RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF21B (Homo sapiens)

Ensembl gene IDs: ENSG00000056487

Ensembl transcript IDs: ENST00000313237.10, ENST00000396103.7, ENST00000403565.5, ENST00000414269.1, ENST00000420689.1, ENST00000460507.5, ENST00000462631.1, ENST00000474327.5, ENST00000490679.5, ENST00000491522.1, ENST00000495348.1, ENST00000629843.2

Found 807 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTaGATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCG +
Preference number: 1 (lower is better)
Translates to: SCGICRPPRSAPLRV*MRVCGRGRVRCTHA
Trigger: CGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 90 bp GCTGCCACTGCCCACCCTGGATGCAGAAGCCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTC +
Preference number: 1 (lower is better)
Translates to: AATAHPGCRSPWQQV*SPKAGTSRATALSF
Trigger: GAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 90 bp CGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTaGCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGTGTC +
Preference number: 1 (lower is better)
Translates to: RSRENDRRDRGSCGI*RPPRSAPLRVCMRV
Trigger: GACACGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 90 bp GTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTaGAATTCGGCACCATGTGATATGCTCGGGGTGGGAGCCCGTGGC +
Preference number: 1 (lower is better)
Translates to: VSVVVAACDAHTRVQ*NSAPCDMLGVGARG
Trigger: GCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 90 bp AGTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTaGGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGC +
Preference number: 1 (lower is better)
Translates to: SFSRSRENDRRDRGS*GICRPPRSAPLRVC
Trigger: GCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 90 bp CCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGTGTCTGTaGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAATT +
Preference number: 1 (lower is better)
Translates to: PASSLCTSACVHACL*SWPRAMHTRVFSAI
Trigger: AATTGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR TCA 90 bp CGCGTGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCT +
Preference number: 1 (lower is better)
Translates to: RVRCTHACSVQFGTM*YARGGSPWLLDAYP
Trigger: AGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 90 bp GCTGCAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGAGTGCCCCAGGCCCGCCCGCCCACC +
Preference number: 1 (lower is better)
Translates to: AAIRNPNNTDRKGPR*FCKGDGVPQARPPT
Trigger: GGTGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 90 bp GGCACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATaGTCACCTCCGACAGTGTCTTTCAAGTTAAACAGCTGCAATTCG +
Preference number: 1 (lower is better)
Translates to: GTGSGGDHCSVPAPR*SPPTVSFKLNSCNS
Trigger: CGAATTGCAGCTGTTTAACTTGAAAGACACTGTCGGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTaGGAATCGGGCAAGGGTGACAAGCTGCCACTGCCCACCCTGGAT +
Preference number: 1 (lower is better)
Translates to: PGRLSCCAESLRTGM*ESGKGDKLPLPTLD
Trigger: ATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGCCCGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 90 bp GCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGT +
Preference number: 1 (lower is better)
Translates to: AMHTRVFSAIRHHVI*SGWEPVAPGRLSCC
Trigger: ACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 90 bp ACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGTaGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGTCC +
Preference number: 1 (lower is better)
Translates to: TRVFSAIRHHVICSG*EPVAPGRLSCCAES
Trigger: GGACTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 90 bp GAAGCTGAAGACATGGACATCGCAAGCCACGCGGTAATGCATACTTaGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTC +
Preference number: 1 (lower is better)
Translates to: EAEDMDIASHAVMHT*HRVANIEDVCLTRF
Trigger: GAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATGCATTACCGCGTGGCTTGCGATGTCCATGTCTTCAGCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR TCA 90 bp ATCGGCTCTTCCAAAGGAGACAAGAAAGGGCTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCC +
Preference number: 1 (lower is better)
Translates to: IGSSKGDKKGLQSLS*MIQPQGENLPNAAP
Trigger: GGGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCTTTCTTGTCTCCTTTGGAAGAGCCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 2 (lower is better)
Translates to: RENDRRDRGSCGICRPPRAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACTCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 2 (lower is better)
Translates to: WSPKAGTSRATALSFLPNSGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RENDRRDRGSCGICRPPRSTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CAA 90 bp GCAAGGGTGACAAGCTGCCACTGCCCACCCTGGATGCAGAAGCCCTaGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCCGAGCCAC +
Preference number: 2 (lower is better)
Translates to: ARVTSCHCPPWMQKP*AASLVPEGRNLPSH
Trigger: GTGGCTCGGGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGGAATCGGGCAAGGGTaGCAAGCTGCCACTGCCCAC +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMGIGQG*QAATAH
Trigger: GTGGGCAGTGGCAGCTTGTCACCCTTGCCCGATTCC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGTCCCGGCGCCCAGATaGTCACCTCCGACAGTGTCT +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMVPAPR*SPPTVS
Trigger: AGACACTGTCGGAGGTGAGCATCTGGGCGCCGGGAC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCATCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 2 (lower is better)
Translates to: HACLWSWPRAMHTRVFSASGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGAAGGGCACAGGCTCTaGCGGGGATCACTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMEGHRL*RGSLQR
Trigger: ACGCTGCAGTGATCCCCGCCAGAGCCTGTGCCCTTC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTTCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCASGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGCAAGGGTGACAAGCTaGCACTGCCCACCCTGGATG +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMARVTS*HCPPWM
Trigger: CATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGTGCCACTGCCCACCCTaGATGCAGAAGCCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMCHCPP*MQKPLA
Trigger: TGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCA...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGGAATCGGGCAAGGGTaGCAAGCTGCCACTGCCCAC +
Preference number: 2 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAGIGQG*QAATAH
Trigger: GTGGGCAGTGGCAGCTTGTCACCCTTGCCCGATTCC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTTCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCASTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: QLRDLPASSLCTSACVHATAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 2 (lower is better)
Translates to: WSPKAGTSRATALSFLPNRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 2 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCATGCCACTGCCCACCCTaGATGCAGAAGCCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: HACLWSWPRAMHTRVFSACHCPP*MQKPLA
Trigger: TGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCA...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTCGGGGTGGGAGCCCGTaGCTCCTGGACGCTTATCCT +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFRGGSP*LLDAYP
Trigger: AGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCG...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGCTTATCCTGTTGTGCTaGGTCCCTCAGGACTGGGAT +
Preference number: 2 (lower is better)
Translates to: QLRDLPASSLCTSACVHALILLC*VPQDWD
Trigger: ATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAG...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCTCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVSTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: PGRLSCCAESLRTGMWESGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCCCCCACAACAGGGTTaGAGCTCCACTCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEPPQQG*SSTLPR
Trigger: TCTGGGCAGAGTGGAGCTGCAACCCTGTTGTGGGGG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGCAAGGGTGACAAGCTaGCACTGCCCACCCTGGATG +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAARVTS*HCPPWM
Trigger: CATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTCTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCALSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 2 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAELSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCGTGTCTGTGGTCGTaGCCGCGTGCGATGCACACA +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFACLWS*PRAMHT
Trigger: TGTGTGCATCGCACGCGGCCACGACCACAGACACGC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGTGCATGCGTGTCTGTaGTCGTGGCCGCGTGCGATG +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFVHACL*SWPRAM
Trigger: CATCGCACGCGGCCACGACCACAGACACGCATGCAC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 2 (lower is better)
Translates to: QLRDLPASSLCTSACVHACPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 2 (lower is better)
Translates to: RENDRRDRGSCGICRPPRCPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCATAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGTGACAAGCTGCCACTaGCCACCCTGGATGCAGAAG +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAVTSCH*PPWMQK
Trigger: CTTCTGCATCCAGGGTGGGCAGTGGCAGCTTGTCAC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTCTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFLSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGACCTCCTAGGAGCGTaGGGCATTGAGGAACTACCT +
Preference number: 2 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFDLLGA*GIEELP
Trigger: AGGTAGTTCCTCAATGCCCCACGCTCCTAGGAGGTC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGACACCAATAGGCGGTaGCCTCAGTGGAGACTGCGT +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFDTNRR*PQWRLR
Trigger: ACGCAGTCTCCACTGAGGGCACCGCCTATTGGTGTC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 2 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTTCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 2 (lower is better)
Translates to: THQRQTESKRLAKGRRQPSGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCACCTCTGCGTGTGTaGATGCGTGTCTGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFAPLRV*MRVCGR
Trigger: ACGACCACAGACACGCATGCACACACGCAGAGGTGC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGACCTCCTAGGAGCGTaGGGCATTGAGGAACTACCT +
Preference number: 2 (lower is better)
Translates to: VICSGWEPVAPGRLSCCADLLGA*GIEELP
Trigger: AGGTAGTTCCTCAATGCCCCACGCTCCTAGGAGGTC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGAAGGGCACAGGCTCTaGCGGGGATCACTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGEGHRL*RGSLQR
Trigger: ACGCTGCAGTGATCCCCGCCAGAGCCTGTGCCCTTC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGCAAGAAGGGAGGAGTaGAATACTTATCGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: WSPKAGTSRATALSFLPNARREE*NTYRLF
Trigger: GAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGCATCAACGGCAAACTaGGTCCAAGAGATTGGCAAA +
Preference number: 2 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSASTAN*VQEIGK
Trigger: TTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTAAACCTGCCAAATGCTaGCCCCCACAACAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFKPAKC*PPQQGC
Trigger: GCAACCCTGTTGTGGGGGGCAGCATTTGGCAGGTTT...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: WSPKAGTSRATALSFLPNLQSLS*MIQPQG
Trigger: TCCTTGGGGTTGAATCATTCAACTTAACGACTGAAG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAATCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: ALARREEWNTYRLFQRRQSTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCGCCAGAGGGAGGCCGTaGAGAGCAGGGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFARGRP*RAGPGS
Trigger: GCTTCCAGGCCCTGCTCTCCACGGCCTCCCTCTGGC...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 2 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCAAGAAGGGAGGAGTaGAATACTTATCGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAARREE*NTYRLF
Trigger: GAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGAAGGGCACAGGCTCTaGCGGGGATCACTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASEGHRL*RGSLQR
Trigger: ACGCTGCAGTGATCCCCGCCAGAGCCTGTGCCCTTC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: HACLWSWPRAMHTRVFSALQSLS*MIQPQG
Trigger: TCCTTGGGGTTGAATCATTCAACTTAACGACTGAAG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTTTTTGGCATAGTGTCTaGACTGGCAAGAAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFFWHSV*TGKKGG
Trigger: TCCTCCCTTCTTGCCAGTGCAGACACTATGCCAAAA...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCCGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTG +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFRHHVI*SGWEPV
Trigger: CACGGGCTCCCACCCCGAGCATATCACATGGTGCCG...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTGTGGTCGTGGCCGCGTaGGATGCACACACGCGTGTT +
Preference number: 2 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTVVVAA*DAHTRV
Trigger: AACACGCGTGTGTGCATCGCACGCGGCCACGACCAC...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CAA 90 bp GGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCATTaGTACCTTGAAGCAGAGACTACTAGAAGCAGAAAGGAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: GSSSLARLPEGRCSH*YLEAETTRSRKEVS
Trigger: GCTGACTTCCTTTCTGCTTCTAGTAGTCTCTGCTTCAAGGTACAAATGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCCCCCCACAACAGGGTTaGAGCTCCACTCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFPPQQG*SSTLPR
Trigger: TCTGGGCAGAGTGGAGCTGCAACCCTGTTGTGGGGG...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTCTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 2 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTLSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFTAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCAAACCTGCCAAATGCTaGCCCCCACAACAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFKPAKC*PPQQGC
Trigger: GCAACCCTGTTGTGGGGGGCAGCATTTGGCAGGTTT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTAAACCTGCCAAATGCTaGCCCCCACAACAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTKPAKC*PPQQGC
Trigger: GCAACCCTGTTGTGGGGGGCAGCATTTGGCAGGTTT...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTGACCTCCTAGGAGCGTaGGGCATTGAGGAACTACCT +
Preference number: 2 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTDLLGA*GIEELP
Trigger: AGGTAGTTCCTCAATGCCCCACGCTCCTAGGAGGTC...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAATGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 2 (lower is better)
Translates to: ALARREEWNTYRLFQRRQCPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCCTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFLQSLS*MIQPQG
Trigger: TCCTTGGGGTTGAATCATTCAACTTAACGACTGAAG...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: ITLLKHVTQSIREENQTNQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 2 (lower is better)
Translates to: ITLLKHVTQSIREENQTNRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR TCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGCATCAACGGCAAACTaGGTCCAAGAGATTGGCAAA +
Preference number: 2 (lower is better)
Translates to: ITLLKHVTQSIREENQTNASTAN*VQEIGK
Trigger: TTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 72 bp GCCCACCCTGGATGCAGAAGCCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCC +
Preference number: 3 (lower is better)
Translates to: AHPGCRSPWQQV*SPKAGTSRATA
Trigger: GGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGCCGGATCTTCCAGCTaGGCCAGGCTTCCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSAGSSS*ARLPEG
Trigger: CCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp GAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTaGCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: ENDRRDRGSCGI*RPPRSAPLRVC
Trigger: GCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp CGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTaGGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTG +
Preference number: 3 (lower is better)
Translates to: RSRENDRRDRGS*GICRPPRSAPL
Trigger: CAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGCCGGATCTTCCAGCTaGGCCAGGCTTCCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAAGSSS*ARLPEG
Trigger: CCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp CCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCCCAGGCCCGCCCGCCC +
Preference number: 3 (lower is better)
Translates to: PNNTDRKGPRWF*KGDGVPQARPP
Trigger: GGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR TCA 72 bp GGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTaGGTCCCTCAGGACTGGGATGTGGGAATCGGGCAA +
Preference number: 3 (lower is better)
Translates to: GARGSWTLILLC*VPQDWDVGIGQ
Trigger: TTGCCCGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR TCA 72 bp TGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGCCCGTGGCTCCTGGAC +
Preference number: 3 (lower is better)
Translates to: CTHACSVQFGTM*YARGGSPWLLD
Trigger: GTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp GTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTaGAATTCGGCACCATGTGATATGCTCGGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: VVAACDAHTRVQ*NSAPCDMLGVG
Trigger: TCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp GTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATaGACACACGCGTGTTCAGTGCAATTCGGCACCATG +
Preference number: 3 (lower is better)
Translates to: VCMRVCGRGRVR*THACSVQFGTM
Trigger: CATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp TGCGTGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTaGGATGCACACACGCGTGTTCAGTGCAATTCGGCA +
Preference number: 3 (lower is better)
Translates to: CVCACVSVVVAA*DAHTRVQCNSA
Trigger: TGCCGAATTGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACACGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGACTGAGTCCAAGAGATaGGCAAAAGGAAGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: QLRDLPASSLCTSACVHATESKR*AKGRRQ
Trigger: CTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGT...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGGGAGGTGTTCCCATTaGTACCTTGAAGCAGAGACT +
Preference number: 3 (lower is better)
Translates to: WSPKAGTSRATALSFLPNGRCSH*YLEAET
Trigger: AGTCTCTGCTTCAAGGTACAAATGGGAACACCTCCC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp TCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATaGTCACCTCCGACAGTGTCTTTCAAGTTAAACAGC +
Preference number: 3 (lower is better)
Translates to: SGGDHCSVPAPR*SPPTVSFKLNS
Trigger: GCTGTTTAACTTGAAAGACACTGTCGGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp ACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTA +
Preference number: 3 (lower is better)
Translates to: TRVFSAIRHHVI*SGWEPVAPGRL
Trigger: TAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 72 bp CGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGAGTGCCCCAGGCCCGC +
Preference number: 3 (lower is better)
Translates to: RNPNNTDRKGPR*FCKGDGVPQAR
Trigger: GCGGGCCTGGGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAACTGAGTCCAAGAGATaGGCAAAAGGAAGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: HACLWSWPRAMHTRVFSATESKR*AKGRRQ
Trigger: CTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGT...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 3 (lower is better)
Translates to: WSPKAGTSRATALSFLPNASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGTGGATGCAGAAGCCCTaGGCAGCAAGTCTGGTCCCC +
Preference number: 3 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGWMQKP*AASLVP
Trigger: GGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCA...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGTACCCCCTGTGAATTaGGAGGGCACAGGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: THQRQTESKRLAKGRRQPVPPVN*EGTGPH
Trigger: GTGCGGCCCTGTGCCCTCCAAATTCACAGGGGGTAC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 72 bp TTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGTaGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGT +
Preference number: 3 (lower is better)
Translates to: FSAIRHHVICSG*EPVAPGRLSCC
Trigger: ACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCACATGGTGCCGAATTGCACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGTACCCCCTGTGAATTaGGAGGGCACAGGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASVPPVN*EGTGPH
Trigger: GTGCGGCCCTGTGCCCTCCAAATTCACAGGGGGTAC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGTACCCCCTGTGAATTaGGAGGGCACAGGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPVPPVN*EGTGPH
Trigger: GTGCGGCCCTGTGCCCTCCAAATTCACAGGGGGTAC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGGGAGGTGTTCCCATTaGTACCTTGAAGCAGAGACT +
Preference number: 3 (lower is better)
Translates to: PGRLSCCAESLRTGMWESGRCSH*YLEAET
Trigger: AGTCTCTGCTTCAAGGTACAAATGGGAACACCTCCC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 3 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CCA 72 bp GACATGGACATCGCAAGCCACGCGGTAATGCATACTTaGCACAGAGTAGCCAATATAGAAGACGTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: DMDIASHAVMHT*HRVANIEDVCL
Trigger: GAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATGCATTACCGCGTGGCTTGCGATGTCCATGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR TCA 72 bp AACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGCAAACTGAGTCCAAGA +
Preference number: 3 (lower is better)
Translates to: NRVAAPLCPETP*EKRINGKLSPR
Trigger: TCTTGGACTCAGTTTGCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 3 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACTGGATGCAGAAGCCCTaGGCAGCAAGTCTGGTCCCC +
Preference number: 3 (lower is better)
Translates to: ITLLKHVTQSIREENQTNWMQKP*AASLVP
Trigger: GGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCA...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR TCA 72 bp TCCAAAGGAGACAAGAAAGGGCTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGAGAAAACCTGCCAAAT +
Preference number: 3 (lower is better)
Translates to: SKGDKKGLQSLS*MIQPQGENLPN
Trigger: ATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCTTTCTTGTCTCCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR GCA 72 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTaGCTCACACGGTTCACTTTGTTCATCAATAAAAGA +
