC +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVTCSTV*RLDINT
Trigger: GGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGT...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTAACTGGCGGGCCGCCTaGTCTTCTTGCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFNWRAA*SSCSSL
Trigger: GAGTGAGGAGCAAGAAGAGCAGGCGGCCCGCCAGTT...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGGCCCAAGCCCTAGCCTaGTGGGGAAGGACATGTGAT +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGAQALA*WGRTCD
Trigger: ATCACATGTCCTTCCCCAGCAGGCTAGGGCTTGGGC...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGGTGGCAGCCTCTGATTaGCCCAAAAGGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVVAASD*PKRPSM
Trigger: CATGGAAGGCCTTTTGGGGCAATCAGAGGCTGCCAC...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTCGCCATTGTCTGGGTTaGAGCCAGGGGCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFRHCLG*SQGPRQ
Trigger: CTGTCTGGGCCCCTGGCTGCAACCCAGACAATGGCG...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGCTCCAGGCAGATTTCTaGAGGTTTGTCATCATCCAG +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMLQADF*RFVIIQ
Trigger: CTGGATGATGACAAACCTCCAGAAATCTGCCTGGAG...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTCAAAACCAAGAGTGCTaGGCCCGGCGGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFQNQEC*ARRHSA
Trigger: GGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTG...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTGAATGGCTGCGCTGTTaGGGCGAGCAGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFEWLRC*GEQPGC
Trigger: ACATCCTGGCTGCTCGCCCCAACAGCGCAGCCATTC...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGGGCTTGGTGCTCTTGTaGCAGCCTCTGATTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGGLVLL*QPLIAP
Trigger: TGGGGCAATCAGAGGCTGCCACAAGAGCACCAAGCC...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTCAGAAGCCTAGAACATaGACCCCACGGCCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFQKPRT*TPRPAK
Trigger: CTTGGCCGGCCGTGGGGTCCATGTTCTAGGCTTCTG...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGGAAGTTTGCTGTTCTaGAATAGGGAGAAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVGSLLF*NREKRD
Trigger: ATCACGCTTCTCCCTATTCCAGAACAGCAAACTTCC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTGGGCGTCTGCAACTCTaGACTTGGGGAGCAACGGCA +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFGRLQL*TWGATA
Trigger: TGCCGTTGCTCCCCAAGTCCAGAGTTGCAGACGCCC...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGTCTGTTGGGGAAGGCTaGGCTCAGGAGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGSVGEG*AQERKP
Trigger: TGGCTTCCTCTCCTGAGCCCAGCCTTCCCCAACAGA...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGGGGAGCAATCAGGGATaGCTTTACACCGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVGSNQG*LYTAER
Trigger: CCTTTCAGCGGTGTAAAGTCATCCCTGATTGCTCCC...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCAAGAAGGCTCACCTTaGTTTTTGACTACCCTGCTA +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGQEGSP*FLTTLL
Trigger: TAGCAGGGTAGTCAAAAATCAAGGTGAGCCTTCTTG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGGTTTGTCAGGATGGCTaGAAGAGTCCCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGVCQDG*KSPCSG
Trigger: CCCTGAGCAGGGACTCTTTCAGCCATCCTGACAAAC...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGGACTCTTGCTGCTGCTaGTGGCTGGGCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTDSCCC*WLGCYL
Trigger: CAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTC...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCCCCTGTGCTTAATGTaGTTTCATCTCAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVPLCLM*FHLSAK
Trigger: TTTTGCACTGAGATGAAAGCACATTAAGCACAGGGG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGTACTCTAGGGGCCCTTaGTCAAGTGTTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVYSRGP*SSVLLG
Trigger: CCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTA...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGGCATCAAAACTGTTCTaGCTTTTAGGGCCACACATC +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMASKLF*LLGPHI
Trigger: GATGTGTGGCCCTAAAAGGCAGAACAGTTTTGATGC...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCTTAACTGTGGGTTGTaGCTACCCAGTGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGLNCGL*LPSAIE
Trigger: TTCTATAGCACTGGGTAGGCACAACCCACAGTTAAG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCACGTTCCCCTCAGCTTaGTGTCAAGTTACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNITFPSA*CQVTFC
Trigger: GCAGAAGGTAACTTGACAGCAAGCTGAGGGGAACGT...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTCCACGCAGAGGAGCATaGAGCTGTAGAGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFPRRGA*SCRDRE
Trigger: CTCCCTGTCTCTACAGCTGCATGCTCCTCTGCGTGG...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGTCCAGGGCAGCAAACTaGCGGGCCGCCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLESRAAN*RAACSS
Trigger: AGAAGAGCAGGCGGCCCGCCAGTTTGCTGCCCTGGA...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGTCAGGCCACTCTATGTaGCCTCGATGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGSGHSM*PRCSGS
Trigger: GGACCCTGAACATCGAGGCCACATAGAGTGGCCTGA...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGGCGATGGGACCCACATaGCTGATGCTGACACTGCAG +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTAMGPT*LMLTLQ
Trigger: CTGCAGTGTCAGCATCAGCCATGTGGGTCCCATCGC...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTCTTGCTGCTGCTGCTaGCTGGGCTGCTATCTGCGA +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTSCCCC*LGCYLR
Trigger: TCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGA...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCACAGTTGAGTTGAGCTaGAATGATGAGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGTVELS*NDEEAE
Trigger: CTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGT...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGTTCCTAGGACTCTTGTaGGATGGGAACTCTACTCTT +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMFLGLL*DGNSTL
Trigger: AAGAGTAGAGTTCCCATCCCACAAGAGTCCTAGGAA...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGGGGGACCCTAAGACTTaGCCACTTAAGCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVGDPKT*PLKQGQ
Trigger: CTGACCTTGCTTAAGTGGCCAAGTCTTAGGGTCCCC...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGGCCGAGGTTGTGCTTTaGGCTATGAGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVAEVVL*AMSPGY
Trigger: ATACCCAGGACTCATAGCCCAAAGCACAACCTCGGC...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGGGGACCAGAGCGCATTaGATTCCCAAGTGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKGTRAH*IPKCCS
Trigger: TGAGCAACACTTGGGAATCCAATGCGCTCTGGTCCC...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp TGTTGCTCAAGTGTTCTCAGAGTCCCTCTCACAAACTaGGGTTTGGCTGGGGGACAGATCACAGGCCAACCC +
Preference number: 4 (lower is better)
Translates to: CCSSVLRVPLTN*GLAGGQITGQP
Trigger: GGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCGGCAGGTCCCGTCTATaGTGTGGGGCAGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAGRSRL*CGAGAV
