RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF20L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129292

Ensembl transcript IDs: ENST00000220847.8, ENST00000315808.14, ENST00000337920.8, ENST00000361997.9, ENST00000395374.1, ENST00000395376.5, ENST00000395379.5, ENST00000395383.5, ENST00000395386.7, ENST00000395390.6, ENST00000460236.5, ENST00000469979.6, ENST00000477051.1, ENST00000485595.5, ENST00000486199.5, ENST00000493126.1, ENST00000521038.5, ENST00000522253.1, ENST00000522580.5, ENST00000622263.4

Found 708 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCTGACCTGGTGGGTCCCGGCAGATATAGCAGATGTACTGCTCTaGAATGCTCTCCTCCAGCAGCCCCATGCACACGCTGTGTTGCCA +
Preference number: 1 (lower is better)
Translates to: PLTWWVPADIADVLL*NALLQQPHAHAVLP
Trigger: TGGCAACACAGCGTGTGCATGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGCTATATCTGCCGGGACCCACCAGGTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR CCA 90 bp ACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTaGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACA +
Preference number: 1 (lower is better)
Translates to: TCVCSTGGTYNSHEY*QTVGPRLKIQQELT
Trigger: TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR CCA 90 bp GCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTaGCGTTTAAGTTGGGGCAATCTTGCAAGAGGATCTGGTGGCTCC +
Preference number: 1 (lower is better)
Translates to: AICCTLPMSIRSCFM*RLSWGNLARGSGGS
Trigger: GGAGCCACCAGATCCTCTTGCAAGATTGCCCCAACTTAAACGCCACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR CCA 90 bp TGGAAGAAGGATTTGGAAGCATCTGTGTATCCTCTTTTTCTGCCCTaGGACATTCATTACGGTAAGAGGAATCTGAGGCTACCGGTGCTG +
Preference number: 1 (lower is better)
Translates to: WKKDLEASVYPLFLP*DIHYGKRNLRLPVL
Trigger: CAGCACCGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGGATACACAGATGCTTCCAAATCCTTCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR TCA 90 bp TCGTTCTGCACATTTTCTATGTGTGTAAGGAGATTGAGCTGCCACTaGAGATGTGAGTCTCCTGGGTCTTCGGTGCCCTTTTTATCATTA +
Preference number: 1 (lower is better)
Translates to: SFCTFSMCVRRLSCH*RCESPGSSVPFLSL
Trigger: TAATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCTCCTTACACACATAGAAAATGTGCAGAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR GCA 90 bp ACGTTGAGTGTTTGTTTAAAACAAGCATACACACTTACGCATACCTaGGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGG +
Preference number: 1 (lower is better)
Translates to: TLSVCLKQAYTLTHT*VCSTGGTYNSHEYW
Trigger: CCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTATGCTTGTTTTAAACAAACACTCAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR TCA 90 bp GTGGAATTCTTGTTCTTCTTCCAAACTACTAACATCATCATCATCTaGGCTCCCAGGGTCTGCGAGAGATTTACAGTCCTGACCAAAACT +
Preference number: 1 (lower is better)
Translates to: VEFLFFFQTTNIIII*APRVCERFTVLTKT
Trigger: AGTTTTGGTCAGGACTGTAAATCTCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTAGTTTGGAAGAAGAACAAGAATTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR TCA 90 bp TCCACCCAAGATTCTCCTTCCAATGCTTACCATCCATTCTTGCTTTaGGCAGTGACAAAGCATACAATACACTGCTTCCATCACATGACT +
Preference number: 1 (lower is better)
Translates to: STQDSPSNAYHPFLL*AVTKHTIHCFHHMT
Trigger: AGTCATGTGATGGAAGCAGTGTATTGTATGCTTTGTCACTGCTCAAAGCAAGAATGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR CCA 90 bp GCTCCCAGGGTCTGCGAGAGATTTACAGTCCTGACCAAAACTTTGTaGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCAT +
Preference number: 1 (lower is better)
Translates to: APRVCERFTVLTKTL*LLIAMLTCYISSFH
Trigger: ATGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTCGCAGACCCTGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR TCA 90 bp CACATTTTCTATGTGTGTAAGGAGATTGAGCTGCCACTGAAGATGTaGGTCTCCTGGGTCTTCGGTGCCCTTTTTATCATTATAAACAAA +
Preference number: 1 (lower is better)
Translates to: HIFYVCKEIELPLKM*VSWVFGALFIIINK
Trigger: TTTGTTTATAATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCTCCTTACACACATAGAAAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR GCA 90 bp TCATTAAGTGTTCACTGTTGTCATACAGAGCAAAGAGTTGCTATCTaGTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTGGCGT +
Preference number: 1 (lower is better)
Translates to: SLSVHCCHTEQRVAI*CTLPMSIRSCFMWR