Preference number: 3 (lower is better)
Translates to: HTWHRVANIEDV*LTRFTLFINKR
Trigger: TCTTTTATTGATGAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGTTCCCATTTGTACCTaGAAGCAGAGACTACTAGAA +
Preference number: 3 (lower is better)
Translates to: ITLLKHVTQSIREENQTNVPICT*KQRLLE
Trigger: TTCTAGTAGTCTCTGCTTCAAGGTACAAATGGGAAC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCCTTGGGCGCCGTCTTaGGGGGCGGCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSPWAPS*GAAPGS
Trigger: GCTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCTCCGGCGCGCGCGCCTaGATCTCGTTGGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSSGARA*ISLGLG
Trigger: GCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGA...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR TCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGCATTTCTGCACTGCTaGCGCCAGCCGCCGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSAFLHC*RQPPVP
Trigger: CGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATGC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGCCGCGACTCTGCCGTaGTCTCGGGCTGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSAATLP*SRAASA
Trigger: TGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGGGCGGCCGCGACTCTaGCGTGCTCTCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMGRPRL*RALGLR
Trigger: ACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGAGGCCCCCGGGCAGGTaGCGCAGGGCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHARPPGR*RRAAGW
Trigger: CCAACCTGCAGCCCTGCGGCACCTGCCCGGGGGCCT...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCAGGCGGTCCAGGGATaGCTGGGTGCCCCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNQAVQG*LGAPLA
Trigger: CGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCTGGAATGTTGGGGGCTaGTTGGGTGGCCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSWNVGG*LGGRSR
Trigger: CCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCA...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGGGCGGCCGCGACTCTaGCGTGCTCTCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSGRPRL*RALGLR
Trigger: ACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCTTGTGGCCCTGGGGGTaGTGGACGGTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSLWPWG*WTVGCV
Trigger: CACACACCCCACCGTCCAGCACCCCCAGGGCCACAA...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACATGTTGGGGGCTGCTTaGGTGGCCGGTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNMLGAA*VAGPGP
Trigger: CGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACAT...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGATGTTGGGGGCTGCTTaGGTGGCCGGTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAMLGAA*VAGPGP
Trigger: CGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACAT...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGGGCCCGGCCAGCAGTaGGGCAGGGCTAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNGPGQQ*GRASGR
Trigger: ACGACCACTAGCCCTGCCCCACTGCTGGCCGGGCCC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCGGGGTGGGAGCCCGTaGCTCCTGGACGCTTATCCT +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSRGGSP*LLDAYP
Trigger: AGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGCGGCTCCAGGCAGCTaGGGTGGTAGGCCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAAAPGS*GGRPPG
Trigger: GCCCGGGGGCCTACCACCTCAGCTGCCTGGAGCCGC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCCAGGCGGTCCAGGGATaGCTGGGTGCCCCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSQAVQG*LGAPLA
Trigger: CGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTG...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGTGTGTGGCTGCCACTaGGGGCTTGGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMVCGCH*GLGPGP
Trigger: GGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACAC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCAGGCCACCCCCGCACTaGTCAGCGGAGAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSRPPPH*SAERRG
Trigger: CCCTCGCCTCTCCGCTGAGCAGTGCGGGGGTGGCCT...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGCCGCGACTCTGCCGTaGTCTCGGGCTGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNAATLP*SRAASA
Trigger: TGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGCCGCGACTCTGCCGTaGTCTCGGGCTGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRAATLP*SRAASA
Trigger: TGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGGCCCCCGGGCAGGTaGCGCAGGGCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFRPPGR*RRAAGW
Trigger: CCAACCTGCAGCCCTGCGGCACCTGCCCGGGGGCCT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCCAGGGATGACTGGGTaGCCCTCTGGCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMPGMTG*PSGGPA
Trigger: TGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGCGCGCCCCGAGCCGTaGAAGTTTGCAGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSARPEP*KFAGRG
Trigger: ACCCCGGCCTGCAAACTTGCACGGCTCGGGGCGCGC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACGGTGCTGGGGGCCATaGCGGCGGCATTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSARCWGP*RRHCWG
Trigger: CCCCCAGCAATGCCGCCGCCATGGCCCCCAGCACCG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGAGATGGCTCCTCTGTaGGCGGCCGCGACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMEMAPL*AAATLP
Trigger: CGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGACTGGGTGCCCCTCTaGCGGGCCAGCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMDWVPL*RASRLV
Trigger: GACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGCTGCCACTGAGGGCTTaGTCCAGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHALPLRA*SRARPA
Trigger: TGCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAG...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGGGGGTGCTGGACGGTaGGGTGTGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRGGAGR*GVWLPL
Trigger: CAGTGGCAGCCACACACCCCACCGTCCAGCACCCCC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCTGGCCCTGGGGGTGCTaGACGGTGGGGTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRWPWGC*TVGCVA
Trigger: AGCCACACACCCCACCGTCCAGCACCCCCAGGGCCA...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCCCTCGGGGTCAGTTGTaGCCCTGGGGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRPRGQL*PWGCWT
Trigger: CGTCCAGCACCCCCAGGGCCACAACTGACCCCGAGG...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCGGCTCCAGGCAGCTaGGGTGGTAGGCCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFAAPGS*GGRPPG
Trigger: GCCCGGGGGCCTACCACCTCAGCTGCCTGGAGCCGC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMAAIRG*LSWSCF
Trigger: GAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAAAIRG*LSWSCF
Trigger: GAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNAAIRG*LSWSCF
Trigger: GAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGGCCACCCCCGCACTaGTCAGCGGAGAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFRPPPH*SAERRG
Trigger: CCCTCGCCTCTCCGCTGAGCAGTGCGGGGGTGGCCT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGGGCGGCCGCGACTCTaGCGTGCTCTCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPGRPRL*RALGLR
Trigger: ACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCCCAGGGATGACTGGGTaGCCCTCTGGCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSPGMTG*PSGGPA
Trigger: TGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGG...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGTTGTGGCCCTGGGGGTaGTGGACGGTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMLWPWG*WTVGCV
Trigger: CACACACCCCACCGTCCAGCACCCCCAGGGCCACAA...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGGCAGCTGCGGGATTTaGCGGCCTCCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMGSCGI*RPPRSA
Trigger: TGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACAGGGACCGTGGCAGCTaGGGGATTTGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNRDRGS*GICRPP
Trigger: AGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCT...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGGCGCGCCCCGAGCCGTaGAAGTTTGCAGGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGARPEP*KFAGRG
Trigger: ACCCCGGCCTGCAAACTTGCACGGCTCGGGGCGCGC...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR GCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACTCGCCGTTCTGTGGCTaGCGCCTCATCGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNSPFCG*RLIGAA
Trigger: AGCTGCCCCGATGAGGCGGCAGCCACAGAACGGCGA...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGTCGCCGTTCTGTGGCTaGCGCCTCATCGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMSPFCG*RLIGAA
Trigger: AGCTGCCCCGATGAGGCGGCAGCCACAGAACGGCGA...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR CCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSRGCLS*SCFLRS
Trigger: CGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCCTTCTGCTGGCACCTaGGGCACACCCACACGCCCT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNPSAGT*GTPTRP
Trigger: AGGGCGTGTGGGTGTGCCCCAGGTGCCAGCAGAAGG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCCCTTCTGCTGGCACCTaGGGCACACCCACACGCCCT +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRPSAGT*GTPTRP
Trigger: AGGGCGTGTGGGTGTGCCCCAGGTGCCAGCAGAAGG...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCCTGCCACTGAGGGCTTaGTCCAGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSLPLRA*SRARPA
Trigger: TGCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAG...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGGACGGTGGGGTGTGTaGCTGCCACTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRGRWGV*LPLRAW
Trigger: CCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCTGGCCCTGGGGGTGCTaGACGGTGGGGTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSWPWGC*TVGCVA
Trigger: AGCCACACACCCCACCGTCCAGCACCCCCAGGGCCA...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGCGGGGTGGGAGCCCGTaGCTCCTGGACGCTTATCCT +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHARGGSP*LLDAYP
Trigger: AGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCG...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCCGGGGTGGGAGCCCGTaGCTCCTGGACGCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRRGGSP*LLDAYP
Trigger: AGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCG...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGCGCTGGCACATGGCTaGCAGTGTTGTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMALAHG*QCCWRW
Trigger: CCACCGCCAACAACACTGTCAGCCATGTGCCAGCGC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCATTTCTGCACTGCTaGCGCCAGCCGCCGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAAFLHC*RQPPVP
Trigger: CGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTCAGGCGGTCCAGGGATaGCTGGGTGCCCCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAQAVQG*LGAPLA
Trigger: CGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTG...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGTGTGTGGCTGCCACTaGGGGCTTGGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAVCGCH*GLGPGP
Trigger: GGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACAC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGGTGTGTGGCTGCCACTaGGGGCTTGGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGVCGCH*GLGPGP
Trigger: GGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACAC...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCCTCGGGCCGGCTCTaGAGCTCCATCCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAASGRL*SSIPAT
Trigger: AGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCCCGCTCCTCCAGCTaGTGGTGCTCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRSRSSS*WCSFCS
Trigger: GCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGA...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCCCAGGGATGACTGGGTaGCCCTCTGGCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFPGMTG*PSGGPA
Trigger: TGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGG...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGTCCCGGCGCCCAGATaGTCACCTCCGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRVPAPR*SPPTVS
Trigger: AGACACTGTCGGAGGTGAGCATCTGGGCGCCGGGAC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGTGACAAGCTGCCACTaGCCACCCTGGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSVTSCH*PPWMQK
Trigger: CTTCTGCATCCAGGGTGGGCAGTGGCAGCTTGTCAC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGTGGTCGTGGCCGCGTaGGATGCACACACGCGTGTT +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRVVVAA*DAHTRV
Trigger: AACACGCGTGTGTGCATCGCACGCGGCCACGACCAC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCTCGCTCTGCACCTCTaGGTGTGTGCATGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSLALHL*VCACVS
Trigger: AGACACGCATGCACACACGCAGAGGTGCAGAGCGAG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCCGGCCTCCTCGCTCTaGACCTCTGCGTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNPASSL*TSACVH
Trigger: ATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCTGGCTGCCGGGCGCTaGCACATGGCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMLAAGR*HMADSV
Trigger: AACACTGTCAGCCATGTGCCAGCGCCCGGCAGCCAG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGGAGATGGCTCCTCTGTaGGCGGCCGCGACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGEMAPL*AAATLP
Trigger: CGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTC...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGGGCCCGGCCAGCAGTaGGGCAGGGCTAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAGPGQQ*GRASGR
Trigger: ACGACCACTAGCCCTGCCCCACTGCTGGCCGGGCCC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCCAGAGGGAGGCCGTaGAGAGCAGGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAARGRP*RAGPGS
Trigger: GCTTCCAGGCCCTGCTCTCCACGGCCTCCCTCTGGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGCGTGTCTGTGGTCGTaGCCGCGTGCGATGCACACA +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNACLWS*PRAMHT
Trigger: TGTGTGCATCGCACGCGGCCACGACCACAGACACGC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGGTGCATGCGTGTCTGTaGTCGTGGCCGCGTGCGATG +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAVHACL*SWPRAM
Trigger: CATCGCACGCGGCCACGACCACAGACACGCATGCAC...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGAGGTCGCCGTTCTGTaGCTGCCGCCTCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAEVAVL*LPPHRG
Trigger: GCCCCGATGAGGCGGCAGCCACAGAACGGCGACCTC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR TCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACTGCAAGGAGCTGACCTaGGGACCCGTGACAGGCACT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNCKELT*GPVTGT
Trigger: AGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCA...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTACCTTGGGCGCCGTCTTaGGGGGCGGCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVPWAPS*GAAPGS
Trigger: GCTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGG...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGCATTTCTGCACTGCTaGCGCCAGCCGCCGGTCCCG +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPAFLHC*RQPPVP
Trigger: CGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATGC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGCATTTCTGCACTGCTaGCGCCAGCCGCCGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAAFLHC*RQPPVP
Trigger: CGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATGC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCAACTTTCCGTGGGTATaGAGACTGGTCCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSNFPWV*RLVPRG
Trigger: ACCCCGAGGGACCAGTCTTCATACCCACGGAAAGTT...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCATGGAATGTTGGGGGCTaGTTGGGTGGCCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAWNVGG*LGGRSR
Trigger: CCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCA...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGTGGAATGTTGGGGGCTaGTTGGGTGGCCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGWNVGG*LGGRSR
Trigger: CCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCA...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAAGGCCCCCGGGCAGGTaGCGCAGGGCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVRPPGR*RRAAGW
Trigger: CCAACCTGCAGCCCTGCGGCACCTGCCCGGGGGCCT...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCATCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPSGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGCCCCCACAACAGGGTTaGAGCTCCACTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAPPQQG*SSTLPR
Trigger: TCTGGGCAGAGTGGAGCTGCAACCCTGTTGTGGGGG...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGCGCCTGGATCTCGTTaGGCCTCGGCAAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNAPGSR*ASAKLC
Trigger: GCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRRGCLS*SCFLRS
Trigger: CGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCG...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCGGTGCTGGGGGCCATaGCGGCGGCATTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVRCWGP*RRHCWG
Trigger: CCCCCAGCAATGCCGCCGCCATGGCCCCCAGCACCG...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGCGGTGCTGGGGGCCATaGCGGCGGCATTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESRCWGP*RRHCWG
Trigger: CCCCCAGCAATGCCGCCGCCATGGCCCCCAGCACCG...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGGAGATGGCTCCTCTGTaGGCGGCCGCGACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEEMAPL*AAATLP
Trigger: CGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTC...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGTTCTCGGGGTTCTCCTaGGTCGGGGGCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGFSGFS*VGGRSS
Trigger: GGAAGACCGGCCCCCGACCCAGGAGAACCCCGAGAA...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGGACGGTGGGGTGTGTaGCTGCCACTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAGRWGV*LPLRAW
Trigger: CCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGCCAGAGGGAGGCCGTaGAGAGCAGGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPARGRP*RAGPGS
Trigger: GCTTCCAGGCCCTGCTCTCCACGGCCTCCCTCTGGC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGCCAGAGGGAGGCCGTaGAGAGCAGGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAARGRP*RAGPGS
Trigger: GCTTCCAGGCCCTGCTCTCCACGGCCTCCCTCTGGC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGGATGCAGAAGCCCTTaGCAGCAAGTCTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNGCRSP*QQVWSP
Trigger: CGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGCGGGGTGGGAGCCCGTaGCTCCTGGACGCTTATCCT +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGRGGSP*LLDAYP
Trigger: AGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCG...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGTCTTTGGCCTAACCTaGGGTAGCACTGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMVFGLT*GSTAAP
Trigger: AGGAGCGGCAGTGCTACCTCAGGTTAGGCCAAAGAC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCGCTGGCACATGGCTaGCAGTGTTGTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAALAHG*QCCWRW
Trigger: CCACCGCCAACAACACTGTCAGCCATGTGCCAGCGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTTGGGGGAGGTGGAGATaGTGGCGTAGGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFWGRWR*WRRPPP
Trigger: CGGGGGTGGCCTACGCCATCATCTCCACCTCCCCCA...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGGGCCTAGCGCTACCATaGAGGCGATTTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAGLALP*RRFSRG
Trigger: ACCCCGAGAAAATCGCCTTCATGGTAGCGCTAGGCC...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGCGCCGAGCCCTCGGCTaGCCCAACTCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESRRALG*PNSSGC
Trigger: GCAGCCTGAGGAGTTGGGGCAGCCGAGGGCTCGGCG...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGCACTGCCGCTCCTTaGCCGGCCAACCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFSTAAP*PANLCK
Trigger: CTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGGGTTGGCCCCTCGCTTaGAGGCGGCACAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGGWPLA*RRHSAH
Trigger: ATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACC...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCCTCCAGCTGCTGGTaGTCGTTCTGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRSSSCW*SFCSSL
Trigger: CAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGA...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCTCCCGCTCCTCCAGCTaGTGGTGCTCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFSRSSS*WCSFCS
Trigger: GCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGA...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGAACTCCAGGCATTTCTaGACTGCTGACGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMNSRHF*TADASR
Trigger: GCGGCTGGCGTCAGCAGTGCAGAAATGCCTGGAGTT...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRTAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACGTGGCCGCGTGCGATaGACACACGCGTGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSARGRVR*THACSV
Trigger: CACTGAACACGCGTGTGTGCATCGCACGCGGCCACG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGGCACCTCTGCGTGTGTaGATGCGTGTCTGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAAPLRV*MRVCGR
Trigger: ACGACCACAGACACGCATGCACACACGCAGAGGTGC...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCTCGCTCTGCACCTCTaGGTGTGTGCATGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMLALHL*VCACVS
Trigger: AGACACGCATGCACACACGCAGAGGTGCAGAGCGAG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCGAGCCGTGCAAGTTTaGAGGCCGGGGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAERAVQV*RPGCVC
Trigger: GCACACGCACCCCGGCCTGCAAACTTGCACGGCTCG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGATGTTGGGGGCTGCTTaGGTGGCCGGTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESMLGAA*VAGPGP
Trigger: CGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACAT...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGGCCTTCTGGAATGTTaGGGGCTGCTTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFGLLEC*GLLGWP
Trigger: CGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGGCCTTCTGGAATGTTaGGGGCTGCTTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAGLLEC*GLLGWP
Trigger: CGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCCTGGCTGCCGGGCGCTaGCACATGGCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFLAAGR*HMADSV