Trigger: GACCGCCCCTGCCCCACATCATAGACGGGACCTGCC...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCACTAGTAACAGCAGCTaGCTGCAGAAGGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPTSNSS*LQKGFL
Trigger: CAAAAATCCCTTCTGCAGTCAGCTGCTGTTACTAGT...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTTGTCTACAGTTGAGTTaGGCTGGAATGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASCLQLS*AGMMRK
Trigger: CTTCCTCATCATTCCAGCTCAACTCAACTGTAGACA...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGACATGTGATGAGCAGTaGGGAGAAGCAGCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVTCDEQ*GEAATQ
Trigger: TTGAGTGGCTGCTTCTCCTCACTGCTCATCACATGT...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCAGTGGCACAGGAGATaGTTTGCCAGGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGQWHRR*FARRVG
Trigger: ACCTACTCTCCTGGCAAATCATCTCCTGTGCCACTG...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTAAAATGCCCCGTCTGTaGGATCGAGCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFKMPRL*DRAAQG
Trigger: GCCTTGGGCTGCTCGATCTCACAGACGGGGCATTTT...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGTTCACTCTGCTGGTCTaGAGGGAACATGCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVFTLLV*REHAFR
Trigger: CCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAA...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCTCCGTCACCTCCGCTaGACTGTCTCCTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTLRHLR*TVSLDV
Trigger: TACATCCAAGGAGACAGTGCAGCGGAGGTGACGGAG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTTGGGGACGCAACTGCTaGAGAAGCAGGAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFWGRNC*RSRRDS
Trigger: TGAGTCCCTCCTGCTTCTGCAGCAGTTGCGTCCCCA...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGACAAATCTGGACTCCTaGTCTGTGGGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTTNLDS*SVGSRV
Trigger: GACCCTGCTGCCCACAGAGCAGGAGTCCAGATTTGT...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTTGGCAATGCATTCACTaGCTCTATTGTGAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASWQCIH*LYCEGN
Trigger: ATTCCCCTCACAATAGAGGCAGTGAATGCATTGCCA...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGGACAAGTTAAGACGCTaGCAGTGTCCCAACCCCATG +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGDKLRR*QCPNPM
Trigger: CATGGGGTTGGGACACTGCCAGCGTCTTAACTTGTC...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGTGCTTTGCCAGGCCCTaGAATACGGCAGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLECFARP*NTAGLT
Trigger: GGTCAGGCCTGCCGTATTCCAGGGCCTGGCAAAGCA...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTGGCCTGTTCCTGTTGTaGAAGAACTCTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFGLFLL*KNSGAA
Trigger: AGCAGCCCCAGAGTTCTTCCACAACAGGAACAGGCC...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGTCACAAACTTGGGTTTaGCTGGGGGACAGATCACAG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVSQTWV*LGDRSQ
Trigger: CTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGA...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp TCAAGTGTTCTCAGAGTCCCTCTCACAAACTTGGGTTaGGCTGGGGGACAGATCACAGGCCAACCCATGATG +
Preference number: 4 (lower is better)
Translates to: SSVLRVPLTNLG*AGGQITGQPMM
Trigger: CATCATGGGTTGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGACTCTGAGAACACTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCCACTCCACTCCCTTTTaGATAACTCTTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIHSTPF*ITLGSQ
Trigger: CTGACTACCAAGAGTTATTCAAAAGGGAGTGGAGTG...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGAACTCTACTCTTTGCTaGGGGAAGTGTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTNSTLC*GKCPLG
Trigger: TCCCAGGGGACACTTCCCTCAGCAAAGAGTAGAGTT...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGGCTTCACTGGGTTTCTaGACGTTTTTAACAACTCTA +
Preference number: 4 (lower is better)
Translates to: AGPIRISRSSRQACESDMASLGF*TFLTTL
Trigger: TAGAGTTGTTAAAAACGTTCAGAAACCCAGTGAAGC...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGGTAGGTGTCCTCAAATaGAGAGGAGCACTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKVGVLK*RGALEG
Trigger: ACCTTCAAGTGCTCCTCTTCATTTGAGGACACCTAC...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTAACAGGCACGATGCGTaGATATCCCCCACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFNRHDA*ISPTPG
Trigger: TCCTGGAGTGGGGGATATTCACGCATCGTGCCTGTT...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGGTGTCACCATGGCTATaGAAAGGCCTGGCTACTTAT +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVVSPWL*KGLATY
Trigger: ATAAGTAGCCAGGCCTTTTCATAGCCATGGTGACAC...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCCTCTGGGAACCGTTTaGAAAACCAAGAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTPLGTV*KTKSAG
Trigger: CCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTTCTTCCTCCAGAGTGTaGTCTCGTCAGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFSSSRV*SRQSLW
Trigger: CCACAGAGACTGACGAGAGCACACTCTGGAGGAAGA...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGTGTCTGTCTTCACTCTaGTGGTCTGAAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVCLSSL*WSEGNM
Trigger: CATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCGTTGTGCCTACCCAGTaGTATAGAAACTGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIVVPTQ*YRNWNV
Trigger: CACATTCCAGTTTCTATAGCACTGGGTAGGCACAAC...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCAGCCTGTTTCTGTGTaGGCCATCTCCGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEQPVSV*AISVTS
Trigger: GGAGGTGACGGAGATGGCCCACACAGAAACAGGCTG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTGAAGGCATGGACAGCTaGGCAGCATGTGCACATGTA +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFEGMDS*AACAHV
Trigger: TACATGTGCACATGCTGCCCAGCTGTCCATGCCTTC...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCAGAGACTTATCTATTaGAAATTAGAACTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGQRLIY*KLELAC
Trigger: GCAGGCCAGTTCTAATTTCCAATAGATAAGTCTCTG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGAGAAGGGATTTTTGGTaGAGAAAGCGGGGCCCATTA +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVRRDFW*RKRGPL
Trigger: TAATGGGCCCCGCTTTCTCCACCAAAAATCCCTTCT...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCCTAAGTCATTAAGTTaGAAACAGAAGCCTAGAACA +
Preference number: 4 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVPKSLS*KQKPRT
Trigger: TGTTCTAGGCTTCTGTTTCCAACTTAATGACTTAGG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTCTCAAGAAGCCCCTaGCCGCAGCTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELSRSP*PQLLAF
Trigger: GAAAGCAAGGAGCTGCGGCCAGGGGCTTCTTGAGAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCACAGTCCTGAAGTTCTaGCATCAAAACTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNITVLKF*HQNCSA
Trigger: GGCAGAACAGTTTTGATGCCAGAACTTCAGGACTGT...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTGCTGAATTTCAGTGGTaGTGTTTAACTCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASAEFQW*CLTLFP
Trigger: TGGGAAAAGAGTTAAACATCACCACTGAAATTCAGC...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTAGTGATGGGAGGGCTTaGAAACGAAATGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFSDGRA*KRNGLH