Trigger: AACACTGTCAGCCATGTGCCAGCGCCCGGCAGCCAG...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTCTGCCACTGAGGGCTTaGTCCAGGGCCCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFLPLRA*SRARPA
Trigger: TGCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAG...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCGTGTCTGTGGTCGTaGCCGCGTGCGATGCACACA +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAACLWS*PRAMHT
Trigger: TGTGTGCATCGCACGCGGCCACGACCACAGACACGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGTGCATGCGTGTCTGTaGTCGTGGCCGCGTGCGATG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAVHACL*SWPRAM
Trigger: CATCGCACGCGGCCACGACCACAGACACGCATGCAC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTCGTGGAGCTGCTTCTTaGGGTCGCCGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCARGAAS*GRRSGG
Trigger: GCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACG...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCATGCAAGGAGCTGACCTaGGGACCCGTGACAGGCACT +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSACKELT*GPVTGT
Trigger: AGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCA...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGTGGGGGAGGTGGAGATaGTGGCGTAGGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESWGRWR*WRRPPP
Trigger: CGGGGGTGGCCTACGCCATCATCTCCACCTCCCCCA...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCTGGGGGAGGTGGAGATaGTGGCGTAGGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVWGRWR*WRRPPP
Trigger: CGGGGGTGGCCTACGCCATCATCTCCACCTCCCCCA...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGGGGGAGGTGGAGATaGTGGCGTAGGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVWGRWR*WRRPPP
Trigger: CGGGGGTGGCCTACGCCATCATCTCCACCTCCCCCA...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCAGGCGGTCCAGGGATaGCTGGGTGCCCCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGQAVQG*LGAPLA
Trigger: CGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACAACTTTCCGTGGGTATaGAGACTGGTCCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNNFPWV*RLVPRG
Trigger: ACCCCGAGGGACCAGTCTTCATACCCACGGAAAGTT...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGAGCACTGCCGCTCCTTaGCCGGCCAACCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAESTAAP*PANLCK
Trigger: CTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACGGGCGGCCGCGACTCTaGCGTGCTCTCGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDGRPRL*RALGLR
Trigger: ACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCC...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGAGGCAGGGTTGGCTGTaGTTCTTCTCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHARQGWL*FFSSAP
Trigger: AGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCT...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGTTCTTTAAGGCCTTCTaGTGGCACCTGGGGCACACC +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAFFKAF*WHLGHT
Trigger: GGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAGAA...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGTCCCGCTCCTCCAGCTaGTGGTGCTCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAESRSSS*WCSFCS
Trigger: GCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGA...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGTCCCGGCGCCCAGATaGTCACCTCCGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAVPAPR*SPPTVS
Trigger: AGACACTGTCGGAGGTGAGCATCTGGGCGCCGGGAC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCACGTGGCCGCGTGCGATaGACACACGCGTGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPRGRVR*THACSV
Trigger: CACTGAACACGCGTGTGTGCATCGCACGCGGCCACG...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTAGGGACCGTGGCAGCTaGGGGATTTGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFRDRGS*GICRPP
Trigger: AGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCT...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGTTCCCAAAGCCCCGTaGTGGGTCCCTTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFVPKAP*WVPCAQ
Trigger: CTGTGCACAAGGGACCCAGCACGGGGCTTTGGGAAC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSARGCLS*SCFLRS
Trigger: CGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCTGGCTGCCGGGCGCTaGCACATGGCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAELAAGR*HMADSV
Trigger: AACACTGTCAGCCATGTGCCAGCGCCCGGCAGCCAG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCCTTCTTCTTTTTGGTaGCCTGAGCTCCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSPSSFW*PELPEM
Trigger: CATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCTTTAAGGCCTTCTGCTaGCACCTGGGGCACACCCAC +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSFKAFC*HLGHTH
Trigger: GTGGGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAA...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCATAAGAGTGCACGATaGCCAGCATCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNHKSAR*PASQSR
Trigger: CCTGGACTGGGATGCTGGCCATCGTGCACTCTTATG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGTCGTCATGGTGACCTaGAGCAGCTGCTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFVVMVT*SSCSPC
Trigger: ACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGAC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGGACGGTGGGGTGTGTaGCTGCCACTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFGRWGV*LPLRAW
Trigger: CCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGCGTGGGTATGAAGACTaGTCCCTCGGGGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHARGYED*SLGVSC
Trigger: ACAACTGACCCCGAGGGACCAGTCTTCATACCCACG...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSALSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGGAGCCCGTGGCTCCTaGACGCTTATCCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAGARGS*TLILLC
Trigger: GCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGCGTGTCTGTGGTCGTaGCCGCGTGCGATGCACACA +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPACLWS*PRAMHT
Trigger: TGTGTGCATCGCACGCGGCCACGACCACAGACACGC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCAGGAAGCTGAAGACATaGACATCGCAAGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: RENDRRDRGSCGICRPPRRKLKT*TSQATR
Trigger: CCGCGTGGCTTGCGATGTCCATGTCTTCAGCTTCCT...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGTCTTTGGCCTAACCTaGGGTAGCACTGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFVFGLT*GSTAAP
Trigger: AGGAGCGGCAGTGCTACCTCAGGTTAGGCCAAAGAC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGGCCTAGCGCTACCATaGAGGCGATTTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAGLALP*RRFSRG
Trigger: ACCCCGAGAAAATCGCCTTCATGGTAGCGCTAGGCC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGGAACAGGGGGTTGTTaGGATAGTTGGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAGTGGC*DSWRPA
Trigger: GGCTGGCCTCCAACTATCTCAACAACCCCCTGTTCC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGGAACAGGGGGTTGTTaGGATAGTTGGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFGTGGC*DSWRPA
Trigger: GGCTGGCCTCCAACTATCTCAACAACCCCCTGTTCC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCAGTGCTCATCGTGGGTaGTCTCGTTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSSAHRG*SRSSSR
Trigger: CCTGCTGGAAGAACGAGATCACCCACGATGAGCACT...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGCCGCGACTCTGCCGTaGTCTCGGGCTGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGAATLP*SRAASA
Trigger: TGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGGTTGGCCCCTCGCTTaGAGGCGGCACAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFGWPLA*RRHSAH
Trigger: ATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCTTCTTTAAGGCCTTCTaGTGGCACCTGGGGCACACC +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSFFKAF*WHLGHT
Trigger: GGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAGAA...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCGTTGCAGCAGCTTCTaGTTCTCCTCTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSRCSSF*FSSSLT
Trigger: AGTCAAAGAAGAGGAGAAGCAGAAGCTGCTGCAACG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCATGCTGGTGCTCGTTCTaGAGCTCACTGCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSACWCSF*SSLPRC
Trigger: GCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCA...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGTCCTCCAGCTGCTGGTaGTCGTTCTGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGSSSCW*SFCSSL
Trigger: CAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGA...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTTCCCGCTCCTCCAGCTaGTGGTGCTCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFSRSSS*WCSFCS
Trigger: GCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGA...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAACTCCAGGCATTTCTaGACTGCTGACGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFNSRHF*TADASR
Trigger: GCGGCTGGCGTCAGCAGTGCAGAAATGCCTGGAGTT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTACCAGGGATGACTGGGTaGCCCTCTGGCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLPGMTG*PSGGPA
Trigger: TGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGG...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGTCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESSTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCAAACCTGCCAAATGCTaGCCCCCACAACAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSKPAKC*PPQQGC
Trigger: GCAACCCTGTTGTGGGGGGCAGCATTTGGCAGGTTT...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGGCAAGGGTGACAAGCTaGCACTGCCCACCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEARVTS*HCPPWM
Trigger: CATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGC...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAAGGTCGCCGTTCTGGTaGCGCGCGAGTTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLRSPFW*RASSTA
Trigger: CGCCGTGGAACTCGCGCGCCACCAGAACGGCGACCT...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGAACGGGGAGGCTGTCTaGAATCAGAGTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHANGEAV*NQSLWP
Trigger: AGGCCAAAGACTCTGATTCCAGACAGCCTCCCCGTT...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCACCACGGTGGCCTTCTaGAATGTTGGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFTTVAF*NVGGCL
Trigger: CAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCTGATGAGGAGGGGCTaGACTTTGATGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMLMRRG*TLMLSL
Trigger: CAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGGTCGTCATGGTGACCTaGAGCAGCTGCTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEVVMVT*SSCSPC
Trigger: ACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGAC...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCCTCGGGGTCAGTTGTaGCCCTGGGGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGPRGQL*PWGCWT
Trigger: CGTCCAGCACCCCCAGGGCCACAACTGACCCCGAGG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGACCTCCTAGGAGCGTaGGGCATTGAGGAACTACCT +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSDLLGA*GIEELP
Trigger: AGGTAGTTCCTCAATGCCCCACGCTCCTAGGAGGTC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGAAGGGCACAGGCTCTaGCGGGGATCACTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFEGHRL*RGSLQR
Trigger: ACGCTGCAGTGATCCCCGCCAGAGCCTGTGCCCTTC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGGATGCAGAAGCCCTTaGCAGCAAGTCTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAGCRSP*QQVWSP
Trigger: CGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTTGCCACTGCCCACCCTaGATGCAGAAGCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCACHCPP*MQKPLA
Trigger: TGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCA...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCCCAAAGCCCCGTGCTaGGTCCCTTGTGCACAGATG +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEPKAPC*VPCAQM
Trigger: CATCTGTGCACAAGGGACCCAGCACGGGGCTTTGGG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS-3UTR TCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGCGTGGAGCTGCTTCTTaGGGTCGCCGTTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESRGAAS*GRRSGG
Trigger: GCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACG...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR TCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGCCTTGGGCGCCGTCTTaGGGGGCGGCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAPWAPS*GAAPGS
Trigger: GCTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGG...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAACTTTCCGTGGGTATaGAGACTGGTCCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFNFPWV*RLVPRG
Trigger: ACCCCGAGGGACCAGTCTTCATACCCACGGAAAGTT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCCTTATCCTGTTGTGCTaGGTCCCTCAGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSLILLC*VPQDWD
Trigger: ATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAG...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLAAIRG*LSWSCF
Trigger: GAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGAGGCAGGGTTGGCTGTaGTTCTTCTCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGRQGWL*FFSSAP
Trigger: AGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCT...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGGTTGGCCCCTCGCTTaGAGGCGGCACAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVGWPLA*RRHSAH
Trigger: ATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTAACTCCAGGCATTTCTaGACTGCTGACGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCANSRHF*TADASR
Trigger: GCGGCTGGCGTCAGCAGTGCAGAAATGCCTGGAGTT...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAGCAAAGGCGACGGAGTaGCCCAGGCCCGCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIAKATE*PRPARP
Trigger: TGGGCGGGCGGGCCTGGGGCACTCCGTCGCCTTTGC...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACTCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDSGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAETAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTACCGGCCTCCTCGCTCTaGACCTCTGCGTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVPASSL*TSACVH
Trigger: ATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGG...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGGTGCTGGGTCCCTTGTaGACAGATGAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGVLGPL*TDERFC
Trigger: GCAGAACCTCTCATCTGTGCACAAGGGACCCAGCAC...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGTTGAGGTCGCCGTTCTaGTGGCGCGCGAGTTCCACG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESLRSPF*WRASST
Trigger: CGTGGAACTCGCGCGCCACCAGAACGGCGACCTCAA...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCGGGCGCTGGCACATaGCTGACAGTGTTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVPGAGT*LTVLLA
Trigger: CGCCAACAACACTGTCAGCCATGTGCCAGCGCCCGG...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGTTCTCGGGGTTCTCCTaGGTCGGGGGCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGFSGFS*VGGRSS
Trigger: GGAAGACCGGCCCCCGACCCAGGAGAACCCCGAGAA...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCCATAAGAGTGCACGATaGCCAGCATCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFHKSAR*PASQSR
Trigger: CCTGGACTGGGATGCTGGCCATCGTGCACTCTTATG...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGAAGGGCACAGGCTCTaGCGGGGATCACTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESEGHRL*RGSLQR
Trigger: ACGCTGCAGTGATCCCCGCCAGAGCCTGTGCCCTTC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGCGTGTCTGTGGTCGTaGCCGCGTGCGATGCACACA +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVACLWS*PRAMHT
Trigger: TGTGTGCATCGCACGCGGCCACGACCACAGACACGC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCATCCTCACTACCCACTaGACGGTCCTCCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFILTTH*TVLLGP
Trigger: TGGACCAAGGAGGACCGTCCAGTGGGTAGTGAGGAT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCGATTTGTTTGTCGCTaGGCGCGGCGATCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGRFVCR*ARRSAA
Trigger: AGCCGCGGATCGCCGCGCTCAGCGACAAACAAATCG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS-3UTR GCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCATGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTC +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPCLSWS*FLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCA...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAAGGCCACCCCCGCACTaGTCAGCGGAGAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASRPPPH*SAERRG
Trigger: CCCTCGCCTCTCCGCTGAGCAGTGCGGGGGTGGCCT...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTTTGCAGGCGGCACAGTaGTCATCGTGGGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFLQAAQ*SSWVIS
Trigger: CGAGATCACCCACGATGAGCACTGTGCCGCCTGCAA...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGGTTGGCCCCTCGCTTaGAGGCGGCACAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGGWPLA*RRHSAH
Trigger: ATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTAGCTCACTGCCTCGTTaGAGCAGCTTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCASSLPR*SSFCFS
Trigger: GGAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCT...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGAGCTCACTGCCTCGTTaGAGCAGCTTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAESSLPR*SSFCFS
Trigger: GGAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTCGTTCTGCAGCTCACTaGCTCGTTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCARSAAH*LVAAAS
Trigger: AGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACG...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTTGCTGGTGCTCGTTCTaGAGCTCACTGCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFCWCSF*SSLPRC
Trigger: GCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCA...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGTTTTGGCATAGTGTCTaGACTGGCAAGAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAFWHSV*TGKKGG
Trigger: TCCTCCCTTCTTGCCAGTGCAGACACTATGCCAAAA...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGTGACAAGCTGCCACTaGCCACCCTGGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFVTSCH*PPWMQK
Trigger: CTTCTGCATCCAGGGTGGGCAGTGGCAGCTTGTCAC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCCGGCCTCCTCGCTCTaGACCTCTGCGTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGPASSL*TSACVH
Trigger: ATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTATTGAGGTCGCCGTTCTaGTGGCGCGCGAGTTCCACG +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLLRSPF*WRASST
Trigger: CGTGGAACTCGCGCGCCACCAGAACGGCGACCTCAA...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAACGGGGAGGCTGTCTaGAATCAGAGTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFNGEAV*NQSLWP
Trigger: AGGCCAAAGACTCTGATTCCAGACAGCCTCCCCGTT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACTTCTCGGGGTTCTCCTaGGTCGGGGGCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDFSGFS*VGGRSS
Trigger: GGAAGACCGGCCCCCGACCCAGGAGAACCCCGAGAA...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCACGCTGTAGGCAGGGTTaGCTGTGCTTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPRCRQG*LCFFSS
Trigger: GGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCG...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCACAGTGCTCATCGTaGGTGATCTCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAAQCSS*VISFFQ
Trigger: CTGGAAGAACGAGATCACCCACGATGAGCACTGTGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGACTGGGTGCCCCTCTaGCGGGCCAGCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPDWVPL*RASRLV
Trigger: GACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGGGCCCGGCCAGCAGTaGGGCAGGGCTAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAGPGQQ*GRASGR
Trigger: ACGACCACTAGCCCTGCCCCACTGCTGGCCGGGCCC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACGGACGGTGGGGTGTGTaGCTGCCACTGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDGRWGV*LPLRAW
Trigger: CCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCC...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGCTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESLSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGGCAAGAAGGGAGGAGTaGAATACTTATCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLRDLPASSLCTSACVHAARREE*NTYRLF
Trigger: GAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGC...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGGAGCCCGTGGCTCCTaGACGCTTATCCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESGARGS*TLILLC
Trigger: GCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGTGCATGCGTGTCTGTaGTCGTGGCCGCGTGCGATG +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGVHACL*SWPRAM
Trigger: CATCGCACGCGGCCACGACCACAGACACGCATGCAC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGATCCTCACTACCCACTaGACGGTCCTCCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEILTTH*TVLLGP
Trigger: TGGACCAAGGAGGACCGTCCAGTGGGTAGTGAGGAT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGTCTTTGGCCTAACCTaGGGTAGCACTGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESVFGLT*GSTAAP
Trigger: AGGAGCGGCAGTGCTACCTCAGGTTAGGCCAAAGAC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAGCGGCTCCAGGCAGCTaGGGTGGTAGGCCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKAAPGS*GGRPPG
Trigger: GCCCGGGGGCCTACCACCTCAGCTGCCTGGAGCCGC...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCCTTGGGCGCCGTCTTaGGGGGCGGCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKPWAPS*GAAPGS
Trigger: GCTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAGTGTGTGGCTGCCACTaGGGGCTTGGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQVCGCH*GLGPGP
Trigger: GGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACAC...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFCPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTCTTATCCTGTTGTGCTaGGTCCCTCAGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCALILLC*VPQDWD
Trigger: ATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAG...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFTRDRH*SDRSQS
Trigger: GCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGT...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGTTGCAGGCGGCACAGTaGTCATCGTGGGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESLQAAQ*SSWVIS
Trigger: CGAGATCACCCACGATGAGCACTGTGCCGCCTGCAA...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCGACACCAATAGGCGGTaGCCTCAGTGGAGACTGCGT +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVDTNRR*PQWRLR
Trigger: ACGCAGTCTCCACTGAGGGCACCGCCTATTGGTGTC...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCCCCCACAACAGGGTTaGAGCTCCACTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGPPQQG*SSTLPR
Trigger: TCTGGGCAGAGTGGAGCTGCAACCCTGTTGTGGGGG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACCGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDRHHVI*SGWEPV
Trigger: CACGGGCTCCCACCCCGAGCATATCACATGGTGCCG...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGCACCTCTGCGTGTGTaGATGCGTGTCTGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVAPLRV*MRVCGR
Trigger: ACGACCACAGACACGCATGCACACACGCAGAGGTGC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCTCGCTCTGCACCTCTaGGTGTGTGCATGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVLALHL*VCACVS
Trigger: AGACACGCATGCACACACGCAGAGGTGCAGAGCGAG...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGAACGGGGAGGCTGTCTaGAATCAGAGTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAENGEAV*NQSLWP
Trigger: AGGCCAAAGACTCTGATTCCAGACAGCCTCCCCGTT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACGGCCTTCTGGAATGTTaGGGGCTGCTTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDGLLEC*GLLGWP
Trigger: CGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCC...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCTGATGAGGAGGGGCTaGACTTTGATGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAELMRRG*TLMLSL
Trigger: CAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGAGATGGCTCCTCTGTaGGCGGCCGCGACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASEMAPL*AAATLP
Trigger: CGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACCTTCTTCTTTTTGGTaGCCTGAGCTCCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAPSSFW*PELPEM
Trigger: CATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACTCCTGTCGCTTGCTCTaGATTTCTTCCAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: WSPKAGTSRATALSFLPNSCRLL*ISSKCS
Trigger: GGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGA...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGCACAGTGCTCATCGTaGGTGATCTCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPAQCSS*VISFFQ
Trigger: CTGGAAGAACGAGATCACCCACGATGAGCACTGTGC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGTCGTCATGGTGACCTaGAGCAGCTGCTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGVVMVT*SSCSPC
Trigger: ACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGAC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAGGGGGTGCTGGACGGTaGGGTGTGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIGGAGR*GVWLPL
Trigger: CAGTGGCAGCCACACACCCCACCGTCCAGCACCCCC...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATATGGCCCTGGGGGTGCTaGACGGTGGGGTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIWPWGC*TVGCVA
Trigger: AGCCACACACCCCACCGTCCAGCACCCCCAGGGCCA...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGCCAGAGGGAGGCCGTaGAGAGCAGGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAARGRP*RAGPGS
Trigger: GCTTCCAGGCCCTGCTCTCCACGGCCTCCCTCTGGC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCACPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMLQSLS*MIQPQG
Trigger: TCCTTGGGGTTGAATCATTCAACTTAACGACTGAAG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTACAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCCCCAACTCCTCAGGCTaGCCGGCAAGTTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPPNSSG*PASCAG
Trigger: CCCGGCGCAACTTGCCGGGCAGCCTGAGGAGTTGGG...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCGCCTCGGGCCGGCTCTaGAGCTCCATCCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFASGRL*SSIPAT
Trigger: AGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGC...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR GCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVCLSWS*FLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCA...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGTGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTC +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESCLSWS*FLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCA...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATATCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPISTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGGGCCCAGGTGGTTCTaGAAAGGCGACGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASGPRWF*KGDGVP
Trigger: GGGCACTCCGTCGCCTTTGCAGAACCACCTGGGCCC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTCTGGCGGGGATCACTaGAGCGTCCCGGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTSGGDH*SVPAPR
Trigger: TCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCAAACCTGCCAAATGCTaGCCCCCACAACAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVKPAKC*PPQQGC
Trigger: GCAACCCTGTTGTGGGGGGCAGCATTTGGCAGGTTT...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGTGACAAGCTGCCACTaGCCACCCTGGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGVTSCH*PPWMQK
Trigger: CTTCTGCATCCAGGGTGGGCAGTGGCAGCTTGTCAC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGCACACGCGTGTTCAGTaGAATTCGGCACCATGTGAT +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEHTRVQ*NSAPCD
Trigger: ATCACATGGTGCCGAATTGCACTGAACACGCGTGTG...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGCTCGCTCTGCACCTCTaGGTGTGTGCATGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGLALHL*VCACVS
Trigger: AGACACGCATGCACACACGCAGAGGTGCAGAGCGAG...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAGGCAGCTGCGGGATTTaGCGGCCTCCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIGSCGI*RPPRSA
Trigger: TGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACGAGCCGTGCAAGTTTaGAGGCCGGGGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASRAVQV*RPGCVC
Trigger: GCACACGCACCCCGGCCTGCAAACTTGCACGGCTCG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR CCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAGGAAGAGAGGAGGCGTaGAGGAGGCTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLGREEA*RRLVVS
Trigger: GCTGACAACAAGCCTCCTCCACGCCTCCTCTCTTCC...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCACCTTCTTCTTTTTGGTaGCCTGAGCTCCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPPSSFW*PELPEM
Trigger: CATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGG...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCGACTGGGTGCCCCTCTaGCGGGCCAGCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFDWVPL*RASRLV
Trigger: GACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTC...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTACGTGGGTATGAAGACTaGTCCCTCGGGGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVRGYED*SLGVSC
Trigger: ACAACTGACCCCGAGGGACCAGTCTTCATACCCACG...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGCAAGAAGGGAGGAGTaGAATACTTATCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFARREE*NTYRLF
Trigger: GAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACTGCCACTGCCCACCCTaGATGCAGAAGCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDCHCPP*MQKPLA
Trigger: TGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCA...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGAGGAAGCTGAAGACATaGACATCGCAAGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESRKLKT*TSQATR
Trigger: CCGCGTGGCTTGCGATGTCCATGTCTTCAGCTTCCT...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAAGGAAGCTGAAGACATaGACATCGCAAGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVRKLKT*TSQATR
Trigger: CCGCGTGGCTTGCGATGTCCATGTCTTCAGCTTCCT...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGCGCTGGCACATGGCTaGCAGTGTTGTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASALAHG*QCCWRW
Trigger: CCACCGCCAACAACACTGTCAGCCATGTGCCAGCGC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAGGAATCGGGCAAGGGTaGCAAGCTGCCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIGIGQG*QAATAH
Trigger: GTGGGCAGTGGCAGCTTGTCACCCTTGCCCGATTCC...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTACTTGGGCAGCACTTTaGGCTCACTTTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPTWAAL*AHFGPG
Trigger: GCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGT...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGTRDRH*SDRSQS
Trigger: GCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGT...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTGGAATGTTGGGGGCTaGTTGGGTGGCCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTWNVGG*LGGRSR
Trigger: CCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAAGGCCACCCCCGCACTaGTCAGCGGAGAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKRPPPH*SAERRG
Trigger: CCCTCGCCTCTCCGCTGAGCAGTGCGGGGGTGGCCT...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCACGTTGCAGCAGCTTCTaGTTCTCCTCTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPRCSSF*FSSSLT
Trigger: AGTCAAAGAAGAGGAGAAGCAGAAGCTGCTGCAACG...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCTTGTGGCCCTGGGGGTaGTGGACGGTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFLWPWG*WTVGCV
Trigger: CACACACCCCACCGTCCAGCACCCCCAGGGCCACAA...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGCAAGGGTGACAAGCTaGCACTGCCCACCCTGGATG +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPARVTS*HCPPWM
Trigger: CATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAGTGGTCGTGGCCGCGTaGGATGCACACACGCGTGTT +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIVVVAA*DAHTRV
Trigger: AACACGCGTGTGTGCATCGCACGCGGCCACGACCAC...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGGCAGCTGCGGGATTTaGCGGCCTCCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPGSCGI*RPPRSA
Trigger: TGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCAGGGACCGTGGCAGCTaGGGGATTTGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPRDRGS*GICRPP
Trigger: AGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCT...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTAGGGACCGTGGCAGCTaGGGGATTTGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTRDRGS*GICRPP
Trigger: AGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCT...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCAATATAGAAGACGTGTaGCTCACACGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSNIEDV*LTRFTL
Trigger: CAAAGTGAACCGTGTGAGGCACACGTCTTCTATATT...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGAGGTCGCCGTTCTGGTaGCGCGCGAGTTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKRSPFW*RASSTA
Trigger: CGCCGTGGAACTCGCGCGCCACCAGAACGGCGACCT...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAATGTTGGGGGCTGCTTaGGTGGCCGGTCCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKMLGAA*VAGPGP
Trigger: CGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACAT...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGGCCTTCTGGAATGTTaGGGGCTGCTTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAGLLEC*GLLGWP
Trigger: CGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACCGGGCGCTGGCACATaGCTGACAGTGTTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASPGAGT*LTVLLA
Trigger: CGCCAACAACACTGTCAGCCATGTGCCAGCGCCCGG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACTGGCTGCCGGGCGCTaGCACATGGCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASLAAGR*HMADSV
Trigger: AACACTGTCAGCCATGTGCCAGCGCCCGGCAGCCAG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCTTCTCGGGGTTCTCCTaGGTCGGGGGCCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPFSGFS*VGGRSS
Trigger: GGAAGACCGGCCCCCGACCCAGGAGAACCCCGAGAA...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTCCTTCTGCTGGCACCTaGGGCACACCCACACGCCCT +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTPSAGT*GTPTRP
Trigger: AGGGCGTGTGGGTGTGCCCCAGGTGCCAGCAGAAGG...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTCTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPLSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAGTGGAGACTGCGTTCTaGGGGGCGTGCTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQVETAF*GACLSP
Trigger: AGGGGACAAGCACGCCCCCCAGAACGCAGTCTCCAC...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGAAGGGCACAGGCTCTaGCGGGGATCACTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAEGHRL*RGSLQR
Trigger: ACGCTGCAGTGATCCCCGCCAGAGCCTGTGCCCTTC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGCAAGAAGGGAGGAGTaGAATACTTATCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VICSGWEPVAPGRLSCCAARREE*NTYRLF
Trigger: GAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGC...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAACCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGAGGTCGCCGTTCTGTaGCTGCCGCCTCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKEVAVL*LPPHRG
Trigger: GCCCCGATGAGGCGGCAGCCACAGAACGGCGACCTC...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR TCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCAAGCTTGTTTGTCGCTaGGCGCGGCGATCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFKLVCR*ARRSAA
Trigger: AGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAATGCAAGGAGCTGACCTaGGGACCCGTGACAGGCACT +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQCKELT*GPVTGT
Trigger: AGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCA...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGTCTTTGGCCTAACCTaGGGTAGCACTGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPVFGLT*GSTAAP
Trigger: AGGAGCGGCAGTGCTACCTCAGGTTAGGCCAAAGAC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGGCCTAGCGCTACCATaGAGGCGATTTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPGLALP*RRFSRG
Trigger: ACCCCGAGAAAATCGCCTTCATGGTAGCGCTAGGCC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACAGTGCTCATCGTGGGTaGTCTCGTTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDSAHRG*SRSSSR
Trigger: CCTGCTGGAAGAACGAGATCACCCACGATGAGCACT...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGGAATCGGGCAAGGGTaGCAAGCTGCCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPGIGQG*QAATAH
Trigger: GTGGGCAGTGGCAGCTTGTCACCCTTGCCCGATTCC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAACGTGGAGCTGCTTCTTaGGGTCGCCGTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQRGAAS*GRRSVA
Trigger: AGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACG...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR TCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACGTGGAGCTGCTTCTTaGGGTCGCCGTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASRGAAS*GRRSVA
Trigger: AGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTGGGCAGCACTTTaGGCTCACTTTGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPITWAAL*AHFGPG
Trigger: GCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGT...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR GCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACAGCTCACTGCCTCGTTaGAGCAGCTTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDSSLPR*SSFCFS
Trigger: GGAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCT...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGTTGTGGCCCTGGGGGTaGTGGACGGTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKLWPWG*WTVGCV
Trigger: CACACACCCCACCGTCCAGCACCCCCAGGGCCACAA...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGTCCACAGCCTCAGCCTaGCCCTCCAACGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKSTASA*PSNGPE
Trigger: CTCTGGCCCGTTGGAGGGGCAGGCTGAGGCTGTGGA...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACCCCCACAACAGGGTTaGAGCTCCACTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASPPQQG*SSTLPR
Trigger: TCTGGGCAGAGTGGAGCTGCAACCCTGTTGTGGGGG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGTGACAAGCTGCCACTaGCCACCCTGGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPVTSCH*PPWMQK
Trigger: CTTCTGCATCCAGGGTGGGCAGTGGCAGCTTGTCAC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCCGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPRHHVI*SGWEPV
Trigger: CACGGGCTCCCACCCCGAGCATATCACATGGTGCCG...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTCGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTRHHVI*SGWEPV
Trigger: CACGGGCTCCCACCCCGAGCATATCACATGGTGCCG...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGCACACGCGTGTTCAGTaGAATTCGGCACCATGTGAT +
Preference number: 4 (lower is better)
Translates to: PGRLSCCAESLRTGMWESHTRVQ*NSAPCD
Trigger: ATCACATGGTGCCGAATTGCACTGAACACGCGTGTG...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCCGTGGCCGCGTGCGATaGACACACGCGTGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFRGRVR*THACSV
Trigger: CACTGAACACGCGTGTGTGCATCGCACGCGGCCACG...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCGTGGTCGTGGCCGCGTaGGATGCACACACGCGTGTT +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFVVVAA*DAHTRV
Trigger: AACACGCGTGTGTGCATCGCACGCGGCCACGACCAC...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTACCACGGTGGCCTTCTaGAATGTTGGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPTTVAF*NVGGCL
Trigger: CAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGT...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTCCGGGCGCTGGCACATaGCTGACAGTGTTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTPGAGT*LTVLLA
Trigger: CGCCAACAACACTGTCAGCCATGTGCCAGCGCCCGG...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCATCCTGTCGCTTGCTCTaGATTTCTTCCAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPSCRLL*ISSKCS
Trigger: GGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGA...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACCGCTGTAGGCAGGGTTaGCTGTGCTTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDRCRQG*LCFFSS
Trigger: GGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCG...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAGCACAGTGCTCATCGTaGGTGATCTCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLAQCSS*VISFFQ
Trigger: CTGGAAGAACGAGATCACCCACGATGAGCACTGTGC...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACCATAAGAGTGCACGATaGCCAGCATCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDHKSAR*PASQSR
Trigger: CCTGGACTGGGATGCTGGCCATCGTGCACTCTTATG...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAGACTGGGTGCCCCTCTaGCGGGCCAGCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKDWVPL*RASRLV
Trigger: GACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTC...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGTCGTCATGGTGACCTaGAGCAGCTGCTCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAVVMVT*SSCSPC
Trigger: ACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGAC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAGGGGGTGCTGGACGGTaGGGTGTGTGGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKGGAGR*GVWLPL
Trigger: CAGTGGCAGCCACACACCCCACCGTCCAGCACCCCC...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAACCTCGGGGTCAGTTGTaGCCCTGGGGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKPRGQL*PWGCWT
Trigger: CGTCCAGCACCCCCAGGGCCACAACTGACCCCGAGG...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAACTGTCGTACCCCACCTaGCTCCTAGGTACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQLSYPT*LLGTPC
Trigger: ACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAG...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGGATGCAGAAGCCCTTaGCAGCAAGTCTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAGCRSP*QQVWSP
Trigger: CGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCATGCCACTGCCCACCCTaGATGCAGAAGCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASCHCPP*MQKPLA
Trigger: TGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCA...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCGTGCATGCGTGTCTGTaGTCGTGGCCGCGTGCGATG +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFVHACL*SWPRAM
Trigger: CATCGCACGCGGCCACGACCACAGACACGCATGCAC...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCAGCGGTAATGCATACTTaGCACAGAGTAGCCAATATA +
Preference number: 4 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAAVMHT*HRVANI
Trigger: TATATTGGCTACTCTGTGCCAAGTATGCATTACCGC...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGAAGCTTGTTTGTCGCTaGGCGCGGCGATCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKKLVCR*ARRSAA
Trigger: AGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTT...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAGGAACAGGGGGTTGTTaGGATAGTTGGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQGTGGC*DSWRPA
Trigger: GGCTGGCCTCCAACTATCTCAACAACCCCCTGTTCC...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCGCATCAACGGCAAACTaGGTCCAAGAGATTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVASTAN*VQEIGK
Trigger: TTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGC...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGGAATCGGGCAAGGGTaGCAAGCTGCCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKGIGQG*QAATAH
Trigger: GTGGGCAGTGGCAGCTTGTCACCCTTGCCCGATTCC...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAACAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGAGCACTGCCGCTCCTTaGCCGGCCAACCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKSTAAP*PANLCK
Trigger: CTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTAGGCAGGGTTGGCTGTaGTTCTTCTCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPRQGWL*FFSSAP
Trigger: AGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCT...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCGTTGCAGCAGCTTCTaGTTCTCCTCTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVRCSSF*FSSSLT
Trigger: AGTCAAAGAAGAGGAGAAGCAGAAGCTGCTGCAACG...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTCGTTCTGCAGCTCACTaGCTCGTTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPRSAAH*LVAAAS
Trigger: AGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACG...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAAACTCCAGGCATTTCTaGACTGCTGACGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQNSRHF*TADASR
Trigger: GCGGCTGGCGTCAGCAGTGCAGAAATGCCTGGAGTT...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGACACCAATAGGCGGTaGCCTCAGTGGAGACTGCGT +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKADTNRR*PQWRLR