Trigger: GTGAAGCCCATTTCGTTTTCAAGCCCTCCCATCACT...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGTTGTGCTTTGGGCTATaGGTCCTGGGTATAACCTTG +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGLCFGL*VLGITL
Trigger: CAAGGTTATACCCAGGACTCATAGCCCAAAGCACAA...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCATAGAAACTGGAATGTaGTTGGGCTTCTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPIETGM*LGFLVT
Trigger: AGTGACTAAGAAGCCCAATCACATTCCAGTTTCTAT...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGGACCACCGAGGTTCCTaGTTCTGCTTCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEDHRGS*FCFLLL
Trigger: GAGGAGAAGGAAGCAGAAGCAGGAACCTCGGTGGTC...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCGCCGCCTGCTCTTCTTaGTCCTCACTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAAACSS*SSLRAL
Trigger: CAGGGCCCTGAGTGAGGAGCAAGAAGAGCAGGCGGC...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTACTTCAGGTGAATGGCTaGGCTGTTGGGGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLLQVNG*AVGASS
Trigger: GCTGCTCGCCCCAACAGCGCAGCCATTCACCTGAAG...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGATTCTCCAGGCTAGTTaGCTTTTCTGTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVILQAS*LFCHQE
Trigger: TTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAAT...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGTGGAAGGTGTTGCTTCTGCATGACTaGACTCCACTCCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LKESLLRALQIFLGLWKVLLLHD*TPLPFE
Trigger: TTCAAAAGGGAGTGGAGTGCAGTCATGCAGAAGCAA...CACCTTCCACAGCCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTGTGCTTTCATCTCAGTaGAAAACCCCAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFVLSSQ*KTPGLA
Trigger: AGCCAGGCCTGGGGTTTTGCACTGAGATGAAAGCAC...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCTGTCAAGTTACCTTCTaGAGAAAAGCACATGGGAAG +
Preference number: 4 (lower is better)
Translates to: SHPTPGLSCQEQARCVNICQVTF*RKAHGK
Trigger: CTTCCCATGTGCTTTTCTGCAGAAGGTAACTTGACA...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCTGTGGTCGGTGACTTaGGTGAAGCATCTAACACAG +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTLWSVT*VKHLTQ
Trigger: CTGTGTTAGATGCTTCACCCAAGTCACCGACCACAG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGATCTTTCTTGGGCTGTaGAAGGTGTCTACAGTTGAG +
Preference number: 4 (lower is better)
Translates to: ATAPRASPCGNAFTASIVIFLGL*KVSTVE
Trigger: CTCAACTGTAGACACCTTCCACAGCCCAAGAAAGAT...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTACTTGGAGGCCAGGCTTaGTGCTCTTGTGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLLGGQA*CSCGSL
Trigger: GAGGCTGCCACAAGAGCACCAAGCCTGGCCTCCAAG...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTGTGGAGAAGAGGCTaGCTGCTCCTTCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELWRRG*LLLRAF
Trigger: GAAAGCACGAAGGAGCAGCCAGCCTCTTCTCCACAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTAGATGACTGCCTGTaGAGAAGAGGCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELDDCL*RRGWLL
Trigger: GAGCAGCCAGCCTCTTCTCCACAGGCAGTCATCTAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTATGCAAAGGGAGATTCTaGACGGGGGTTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLCKGRF*TGVGAG
Trigger: CCCTGCCCCAACCCCCGTCCAGAATCTCCCTTTGCA...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp GCTAGAGGCAGCAGCTCCAAAGAGGTAGGCATCACCTaGATCTGTGAAGGATCAGGGAACAAGATGGACTTC +
Preference number: 4 (lower is better)
Translates to: ARGSSSKEVGIT*ICEGSGNKMDF
Trigger: GAAGTCCATCTTGTTCCCTGATCCTTCACAGATCAAGGTGATGCCTACCTCTTTGGAGCTGCTGCCTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCACACATCTCATCGTTaGCAACAGGCTCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEHTSHR*QQALWA
Trigger: AGCCCAGAGAGCCTGTTGTCAACGATGAGATGTGTG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTGTGTTTGCTTCTGCATaGCTGCACTCCACTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFVFASA*LHSTPF
Trigger: AAAGGGAGTGGAGTGCAGTCATGCAGAAGCAAACAC...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGAAGGGCCTCGAGCAATaGAGACGTGTTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEKGLEQ*RRVCFC
Trigger: GCAGAAGCAAACACGTCTTCATTGCTCGAGGCCCTT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTATTGCAAAACCAAGAGTaGTGGGCCCGGCGGCACTCT +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLLQNQE*WARRHS
Trigger: AGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAA...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGCCTGACTCTTGCTGCTaGTGCTGGCTGGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILPDSCC*CWLGCY
Trigger: ATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGG...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTGGCCGCAGCTCCTTaGTTTCCTCGAAACATTCAG +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELAAAP*FPRNIQ
Trigger: CTGAATGTTTCGAGGAAAGCAAGGAGCTGCGGCCAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTACCACTGTCTGCCGCTTaGACATCAACACCCCCATGG +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLPLSAA*TSTPPW
Trigger: CCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGG...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGGAGAAAGCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTTTCCTAAGAATCACTTaGCCAGAGACTTATCTATTG +
Preference number: 4 (lower is better)
Translates to: WRKRGPLGSPGALGRHASFLRIT*PETYLL
Trigger: CAATAGATAAGTCTCTGGCCAAGTGATTCTTAGGAA...ACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGCTTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGTGCAGAAGGGATTTTTaGTGGAGAAAGCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLECRRDF*WRKRGP
Trigger: TGGGCCCCGCTTTCTCCACCAAAAATCCCTTCTGCA...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCCTATGGATCAATCCTaGGGGACGGCTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEPMDQS*GTAEEH
Trigger: ATGCTCTTCAGCCGTCCCCCAGGATTGATCCATAGG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGGGGCTTCTTAGTCACTaGCCCAGACCAGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILGLLSH*PRPELT
Trigger: GGTCAGCTCTGGTCTGGGCCAGTGACTAAGAAGCCC...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGAAACTTGGGTTTGGCTaGGGGACAGATCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEKLGFG*GTDHRP
Trigger: TGGCCTGTGATCTGTCCCCCAGCCAAACCCAAGTTT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp ATCTTTCTTGGGCTGTGGAAGGTGTCTACAGTTGAGTaGAGCTGGAATGATGAGGAAGCAGAGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: IFLGLWKVSTVE*SWNDEEAEPRS
Trigger: AGAACGGGGCTCTGCTTCCTCATCATTCCAGCTCAACTCAACTGTAGACACCTTCCACAGCCCAAGAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGATGAAGAGGAGCACTTaGAGGTTAGATCAGTACCTA +
Preference number: 4 (lower is better)
Translates to: LSGWLKESLLRALQIFLGMKRST*RLDQYL
Trigger: TAGGTACTGATCTAACCTTCAAGTGCTCCTCTTCAT...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGCCAGGCAGCTTCTGCTaGCCTTCCCTCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILPGSFC*PSLLAF
Trigger: AAAAGCCAAGAGGGAAGGTCAGCAGAAGCTGCCTGG...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGTCCTGCCAGTGTGTTTaGTCCATTCAGGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILSCQCV*SIQAPL
Trigger: CAAGGGGGCCTGAATGGAGCAAACACACTGGCAGGA...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTTGTCTCTACTCAAAATaGCCCGTCTGTGAGATCGAG +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFCLYSK*PVCEIE