Trigger: ACGCAGTCTCCACTGAGGGCACCGCCTATTGGTGTC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAGACACCAATAGGCGGTaGCCTCAGTGGAGACTGCGT +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQDTNRR*PQWRLR
Trigger: ACGCAGTCTCCACTGAGGGCACCGCCTATTGGTGTC...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKATAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGCAAGGGTGACAAGCTaGCACTGCCCACCCTGGATG +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPARVTS*HCPPWM
Trigger: CATCCAGGGTGGGCAGTGGCAGCTTGTCACCCTTGC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAGGCAGCTGCGGGATTTaGCGGCCTCCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKGSCGI*RPPRSA
Trigger: TGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGAATATAGAAGACGTGTaGCTCACACGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAENIEDV*LTRFTL
Trigger: CAAAGTGAACCGTGTGAGGCACACGTCTTCTATATT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCACTTTGCGCTCACTTTaGCCCGGGCTCCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFTLRSL*PGLPGS
Trigger: ACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFRGCLS*SCFLRS
Trigger: CGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCG...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAACCACGGTGGCCTTCTaGAATGTTGGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASTTVAF*NVGGCL
Trigger: CAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGT...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCCGGGCGCTGGCACATaGCTGACAGTGTTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKPGAGT*LTVLLA
Trigger: CGCCAACAACACTGTCAGCCATGTGCCAGCGCCCGG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTACCTGGAAGATGCCATaGAGGGGTGAAGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPTWKMP*RGEGDS
Trigger: ACTGTCCCCTTCACCCCTCCATGGCATCTTCCAGGT...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTCGCTGTAGGCAGGGTTaGCTGTGCTTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPRCRQG*LCFFSS
Trigger: GGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCG...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAACCTTCTGCTGGCACCTaGGGCACACCCACACGCCCT +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKPSAGT*GTPTRP
Trigger: AGGGCGTGTGGGTGTGCCCCAGGTGCCAGCAGAAGG...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATATTTAAGGCCTTCTGCTaGCACCTGGGGCACACCCAC +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIFKAFC*HLGHTH
Trigger: GTGGGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAA...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGACCTCCTAGGAGCGTaGGGCATTGAGGAACTACCT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPDLLGA*GIEELP
Trigger: AGGTAGTTCCTCAATGCCCCACGCTCCTAGGAGGTC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAAGAAAGGGGCCCAGGTaGTTCTGCAAAGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIRKGPR*FCKGDG
Trigger: TCCGTCGCCTTTGCAGAACCACCTGGGCCCCTTTCT...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCCTTGGCAGCAAGTCTaGTCCCCGAAGGCCGGAACC +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKPWQQV*SPKAGT
Trigger: GGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCTGCCACTGCCCACCCTaGATGCAGAAGCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPCHCPP*MQKPLA
Trigger: TGCCAAGGGCTTCTGCATCCAGGGTGGGCAGTGGCA...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAAAGCTTGTTTGTCGCTaGGCGCGGCGATCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKKLVCR*ARRSAA
Trigger: AGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTT...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR TCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGGCCTAGCGCTACCATaGAGGCGATTTTCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPGLALP*RRFSRG
Trigger: ACCCCGAGAAAATCGCCTTCATGGTAGCGCTAGGCC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGAGTGCTCATCGTGGGTaGTCTCGTTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKASAHRG*SRSSSR
Trigger: CCTGCTGGAAGAACGAGATCACCCACGATGAGCACT...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAAACTTTCCGTGGGTATaGAGACTGGTCCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQNFPWV*RLVPRG
Trigger: ACCCCGAGGGACCAGTCTTCATACCCACGGAAAGTT...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCCAATTCGGCACCATGTaGTATGCTCGGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPQFGTM*YARGGS
Trigger: GCTCCCACCCCGAGCATATCACATGGTGCCGAATTG...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAAACAGAAAAGGAAGCTaGAGACATGGACATCGCAAG +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVNRKGS*RHGHRK
Trigger: CTTGCGATGTCCATGTCTTCAGCTTCCTTTTCTGTT...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPITRDRH*SDRSQS
Trigger: GCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGT...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASTRDRH*SDRSQS
Trigger: GCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGT...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAAGCACTGCCGCTCCTTaGCCGGCCAACCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKSTAAP*PANLCK
Trigger: CTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAAGGCAGGGTTGGCTGTaGTTCTTCTCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIRQGWL*FFSSAP
Trigger: AGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCT...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACAGGCCCCCGGGCAGGTaGCGCAGGGCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNRPPGR*RRAAGW
Trigger: CCAACCTGCAGCCCTGCGGCACCTGCCCGGGGGCCT...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAAGCTCACTGCCTCGTTaGAGCAGCTTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPISSLPR*SSFCFS
Trigger: GGAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCT...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACGTTCTGCAGCTCACTaGCTCGTTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASRSAAH*LVAAAS
Trigger: AGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTGCTGGTGCTCGTTCTaGAGCTCACTGCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTCWCSF*SSLPRC
Trigger: GCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAGTCCCGGCGCCCAGATaGTCACCTCCGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKVPAPR*SPPTVS
Trigger: AGACACTGTCGGAGGTGAGCATCTGGGCGCCGGGAC...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCCCCCACAACAGGGTTaGAGCTCCACTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKPPQQG*SSTLPR
Trigger: TCTGGGCAGAGTGGAGCTGCAACCCTGTTGTGGGGG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGTTTTGGCATAGTGTCTaGACTGGCAAGAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGFWHSV*TGKKGG
Trigger: TCCTCCCTTCTTGCCAGTGCAGACACTATGCCAAAA...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAACGGCACCATGTGATATaGTCGGGGTGGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKRHHVI*SGWEPV
Trigger: CACGGGCTCCCACCCCGAGCATATCACATGGTGCCG...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTAATATAGAAGACGTGTaGCTCACACGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFNIEDV*LTRFTL
Trigger: CAAAGTGAACCGTGTGAGGCACACGTCTTCTATATT...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACACAGATGAGAGGTTCTaGCCGCGATTTGTTTGTCGC +
Preference number: 4 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDTDERF*PRFVCR
Trigger: GCGACAAACAAATCGCGGGCAGAACCTCTCATCTGT...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTCCATCCCGGCAACTTaGGCAGCACTTTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTSIPAT*AALCAH
Trigger: GTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTACCACGGTGGCCTTCTaGAATGTTGGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTTTVAF*NVGGCL
Trigger: CAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGT...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACCGGTGCTGGGGGCCATaGCGGCGGCATTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNRCWGP*RRHCWG
Trigger: CCCCCAGCAATGCCGCCGCCATGGCCCCCAGCACCG...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGCGCTGTAGGCAGGGTTaGCTGTGCTTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKARCRQG*LCFFSS
Trigger: GGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCG...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTTAAGGCCTTCTGCTaGCACCTGGGGCACACCCAC +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTFKAFC*HLGHTH
Trigger: GTGGGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATACATAAGAGTGCACGATaGCCAGCATCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIHKSAR*PASQSR
Trigger: CCTGGACTGGGATGCTGGCCATCGTGCACTCTTATG...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATACGTGGGTATGAAGACTaGTCCCTCGGGGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIRGYED*SLGVSC
Trigger: ACAACTGACCCCGAGGGACCAGTCTTCATACCCACG...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACGTGGGTATGAAGACTaGTCCCTCGGGGTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASRGYED*SLGVSC
Trigger: ACAACTGACCCCGAGGGACCAGTCTTCATACCCACG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGGAGCCCGTGGCTCCTaGACGCTTATCCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKGARGS*TLILLC
Trigger: GCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCC...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTACTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVLQSLS*MIQPQG
Trigger: TCCTTGGGGTTGAATCATTCAACTTAACGACTGAAG...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCACTTATCCTGTTGTGCTaGGTCCCTCAGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASLILLC*VPQDWD
Trigger: ATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAG...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCTCCCTTGTGCACAGATaGGAGGTTCTGCCCGCGATT +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFSLVHR*EVLPAI
Trigger: AATCGCGGGCAGAACCTCTCATCTGTGCACAAGGGA...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS-3UTR GCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGGCCTCGGCAAAGTTGTaGCTCGGCACGATGCTAATT +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKAASAKL*LGTMLI
Trigger: AATTAGCATCGTGCCGAGGCACAACTTTGCCGAGGC...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCTGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTC +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFCLSWS*FLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCA...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTCTTTAAGGCCTTCTaGTGGCACCTGGGGCACACC +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTFFKAF*WHLGHT
Trigger: GGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAGAA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAACTTTGCGCTCACTTTaGCCCGGGCTCCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKTLRSL*PGLPGS
Trigger: ACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGT...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAAACGGGGAGGCTGTCTaGAATCAGAGTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASNGEAV*NQSLWP
Trigger: AGGCCAAAGACTCTGATTCCAGACAGCCTCCCCGTT...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCGCTGATGAGGAGGGGCTaGACTTTGATGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: FVTLIILTERGPGGSAKALMRRG*TLMLSL
Trigger: CAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAG...CGCCTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAACTGATGAGGAGGGGCTaGACTTTGATGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQLMRRG*TLMLSL
Trigger: CAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAG...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGCACAGTGCTCATCGTaGGTGATCTCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASAQCSS*VISFFQ
Trigger: CTGGAAGAACGAGATCACCCACGATGAGCACTGTGC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGGGCCCGGCCAGCAGTaGGGCAGGGCTAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNGPGQQ*GRASGR
Trigger: ACGACCACTAGCCCTGCCCCACTGCTGGCCGGGCCC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGACCTCCTAGGAGCGTaGGGCATTGAGGAACTACCT +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPDLLGA*GIEELP
Trigger: AGGTAGTTCCTCAATGCCCCACGCTCCTAGGAGGTC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCAGGAAGCTGAAGACATaGACATCGCAAGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFRKLKT*TSQATR
Trigger: CCGCGTGGCTTGCGATGTCCATGTCTTCAGCTTCCT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCATCCTCACTACCCACTaGACGGTCCTCCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFILTTH*TVLLGP
Trigger: TGGACCAAGGAGGACCGTCCAGTGGGTAGTGAGGAT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTTCCGCTCCTGTCGCTTaGTCTGGATTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPSAPVA*SGFLPN
Trigger: ATTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGA...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATTGCAGGCGGCACAGTaGTCATCGTGGGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKLQAAQ*SSWVIS
Trigger: CGAGATCACCCACGATGAGCACTGTGCCGCCTGCAA...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCGTTCTGCAGCTCACTaGCTCGTTGCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKRSAAH*LVAAAS
Trigger: AGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGGTGCTCGTTCTaGAGCTCACTGCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKCWCSF*SSLPRC
Trigger: GCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCA...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATCCTCCAGCTGCTGGTaGTCGTTCTGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKSSSCW*SFCSSL
Trigger: CAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGA...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAACTGCCCACCCTGGATaGAGAAGCCCTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKTAHPG*RSPWQQ
Trigger: TTGCTGCCAAGGGCTTCTGCATCCAGGGTGGGCAGT...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATACACACGCGTGTTCAGTaGAATTCGGCACCATGTGAT +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIHTRVQ*NSAPCD
Trigger: ATCACATGGTGCCGAATTGCACTGAACACGCGTGTG...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAACCTTCTTCTTTTTGGTaGCCTGAGCTCCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQPSSFW*PELPEM
Trigger: CATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGG...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACCCTCGGGGTCAGTTGTaGCCCTGGGGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNPRGQL*PWGCWT
Trigger: CGTCCAGCACCCCCAGGGCCACAACTGACCCCGAGG...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
3UTR CAA 72 bp AGACATGGACATCGCAAGCCACGCGGTAATGCATACTaGGCACAGAGTAGCCAATATAGAAGACGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RHGHRKPRGNAY*AQSSQYRRRVP
Trigger: AGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATGCATTACCGCGTGGCTTGCGATGTCCATGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAGCATCAACGGCAAACTaGGTCCAAGAGATTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQASTAN*VQEIGK
Trigger: TTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGC...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPCPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTAACAGAAAAGGAAGCTaGAGACATGGACATCGCAAG +
Preference number: 4 (lower is better)
Translates to: THQRQTESKRLAKGRRQPNRKGS*RHGHRK
Trigger: CTTGCGATGTCCATGTCTTCAGCTTCCTTTTCTGTT...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCATCCGCTCCTGTCGCTTaGTCTGGATTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASSAPVA*SGFLPN
Trigger: ATTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGA...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATTCTTTAAGGCCTTCTaGTGGCACCTGGGGCACACC +
Preference number: 4 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKFFKAF*WHLGHT
Trigger: GGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAGAA...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGTGCCCAGAAACTCCATaGGAAAAACGCATCAACGGC +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKCPETP*EKRING
Trigger: GCCGTTGATGCGTTTTTCTCATGGAGTTTCTGGGCA...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAAACAGAAAAGGAAGCTaGAGACATGGACATCGCAAG +
Preference number: 4 (lower is better)
Translates to: VYELRPTEPPGCVSRVPINRKGS*RHGHRK
Trigger: CTTGCGATGTCCATGTCTTCAGCTTCCTTTTCTGTT...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCTCCGCTCCTGTCGCTTaGTCTGGATTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFSAPVA*SGFLPN
Trigger: ATTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGA...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCTCCGCTCCTGTCGCTTaGTCTGGATTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPSAPVA*SGFLPN
Trigger: ATTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGA...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGTGGTCGTGGCCGCGTaGGATGCACACACGCGTGTT +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNVVVAA*DAHTRV
Trigger: AACACGCGTGTGTGCATCGCACGCGGCCACGACCAC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAATCCTGTCGCTTGCTCTaGATTTCTTCCAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: ALARREEWNTYRLFQRRQSCRLL*ISSKCS
Trigger: GGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGA...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCGTTGCAGCAGCTTCTaGTTCTCCTCTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKRCSSF*FSSSLT
Trigger: AGTCAAAGAAGAGGAGAAGCAGAAGCTGCTGCAACG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAAATATAGAAGACGTGTaGCTCACACGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASNIEDV*LTRFTL
Trigger: CAAAGTGAACCGTGTGAGGCACACGTCTTCTATATT...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGGATGCAGAAGCCCTTaGCAGCAAGTCTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNGCRSP*QQVWSP
Trigger: CGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGCGGTAATGCATACTTaGCACAGAGTAGCCAATATA +
Preference number: 4 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASAVMHT*HRVANI
Trigger: TATATTGGCTACTCTGTGCCAAGTATGCATTACCGC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTCTTCAGTCGTTAAGTTaGATGATTCAACCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTLQSLS*MIQPQG
Trigger: TCCTTGGGGTTGAATCATTCAACTTAACGACTGAAG...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGAACAGAAAAGGAAGCTaGAGACATGGACATCGCAAG +
Preference number: 4 (lower is better)
Translates to: QFVTLIILTERGPGGSAKNRKGS*RHGHRK
Trigger: CTTGCGATGTCCATGTCTTCAGCTTCCTTTTCTGTT...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACTCCTCCAGCTGCTGGTaGTCGTTCTGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNSSSCW*SFCSSL
Trigger: CAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGA...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR GCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGCACCTCTGCGTGTGTaGATGCGTGTCTGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNAPLRV*MRVCGR
Trigger: ACGACCACAGACACGCATGCACACACGCAGAGGTGC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGCGGTAATGCATACTTaGCACAGAGTAGCCAATATA +
Preference number: 4 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPAVMHT*HRVANI
Trigger: TATATTGGCTACTCTGTGCCAAGTATGCATTACCGC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR TCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACAGTGCTCATCGTGGGTaGTCTCGTTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNSAHRG*SRSSSR
Trigger: CCTGCTGGAAGAACGAGATCACCCACGATGAGCACT...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACTCCTGTCGCTTGCTCTaGATTTCTTCCAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNSCRLL*ISSKCS
Trigger: GGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGA...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CCA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGCGGTAATGCATACTTaGCACAGAGTAGCCAATATA +
Preference number: 4 (lower is better)
Translates to: ITLLKHVTQSIREENQTNAVMHT*HRVANI
Trigger: TATATTGGCTACTCTGTGCCAAGTATGCATTACCGC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp TTGGGCAGCACTTTGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTTaGGCGGCTCCGCGGGGGCCAGAGCGGGCGCGGGCGGACGCGGCC +
Preference number: 5 (lower is better)
Translates to: LGSTLRSLWPGLPGS*AAPRGPERARADAA
Trigger: GGCCGCGTCCGCCCGCGCCCGCTCTGGCCCCCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS GCA 90 bp AAGGGGAAGACAGGCTTCCGGGCGCCGCGGCGCCGAGCCCTCGGCTaGCCCAACTCCTCAGGCTGCCCGGCAAGTTGCGCCGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: KGKTGFRAPRRRALG*PNSSGCPASCAGSP
Trigger: CGGGGACCCGGCGCAACTTGCCGGGCAGCCTGAGGAGTTGGGGCAGCCGAGGGCTCGGCGCCGCGGCGCCCGGAAGCCTGTCTTCCCCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CAA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCCCTTGGGCGCCGTCTaGAGGGGCGGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSPLGAV*RGGSRQ
Trigger: CTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGGG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGCTGCCACTGAGGGCTaGGTCCAGGGCCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSAATEG*VQGPAS
Trigger: GCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp TCGGGCCGGCTCTGCAGCTCCATCCCGGCAACTTGGGCAGCACTTTaGGCTCACTTTGGCCCGGGCTCCCGGGAAGTTGCGCGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SGRLCSSIPATWAAL*AHFGPGSREVARLR
Trigger: GCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CCA 90 bp CTGCAGCTCCATCCCGGCAACTTGGGCAGCACTTTGCGCTCACTTTaGCCCGGGCTCCCGGGAAGTTGCGCGGCTCCGCGGGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LQLHPGNLGSTLRSL*PGLPGSCAAPRGPE
Trigger: CTCTGGCCCCCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCCCCTTGGGCGCCGTCTaGAGGGGCGGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RENDRRDRGSCGICRPPRPLGAV*RGGSRQ
Trigger: CTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGGG...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCCCTTGGGCGCCGTCTaGAGGGGCGGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: WSPKAGTSRATALSFLPNPLGAV*RGGSRQ
Trigger: CTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGGG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCCCTTGGGCGCCGTCTaGAGGGGCGGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMPLGAV*RGGSRQ
Trigger: CTGCCTGGAGCCGCCCCTCAAGACGGCGCCCAAGGG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGCCGGATCTTCCAGCTaGGCCAGGCTTCCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSAGSSS*ARLPEG
Trigger: CCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 90 bp ACGGCGAGCGCCTCGGGCCGGCTCTGCAGCTCCATCCCGGCAACTTaGGCAGCACTTTGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: TASASGRLCSSIPAT*AALCAHFGPGSREV
Trigger: AACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGCGCTCGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000491522.1
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACAATGTTGGGGGCTGCTaGGGTGGCCGGTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: WSPKAGTSRATALSFLPNNVGGC*GGRSRP
Trigger: GGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATT...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCACACCCACACGCCCTaGGGCGCCGTCTTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMHTHTP*GAVLRG
Trigger: GCCCCTCAAGACGGCGCCCAAGGGCGTGTGGGTGTG...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 90 bp CTGGAGACAGACCCCTCTGGGAGTCTGAGCGTGCGTCGCCCAGGCTaGCACTTTTTAGGGCGCCGCCAAAGTGCCCAGCCACCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LETDPSGSLSVRRPG*HFLGRRQSAQPPSR
Trigger: GCGGGAGGGTGGCTGGGCACTTTGGCGGCGCCCTAAAAAGTGCCAGCCTGGGCGACGCACGCTCAGACTCCCAGAGGGGTCTGTCTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491522.1
CDS-3UTR CAA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCGCGCCTGGATCTCGTaGGGCCTCGGCAAAGTTGTG +
Preference number: 5 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSRAWIS*GLGKVV
Trigger: CACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CAA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCGCTGGGCTGGGGTTCTaGACGCTGACCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RENDRRDRGSCGICRPPRAGLGF*TLTTVA
Trigger: GGCCACCGTGGTCAGCGTCAAGAACCCCAGCCCAGC...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GGCAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGGCTGGGCTGGGGTTCTaGACGCTGACCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GSCGICRPPRSAPLRVCMAGLGF*TLTTVA
Trigger: GGCCACCGTGGTCAGCGTCAAGAACCCCAGCCCAGC...CATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCCACACCCACACGCCCTaGGGCGCCGTCTTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSHTHTP*GAVLRG
Trigger: GCCCCTCAAGACGGCGCCCAAGGGCGTGTGGGTGTG...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CAGCTGCGGGATTTGCCGGCCTCCTCGCTCTGCACCTCTGCGTGTGTGCATGCGTGGCAGCTGCGGGATTaGCCGGCCTCCTCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: QLRDLPASSLCTSACVHAWQLRD*PASSLC
Trigger: GCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCA...CGCATGCACACACGCAGAGGTGCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCGGTTCTGCCCGCGATTaGTTTGTCGCTGAGCGCGGC +
Preference number: 5 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSGSARD*FVAERG
Trigger: GCCGCGCTCAGCGACAAACAAATCGCGGGCAGAACC...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS TCA 90 bp CTCGCCCTGTATCAGTCTCAGGAGGGCCCGCAGGCGGTCCAGGGATaGCTGGGTGCCCCTCTGGCGGGCCAGCAGGCTTGTCTTCAACTC +
Preference number: 5 (lower is better)
Translates to: LALYQSQEGPQAVQG*LGAPLAGQQACLQL
Trigger: GAGTTGAAGACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTGCGGGCCCTCCTGAGACTGATACAGGGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp TTCTGGTGGCGCGCGAGTTCCACGGCGAGCGCCTCGGGCCGGCTCTaGAGCTCCATCCCGGCAACTTGGGCAGCACTTTGCGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: FWWRASSTASASGRL*SSIPATWAALCAHF
Trigger: AAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGCGCTCGCCGTGGAACTCGCGCGCCACCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000474327.5
ENST00000491522.1
ENST00000629843.2
CDS GCA 90 bp AGCAGTGGGGCAGGGCTAGTGGTCGTCATGGTGACCTGGAGCAGCTaGTCGCCCTGTATCAGTCTCAGGAGGGCCCGCAGGCGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSGAGLVVVMVTWSS*SPCISLRRARRRSR
Trigger: CCTGGACCGCCTGCGGGCCCTCCTGAGACTGATACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGACCACTAGCCCTGCCCCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 90 bp GAGCCTCCCGCGGGCAGGGACTATATTTCCTCCGGCGCGCGCGCCTaGATCTCGTTGGGCCTCGGCAAAGTTGTGCCTCGGCACGATGCT +
Preference number: 5 (lower is better)
Translates to: EPPAGRDYISSGARA*ISLGLGKVVPRHDA
Trigger: AGCATCGTGCCGAGGCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGTCCCTGCCCGCGGGAGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS CCA 90 bp CCCTGTATCAGTCTCAGGAGGGCCCGCAGGCGGTCCAGGGATGACTaGGTGCCCCTCTGGCGGGCCAGCAGGCTTGTCTTCAACTCCAGG +
Preference number: 5 (lower is better)
Translates to: PCISLRRARRRSRDD*VPLWRASRLVFNSR
Trigger: CCTGGAGTTGAAGACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTGCGGGCCCTCCTGAGACTGATACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGCACACCCACACGCCCTaGGGCGCCGTCTTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGHTHTP*GAVLRG
Trigger: GCCCCTCAAGACGGCGCCCAAGGGCGTGTGGGTGTG...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 90 bp TTCTGCACTGCTGACGCCAGCCGCCGGTCCCGCTCCTCCAGCTGCTaGTGCTCGTTCTGCAGCTCACTGCCTCGTTGCAGCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FCTADASRRSRSSSC*CSFCSSLPRCSSFC
Trigger: GCAGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGACCGGCGGCTGGCGTCAGCAGTGCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGAATGTTGGGGGCTGCTaGGGTGGCCGGTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAENVGGC*GGRSRP
Trigger: GGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGCCGAGCCGTGCAAGTTaGCAGGCCGGGGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGPSRAS*QAGVRV
Trigger: CACACGCACCCCGGCCTGCAAACTTGCACGGCTCGG...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS TCA 90 bp AGCACTGCCGCTCCTTGCCCGGCCAACCTCTGCAAGGAGCTGACCTaGGGACCCGTGACAGGCACTGCAGTGATCGTTCCCAAAGCCCCG +
Preference number: 5 (lower is better)
Translates to: STAAPCPANLCKELT*GPVTGTAVIVPKAP
Trigger: CGGGGCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403565.5
ENST00000474327.5
CDS GCA 90 bp GGCCTGAGCTCCCTGAGATGGCTCCTCTGTGGGCGGCCGCGACTCTaGCGTGCTCTCGGGCTGCGTCTGCACTTGAGGCTGAATGATGAT +
Preference number: 5 (lower is better)
Translates to: GLSSLRWLLCGRPRL*RALGLRLHLRLNDD
Trigger: ATCATCATTCAGCCTCAAGTGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTCAGGGAGCTCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS GCA 90 bp CATTTCTGCACTGCTGACGCCAGCCGCCGGTCCCGCTCCTCCAGCTaGTGGTGCTCGTTCTGCAGCTCACTGCCTCGTTGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: HFCTADASRRSRSSS*WCSFCSSLPRCSSF
Trigger: GAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp GTATCAGTCTCAGGAGGGCCCGCAGGCGGTCCAGGGATGACTGGGTaGCCCTCTGGCGGGCCAGCAGGCTTGTCTTCAACTCCAGGCATT +
Preference number: 5 (lower is better)
Translates to: VSVSGGPAGGPGMTG*PSGGPAGLSSTPGI
Trigger: AATGCCTGGAGTTGAAGACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTGCGGGCCCTCCTGAGACTGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp GTTCTGCCCGCGATTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: VLPAICLSLSAAIRG*LSWSCFLRSPFWWR
Trigger: GCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAATCGCGGGCAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474327.5
CDS CCA 90 bp GGGCGCTGGCACATGGCTGACAGTGTTGTTGGCGGTGGGGAGGGCTaGGCTGGGGTTCTTGACGCTGACCACGGTGGCCTTCTGGAATGT +
Preference number: 5 (lower is better)
Translates to: GRWHMADSVVGGGEG*AGVLDADHGGLLEC
Trigger: ACATTCCAGAAGGCCACCGTGGTCAGCGTCAAGAACCCCAGCCCAGCCCTCCCCACCGCCAACAACACTGTCAGCCATGTGCCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
ENST00000460507.5
ENST00000490679.5
ENST00000629843.2
CDS CCA 90 bp GCGATTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGCGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: AICLSLSAAIRGCLS*SCFLRSPFWWRASS
Trigger: GGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474327.5
CDS-3UTR CAA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCAACTTGGGCAGCACTTaGCGCTCACTTTGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RENDRRDRGSCGICRPPRNLGST*RSLWPG
Trigger: CCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTT...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp CGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCCGGCCTCCTCGCCTCCATCCCGGCAACTaGGGCAGCACTTTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: RENDRRDRGSCGICRPPRLHPGN*GSTLRS
Trigger: TGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAG...GCGAGGAGGCCGGCAAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTAATGTTGGGGGCTGCTaGGGTGGCCGGTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFNVGGC*GGRSRP
Trigger: GGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATT...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACGGCGGGCCAGCAGGCTaGTCTTCAACTCCAGGCATT +
Preference number: 5 (lower is better)
Translates to: WSPKAGTSRATALSFLPNGGPAG*SSTPGI
Trigger: AATGCCTGGAGTTGAAGACAAGCCTGCTGGCCCGCC...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCGCTGCCACTGAGGGCTaGGTCCAGGGCCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVAATEG*VQGPAS
Trigger: GCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGC...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGTACCCCCTGTGAATTaGGAGGGCACAGGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSVPPVN*EGTGPH
Trigger: GTGCGGCCCTGTGCCCTCCAAATTCACAGGGGGTAC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGGCCGGATCTTCCAGCTaGGCCAGGCTTCCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEAGSSS*ARLPEG
Trigger: CCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGC...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACTGGATGCAGAAGCCCTaGGCAGCAAGTCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: WSPKAGTSRATALSFLPNWMQKP*AASLVP
Trigger: GGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCA...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGTGGCAGCTGCGGGATTaGCCGGCCTCCTCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEWQLRD*PASSLC
Trigger: GCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCA...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp GTTCTGCCCGCGATTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTCTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VLPAICLSLSAAIRG*LSWSCFLRSPFCGC
Trigger: GCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAATCGCGGGCAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS GCA 90 bp GGACGGACGAAGCAGGACAAAGGGCCTCCGTGTCCACGTGATCCATaGTCGCCTGGCCCTGCTGGCATCAGTTTGCAGGAGCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GRTKQDKGPPCPRDP*SPGPAGISLQELPP
Trigger: AGGAGGGAGCTCCTGCAAACTGATGCCAGCAGGGCCAGGCGAGCATGGATCACGTGGACACGGAGGCCCTTTGTCCTGCTTCGTCCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS CCA 90 bp CGGGCAGGGACTATATTTCCTCCGGCGCGCGCGCCTGGATCTCGTTaGGCCTCGGCAAAGTTGTGCCTCGGCACGATGCTAATTCGGCAG +
Preference number: 5 (lower is better)
Translates to: RAGTIFPPARAPGSR*ASAKLCLGTMLIRQ
Trigger: CTGCCGAATTAGCATCGTGCCGAGGCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGTCCCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS CCA 90 bp AAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGCGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: KACLSLSAAIRGCLS*SCFLRSPFWWRASS
Trigger: GGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CCA 90 bp CCTTCTTCTTTTTGGTGGCCTGAGCTCCCTGAGATGGCTCCTCTGTaGGCGGCCGCGACTCTGCCGTGCTCTCGGGCTGCGTCTGCACTT +
Preference number: 5 (lower is better)
Translates to: PSSFWWPELPEMAPL*AAATLPCSRAASAL
Trigger: AAGTGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS CCA 90 bp GCGATTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGTGGCTGCCGCCTCATC +
Preference number: 5 (lower is better)
Translates to: AICLSLSAAIRGCLS*SCFLRSPFCGCRLI
Trigger: GATGAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS CCA 90 bp CTTACTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGCGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LTCLSLSAAIRGCLS*SCFLRSPFWWRASS
Trigger: GGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491522.1
CDS CCA 90 bp TCATCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGCGCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SSCLSLSAAIRGCLS*SCFLRSPFWWRASS
Trigger: GGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS-3UTR CAA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCTGGGCCTCGGCAAAGTaGTGCCTCGGCACGATGCTA +
Preference number: 5 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSWASAK*CLGTML
Trigger: TAGCATCGTGCCGAGGCACAACTTTGCCGAGGCCCA...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CAA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACAGGCTGCCCGGCAAGTaGCGCCGGGTCCCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDRLPGK*RRVPGL
Trigger: CAGCCCGGGGACCCGGCGCAACTTGCCGGGCAGCCT...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CAA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCACACTTTGCGCTCACTTaGGCCCGGGCTCCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPHFALT*ARAPGK
Trigger: CTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTG...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCAACTTGGGCAGCACTTaGCGCTCACTTTGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSNLGST*RSLWPG
Trigger: CCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTT...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGCTGGGCTGGGGTTCTaGACGCTGACCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFAGLGF*TLTTVA
Trigger: GGCCACCGTGGTCAGCGTCAAGAACCCCAGCCCAGC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS TCA 90 bp AGCACTGCCGCTCCTTGCCCGGCCAACCTCTGCAAGGAGCTGACCTaGGGACCCGTGACAGGCACTGCAGTGATCGTTCCCAAAGCCTCA +
Preference number: 5 (lower is better)
Translates to: STAAPCPANLCKELT*GPVTGTAVIVPKAS
Trigger: TGAGGCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS GCA 90 bp ATCGTTCCCAAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: IVPKACLSLSAAIRG*LSWSCFLRSPFWWR
Trigger: GCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAACGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS GCA 90 bp ATCCCATCGCTTACTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: IPSLTCLSLSAAIRG*LSWSCFLRSPFWWR
Trigger: GCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGTAAGCGATGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491522.1
CDS CCA 90 bp AAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGTGGCTGCCGCCTCATC +
Preference number: 5 (lower is better)
Translates to: KACLSLSAAIRGCLS*SCFLRSPFCGCRLI
Trigger: GATGAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000420689.1
CDS CCA 90 bp GCACTCCGTCAGCACTCCTCCTCCAACCCAGCGGTGCTCAAGGTGTaGTGGCCATTCCAGCAGTACCAGCAGAGCATGAGGACTCGCCTC +
Preference number: 5 (lower is better)
Translates to: ALRQHSSSNPAVLKV*WPFQQYQQSMRTRL
Trigger: GAGGCGAGTCCTCATGCTCTGCTGGTACTGCTGGAATGGCCACCACACCTTGAGCACCGCTGGGTTGGAGGAGGAGTGCTGACGGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS-3UTR CAA 90 bp CCCAGCCTGTCGTACCCCACCTGGCTCCTAGGTACCCCCTGTGAATTTGGAGGGACATGGCTGACAGTGTaGTTGGCGGTGGGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PSLSYPTWLLGTPCEFGGTWLTV*LAVGRA
Trigger: AGCCCTCCCCACCGCCAACAACACTGTCAGCCATGT...CCCTCCAAATTCACAGGGGGTACCTAGGAGCCAGGTGGGGTACGACAGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCGGCGGGCCAGCAGGCTaGTCTTCAACTCCAGGCATT +
Preference number: 5 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFGGPAG*SSTPGI
Trigger: AATGCCTGGAGTTGAAGACAAGCCTGCTGGCCCGCC...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACCCGTGCTGGGTCCCTaGTGCACAGATGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAPVLGP*CTDERF
Trigger: GAACCTCTCATCTGTGCACAAGGGACCCAGCACGGG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS TCA 90 bp AGCACTGCCGCTCCTTGCCCGGCCAACCTCTGCAAGGAGCTGACCTaGGGACCCGTGACAGGCACTGCAGTGATCGTTCCCAAAGCTTGT +
Preference number: 5 (lower is better)
Translates to: STAAPCPANLCKELT*GPVTGTAVIVPKAC
Trigger: ACAAGCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAGAGGTTGGCCGGGCAAGGAGCGGCAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000420689.1
ENST00000490679.5
ENST00000629843.2
CDS GCA 90 bp ATCGTTCCCAAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTCTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: IVPKACLSLSAAIRG*LSWSCFLRSPFCGC
Trigger: GCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAACGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000420689.1
CDS CCA 90 bp AGGAGGCGTGGAGGAGGCTTGTTGTCAGCACTGATGAGGAGGGGCTaGACTTTGATGCTGTCACTGACCACAGACACGGCGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRRGGGLLSALMRRG*TLMLSLTTDTAVLG
Trigger: CCCCAGCACCGCCGTGTCTGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAGTGCTGACAACAAGCCTCCTCCACGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS CCA 90 bp CTGTGGCCAGAGTCTCTGCAGGCGTCACTGCTTCGTGGAGCTCACTaGCATAGGGTTGGACGGACGAAGCAGGACAAAGGGCCTCCGTGT +
Preference number: 5 (lower is better)
Translates to: LWPESLQASLLRGAH*HRVGRTKQDKGPPC
Trigger: ACACGGAGGCCCTTTGTCCTGCTTCGTCCGTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACTCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS-3UTR CAA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAACATGGCTGACAGTGTaGTTGGCGGTGGGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPTWLTV*LAVGRA
Trigger: AGCCCTCCCCACCGCCAACAACACTGTCAGCCATGT...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCACAGCTCACTGCCTCGTaGCAGCAGCTTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: HACLWSWPRAMHTRVFSAQLTAS*QQLLLL
Trigger: GAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTG...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CACAGGCTCTGGCGGGGATCACTGCAGCGTCCCGGCGCCCAGATGCTCACCTCCCGCGGTAATGCATACTaGGCACAGAGTAGCCAATAT +
Preference number: 5 (lower is better)
Translates to: HRLWRGSLQRPGAQMLTSRGNAY*AQSSQY
Trigger: ATATTGGCTACTCTGTGCCAAGTATGCATTACCGCG...GGAGGTGAGCATCTGGGCGCCGGGACGCTGCAGTGATCCCCGCCAGAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS TCA 90 bp CGGCTGGACCCTGTAGATCACCATCATGGGCCCCTGGCGTGGCTATaGAGCCTGTTTGGCGTGAGTGACTCTGAAGCCCTCCTCTCACCT +
Preference number: 5 (lower is better)
Translates to: RLDPVDHHHGPLAWL*SLFGVSDSEALLSP
Trigger: AGGTGAGAGGAGGGCTTCAGAGTCACTCACGCCAAACAGGCTTCATAGCCACGCCAGGGGCCCATGATGGTGATCTACAGGGTCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS CCA 90 bp CCAGCCGTTTCCTCTCGGTCTCCAGGAGGCCGCTGTAGGCAGGGTTaGCTGTGCTTCTTCTCTTCCGCTCCTGTCGCTTGCTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: PAVSSRSPGGRCRQG*LCFFSSAPVACSGF
Trigger: AAATCCAGAGCAAGCGACAGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCGGCCTCCTGGAGACCGAGAGGAAACGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS CCA 90 bp CTCCGTCAGCACTCCTCCTCCAACCCAGCGGTGCTCAAGGTGTGGTaGCCATTCCAGCAGTACCAGCAGAGCATGAGGACTCGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LRQHSSSNPAVLKVW*PFQQYQQSMRTRLK
Trigger: TTTGAGGCGAGTCCTCATGCTCTGCTGGTACTGCTGGAATGGCCACCACACCTTGAGCACCGCTGGGTTGGAGGAGGAGTGCTGACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS-3UTR CAA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTACACTTTGCGCTCACTTaGGCCCGGGCTCCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLHFALT*ARAPGK
Trigger: CTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTG...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACGCCATGGCGGCGGCATaGCTGGGGGAGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDAMAAA*LGEVEM
Trigger: CATCTCCACCTCCCCCAGCAATGCCGCCGCCATGGC...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGTACCCCCTGTGAATTaGGAGGGCACAGGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVVPPVN*EGTGPH
Trigger: GTGCGGCCCTGTGCCCTCCAAATTCACAGGGGGTAC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGTACCCCCTGTGAATTaGGAGGGCACAGGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: PGRLSCCAESLRTGMWESVPPVN*EGTGPH
Trigger: GTGCGGCCCTGTGCCCTCCAAATTCACAGGGGGTAC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTACTGCCCGCGATTTGTTaGTCGCTGAGCGCGGCGATC +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVLPAIC*SLSAAI
Trigger: GATCGCCGCGCTCAGCGACAAACAAATCGCGGGCAG...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403565.5
CDS TCA 90 bp GCTGGCATCAGTTTGCAGGAGCTCCCTCCTAAGGTCTGGCCAGGATaGGATCAGCTTAGCACTCCGTCAGCACTCCTCCTCCAACCCAGC +
Preference number: 5 (lower is better)
Translates to: AGISLQELPPKVWPG*DQLSTPSALLLQPS
Trigger: GCTGGGTTGGAGGAGGAGTGCTGACGGAGTGCTAAGCTGATCTCATCCTGGCCAGACCTTAGGAGGGAGCTCCTGCAAACTGATGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATCGTGGAGCTGCTTCTaGAGGTCGCCGTTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVSWSCF*RSPFWW
Trigger: CCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGA...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTGATCGTTCCCAAAGCTaGTTTGTCGCTGAGCGCGGC +
Preference number: 5 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFDRSQS*FVAERG
Trigger: GCCGCGCTCAGCGACAAACAAGCTTTGGGAACGATC...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR CAA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCACATGGCTGACAGTGTaGTTGGCGGTGGGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVTWLTV*LAVGRA
Trigger: AGCCCTCCCCACCGCCAACAACACTGTCAGCCATGT...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATACACACCCACACGCCCTaGGGCGCCGTCTTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIHTHTP*GAVLRG
Trigger: GCCCCTCAAGACGGCGCCCAAGGGCGTGTGGGTGTG...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACTGCTTCTCCTCTTCTTaGACTGTCTTGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: WSPKAGTSRATALSFLPNCFSSS*TVLWVT
Trigger: TGTCACCCACAAGACAGTCAAAGAAGAGGAGAAGCA...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCGCTGCCACTGAGGGCTaGGTCCAGGGCCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFAATEG*VQGPAS
Trigger: GCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGC...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGCCGGATCTTCCAGCTaGGCCAGGCTTCCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: THQRQTESKRLAKGRRQPAGSSS*ARLPEG
Trigger: CCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCTGGATGCAGAAGCCCTaGGCAGCAAGTCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVWMQKP*AASLVP
Trigger: GGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCA...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGTCCCCGAAGGCCGGAACCTCCCGAGCCACCGCCCTTTCTTTCCTCCCCAACCGCGGTAATGCATACTaGGCACAGAGTAGCCAATAT +