Trigger: CTCGATCTCACAGACGGGGCATTTTGAGTAGAGACA...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGGAGGCAGGAGAAAAATaGTATTCAGCTCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTEAGEK*YSALKA
Trigger: GGCTTTGAGAGCTGAATAGCATTTTTCTCCTGCCTC...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGTCCTTCGTGCTTTCCTaGTTCCTAGGACTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLESFVLS*FLGLLW
Trigger: CCACAAGAGTCCTAGGAAGCAGGAAAGCACGAAGGA...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTTGGGGATTAGAACACTaGAAAGGGAGATTCTGGACG +
Preference number: 4 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFWGLEH*KGRFWT
Trigger: CGTCCAGAATCTCCCTTTGCAGTGTTCTAATCCCCA...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGCAGGAACAGGCACGATaGGTGAATATCCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILQEQAR*VNIPHS
Trigger: GGAGTGGGGGATATTCACGCATCGTGCCTGTTCCTG...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGGCACTACTCTCTTCCTaGACCACCGAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILALLSS*TTEVPA
Trigger: AGCAGGAACCTCGGTGGTCCAGGAAGAGAGTAGTGC...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCGGCATCAGCTTCTTCTaGAGCGCTGTGAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAGISFF*SAVKAG
Trigger: CCCAGCCTTCACAGCGCTCCAGAAGAAGCTGATGCC...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp GATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTaGCTTCTGCATGACTGCACTCCACTCCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: DLAQGPRAMKTC*LLHDCTPLPFE
Trigger: TTCAAAAGGGAGTGGAGTGCAGTCATGCAGAAGCAAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
3UTR CAA 72 bp CAGTTCTTAGGCCCAGGAGTCCTGCGCTTTCTTGTTTaGACTAGACTGAATAATGGCCCCTCCTATGGATCA +
Preference number: 4 (lower is better)
Translates to: QFLGPGVLRFLV*TRLNNGPSYGS
Trigger: TGATCCATAGGAGGGGCCATTATTCAGTCTAGTCAAAACAAGAAAGCGCAGGACTCCTGGGCCTAAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGATTTCAGAGTCACAGTaGTGGGAGGGCTTGAAAACG +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEISESQ*WEGLKT
Trigger: CGTTTTCAAGCCCTCCCATCACTGTGACTCTGAAAT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTCACCCAGGAAGTTTaGTGTTCTGGAATAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELTQEV*CSGIGR
Trigger: TCTCCCTATTCCAGAACAGCAAACTTCCTGGGTGAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCCATCATGGAAAACCCTaGTGCAGACCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAHHGKP*CRPCTG
Trigger: TCCCGTGCAGGGTCTGCACCAGGGTTTTCCATGATG...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCTGTCTTCACTCTGCTaGTCTGAAGGGAACATGCTT +
Preference number: 4 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLELSSLC*SEGNML
Trigger: AAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGGCTGAAAGGTCTCCGTaGGGCTATACATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILAERSP*GYTFPP
Trigger: AGGAGGAAATGTATAGCCTCACGGAGACCTTTCAGC...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCCAGGGCTTCTCCTTGTaGCAATGCATTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAQGFSL*QCIHCL
Trigger: GAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTG...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGTGCTTCCAGCTAAGGTaGTTCCTACAGGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILCFQLR*FLQEET
Trigger: AGTCTCCTCCTGTAGGAACCACCTTAGCTGGAAGCA...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTAGATCAGGGAACAAGATaGACTTCCAGTCCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLDQGTR*TSSPCD
Trigger: GTCACAGGGACTGGAAGTCCATCTTGTTCCCTGATC...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCACCGCAGAGGGGCTCTaGGGATTAGAACACTGCAAA +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNATAEGL*GLEHCK
Trigger: TTTGCAGTGTTCTAATCCCCAGAGCCCCTCTGCGGT...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCGGTCACTGGGGCATGTaGCCCAGAGGAAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNAGHWGM*PRGKSF
Trigger: AAAGCTTTTTCCTCTGGGCCACATGCCCCAGTGACC...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTAGTAACAGCAGCTGACTaGAGAAGGGATTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLVTAAD*RRDFWW
Trigger: CCACCAAAAATCCCTTCTGCAGTCAGCTGCTGTTAC...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGAGGACTCTTGTGGGATaGGAACTCTACTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILRTLVG*ELYSLL
Trigger: CAGCAAAGAGTAGAGTTCCCATCCCACAAGAGTCCT...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGATGCTAGGTGAAAAATaGTTAGGGCAAGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILMLGEK*LGQVGF
Trigger: GAAGCCCACTTGCCCTAAGCATTTTTCACCTAGCAT...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR GCA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTATGGATTCCCAAGTGTTaGTCAAGTGTTCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLWIPKC*SSVLRV
Trigger: GACTCTGAGAACACTTGAGCAACACTTGGGAATCCA...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR TCA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGAAGAGGAATGCTAGGTaGAAAATGCTTAGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: EPVYNPGLPWLETLISILKRNAR*KMLRAS
Trigger: ACTTGCCCTAAGCATTTTTCACCTAGCATTCCTCTT...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CCA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCAACCCAGGCCTTCCTTaGTTAGAAACACTGATCTCA +
Preference number: 4 (lower is better)
Translates to: RKMLFSSQSPELVSTQNANPGLP*LETLIS
Trigger: TGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTT...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp CTCCTCAGGCTCCACGCCGCGCCCATCTCGGAGCCGCTCCCAGGCTaGGCGGCCGGCACTACTCTCTTCCTGGACCACCGAGGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LLRLHAAPISEPLPG*AAGTTLFLDHRGSC
Trigger: GCAGGAACCTCGGTGGTCCAGGAAGAGAGTAGTGCCGGCCGCGCAGCCTGGGAGCGGCTCCGAGATGGGCGCGGCGTGGAGCCTGAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS CCA 90 bp CTGTACCTCCTGGACGGAGCCCTCTACAGTGCCACGGCGGGACCCTaGCAGCTCACCTGTGCGTCGGATGGAAGGCCTGTCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LYLLDGALYSATAGP*QLTCASDGRPVPQP
Trigger: GGGCTGCGGGACAGGCCTTCCATCCGACGCACAGGTGAGCTGCCAGGGTCCCGCCGTGGCACTGTAGAGGGCTCCGTCCAGGAGGTACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS TCA 90 bp GTTTGCAAAACCAAGAGTGCTGGGCCCGGCGGCACTCTGCCTCACTaGCGGTGCTCCCACTGCCCCGAGCCAGGAAGGCGGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VCKTKSAGPGGTLPH*RCSHCPEPGRRLGL
Trigger: GAGCCCGAGCCGCCTTCCTGGCTCGGGGCAGTGGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 90 bp TGGGAACCGTTTGCAAAACCAAGAGTGCTGGGCCCGGCGGCACTCTaGCTCACTGACGGTGCTCCCACTGCCCCGAGCCAGGAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: WEPFAKPRVLGPAAL*LTDGAPTAPSQEGG
Trigger: GCCGCCTTCCTGGCTCGGGGCAGTGGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 90 bp CTGCTTCCTTCTCCTCCTGTACCTCCTGGACGGAGCCCTCTACAGTaGCACGGCGGGACCCTGGCAGCTCACCTGTGCGTCGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: LLPSPPVPPGRSPLQ*HGGTLAAHLCVGWK
Trigger: CTTCCATCCGACGCACAGGTGAGCTGCCAGGGTCCCGCCGTGGCACTGTAGAGGGCTCCGTCCAGGAGGTACAGGAGGAGAAGGAAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS CCA 90 bp CTGCAGGAAGGAGCCTCTGGGAACCGTTTGCAAAACCAAGAGTGCTaGGCCCGGCGGCACTCTGCCTCACTGACGGTGCTCCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: LQEGASGNRLQNQEC*ARRHSASLTVLPLP
Trigger: GGGCAGTGGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGCTCCTTCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 90 bp GCAGCTCCAGCCTGTTTCTGTGTGGGCCATCTCCGTCACCTCCGCTaGACTGTCTCCTTGGATGTAGCCCATGCGGCGCAGGCAGCCATC +
Preference number: 5 (lower is better)
Translates to: AAPACFCVGHLRHLR*TVSLDVAHAAQAAI
Trigger: GATGGCTGCCTGCGCCGCATGGGCTACATCCAAGGAGACAGTGCAGCGGAGGTGACGGAGATGGCCCACACAGAAACAGGCTGGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CCA 90 bp GGCCACTCTATGTGGCCTCGATGTTCAGGGTCCAGGGCAGCAAACTaGCGGGCCGCCTGCTCTTCTTGCTCCTCACTCAGGGCCCTGTCA +
Preference number: 5 (lower is better)
Translates to: GHSMWPRCSGSRAAN*RAACSSCSSLRALS
Trigger: TGACAGGGCCCTGAGTGAGGAGCAAGAAGAGCAGGCGGCCCGCCAGTTTGCTGCCCTGGACCCTGAACATCGAGGCCACATAGAGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCGCTGCACTGTCTCCTaGGATGTAGCCCATGCGGCG +
Preference number: 5 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVRCTVS*DVAHAA
Trigger: CGCCGCATGGGCTACATCCAAGGAGACAGTGCAGCG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp CCATCTCCGTCACCTCCGCTGCACTGTCTCCTTGGATGTAGCCCATaGGGCGCAGGCAGCCATCATGGAAAACCCTGGTGCAGACCCTGC +
Preference number: 5 (lower is better)
Translates to: PSPSPPLHCLLGCSP*GAGSHHGKPWCRPC
Trigger: GCAGGGTCTGCACCAGGGTTTTCCATGATGGCTGCCTGCGCCGCATGGGCTACATCCAAGGAGACAGTGCAGCGGAGGTGACGGAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp ACACTGCAGGAAGGAGCCTCTGGGAACCGTTTGCAAAACCAAGAGTaGTGGGCCCGGCGGCACTCTGCCTCACTGACGGTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: TLQEGASGNRLQNQE*WARRHSASLTVLPL
Trigger: CAGTGGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGCTCCTTCCTGCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 90 bp TGGACTCCTGCTCTGTGGGCAGCAGGGTCTTGTCCTGACTCTTGCTaGTGCTGCTGGCTGGGCTGCTATCTGCGATGGGACCCACATGGC +
Preference number: 5 (lower is better)
Translates to: WTPALWAAGSCPDSC*CCWLGCYLRWDPHG
Trigger: GCCATGTGGGTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCTGCCCACAGAGCAGGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGCTTGGAGGCCAGGCTaGGTGCTCTTGTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGAWRPG*VLLWQP
Trigger: AGGCTGCCACAAGAGCACCAAGCCTGGCCTCCAAGC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp GCGGCCGGCACTACTCTCTTCCTGGACCACCGAGGTTCCTGCTTCTaGTTCCTTCTCCTCCTGTACCTCCTGGACGGAGCCCTCTACAGT +
Preference number: 5 (lower is better)
Translates to: AAGTTLFLDHRGSCF*FLLLLYLLDGALYS
Trigger: ACTGTAGAGGGCTCCGTCCAGGAGGTACAGGAGGAGAAGGAAGCAGAAGCAGGAACCTCGGTGGTCCAGGAAGAGAGTAGTGCCGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp CCATCTCCGTCACCTCCGCTGCACTGTCTCCTTGGATGTAGCCCATaGGGCGCAGGCAGCCATCATGGAAAACCCTGGTGCAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: PSPSPPLHCLLGCSP*GAGSHHGKPWCRPF
Trigger: GAAGGGTCTGCACCAGGGTTTTCCATGATGGCTGCCTGCGCCGCATGGGCTACATCCAAGGAGACAGTGCAGCGGAGGTGACGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476115.2
CDS CCA 90 bp AGAAGCAGGAGGGACTCATGGGACAAGAAGTCAGGCCACTCTATGTaGCCTCGATGTTCAGGGTCCAGGGCAGCAAACTGGCGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RSRRDSWDKKSGHSM*PRCSGSRAANWRAA
Trigger: GGCGGCCCGCCAGTTTGCTGCCCTGGACCCTGAACATCGAGGCCACATAGAGTGGCCTGACTTCTTGTCCCATGAGTCCCTCCTGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp TCCCACCCTACACCAGGGCTGAGCTGTCAGGAACAGGCACGATGCGTGAATATCGATTCTGGACGGGGGTaGGGGCAGGGCGTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: SHPTPGLSCQEQARCVNIDSGRG*GQGVCN
Trigger: GTTGCAGACGCCCTGCCCCAACCCCCGTCCAGAATC...GATATTCACGCATCGTGCCTGTTCCTGACAGCTCAGCCCTGGTGTAGGGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp CCATGCGGCGCAGGCAGCCATCATGGAAAACCCTGGTGCAGACCCTaGACGGGAAGAGGCTCTCAGCTGTCCAGACCTCACAAACATCAC +
Preference number: 5 (lower is better)
Translates to: PCGAGSHHGKPWCRP*TGRGSQLSRPHKHH
Trigger: GTGATGTTTGTGAGGTCTGGACAGCTGAGAGCCTCTTCCCGTGCAGGGTCTGCACCAGGGTTTTCCATGATGGCTGCCTGCGCCGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp GGTCTTGTCCTGACTCTTGCTGCTGCTGCTGGCTGGGCTGCTATCTaGGATGGGACCCACATGGCTGATGCTGACACTGCAGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLVLTLAAAAGWAAI*DGTHMADADTAGRS
Trigger: GCTCCTTCCTGCAGTGTCAGCATCAGCCATGTGGGTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 90 bp ATCTGGACTCCTGCTCTGTGGGCAGCAGGGTCTTGTCCTGACTCTTaGTGCTGCTGCTGGCTGGGCTGCTATCTGCGATGGGACCCACAT +
Preference number: 5 (lower is better)
Translates to: IWTPALWAAGSCPDS*CCCWLGCYLRWDPH
Trigger: ATGTGGGTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCTGCCCACAGAGCAGGAGTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CCA 90 bp TGTGGGCAGCAGGGTCTTGTCCTGACTCTTGCTGCTGCTGCTGGCTaGGCTGCTATCTGCGATGGGACCCACATGGCTGATGCTGACACT +
Preference number: 5 (lower is better)
Translates to: CGQQGLVLTLAAAAG*AAICDGTHMADADT
Trigger: AGTGTCAGCATCAGCCATGTGGGTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCTGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATG +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGSTVCR*DINTPM
Trigger: CATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGA...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCTCCCGCAGCCCATCCTaGAAAGCAGACACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGSRSPS*KADTAR
Trigger: TCTGGCTGTGTCTGCTTTCAAGGATGGGCTGCGGGA...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCTCCTGCCAGTGTGTTaGCTCCATTCAGGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGLLPVC*LHSGPL
Trigger: AAGGGGGCCTGAATGGAGCAAACACACTGGCAGGAG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGATGGGCCTGTTCCTGTaGTGGAAGAACTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVMGLFL*WKNSGA
Trigger: AGCCCCAGAGTTCTTCCACAACAGGAACAGGCCCAT...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GCGGGGCCCATTAGGATCTCCAGGAGCTCTAGGCAGGCATGCGAGTCTGACATGTGCTTGAAGTTTCTCTaGGCTCTGGGGTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AGPIRISRSSRQACESDMCLKFL*ALGWAW
Trigger: CCAGGCCCACCCCAGAGCCAAGAGAAACTTCAAGCA...CATGTCAGACTCGCATGCCTGCCTAGAGCTCCTGGAGATCCTAATGGGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGTCCCTCTCACAAACTaGGGTTTGGCTGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGVPLTN*GLAGGQ
Trigger: CTGTCCCCCAGCCAAACCCAAGTTTGTGAGAGGGAC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS TCA 90 bp TCCACAAATCTGGACTCCTGCTCTGTGGGCAGCAGGGTCTTGTCCTaGCTCTTGCTGCTGCTGCTGGCTGGGCTGCTATCTGCGATGGGA +
Preference number: 5 (lower is better)
Translates to: STNLDSCSVGSRVLS*LLLLLLAGLLSAMG
Trigger: TCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCTGCCCACAGAGCAGGAGTCCAGATTTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CCA 90 bp CTGCTCCATGCTATCCTGGGGGCTTCAGGTGAATGGCTGCGCTGTTaGGGCGAGCAGCCAGGATGTAGAGGACATTCTCTTGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LLHAILGASGEWLRC*GEQPGCRGHSLAGR