Preference number: 5 (lower is better)
Translates to: WSPKAGTSRATALSFLPNRGNAY*AQSSQY
Trigger: ATATTGGCTACTCTGTGCCAAGTATGCATTACCGCG...GTTGGGGAGGAAAGAAAGGGCGGTGGCTCGGGAGGTTCCGGCCTTCGGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATCGTGGAGCTGCTTCTaGAGGTCGCCGTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVSWSCF*RSPFCG
Trigger: GCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGA...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS TCA 90 bp GACGCTCAGCTCCTGGGCACCATTCACAGCTGCACCAAAGGATACTaGCACTTCCTGTGGCCAGAGTCTCTGCAGGCGTCACTGCTTCGT +
Preference number: 5 (lower is better)
Translates to: DAQLLGTIHSCTKGY*HFLWPESLQASLLR
Trigger: ACGAAGCAGTGACGCCTGCAGAGACTCTGGCCACAGGAAGTGTCAGTATCCTTTGGTGCAGCTGTGAATGGTGCCCAGGAGCTGAGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 90 bp GTTTCCTCTCGGTCTCCAGGAGGCCGCTGTAGGCAGGGTTGGCTGTaGTTCTTCTCTTCCGCTCCTGTCGCTTGCTCTGGATTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VSSRSPGGRCRQGWL*FFSSAPVACSGFLP
Trigger: TGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCGGCCTCCTGGAGACCGAGAGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS GCA 90 bp AAGGATACTGACACTTCCTGTGGCCAGAGTCTCTGCAGGCGTCACTaGTTCGTGGAGCTCACTGGCATAGGGTTGGACGGACGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: KDTDTSCGQSLCRRH*FVELTGIGLDGRSR
Trigger: CCTGCTTCGTCCGTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACTCTGGCCACAGGAAGTGTCAGTATCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 90 bp ATCGTTCCCAAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTATCGCTTAAG +
Preference number: 5 (lower is better)
Translates to: IVPKACLSLSAAIRG*LSWSCFLRSPLSLK
Trigger: CTTAAGCGATAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS-3UTR CAA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTATCGTGGAGCTGCTTCTaGAGGTCGCCGTTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLSWSCF*RSPFWW
Trigger: CCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGA...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGTTCCCAAAGCTTGTTaGTCGCTGAGCGCGGCGATC +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVVPKAC*SLSAAI
Trigger: GATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAAC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR CAA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCGTTCCCAAAGCTTGTTaGTCGCTGAGCGCGGCGATC +
Preference number: 5 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVVPKAC*SLSAAI
Trigger: GATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAAC...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR CAA 90 bp CCTGGACGCTTATCCTGTTGTGCTGAGTCCCTCAGGACTGGGATGTGGGAATCGGATCGTTCCCAAAGCTaGTTTGTCGCTGAGCGCGGC +
Preference number: 5 (lower is better)
Translates to: PGRLSCCAESLRTGMWESDRSQS*FVAERG
Trigger: GCCGCGCTCAGCGACAAACAAGCTTTGGGAACGATC...CGATTCCCACATCCCAGTCCTGAGGGACTCAGCACAACAGGATAAGCGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR CAA 90 bp TGCGATGCACACACGCGTGTTCAGTGCAATTCGGCACCATGTGATATGCTCGGGGGCGGGCCAGCAGGCTaGTCTTCAACTCCAGGCATT +
Preference number: 5 (lower is better)
Translates to: CDAHTRVQCNSAPCDMLGGGPAG*SSTPGI
Trigger: AATGCCTGGAGTTGAAGACAAGCCTGCTGGCCCGCC...CCCGAGCATATCACATGGTGCCGAATTGCACTGAACACGCGTGTGTGCATCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGTGTGCATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCACTGAGTCCAAGAGATaGGCAAAAGGAAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CVHACLWSWPRAMHTRVFTESKR*AKGRRQ
Trigger: CTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGT...GAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCATGGCAGCTGCGGGATTaGCCGGCCTCCTCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASWQLRD*PASSLC
Trigger: GCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCA...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp ACAGCTGCACCAAAGGATACTGACACTTCCTGTGGCCAGAGTCTCTaGAGGCGTCACTGCTTCGTGGAGCTCACTGGCATAGGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: TAAPKDTDTSCGQSL*RRHCFVELTGIGLD
Trigger: GTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACTCTGGCCACAGGAAGTGTCAGTATCCTTTGGTGCAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS CCA 90 bp GTGGCCACCAATGCGCCCTTCAGGCACTACAAGACGCTCAGCTCCTaGGCACCATTCACAGCTGCACCAAAGGATACTGACACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: VATNAPFRHYKTLSS*APFTAAPKDTDTSC
Trigger: ACAGGAAGTGTCAGTATCCTTTGGTGCAGCTGTGAATGGTGCCCAGGAGCTGAGCGTCTTGTAGTGCCTGAAGGGCGCATTGGTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS CCA 90 bp AAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTATCGCTTAAGAGAAGACTC +
Preference number: 5 (lower is better)
Translates to: KACLSLSAAIRGCLS*SCFLRSPLSLKRRL
Trigger: GAGTCTTCTCTTAAGCGATAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGCCATGGCGGCGGCATaGCTGGGGGAGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPAMAAA*LGEVEM
Trigger: CATCTCCACCTCCCCCAGCAATGCCGCCGCCATGGC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTGCCATGGCGGCGGCATaGCTGGGGGAGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTAMAAA*LGEVEM
Trigger: CATCTCCACCTCCCCCAGCAATGCCGCCGCCATGGC...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCAGGAGGGGCTGGACTTaGATGCTGTCACTGACCACA +
Preference number: 5 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVRRGWT*MLSLTT
Trigger: TGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCT...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAAGGCGTGGAGGAGGCTaGTTGTCAGCACTGATGAGG +
Preference number: 5 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLRRGGG*LSALMR
Trigger: CCTCATCAGTGCTGACAACAAGCCTCCTCCACGCCT...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGGGCTGCGTCTGCACTaGAGGCTGAATGATGATGAC +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVGLRLH*RLNDDD
Trigger: GTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CATGCGTGTCTGTGGTCGTGGCCGCGTGCGATGCACACACGCGTGTTCAGTGCATGCTTCTCCTCTTCTTaGACTGTCTTGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: HACLWSWPRAMHTRVFSACFSSS*TVLWVT
Trigger: TGTCACCCACAAGACAGTCAAAGAAGAGGAGAAGCA...TGCACTGAACACGCGTGTGTGCATCGCACGCGGCCACGACCACAGACACGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAACTGAGTCCAAGAGATaGGCAAAAGGAAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPTESKR*AKGRRQ
Trigger: CTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGT...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CCTGGATGCAGAAGCCCTTGGCAGCAAGTCTGGTCCCCGAAGGCCGGAACCTCCGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PGCRSPWQQVWSPKAGTSASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...GGAGGTTCCGGCCTTCGGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGGGAGGTGTTCCCATTaGTACCTTGAAGCAGAGACT +
Preference number: 5 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPGRCSH*YLEAET
Trigger: AGTCTCTGCTTCAAGGTACAAATGGGAACACCTCCC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGCCGGATCTTCCAGCTaGGCCAGGCTTCCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPAGSSS*ARLPEG
Trigger: CCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCTGGCAGCTGCGGGATTaGCCGGCCTCCTCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFWQLRD*PASSLC
Trigger: GCAGAGCGAGGAGGCCGGCAAATCCCGCAGCTGCCA...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCCCGAGCCGTGCAAGTTaGCAGGCCGGGGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPPSRAS*QAGVRV
Trigger: CACACGCACCCCGGCCTGCAAACTTGCACGGCTCGG...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS CCA 90 bp CTCTTCACATGGATGTTCCTCAAACCCCGGACTCAAGGAACAAGTTaGCGGTGGCGGTGCTGTGCGAGTGATGAGAAGGGCTCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: LFTWMFLKPRTQGTS*RWRCCASDEKGSRK
Trigger: CTTCCTAGAGCCCTTCTCATCACTCGCACAGCACCGCCACCGCCAACTTGTTCCTTGAGTCCGGGGTTTGAGGAACATCCATGTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS-3UTR CAA 90 bp GTGATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTCGCGGTAATGCATACTaGGCACAGAGTAGCCAATAT +
Preference number: 5 (lower is better)
Translates to: VICSGWEPVAPGRLSCCARGNAY*AQSSQY
Trigger: ATATTGGCTACTCTGTGCCAAGTATGCATTACCGCG...AGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATATGCTCGGGGTGGGAGCCCGTGGCTCCTGGACGCTTATCCTGTTGTGCTGAGATGATGATGACCTTGTaGTCAGCACTGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ICSGWEPVAPGRLSCCAEMMMTL*SALMRR
Trigger: CCTCCTCATCAGTGCTGACAACAAGGTCATCATCAT...CTCAGCACAACAGGATAAGCGTCCAGGAGCCACGGGCTCCCACCCCGAGCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACAGGAGGGGCTGGACTTaGATGCTGTCACTGACCACA +
Preference number: 5 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDRRGWT*MLSLTT
Trigger: TGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCT...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTTGCTTCTCCTCTTCTTaGACTGTCTTGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFCFSSS*TVLWVT
Trigger: TGTCACCCACAAGACAGTCAAAGAAGAGGAGAAGCA...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp AAAACCTGCCGGATCTTCCAGCTTGGCCAGGCTTCCCGAGGGGAGGTGTTCCCAGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: KTCRIFQLGQASRGEVFPASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...TGGGAACACCTCCCCTCGGGAAGCCTGGCCAAGCTGGAAGATCCGGCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTCTCCCGGAGTCGTGAGAATGACAGGAGGGACCGTGGCAGCTGCGGGATTTCGCGGTAATGCATACTaGGCACAGAGTAGCCAATAT +
Preference number: 5 (lower is better)
Translates to: VSPGVVRMTGGTVAAAGFRGNAY*AQSSQY
Trigger: ATATTGGCTACTCTGTGCCAAGTATGCATTACCGCG...AAATCCCGCAGCTGCCACGGTCCCTCCTGTCATTCTCACGACTCCGGGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAATCGTGGAGCTGCTTCTaGAGGTCGCCGTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ALARREEWNTYRLFQRRQSWSCF*RSPFCG
Trigger: GCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGA...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396103.7
ENST00000403565.5
CDS CCA 90 bp ACAGATAAAGCAGCCTGGTCAGGAGACCTCAGGGAACTCTTCACATaGATGTTCCTCAAACCCCGGACTCAAGGAACAAGTTGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: TDKAAWSGDLRELFT*MFLKPRTQGTSWRW
Trigger: CCACCGCCAACTTGTTCCTTGAGTCCGGGGTTTGAGGAACATCCATGTGAAGAGTTCCCTGAGGTCTCCTGACCAGGCTGCTTTATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS-3UTR CAA 90 bp ACAACAGGGTTGCAGCTCCACTCTGCCCAGAAACTCCATGAGAAAAACGCATCAGTTCCCAAAGCTTGTTaGTCGCTGAGCGCGGCGATC +
Preference number: 5 (lower is better)
Translates to: TTGLQLHSAQKLHEKNASVPKAC*SLSAAI
Trigger: GATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAAC...TGATGCGTTTTTCTCATGGAGTTTCTGGGCAGAGTGGAGCTGCAACCCTGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR CAA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTGGATGCAGAAGCCCTaGGCAGCAAGTCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTWMQKP*AASLVP
Trigger: GGGGACCAGACTTGCTGCCAAGGGCTTCTGCATCCA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CTAGGAGCGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCATGATGATGACCTTGTaGTCAGCACTGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LGAWGIEELPRSTTPLLVMMMTL*SALMRR
Trigger: CCTCCTCATCAGTGCTGACAACAAGGTCATCATCAT...GACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACGCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 90 bp GCGAGTGATGAGAAGGGCTCTAGGAAGCTGCCTCCAATCTCAGCTTaGCCTCCTCCAAAGAAAACGCTGGATTTTATTTGTGGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: ASDEKGSRKLPPISA*PPPKKTLDFICGCP
Trigger: AGGGCACCCACAAATAAAATCCAGCGTTTTCTTTGGAGGAGGCCAAGCTGAGATTGGAGGCAGCTTCCTAGAGCCCTTCTCATCACTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGATCGTTCCCAAAGCTaGTTTGTCGCTGAGCGCGGC +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPDRSQS*FVAERG
Trigger: GCCGCGCTCAGCGACAAACAAGCTTTGGGAACGATC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000629843.2
CDS-3UTR CAA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACTTCCGCTCCTGTCGCTaGCTCTGGATTTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDFRSCR*LWISSK
Trigger: TTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAA...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTCAGCTCACTGCCTCGTaGCAGCAGCTTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTQLTAS*QQLLLL
Trigger: GAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTG...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGCTGCCACTGAGGGCTaGGTCCAGGGCCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNAATEG*VQGPAS
Trigger: GCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCAGGAGGGGCTGGACTTaGATGCTGTCACTGACCACA +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPRRGWT*MLSLTT
Trigger: TGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCT...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGCGTGGAGGAGGCTTGTaGTCAGCACTGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QFVTLIILTERGPGGSAKRGGGL*SALMRR
Trigger: CCTCCTCATCAGTGCTGACAACAAGCCTCCTCCACG...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGGGCTGCGTCTGCACTaGAGGCTGAATGATGATGAC +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPGLRLH*RLNDDD
Trigger: GTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CGTGGGGCATTGAGGAACTACCTAGATCCACTACCCCGCTTCTCGTCCCAACTAGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: RGALRNYLDPLPRFSSQLASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...TAGTTGGGACGAGAAGCGGGGTAGTGGATCTAGGTAGTTCCTCAATGCCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTAGTTCCCATTTGTACCTaGAAGCAGAGACTACTAGAA +
Preference number: 5 (lower is better)
Translates to: ADRTPRLCKQGPNNFPWVVPICT*KQRLLE
Trigger: TTCTAGTAGTCTCTGCTTCAAGGTACAAATGGGAAC...TACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ACGCATCAACGGCAAACTGAGTCCAAGAGATTGGCAAAAGGAAGGAGGCAGCCTGGGAGGTGTTCCCATTaGTACCTTGAAGCAGAGACT +
Preference number: 5 (lower is better)
Translates to: THQRQTESKRLAKGRRQPGRCSH*YLEAET
Trigger: AGTCTCTGCTTCAAGGTACAAATGGGAACACCTCCC...AGGCTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGTTTGCCGTTGATGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGCCATGGCGGCGGCATaGCTGGGGGAGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNAMAAA*LGEVEM
Trigger: CATCTCCACCTCCCCCAGCAATGCCGCCGCCATGGC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTTTATGAATTAAGGCCGACAGAACCCCCAGGCTGTGTAAGCAGGGTCCCAATATTCCGCTCCTGTCGCTaGCTCTGGATTTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: VYELRPTEPPGCVSRVPIFRSCR*LWISSK
Trigger: TTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAA...TATTGGGACCCTGCTTACACAGCCTGGGGGTTCTGTCGGCCTTAATTCATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAACAGCTCACTGCCTCGTaGCAGCAGCTTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKQLTAS*QQLLLL
Trigger: GAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTG...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAAGGGCTGCGTCTGCACTaGAGGCTGAATGATGATGAC +
Preference number: 5 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKGLRLH*RLNDDD
Trigger: GTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCC...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CATACTTGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTCCGCTCCTGTCGCTaGCTCTGGATTTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: HTWHRVANIEDVCLTRFTFRSCR*LWISSK
Trigger: TTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAA...AGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCAAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp TGGCACAGAGTAGCCAATATAGAAGACGTGTGCCTCACACGGTTCACTTTGTTCACTGAGTCCAAGAGATaGGCAAAAGGAAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: WHRVANIEDVCLTRFTLFTESKR*AKGRRQ
Trigger: CTGCCTCCTTCCTTTTGCCAATCTCTTGGACTCAGT...GAACAAAGTGAACCGTGTGAGGCACACGTCTTCTATATTGGCTACTCTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GAACCCCCAGGCTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATGAAGACGTTCCCATTTGTACCTaGAAGCAGAGACTACTAGAA +
Preference number: 5 (lower is better)
Translates to: EPPGCVSRVPITFRGYEDVPICT*KQRLLE
Trigger: TTCTAGTAGTCTCTGCTTCAAGGTACAAATGGGAAC...GTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAGCCTGGGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTGCCCCGGGAGGTGTTCCCATTaGTACCTTGAAGCAGAGACT +
Preference number: 5 (lower is better)
Translates to: VVKLNDSTPRRKPAKCCPGRCSH*YLEAET
Trigger: AGTCTCTGCTTCAAGGTACAAATGGGAACACCTCCC...GGGGCAGCATTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 90 bp TTCCCAAAGCCTCAATGCCTCTGCAAGAAAACACGATTCTCTTTCTaGTTCTCCATGGAGAGCCACGTGGAGCTGAATCAGGAACTTTCT +
Preference number: 5 (lower is better)
Translates to: FPKPQCLCKKTRFSF*FSMESHVELNQELS
Trigger: AGAAAGTTCCTGATTCAGCTCCACGTGGCTCTCCATGGAGAAGCAGAAAGAGAATCGTGTTTTCTTGCAGAGGCATTGAGGCTTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACCTCCATCCCGGCAACTaGGGCAGCACTTTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNLHPGN*GSTLRS
Trigger: TGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAG...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS-3UTR CAA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATTCCGCTCCTGTCGCTaGCTCTGGATTTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKFRSCR*LWISSK
Trigger: TTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAA...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp GCACTGGCAAGAAGGGAGGAGTGGAATACTTATCGGCTCTTCCAAAGGAGACAAGTTCCCATTTGTACCTaGAAGCAGAGACTACTAGAA +
Preference number: 5 (lower is better)
Translates to: ALARREEWNTYRLFQRRQVPICT*KQRLLE
Trigger: TTCTAGTAGTCTCTGCTTCAAGGTACAAATGGGAAC...TTGTCTCCTTTGGAAGAGCCGATAAGTATTCCACTCCTCCCTTCTTGCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp AGGGCTTCAGTCGTTAAGTTGAATGATTCAACCCCAAGGAGAAAACCTGCCAAATGCTTCTCCTCTTCTTaGACTGTCTTGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: RASVVKLNDSTPRRKPAKCFSSS*TVLWVT
Trigger: TGTCACCCACAAGACAGTCAAAGAAGAGGAGAAGCA...TTTGGCAGGTTTTCTCCTTGGGGTTGAATCATTCAACTTAACGACTGAAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACCAGCTCACTGCCTCGTaGCAGCAGCTTCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNQLTAS*QQLLLL
Trigger: GAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTG...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp CAATTCGTAACCCTAATAATACTGACAGAAAGGGGCCCAGGTGGTTCTGCAAAGGCTTCAGTCGTTAAGTaGAATGATTCAACCCCAAGG +
Preference number: 5 (lower is better)
Translates to: QFVTLIILTERGPGGSAKASVVK*NDSTPR
Trigger: CCTTGGGGTTGAATCATTCAACTTAACGACTGAAGC...CTTTGCAGAACCACCTGGGCCCCTTTCTGTCAGTATTATTAGGGTTACGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS TCA 90 bp ATGAGGACTCGCCTCAAAATGCAAATTCTCAGGCCCACCCAAGAGTaGTTAAATCTAAAACCCTGGGAGGAAAGGCTCAATAATCTGTGT +
Preference number: 5 (lower is better)
Translates to: MRTRLKMQILRPTQE*LNLKPWEERLNNLC
Trigger: ACACAGATTATTGAGCCTTTCCTCCCAGGGTTTTAGATTTAATCACTCTTGGGTGGGCCTGAGAATTTGCATTTTGAGGCGAGTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACAGGAGGGGCTGGACTTaGATGCTGTCACTGACCACA +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNRRGWT*MLSLTT
Trigger: TGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCT...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACGGGCTGCGTCTGCACTaGAGGCTGAATGATGATGAC +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNGLRLH*RLNDDD
Trigger: GTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCC...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS TCA 90 bp TCCTCTCACCTGACAAGGTATCTTTGGGTTTTCTCCGTCCTCCCTTaGATTCTTTCTGCCATGTGTTTTTCAGATGATAAAGCATTGGTG +
Preference number: 5 (lower is better)
Translates to: SSHLTRYLWVFSVLP*ILSAMCFSDDKALV
Trigger: CACCAATGCTTTATCATCTGAAAAACACATGGCAGAAAGAATTCAAGGGAGGACGGAGAAAACCCAAAGATACCTTGTCAGGTGAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS TCA 90 bp CCCAATACCTCAAGATGCTGCTACACAAATGTTAGTTGTTGTTCATaGATGAGGAACGAGGAAATCAGTCCCCTGCTCACTAATCATCTT +
Preference number: 5 (lower is better)
Translates to: PNTSRCCYTNVSCCS*MRNEEISPLLTNHL
Trigger: AAGATGATTAGTGAGCAGGGGACTGATTTCCTCGTTCCTCATTCATGAACAACAACTAACATTTGTGTAGCAGCATCTTGAGGTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS-3UTR CAA 90 bp ATTACACTGTTAAAACATGTAACTCAATCCATCCGCGAAGAAAACCAAACCAACATGATGATGACCTTGTaGTCAGCACTGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ITLLKHVTQSIREENQTNMMMTL*SALMRR
Trigger: CCTCCTCATCAGTGCTGACAACAAGGTCATCATCAT...GTTGGTTTGGTTTTCTTCGCGGATGGATTGAGTTACATGTTTTAACAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS TCA 90 bp ATACCTCAAGATGCTGCTACACAAATGTTAGTTGTTGTTCATGAATaGGGAACGAGGAAATCAGTCCCCTGCTCACTAATCATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: IPQDAATQMLVVVHE*GTRKSVPCSLIILF
Trigger: AAACAAGATGATTAGTGAGCAGGGGACTGATTTCCTCGTTCCTCATTCATGAACAACAACTAACATTTGTGTAGCAGCATCTTGAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS CAA 90 bp CTTGGGCAGCACTTTGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTaGCGCGGCTCCGCGGGGGCCAGAGCGGGCGCGGGCGGACGCGGC +
Preference number: 6 (lower is better)
Translates to: LGQHFALTLARAPGK*RGSAGARAGAGGRG
Trigger: GCCGCGTCCGCCCGCGCCCGCTCTGGCCCCCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS GCA 72 bp ACTTTGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTTaGGCGGCTCCGCGGGGGCCAGAGCGGGCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: TLRSLWPGLPGS*AAPRGPERARA
Trigger: CGCCCGCGCCCGCTCTGGCCCCCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CAA 72 bp CACTTTGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTaGCGCGGCTCCGCGGGGGCCAGAGCGGGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: HFALTLARAPGK*RGSAGARAGAG
Trigger: GCCCGCGCCCGCTCTGGCCCCCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CCA 72 bp GGGCTCGGCGAGGGCCTGGGGCTGGCTGCCGGGCGCTaGCACATGGCTGACAGTGTTGTTGGCGGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: GLGEGLGLAAGR*HMADSVVGGGE
Trigger: CTCCCCACCGCCAACAACACTGTCAGCCATGTGCCAGCGCCCGGCAGCCAGCCCCAGGCCCTCGCCGAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
ENST00000490679.5
ENST00000629843.2
CDS GCA 72 bp ACGCTGACCACGGTGGCCTTCTGGAATGTTGGGGGCTaGTTGGGTGGCCGGTCCCGGCCCGGGGCAACGGGG +
Preference number: 6 (lower is better)
Translates to: TLTTVAFWNVGG*LGGRSRPGATG
Trigger: CCCCGTTGCCCCGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGTCAGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