Trigger: CCTTCCTGCAAGAGAATGTCCTCTACATCCTGGCTGCTCGCCCCAACAGCGCAGCCATTCACCTGAAGCCCCCAGGATAGCATGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGGTAGAGGACATTCTCTaGCAGGAAGGTAGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVVEDIL*QEGRPV
Trigger: GACTGGCCTACCTTCCTGCAAGAGAATGTCCTCTAC...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCCCTGGCCGCAGCTCCTaGCTTTCCTCGAAACATTCA +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGPGRSS*LSSKHS
Trigger: TGAATGTTTCGAGGAAAGCAAGGAGCTGCGGCCAGG...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp GAGCTTCTCTGCTCCATGCTATCCTGGGGGCTTCAGGTGAATGGCTaGGCTGTTGGGGCGAGCAGCCAGGATGTAGAGGACATTCTCTTG +
Preference number: 5 (lower is better)
Translates to: ELLCSMLSWGLQVNG*AVGASSQDVEDILL
Trigger: CAAGAGAATGTCCTCTACATCCTGGCTGCTCGCCCCAACAGCGCAGCCATTCACCTGAAGCCCCCAGGATAGCATGGAGCAGAGAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGCAGATTTCTGGAGGTTaGTCATCATCCAGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVQISGG*SSSSFR
Trigger: CCGGAAGCTGGATGATGACAAACCTCCAGAAATCTG...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGAGGTAGGCATCACCTaGATCTGTGAAGGATCAGGG +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGEVGIT*ICEGSG
Trigger: CCCTGATCCTTCACAGATCAAGGTGATGCCTACCTC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGAACTCTGGGGCTGCTTaGCCAGGCCCTGGAATACGG +
Preference number: 5 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKNSGAA*PGPGIR
Trigger: CCGTATTCCAGGGCCTGGCAAAGCAGCCCCAGAGTT...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGGCCCAGACCAGAGCTGACCCCCTTTCCATGCTCTGGGTCACTGGGGCATGTGTGCTTCCTAGGACTCTaGTGGGATGGGAACTCTACT +
Preference number: 5 (lower is better)
Translates to: WPRPELTPFPCSGSLGHVCFLGL*WDGNST
Trigger: AGTAGAGTTCCCATCCCACAAGAGTCCTAGGAAGCA...CACATGCCCCAGTGACCCAGAGCATGGAAAGGGGGTCAGCTCTGGTCTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS CCA 90 bp CATCTCATCGTTGACAACAGGCTCTCTGGGCTCCAGGCAGATTTCTaGAGGTTTGTCATCATCCAGCTTCCGGGTGGGGCGGATGAACGC +
Preference number: 5 (lower is better)
Translates to: HLIVDNRLSGLQADF*RFVIIQLPGGADER
Trigger: GCGTTCATCCGCCCCACCCGGAAGCTGGATGATGACAAACCTCCAGAAATCTGCCTGGAGCCCAGAGAGCCTGTTGTCAACGATGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGCTGCAGAAGGGATTTTaGGTGGAGAAAGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: ATAPRASPCGNAFTASIVLQKGF*VEKAGP
Trigger: GGGCCCCGCTTTCTCCACCAAAAATCCCTTCTGCAG...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGAGACTTGGAGTGGTTTaGTGGCCAGGGCCACTGCTC +
Preference number: 5 (lower is better)
Translates to: ATAPRASPCGNAFTASIVRLGVV*WPGPLL
Trigger: GAGCAGTGGCCCTGGCCACAAAACCACTCCAAGTCT...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGGTCCTGGGTATAACCTaGGGGCTCACTCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LSGWLKESLLRALQIFLGVLGIT*GLTPPR
Trigger: CCTTGGGGGAGTGAGCCCCAAGGTTATACCCAGGAC...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 90 bp AGGAAAGGAGGGAGAGGATGTCACTGTCCTCAAACCGAGCTTCTCTaGTCCATGCTATCCTGGGGGCTTCAGGTGAATGGCTGCGCTGTT +
Preference number: 5 (lower is better)
Translates to: RKGGRGCHCPQTELL*SMLSWGLQVNGCAV
Trigger: AACAGCGCAGCCATTCACCTGAAGCCCCCAGGATAGCATGGAGCAGAGAAGCTCGGTTTGAGGACAGTGACATCCTCTCCCTCCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS-3UTR CAA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTTCCATTCAGGCCCCCTaGGCCCTAGGCCATGAGCTA +
Preference number: 5 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFSIQAP*ALGHEL
Trigger: TAGCTCATGGCCTAGGGCCAAGGGGGCCTGAATGGA...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCTGGGATACTCTAGGGGCCCTTGCTCAAGTGTTCTGTTGGGGAAGGCTGGGCGCAATGAAGACGTGTTaGCTTCTGCATGACTGCACT +
Preference number: 5 (lower is better)
Translates to: PWDTLGALAQVFCWGRLGAMKTC*LLHDCT
Trigger: AGTGCAGTCATGCAGAAGCAAACACGTCTTCATTGC...GCCCAGCCTTCCCCAACAGAACACTTGAGCAAGGGCCCCTAGAGTATCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CTACTCTTTGCTGAGGGAAGTGTCCCCTGGGATCTCTGTAGCAGGCCCTCACCCCACCTGAGCCCAGATTaGTCTCCTGTCTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: LLFAEGSVPWDLCSRPSPHLSPD*SPVCFI
Trigger: AATGAAGCAGACAGGAGACAAATCTGGGCTCAGGTG...GGGTGAGGGCCTGCTACAGAGATCCCAGGGGACACTTCCCTCAGCAAAGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGTGCTCAAGTGTTCTGTaGGGGAAGGCTGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LSGWLKESLLRALQIFLGCSSVL*GKAGLR
Trigger: CCTGAGCCCAGCCTTCCCCAACAGAACACTTGAGCA...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTGGCCGAGGTTGTGCTTaGGGCTATGAGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFGRGCA*GYESWV
Trigger: TACCCAGGACTCATAGCCCAAAGCACAACCTCGGCC...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTCAGGAGATCTCGCCATaGTCTGGGTTGCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFQEISP*SGLQPG
Trigger: CCCTGGCTGCAACCCAGACAATGGCGAGATCTCCTG...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGGGCAGGAGGCTAATCTaGAGGGCCTTTGTGTCACCA +
Preference number: 5 (lower is better)
Translates to: LSGWLKESLLRALQIFLGGRRLI*RAFVSP
Trigger: TGGTGACACAAAGGCCCTCAAGATTAGCCTCCTGCC...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGGACGTTCCCCTCAGCTaGCTGTCAAGTTACCTTCTG +
Preference number: 5 (lower is better)
Translates to: ATAPRASPCGNAFTASIVDVPLS*LSSYLL
Trigger: CAGAAGGTAACTTGACAGCAAGCTGAGGGGAACGTC...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTCCCAGGGCTTCTCCTaGTGGCAATGCATTCACTGC +
Preference number: 5 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTSQGFS*WQCIHC
Trigger: GCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGA...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGCTCAAAGCCCAGAGCTaGTCTCTACTCAAAATGCCC +
Preference number: 5 (lower is better)
Translates to: ATAPRASPCGNAFTASIVLKAQS*SLLKMP
Trigger: GGGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAG...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGAGCCAAGGAGCAGACTaGGAGTGGTTTTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTSQGAD*EWFCGQ
Trigger: CTGGCCACAAAACCACTCCAAGTCTGCTCCTTGGCT...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTACCCCCGCTTGGCTGCTaGGTGGCGGTAACGCAGAAA +
Preference number: 5 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLPPLGC*VAVTQK
Trigger: TTTCTGCGTTACCGCCACCAAGCAGCCAAGCGGGGG...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTGCCTCTGGGAACCGTTaGCAAAACCAAGAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFASGNR*QNQECW
Trigger: CCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGC...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCCTCACCCAGGAAGTTaGCTGTTCTGGAATAGGGAG +
Preference number: 5 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTPHPGS*LFWNRE
Trigger: CTCCCTATTCCAGAACAGCAAACTTCCTGGGTGAGG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCTCACAAACTTGGGTTaGGCTGGGGGACAGATCACA +
Preference number: 5 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTLTNLG*AGGQIT
Trigger: TGTGATCTGTCCCCCAGCCAAACCCAAGTTTGTGAG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GCCACAGCTCCCAGGGCTTCTCCTTGTGGCAATGCATTCACTGCCTCTATTGTGCTTCACAAAGGGACTTaGGTCCTTTCTCAACCAAAA +
Preference number: 5 (lower is better)
Translates to: ATAPRASPCGNAFTASIVLHKGT*VLSQPK
Trigger: TTTTGGTTGAGAAAGGACCAAAGTCCCTTTGTGAAG...CACAATAGAGGCAGTGAATGCATTGCCACAAGGAGAAGCCCTGGGAGCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCCAAGAAGGCTCACCTaGATTTTTGACTACCCTGCT +
Preference number: 5 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTPRRLT*IFDYPA
Trigger: AGCAGGGTAGTCAAAAATCAAGGTGAGCCTTCTTGG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TCCTCGAAACATTCAGCACCGAGCGGTGTGTGTTCTTCTGTACGCACCCGATTTAGTTCTCAGTCCTGCTaGAAGTTTCTCTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSKHSAPSGVCSSVRTRFSSQSC*KFLLAL
Trigger: CAGAGCCAAGAGAAACTTCAAGCAGGACTGAGAACT...AAATCGGGTGCGTACAGAAGAACACACACCGCTCGGTGCTGAATGTTTCGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp AGAAAAATGCTATTCAGCTCTCAAAGCCCAGAGCTTGTCTCTACTCAAAATGCCTCTGCAACTCTGGACTaGGGGAGCAACGGCACTTCC +
Preference number: 5 (lower is better)
Translates to: RKMLFSSQSPELVSTQNASATLD*GSNGTS
Trigger: GGAAGTGCCGTTGCTCCCCAAGTCCAGAGTTGCAGA...GGCATTTTGAGTAGAGACAAGCTCTGGGCTTTGAGAGCTGAATAGCATTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp GAGCCTGTCTATAACCCAGGCCTTCCTTGGTTAGAAACACTGATCTCAATTTTGAGGGACCAGAGCGCATaGGATTCCCAAGTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: EPVYNPGLPWLETLISILRDQSA*DSQVLL
Trigger: GAGCAACACTTGGGAATCCAATGCGCTCTGGTCCCT...CAAAATTGAGATCAGTGTTTCTAACCAAGGAAGGCCTGGGTTATAGACAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTATCACACATCTCATCGTaGACAACAGGCTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLSHISS*TTGSLG
Trigger: GCCCAGAGAGCCTGTTGTCAACGATGAGATGTGTGA...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CCCAGAGCTTGTCTCTACTCAAAATGCCCCGTCTGTGAGATCGAGCAGCCCAAGATTTTCTTTCCAAGGTaGCCAAAAATAGTGGTAGCA +
Preference number: 5 (lower is better)
Translates to: PRACLYSKCPVCEIEQPKIFFPR*PKIVVA
Trigger: TGCTACCACTATTTTTGGCAACCTTGGAAAGAAAAT...CTTGGGCTGCTCGATCTCACAGACGGGGCATTTTGAGTAGAGACAAGCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TTGTCAGGATGGCTGAAAGAGTCCCTGCTCAGGGCTCTGCAGATCTTTCTTGGGCTGGCTACTTATAACTaGATGTTCTTAACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LSGWLKESLLRALQIFLGLATYN*MFLTVG
Trigger: ACCCACAGTTAAGAACATCAAGTTATAAGTAGCCAG...CCCAAGAAAGATCTGCAGAGCCCTGAGCAGGGACTCTTTCAGCCATCCTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTGTTCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGCTTCCTAAGAATCACTaGGCCAGAGACTTATCTATT +
Preference number: 5 (lower is better)
Translates to: CVLLYAPDLAQGPRAMKTLPKNH*ARDLSI
Trigger: AATAGATAAGTCTCTGGCCAAGTGATTCTTAGGAAG...CGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTATCTGTGGTCGGTGACTaGGGTGAAGCATCTAACACA +
Preference number: 5 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLSVVGD*GEASNT
Trigger: TGTGTTAGATGCTTCACCCAAGTCACCGACCACAGA...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TCTTCTGTACGCACCCGATTTAGCACAAGGGCCTCGAGCAATGAAGACGTGTTTCTGCGCTTTCTTGTTTaGACTAGACTGAATAATGGC +
Preference number: 5 (lower is better)
Translates to: SSVRTRFSTRASSNEDVFLRFLV*TRLNNG
Trigger: GCCATTATTCAGTCTAGTCAAAACAAGAAAGCGCAG...AAACACGTCTTCATTGCTCGAGGCCCTTGTGCTAAATCGGGTGCGTACAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGCCAGAGACTTATCTATaGGAAATTAGAACTGGCCTG +
Preference number: 5 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLEPETYL*EIRTGL
Trigger: CAGGCCAGTTCTAATTTCCAATAGATAAGTCTCTGG...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGAATGAAGAGGAGCACTaGAAGGTTAGATCAGTACCT +
Preference number: 5 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLENEEEH*KVRSVP
Trigger: AGGTACTGATCTAACCTTCAAGTGCTCCTCTTCATT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp CAGTCAGGATTCTCCAGGCTAGTTGCCTTTTCTGTCACCAGGAATTGGAATTTAGTTCTTAACTGTGGGTaGTGCCTACCCAGTGCTATA +
Preference number: 5 (lower is better)
Translates to: QSGFSRLVAFSVTRNWNLVLNCG*CLPSAI
Trigger: TATAGCACTGGGTAGGCACAACCCACAGTTAAGAAC...TAAATTCCAATTCCTGGTGACAGAAAAGGCAACTAGCCTGGAGAATCCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS-3UTR CAA 90 bp TGTCTGTCTTCACTCTGCTGGTCTGAAGGGAACATGCTTTCAGGATCACTAGAGACACTGATCTCAATTTaGGGTAGCCACAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: CLSSLCWSEGNMLSGSLETLISI*GSHKEK
Trigger: CTTTTCTTTGTGGCTACCCAAAATTGAGATCAGTGT...CTCTAGTGATCCTGAAAGCATGTTCCCTTCAGACCAGCAGAGTGAAGACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 72 bp CTCCACGCCGCGCCCATCTCGGAGCCGCTCCCAGGCTaGGCGGCCGGCACTACTCTCTTCCTGGACCACCGA +
Preference number: 6 (lower is better)
Translates to: LHAAPISEPLPG*AAGTTLFLDHR
Trigger: TCGGTGGTCCAGGAAGAGAGTAGTGCCGGCCGCGCAGCCTGGGAGCGGCTCCGAGATGGGCGCGGCGTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS TCA 72 bp ACCAAGAGTGCTGGGCCCGGCGGCACTCTGCCTCACTaGCGGTGCTCCCACTGCCCCGAGCCAGGAAGGCGG +
Preference number: 6 (lower is better)
Translates to: TKSAGPGGTLPH*RCSHCPEPGRR
Trigger: CCGCCTTCCTGGCTCGGGGCAGTGGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 72 bp CTACAGTGCCACGGCGGGACCCTGGCAGCTCACCTGTaGGTCGGATGGAAGGCCTGTCCCGCAGCCCATCCT +
Preference number: 6 (lower is better)
Translates to: LQCHGGTLAAHL*VGWKACPAAHP
Trigger: AGGATGGGCTGCGGGACAGGCCTTCCATCCGACGCACAGGTGAGCTGCCAGGGTCCCGCCGTGGCACTGTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS CCA 72 bp CTGGACGGAGCCCTCTACAGTGCCACGGCGGGACCCTaGCAGCTCACCTGTGCGTCGGATGGAAGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: LDGALYSATAGP*QLTCASDGRPV
Trigger: GACAGGCCTTCCATCCGACGCACAGGTGAGCTGCCAGGGTCCCGCCGTGGCACTGTAGAGGGCTCCGTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS GCA 72 bp TCTCCTCCTGTACCTCCTGGACGGAGCCCTCTACAGTaGCACGGCGGGACCCTGGCAGCTCACCTGTGCGTC +
Preference number: 6 (lower is better)
Translates to: SPPVPPGRSPLQ*HGGTLAAHLCV
Trigger: GACGCACAGGTGAGCTGCCAGGGTCCCGCCGTGGCACTGTAGAGGGCTCCGTCCAGGAGGTACAGGAGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS TCA 72 bp CCCAGCCTCAGGGCATCAGCTTCTTCTGGAGCGCTGTaGAGGCTGGGCCACGCAGAGGAGCATGCAGCCGTG +
Preference number: 6 (lower is better)
Translates to: PSLRASASSGAL*RLGHAEEHAAV
Trigger: CACGGCTGCATGCTCCTCTGCGTGGCCCAGCCTTCACAGCGCTCCAGAAGAAGCTGATGCCCTGAGGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440503.1
CDS GCA 72 bp TGTTCAGGGTCCAGGGCAGCAAACTGGCGGGCCGCCTaGTCTTCTTGCTCCTCACTCAGGGCCCTGTCACGG +
Preference number: 6 (lower is better)
Translates to: CSGSRAANWRAA*SSCSSLRALSR
Trigger: CCGTGACAGGGCCCTGAGTGAGGAGCAAGAAGAGCAGGCGGCCCGCCAGTTTGCTGCCCTGGACCCTGAACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 72 bp TTTGCAAAACCAAGAGTGCTGGGCCCGGCGGCACTCTaGCTCACTGACGGTGCTCCCACTGCCCCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: FAKPRVLGPAAL*LTDGAPTAPSQ
Trigger: CTGGCTCGGGGCAGTGGGAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 90 bp GACACAGCCAGACTCACCTTCTGCACCTGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATGGCTCGGGACCGTCCGGGTGCGGGA +
Preference number: 6 (lower is better)
Translates to: DTARLTFCTCSTVCR*DINTPMARDRPGAG
Trigger: TCCCGCACCCGGACGGTCCCGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGTGAGTCTGGCTGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS CAA 90 bp AAACCCTGGTGCAGACCCTTCTGCACCTGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATGGCTCGGGACCGTCCGGGTGCGGGA +
Preference number: 6 (lower is better)