ENST00000460507.5
ENST00000490679.5
ENST00000629843.2
CDS GCA 72 bp CGCGCGAGTTCCACGGCGAGCGCCTCGGGCCGGCTCTaGAGCTCCATCCCGGCAACTTGGGCAGCACTTTGC +
Preference number: 6 (lower is better)
Translates to: RASSTASASGRL*SSIPATWAALC
Trigger: GCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGCGCTCGCCGTGGAACTCGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000474327.5
ENST00000491522.1
ENST00000629843.2
CDS CCA 72 bp AGTTGTGGCCCTGGGGGTGCTGGACGGTGGGGTGTGTaGCTGCCACTGAGGGCTTGGTCCAGGGCCCGGCCA +
Preference number: 6 (lower is better)
Translates to: SCGPGGAGRWGV*LPLRAWSRARP
Trigger: TGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCCAGCACCCCCAGGGCCACAACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CAA 90 bp CTCGGGCCGGCTCTGCAGCTCCATCCCGGCAACTTGGGCAGCACTTaGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTTGCGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: LGPALQLHPGNLGST*RSLWPGLPGSCAAP
Trigger: CGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CAA 90 bp CACGGCGAGCGCCTCGGGCCGGCTCTGCAGCTCCATCCCGGCAACTaGGGCAGCACTTTGCGCTCACTTTGGCCCGGGCTCCCGGGAAGT +
Preference number: 6 (lower is better)
Translates to: HGERLGPALQLHPGN*GSTLRSLWPGLPGS
Trigger: ACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGCGCTCGCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000491522.1
ENST00000629843.2
CDS CAA 90 bp TCTGCAGCTCCATCCCGGCAACTTGGGCAGCACTTTGCGCTCACTTaGGCCCGGGCTCCCGGGAAGTTGCGCGGCTCCGCGGGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SAAPSRQLGQHFALT*ARAPGKLRGSAGAR
Trigger: TCTGGCCCCCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CCA 72 bp CATCCCGGCAACTTGGGCAGCACTTTGCGCTCACTTTaGCCCGGGCTCCCGGGAAGTTGCGCGGCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: HPGNLGSTLRSL*PGLPGSCAAPR
Trigger: CCGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CCA 72 bp GTTCTTGACGCTGACCACGGTGGCCTTCTGGAATGTTaGGGGCTGCTTGGGTGGCCGGTCCCGGCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: VLDADHGGLLEC*GLLGWPVPARG
Trigger: GCCCCGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGTCAGCGTCAAGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
ENST00000460507.5
ENST00000490679.5
ENST00000629843.2
CDS CAA 72 bp CCATCCCGGCAACTTGGGCAGCACTTTGCGCTCACTTaGGCCCGGGCTCCCGGGAAGTTGCGCGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: PSRQLGQHFALT*ARAPGKLRGSA
Trigger: CGCGGAGCCGCGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313237.10
ENST00000629843.2
CDS CAA 72 bp CGCCTCGGGCCGGCTCTGCAGCTCCATCCCGGCAACTaGGGCAGCACTTTGCGCTCACTTTGGCCCGGGCTC +
Preference number: 6 (lower is better)
Translates to: RLGPALQLHPGN*GSTLRSLWPGL
Trigger: GAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGCCGGCCCGAGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000491522.1
ENST00000629843.2
CDS TCA 72 bp CGGCGATCCGCGGCTGCCTTTCGTGGAGCTGCTTCTTaGGGTCGCCGTTCTGGTGGCGCGCGAGTTCCACGG +
Preference number: 6 (lower is better)
Translates to: RRSAAAFRGAAS*GRRSGGARVPR
Trigger: CCGTGGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000474327.5
ENST00000491522.1
ENST00000495348.1
ENST00000629843.2
CDS TCA 72 bp CGGCGATCCGCGGCTGCCTTTCGTGGAGCTGCTTCTTaGGGTCGCCGTTCTGTGGCTGCCGCCTCATCGGGG +
Preference number: 6 (lower is better)
Translates to: RRSAAAFRGAAS*GRRSVAAASSG
Trigger: CCCCGATGAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
CDS GCA 72 bp CTGAGCGCGGCGATCCGCGGCTGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTCTGGTGGCGCGCGAGT +
Preference number: 6 (lower is better)
Translates to: LSAAIRGCLSWS*FLRSPFWWRAS
Trigger: ACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000474327.5
ENST00000491522.1
ENST00000495348.1
ENST00000629843.2
CDS GCA 72 bp TCCCTGAGATGGCTCCTCTGTGGGCGGCCGCGACTCTaGCGTGCTCTCGGGCTGCGTCTGCACTTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SLRWLLCGRPRL*RALGLRLHLRL
Trigger: CAGCCTCAAGTGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTCAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS GCA 72 bp ACTGCTGACGCCAGCCGCCGGTCCCGCTCCTCCAGCTaGTGGTGCTCGTTCTGCAGCTCACTGCCTCGTTGC +
Preference number: 6 (lower is better)
Translates to: TADASRRSRSSS*WCSFCSSLPRC
Trigger: GCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGACCGGCGGCTGGCGTCAGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 72 bp CTGAGCGCGGCGATCCGCGGCTGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTCTGTGGCTGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: LSAAIRGCLSWS*FLRSPFCGCRL
Trigger: GAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
CDS CCA 72 bp GGGCTGGGGTTCTTGACGCTGACCACGGTGGCCTTCTaGAATGTTGGGGGCTGCTTGGGTGGCCGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GLGFLTLTTVAF*NVGGCLGGRSR
Trigger: CCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGTCAGCGTCAAGAACCCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
ENST00000460507.5
ENST00000490679.5
ENST00000629843.2
CDS CCA 72 bp TTTTGGTGGCCTGAGCTCCCTGAGATGGCTCCTCTGTaGGCGGCCGCGACTCTGCCGTGCTCTCGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: FWWPELPEMAPL*AAATLPCSRAA
Trigger: CGCAGCCCGAGAGCACGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTCAGGGAGCTCAGGCCACCAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS CAA 72 bp GCGGCGATCCGCGGCTGCCTTTCGTGGAGCTGCTTCTaGAGGTCGCCGTTCTGGTGGCGCGCGAGTTCCACG +
Preference number: 6 (lower is better)
Translates to: AAIRGCLSWSCF*RSPFWWRASST
Trigger: CGTGGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000474327.5
ENST00000491522.1
ENST00000495348.1
ENST00000629843.2
CDS CAA 72 bp GCGGCGATCCGCGGCTGCCTTTCGTGGAGCTGCTTCTaGAGGTCGCCGTTCTGTGGCTGCCGCCTCATCGGG +
Preference number: 6 (lower is better)
Translates to: AAIRGCLSWSCF*RSPFCGCRLIG
Trigger: CCCGATGAGGCGGCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
CDS CCA 72 bp GCGGGCAGGGACTATATTTCCTCCGGCGCGCGCGCCTaGATCTCGTTGGGCCTCGGCAAAGTTGTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: AGRDYISSGARA*ISLGLGKVVPR
Trigger: CCGAGGCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGTCCCTGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS CCA 72 bp TTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: LSLSAAIRGCLS*SCFLRSPFWWR
Trigger: GCGCCACCAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000474327.5
ENST00000491522.1
ENST00000495348.1
ENST00000629843.2
CDS CCA 72 bp GACCCCTCTGGGAGTCTGAGCGTGCGTCGCCCAGGCTaGCACTTTTTAGGGCGCCGCCAAAGTGCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: DPSGSLSVRRPG*HFLGRRQSAQP
Trigger: TGGCTGGGCACTTTGGCGGCGCCCTAAAAAGTGCCAGCCTGGGCGACGCACGCTCAGACTCCCAGAGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491522.1
CDS GCA 72 bp CTCTGCAGCTCCATCCCGGCAACTTGGGCAGCACTTTaGGCTCACTTTGGCCCGGGCTCCCGGGAAGTTGCG +
Preference number: 6 (lower is better)
Translates to: LCSSIPATWAAL*AHFGPGSREVA
Trigger: CGCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000491522.1
ENST00000629843.2
CDS GCA 72 bp GGCTGCAGGTTGGCCCCTCGCTTGCAGGCGGCACAGTaGTCATCGTGGGTGATCTCGTTCTTCCAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: GCRLAPRLQAAQ*SSWVISFFQQG
Trigger: CCCCTGCTGGAAGAACGAGATCACCCACGATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACCTGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS GCA 72 bp CGCCGGTCCCGCTCCTCCAGCTGCTGGTGCTCGTTCTaGAGCTCACTGCCTCGTTGCAGCAGCTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: RRSRSSSCWCSF*SSLPRCSSFCF
Trigger: GAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCAGCTGGAGGAGCGGGACCGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 72 bp TTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTCTGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LSLSAAIRGCLS*SCFLRSPFCGC
Trigger: GCAGCCACAGAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000420689.1
CDS CAA 72 bp GCTCTGCAGCTCCATCCCGGCAACTTGGGCAGCACTTaGCGCTCACTTTGGCCCGGGCTCCCGGGAAGTTGC +
Preference number: 6 (lower is better)
Translates to: ALQLHPGNLGST*RSLWPGLPGSC
Trigger: GCAACTTCCCGGGAGCCCGGGCCAAAGTGAGCGCAAAGTGCTGCCCAAGTTGCCGGGATGGAGCTGCAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313237.10
ENST00000491522.1
ENST00000629843.2
CDS GCA 72 bp CTGCAAGGAGCTGACCTGAGGACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGCCCCGTGCTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: LQGADLRTRDRH*SDRSQSPVLGP
Trigger: GGGACCCAGCACGGGGCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403565.5
ENST00000474327.5
CDS CAA 90 bp GCGGGCAGGGACTATATTTCCTCCGGCGCGCGCGCCTGGATCTCGTaGGGCCTCGGCAAAGTTGTGCCTCGGCACGATGCTAATTCGGCA +
Preference number: 6 (lower is better)
Translates to: AGRDYISSGARAWIS*GLGKVVPRHDANSA
Trigger: TGCCGAATTAGCATCGTGCCGAGGCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGTCCCTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS GCA 72 bp CGGTCTCCAGGAGGCCGCTGTAGGCAGGGTTGGCTGTaGTTCTTCTCTTCCGCTCCTGTCGCTTGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RSPGGRCRQGWL*FFSSAPVACSG
Trigger: TCCAGAGCAAGCGACAGGAGCGGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCGGCCTCCTGGAGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS GCA 72 bp GCGATTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTC +
Preference number: 6 (lower is better)
Translates to: AICLSLSAAIRG*LSWSCFLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403565.5
ENST00000474327.5
CDS CCA 72 bp GGGTGGGGAACTTTGAGAACTGGAGACAGACCCCTCTaGGAGTCTGAGCGTGCGTCGCCCAGGCTGGCACTT +
Preference number: 6 (lower is better)
Translates to: GWGTLRTGDRPL*ESERASPRLAL
Trigger: AAGTGCCAGCCTGGGCGACGCACGCTCAGACTCCCAGAGGGGTCTGTCTCCAGTTCTCAAAGTTCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491522.1
CDS CAA 72 bp GACTATATTTCCTCCGGCGCGCGCGCCTGGATCTCGTaGGGCCTCGGCAAAGTTGTGCCTCGGCACGATGCT +
Preference number: 6 (lower is better)
Translates to: DYISSGARAWIS*GLGKVVPRHDA
Trigger: AGCATCGTGCCGAGGCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS CAA 90 bp CGTGGAGGAGGCTTGTTGTCAGCACTGATGAGGAGGGGCTGGACTTaGATGCTGTCACTGACCACAGACACGGCGGTGCTGGGGGCCATG +
Preference number: 6 (lower is better)
Translates to: RGGGLLSALMRRGWT*MLSLTTDTAVLGAM
Trigger: CATGGCCCCCAGCACCGCCGTGTCTGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAGTGCTGACAACAAGCCTCCTCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS GCA 72 bp AAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTC +
Preference number: 6 (lower is better)
Translates to: KACLSLSAAIRG*LSWSCFLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000420689.1
ENST00000629843.2
CDS GCA 72 bp CTCCTCAGGGCCATTCGGGGTAGGCAGCAGAAGGAGTaGATCCGAGACCACCTGTACCGCACACAGAGTTGG +
Preference number: 6 (lower is better)
Translates to: LLRAIRGRQQKE*IRDHLYRTQSW
Trigger: CCAACTCTGTGTGCGGTACAGGTGGTCTCGGATGCACTCCTTCTGCTGCCTACCCCGAATGGCCCTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 72 bp CTTACTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTC +
Preference number: 6 (lower is better)
Translates to: LTCLSLSAAIRG*LSWSCFLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491522.1
CDS GCA 72 bp TCATCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTC +
Preference number: 6 (lower is better)
Translates to: SSCLSLSAAIRG*LSWSCFLRSPF
Trigger: GAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS CCA 72 bp ACTATATTTCCTCCGGCGCGCGCGCCTGGATCTCGTTaGGCCTCGGCAAAGTTGTGCCTCGGCACGATGCTA +
Preference number: 6 (lower is better)
Translates to: TIFPPARAPGSR*ASAKLCLGTML
Trigger: TAGCATCGTGCCGAGGCACAACTTTGCCGAGGCCCAACGAGATCCAGGCGCGCGCGCCGGAGGAAATATAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313237.10
CDS CCA 72 bp TTGGCCCCTCGCTTGCAGGCGGCACAGTGCTCATCGTaGGTGATCTCGTTCTTCCAGCAGGGGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: LAPRLQAAQCSS*VISFFQQGSSL
Trigger: CAATGAGGACCCCTGCTGGAAGAACGAGATCACCCACGATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CCA 72 bp TTGTCGCTGAGCGCGGCGATCCGCGGCTGCCTTTCGTaGAGCTGCTTCTTGAGGTCGCCGTTATCGCTTAAG +
Preference number: 6 (lower is better)
Translates to: LSLSAAIRGCLS*SCFLRSPLSLK
Trigger: CTTAAGCGATAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS CAA 72 bp AGGCGTCACTGCTTCGTGGAGCTCACTGGCATAGGGTaGGACGGACGAAGCAGGACAAAGGGCCTCCGTGTC +
Preference number: 6 (lower is better)
Translates to: RRHCFVELTGIG*DGRSRTKGLRV
Trigger: GACACGGAGGCCCTTTGTCCTGCTTCGTCCGTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS CAA 90 bp AGTCTCTGCAGGCGTCACTGCTTCGTGGAGCTCACTGGCATAGGGTaGGACGGACGAAGCAGGACAAAGGGCCTCCGTGTCCACGTGATC +
Preference number: 6 (lower is better)
Translates to: SLCRRHCFVELTGIG*DGRSRTKGLRVHVI
Trigger: GATCACGTGGACACGGAGGCCCTTTGTCCTGCTTCGTCCGTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS TCA 72 bp ATGGGCCCCTGGCGTGGCTATGAAGCCTGTTTGGCGTaGGTGACTCTGAAGCCCTCCTCTCACCTGACAAGG +
Preference number: 6 (lower is better)
Translates to: MGPWRGYEACLA*VTLKPSSHLTR
Trigger: CCTTGTCAGGTGAGAGGAGGGCTTCAGAGTCACTCACGCCAAACAGGCTTCATAGCCACGCCAGGGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS TCA 72 bp CGGCGATCCGCGGCTGCCTTTCGTGGAGCTGCTTCTTaGGGTCGCCGTTATCGCTTAAGAGAAGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: RRSAAAFRGAAS*GRRYRLREDSR
Trigger: CCTGGAGTCTTCTCTTAAGCGATAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS TCA 72 bp GCCCATGGCAGGCTGGCGGATCACAGGACCATAGTCTaGAGGGCCACAGATAAAGCAGCCTGGTCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: AHGRLADHRTIV*RATDKAAWSGD
Trigger: GTCTCCTGACCAGGCTGCTTTATCTGTGGCCCTTCAGACTATGGTCCTGTGATCCGCCAGCCTGCCATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS GCA 72 bp GACACTTCCTGTGGCCAGAGTCTCTGCAGGCGTCACTaGTTCGTGGAGCTCACTGGCATAGGGTTGGACGGA +
Preference number: 6 (lower is better)
Translates to: DTSCGQSLCRRH*FVELTGIGLDG
Trigger: TCCGTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACTCTGGCCACAGGAAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 72 bp CTGAGCGCGGCGATCCGCGGCTGCCTTTCGTGGAGCTaGTTCTTGAGGTCGCCGTTATCGCTTAAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LSAAIRGCLSWS*FLRSPLSLKRR
Trigger: TCTTCTCTTAAGCGATAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS GCA 72 bp AAAGCTTGTTTGTCGCTGAGCGCGGCGATCCGCGGCTaGCTTTCGTGGAGCTGCTTCTTGAGGTCGCCGTTA +
Preference number: 6 (lower is better)
Translates to: KACLSLSAAIRG*LSWSCFLRSPL
Trigger: TAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS CCA 72 bp GAGTCTCTGCAGGCGTCACTGCTTCGTGGAGCTCACTaGCATAGGGTTGGACGGACGAAGCAGGACAAAGGG +
Preference number: 6 (lower is better)
Translates to: ESLQASLLRGAH*HRVGRTKQDKG
Trigger: CCCTTTGTCCTGCTTCGTCCGTCCAACCCTATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS CAA 72 bp GCGGCGATCCGCGGCTGCCTTTCGTGGAGCTGCTTCTaGAGGTCGCCGTTATCGCTTAAGAGAAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: AAIRGCLSWSCF*RSPLSLKRRLQ
Trigger: CTGGAGTCTTCTCTTAAGCGATAACGGCGACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490679.5
CDS TCA 72 bp TTCCCAAAGCCCCGTGCTGGGTCCCTTGTGCACAGATaGGAGGTTCTGCCCGCGATTTGTTTGTCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: FPKPRAGSLVHR*EVLPAICLSLS
Trigger: GCTCAGCGACAAACAAATCGCGGGCAGAACCTCTCATCTGTGCACAAGGGACCCAGCACGGGGCTTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403565.5
ENST00000474327.5
CDS TCA 72 bp CCTGTAGATCACCATCATGGGCCCCTGGCGTGGCTATaGAGCCTGTTTGGCGTGAGTGACTCTGAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PVDHHHGPLAWL*SLFGVSDSEAL
Trigger: GAGGGCTTCAGAGTCACTCACGCCAAACAGGCTTCATAGCCACGCCAGGGGCCCATGATGGTGATCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 72 bp CTGCAAGGAGCTGACCTGAGGACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGCCTCAATGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LQGADLRTRDRH*SDRSQSLNASA
Trigger: TGCAGAGGCATTGAGGCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS CCA 72 bp TTCCTCAAACCCCGGACTCAAGGAACAAGTTGGCGGTaGCGGTGCTGTGCGAGTGATGAGAAGGGCTCTAGG +
Preference number: 6 (lower is better)
Translates to: FLKPRTQGTSWR*RCCASDEKGSR
Trigger: CCTAGAGCCCTTCTCATCACTCGCACAGCACCGCCACCGCCAACTTGTTCCTTGAGTCCGGGGTTTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS CAA 72 bp CCGCGACTCTGCCGTGCTCTCGGGCTGCGTCTGCACTaGAGGCTGAATGATGATGACCTTGTTGTCAGCACT +
Preference number: 6 (lower is better)
Translates to: PRLCRALGLRLH*RLNDDDLVVST
Trigger: AGTGCTGACAACAAGGTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCCGAGAGCACGGCAGAGTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS CAA 90 bp ATGATGATGACCTTGTTGTCAGCACTGATGAGGAGGGGCTGGACTTaGATGCTGTCACTGACCACAGACACGGCGGTGCTGGGGGCCATG +
Preference number: 6 (lower is better)
Translates to: MMMTLLSALMRRGWT*MLSLTTDTAVLGAM
Trigger: CATGGCCCCCAGCACCGCCGTGTCTGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAGTGCTGACAACAAGGTCATCATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000420689.1
ENST00000629843.2
CDS TCA 72 bp CTGTGTAAGCAGGGTCCCAATAACTTTCCGTGGGTATaGAGACTGGTCCCTCGGGGTCAGTTGTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LCKQGPNNFPWV*RLVPRGQLWPW
Trigger: CCAGGGCCACAACTGACCCCGAGGGACCAGTCTTCATACCCACGGAAAGTTATTGGGACCCTGCTTACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS TCA 72 bp AGTTTGCAGGAGCTCCCTCCTAAGGTCTGGCCAGGATaGGATCAGCTTAGCACTCCGTCAGCACTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLQELPPKVWPG*DQLSTPSALLL
Trigger: GAGGAGGAGTGCTGACGGAGTGCTAAGCTGATCTCATCCTGGCCAGACCTTAGGAGGGAGCTCCTGCAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS TCA 72 bp CTCCTGGGCACCATTCACAGCTGCACCAAAGGATACTaGCACTTCCTGTGGCCAGAGTCTCTGCAGGCGTCA +
Preference number: 6 (lower is better)
Translates to: LLGTIHSCTKGY*HFLWPESLQAS
Trigger: TGACGCCTGCAGAGACTCTGGCCACAGGAAGTGTCAGTATCCTTTGGTGCAGCTGTGAATGGTGCCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 72 bp CTGCAAGGAGCTGACCTGAGGACCCGTGACAGGCACTaGAGTGATCGTTCCCAAAGCTTGTTTGTCGCTGAG +
Preference number: 6 (lower is better)
Translates to: LQGADLRTRDRH*SDRSQSLFVAE
Trigger: CTCAGCGACAAACAAGCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000420689.1
ENST00000490679.5
ENST00000629843.2
CDS CAA 72 bp TCGTGGGTGATCTCGTTCTTCCAGCAGGGGTCCTCATaGGCTCTCGCTGTGAGGAACAGGGGGTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: SWVISFFQQGSS*ALAVRNRGLLR
Trigger: TCTCAACAACCCCCTGTTCCTCACAGCGAGAGCCAATGAGGACCCCTGCTGGAAGAACGAGATCACCCACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000629843.2
CDS CAA 72 bp TGCAGTGATCGTTCCCAAAGCCCCGTGCTGGGTCCCTaGTGCACAGATGAGAGGTTCTGCCCGCGATTTGTT +
Preference number: 6 (lower is better)
Translates to: CSDRSQSPVLGP*CTDERFCPRFV
Trigger: AACAAATCGCGGGCAGAACCTCTCATCTGTGCACAAGGGACCCAGCACGGGGCTTTGGGAACGATCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403565.5
ENST00000474327.5
CDS GCA 72 bp AGTGATCGTTCCCAAAGCCCCGTGCTGGGTCCCTTGTaGACAGATGAGAGGTTCTGCCCGCGATTTGTTTGT +
Preference number: 6 (lower is better)
Translates to: SDRSQSPVLGPL*TDERFCPRFVC
Trigger: ACAAACAAATCGCGGGCAGAACCTCTCATCTGTGCACAAGGGACCCAGCACGGGGCTTTGGGAACGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403565.5
ENST00000474327.5
CDS GCA 72 bp CCAAAGGATACTGACACTTCCTGTGGCCAGAGTCTCTaGAGGCGTCACTGCTTCGTGGAGCTCACTGGCATA +
Preference number: 6 (lower is better)
Translates to: PKDTDTSCGQSL*RRHCFVELTGI
Trigger: TATGCCAGTGAGCTCCACGAAGCAGTGACGCCTGCAGAGACTCTGGCCACAGGAAGTGTCAGTATCCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS CCA 72 bp AATGCGCCCTTCAGGCACTACAAGACGCTCAGCTCCTaGGCACCATTCACAGCTGCACCAAAGGATACTGAC +
Preference number: 6 (lower is better)
Translates to: NAPFRHYKTLSS*APFTAAPKDTD
Trigger: GTCAGTATCCTTTGGTGCAGCTGTGAATGGTGCCCAGGAGCTGAGCGTCTTGTAGTGCCTGAAGGGCGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS CCA 72 bp GCAGCCTGGTCAGGAGACCTCAGGGAACTCTTCACATaGATGTTCCTCAAACCCCGGACTCAAGGAACAAGT +
Preference number: 6 (lower is better)
Translates to: AAWSGDLRELFT*MFLKPRTQGTS
Trigger: ACTTGTTCCTTGAGTCCGGGGTTTGAGGAACATCCATGTGAAGAGTTCCCTGAGGTCTCCTGACCAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS TCA 72 bp TCTCTTTCTGCTTCTCCATGGAGAGCCACGTGGAGCTaGATCAGGAACTTTCTCCAACCACTGAGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: SLSASPWRATWS*IRNFLQPLSPL
Trigger: CAGGGGACTCAGTGGTTGGAGAAAGTTCCTGATTCAGCTCCACGTGGCTCTCCATGGAGAAGCAGAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS CAA 72 bp GGGTTGGCTGTGCTTCTTCTCTTCCGCTCCTGTCGCTaGCTCTGGATTTCTTCCAAATGTTCCGTGGTAACC +
Preference number: 6 (lower is better)
Translates to: GLAVLLLFRSCR*LWISSKCSVVT
Trigger: GGTTACCACGGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAAGAGAAGAAGCACAGCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313237.10
ENST00000396103.7
ENST00000403565.5
ENST00000414269.1
ENST00000629843.2
CDS CAA 90 bp GGCGTGAGTGACTCTGAAGCCCTCCTCTCACCTGACAAGGTATCTTaGGGTTTTCTCCGTCCTCCCTTGAATTCTTTCTGCCATGTGTTT +
Preference number: 6 (lower is better)
Translates to: GVSDSEALLSPDKVS*GFLRPPLNSFCHVF
Trigger: AAACACATGGCAGAAAGAATTCAAGGGAGGACGGAGAAAACCCAAAGATACCTTGTCAGGTGAGAGGAGGGCTTCAGAGTCACTCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS GCA 72 bp CCTCAATGCCTCTGCAAGAAAACACGATTCTCTTTCTaGTTCTCCATGGAGAGCCACGTGGAGCTGAATCAG +
Preference number: 6 (lower is better)
Translates to: PQCLCKKTRFSF*FSMESHVELNQ
Trigger: CTGATTCAGCTCCACGTGGCTCTCCATGGAGAAGCAGAAAGAGAATCGTGTTTTCTTGCAGAGGCATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460507.5
CDS CCA 72 bp GAGAAGGGCTCTAGGAAGCTGCCTCCAATCTCAGCTTaGCCTCCTCCAAAGAAAACGCTGGATTTTATTTGT +
Preference number: 6 (lower is better)
Translates to: EKGSRKLPPISA*PPPKKTLDFIC
Trigger: ACAAATAAAATCCAGCGTTTTCTTTGGAGGAGGCCAAGCTGAGATTGGAGGCAGCTTCCTAGAGCCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495348.1
CDS TCA 72 bp CGCCTCAAAATGCAAATTCTCAGGCCCACCCAAGAGTaGTTAAATCTAAAACCCTGGGAGGAAAGGCTCAAT +
Preference number: 6 (lower is better)
Translates to: RLKMQILRPTQE*LNLKPWEERLN
Trigger: ATTGAGCCTTTCCTCCCAGGGTTTTAGATTTAATCACTCTTGGGTGGGCCTGAGAATTTGCATTTTGAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462631.1
CDS TCA 72 bp CTGACAAGGTATCTTTGGGTTTTCTCCGTCCTCCCTTaGATTCTTTCTGCCATGTGTTTTTCAGATGATAAA +
Preference number: 6 (lower is better)
Translates to: LTRYLWVFSVLP*ILSAMCFSDDK
Trigger: TTTATCATCTGAAAAACACATGGCAGAAAGAATTCAAGGGAGGACGGAGAAAACCCAAAGATACCTTGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462631.1