Translates to: KPWCRPFCTCSTVCR*DINTPMARDRPGAG
Trigger: TCCCGCACCCGGACGGTCCCGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGGTCTGCACCAGGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476115.2
CDS GCA 72 bp CCCTGGTGCAGACCCTTCTGCACCTGCTCCACTGTCTaGCGCTTGGACATCAACACCCCCATGGCTCGGGAC +
Preference number: 6 (lower is better)
Translates to: PWCRPFCTCSTV*RLDINTPMARD
Trigger: GTCCCGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGGTCTGCACCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476115.2
CDS CCA 72 bp AGCCCATGCGGCGCAGGCAGCCATCATGGAAAACCCTaGTGCAGACCCTGCACGGGAAGAGGCTCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: SPCGAGSHHGKP*CRPCTGRGSQL
Trigger: CAGCTGAGAGCCTCTTCCCGTGCAGGGTCTGCACCAGGGTTTTCCATGATGGCTGCCTGCGCCGCATGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS CCA 72 bp GGAGCCTCTGGGAACCGTTTGCAAAACCAAGAGTGCTaGGCCCGGCGGCACTCTGCCTCACTGACGGTGCTC +
Preference number: 6 (lower is better)
Translates to: GASGNRLQNQEC*ARRHSASLTVL
Trigger: GAGCACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 72 bp GTGGGCCATCTCCGTCACCTCCGCTGCACTGTCTCCTaGGATGTAGCCCATGCGGCGCAGGCAGCCATCATG +
Preference number: 6 (lower is better)
Translates to: VGHLRHLRCTVS*DVAHAAQAAIM
Trigger: CATGATGGCTGCCTGCGCCGCATGGGCTACATCCAAGGAGACAGTGCAGCGGAGGTGACGGAGATGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 72 bp TGCAGACCCTTCTGCACCTGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATGGCTCGGGACCGTCCG +
Preference number: 6 (lower is better)
Translates to: CRPFCTCSTVCR*DINTPMARDRP
Trigger: CGGACGGTCCCGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGGTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476115.2
CDS GCA 72 bp GCCTGTTTCTGTGTGGGCCATCTCCGTCACCTCCGCTaGACTGTCTCCTTGGATGTAGCCCATGCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: ACFCVGHLRHLR*TVSLDVAHAAQ
Trigger: CTGCGCCGCATGGGCTACATCCAAGGAGACAGTGCAGCGGAGGTGACGGAGATGGCCCACACAGAAACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 72 bp GAAGGAGCCTCTGGGAACCGTTTGCAAAACCAAGAGTaGTGGGCCCGGCGGCACTCTGCCTCACTGACGGTG +
Preference number: 6 (lower is better)
Translates to: EGASGNRLQNQE*WARRHSASLTV
Trigger: CACCGTCAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGCTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 72 bp GCTCTGTGGGCAGCAGGGTCTTGTCCTGACTCTTGCTaGTGCTGCTGGCTGGGCTGCTATCTGCGATGGGAC +
Preference number: 6 (lower is better)
Translates to: ALWAAGSCPDSC*CCWLGCYLRWD
Trigger: GTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCTGCCCACAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 72 bp AGACTCACCTTCTGCACCTGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATGGCTCGGGACCGTCCG +
Preference number: 6 (lower is better)
Translates to: RLTFCTCSTVCR*DINTPMARDRP
Trigger: CGGACGGTCCCGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGTGAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 72 bp GCAGGCAGCCATCATGGAAAACCCTGGTGCAGACCCTaGACGGGAAGAGGCTCTCAGCTGTCCAGACCTCAC +
Preference number: 6 (lower is better)
Translates to: AGSHHGKPWCRP*TGRGSQLSRPH
Trigger: GTGAGGTCTGGACAGCTGAGAGCCTCTTCCCGTGCAGGGTCTGCACCAGGGTTTTCCATGATGGCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242315.3
CDS GCA 72 bp TGGGCAGCAGGGTCTTGTCCTGACTCTTGCTGCTGCTaGTGGCTGGGCTGCTATCTGCGATGGGACCCACAT +
Preference number: 6 (lower is better)
Translates to: WAAGSCPDSCCC*WLGCYLRWDPH
Trigger: ATGTGGGTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAGGACAAGACCCTGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 90 bp ACATGGCTGATGCTGACACTGCAGGAAGGAGCCTCTGGGAACCGTTaGCAAAACCAAGAGTGCTGGGCCCGGCGGCACTCTGCCTCACTG +
Preference number: 6 (lower is better)
Translates to: TWLMLTLQEGASGNR*QNQECWARRHSASL
Trigger: CAGTGAGGCAGAGTGCCGCCGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGCTCCTTCCTGCAGTGTCAGCATCAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 90 bp GACACAGCCAGACTCACCTTCTGCACCTGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATGGCTCTTTGCAGTACCCCACTGGCC +
Preference number: 6 (lower is better)
Translates to: DTARLTFCTCSTVCR*DINTPMALCSTPLA
Trigger: GGCCAGTGGGGTACTGCAAAGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGTGAGTCTGGCTGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486477.1
CDS TCA 72 bp TGCGTCGGATGGAAGGCCTGTCCCGCAGCCCATCCTTaGAAGCAGACACAGCCAGACTCACCTTCTGCACCT +
Preference number: 6 (lower is better)
Translates to: CVGWKACPAAHP*KQTQPDSPSAP
Trigger: AGGTGCAGAAGGTGAGTCTGGCTGTGTCTGCTTTCAAGGATGGGCTGCGGGACAGGCCTTCCATCCGACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS GCA 72 bp CTGACTCTTGCTGCTGCTGCTGGCTGGGCTGCTATCTaGGATGGGACCCACATGGCTGATGCTGACACTGCA +
Preference number: 6 (lower is better)
Translates to: LTLAAAAGWAAI*DGTHMADADTA
Trigger: TGCAGTGTCAGCATCAGCCATGTGGGTCCCATCGCAGATAGCAGCCCAGCCAGCAGCAGCAGCAAGAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 90 bp GGCTGCGCTGTTGGGGCGAGCAGCCAGGATGTAGAGGACATTCTCTaGCAGGAAGGTAGGCCAGTCCACAAATCTGGACTCCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: GCAVGASSQDVEDIL*QEGRPVHKSGLLLC
Trigger: ACAGAGCAGGAGTCCAGATTTGTGGACTGGCCTACCTTCCTGCAAGAGAATGTCCTCTACATCCTGGCTGCTCGCCCCAACAGCGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 72 bp ACTACTCTCTTCCTGGACCACCGAGGTTCCTGCTTCTaGTTCCTTCTCCTCCTGTACCTCCTGGACGGAGCC +
Preference number: 6 (lower is better)
Translates to: TTLFLDHRGSCF*FLLLLYLLDGA
Trigger: GGCTCCGTCCAGGAGGTACAGGAGGAGAAGGAAGCAGAAGCAGGAACCTCGGTGGTCCAGGAAGAGAGTAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000486477.1
CDS CCA 72 bp CACATGGCTGATGCTGACACTGCAGGAAGGAGCCTCTaGGAACCGTTTGCAAAACCAAGAGTGCTGGGCCCG +
Preference number: 6 (lower is better)
Translates to: HMADADTAGRSL*EPFAKPRVLGP
Trigger: CGGGCCCAGCACTCTTGGTTTTGCAAACGGTTCCCAGAGGCTCCTTCCTGCAGTGTCAGCATCAGCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS GCA 72 bp GGGAGAGGATGTCACTGTCCTCAAACCGAGCTTCTCTaGTCCATGCTATCCTGGGGGCTTCAGGTGAATGGC +
Preference number: 6 (lower is better)
Translates to: GRGCHCPQTELL*SMLSWGLQVNG
Trigger: GCCATTCACCTGAAGCCCCCAGGATAGCATGGAGCAGAGAAGCTCGGTTTGAGGACAGTGACATCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS CAA 72 bp AGACTCACCTTCTGCACCTGCTCCACTGTCTGCCGCTaGGACATCAACACCCCCATGGCTCTTTGCAGTACC +
Preference number: 6 (lower is better)
Translates to: RLTFCTCSTVCR*DINTPMALCST
Trigger: GGTACTGCAAAGAGCCATGGGGGTGTTGATGTCCAAGCGGCAGACAGTGGAGCAGGTGCAGAAGGTGAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486477.1
CDS CAA 72 bp GTTGGGGCGAGCAGCCAGGATGTAGAGGACATTCTCTaGCAGGAAGGTAGGCCAGTCCACAAATCTGGACTC +
Preference number: 6 (lower is better)
Translates to: VGASSQDVEDIL*QEGRPVHKSGL
Trigger: GAGTCCAGATTTGTGGACTGGCCTACCTTCCTGCAAGAGAATGTCCTCTACATCCTGGCTGCTCGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2
CDS TCA 72 bp AGTGTCAGGGAGCAATCAGGGATGACTTTACACCGCTaGAAGGTCTCCGTGAGGCTATACATTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SVREQSGMTLHR*KVSVRLYISSS
Trigger: TGAGGAGGAAATGTATAGCCTCACGGAGACCTTTCAGCGGTGTAAAGTCATCCCTGATTGCTCCCTGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242315.3
ENST00000476115.2