Trigger: ACGCCACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTATGACAACAGTGAACACTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR GCA 90 bp TACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATaGTCATTCTGTTCTGCCTGGTGGCAAATAAAACATTGTCTTTTC +
Preference number: 1 (lower is better)
Translates to: YKFISNIPRGSLLYQ*SFCSAWWQIKHCLF
Trigger: GAAAAGACAATGTTTTATTTGCCACCAGGCAGAACAGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR GCA 90 bp AAATGGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATaGTTACCATCCATTCTTGCTTTGAGCAGTGACAAAGCATACAAT +
Preference number: 1 (lower is better)
Translates to: KWNCGFYLHPRFSFQ*LPSILALSSDKAYN
Trigger: ATTGTATGCTTTGTCACTGCTCAAAGCAAGAATGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR TCA 90 bp TTCATTAAGAGCATCATCCTCATCCTGAGATTCCTCAAAATTGGTTaGATCAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACT +
Preference number: 1 (lower is better)
Translates to: FIKSIILILRFLKIG*IKVLIVFIPTQKQT
Trigger: AGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTGATTCAACCAATTTTGAGGAATCTCAGGATGAGGATGATGCTCTTAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR TCA 90 bp TCCAGGCCTTCAAATTTTGGAGACAAAGGCTTTAATGCCAGTCTATaGAATCAAACACTAATGAAGTCTGTAGTTATCTGTATACCTTGG +
Preference number: 1 (lower is better)
Translates to: SRPSNFGDKGFNASL*NQTLMKSVVICIPW
Trigger: CCAAGGTATACAGATAACTACAGACTTCATTAGTGTTTGATTTCATAGACTGGCATTAAAGCCTTTGTCTCCAAAATTTGAAGGCCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
3UTR TCA 90 bp GTCAGTTTTCTGATTGAGAACATTCATCGCCCAAGAAACAGCTCATaGTCCTTTAAAAGTTTAAATACCCTAAATTTCCGTACAGCTGGA +
Preference number: 1 (lower is better)
Translates to: VSFLIENIHRPRNSS*SFKSLNTLNFRTAG
Trigger: TCCAGCTGTACGGAAATTTAGGGTATTTAAACTTTTAAAGGATCATGAGCTGTTTCTTGGGCGATGAATGTTCTCAATCAGAAAACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp TCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAATGTGCAACATCAGGCAACAGTGCAGGTTTCTaGGTGTTGGCAGAACTGCTA +
Preference number: 2 (lower is better)
Translates to: SRGRQGPSFSSGKCATSGNSAGF*VLAELL
Trigger: TAGCAGTTCTGCCAACACTCAGAAACCTGCACTGTT...GCCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR-3UTR TCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCTTTGCACTCCACCTCTaGCCTGGTGGGTCCCGGCAG +
Preference number: 2 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLIFALHL*PGGSRQ
Trigger: CTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAA...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp TGCTTCCATCACATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGTTACACGATCCAGCTaGGTCGATAGGACAACACCA +
Preference number: 2 (lower is better)
Translates to: CFHHMTQRALSETAYRVSVTRSS*VDRTTP
Trigger: TGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAAC...TGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCATGTGATGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR CCA 90 bp TGCTTCCATCACATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCATCACTTCCCATAGACTaGTTACACGATCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: CFHHMTQRALSETAYRVSSLPID*LHDPAG
Trigger: CCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGA...TGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCATGTGATGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR TCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGGATACTAGAGCTCCGTaGTCATTCCAGTGGGAACCT +
Preference number: 2 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGDTRAP*SFQWEP
Trigger: AGGTTCCCACTGGAATGATCACGGAGCTCTAGTATC...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
3UTR-3UTR TCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACATTTCCAGCAGAATCATaGTCACTTGGCACATCGGAC +
Preference number: 2 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTFPAES*SLGTSD
Trigger: GTCCGATGTGCCAAGTGATCATGATTCTGCTGGAAA...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTTTCCAGCAGAATCATaGTCACTTGGCACATCGGAC +
Preference number: 2 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHFPAES*SLGTSD
Trigger: GTCCGATGTGCCAAGTGATCATGATTCTGCTGGAAA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCTTCACACTGGATCATaGAGCCATTCTCCTCATCCA +
Preference number: 2 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHLHTGS*SHSPHP
Trigger: TGGATGAGGAGAATGGCTTCATGATCCAGTGTGAAG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATTCTTTTCTCTTACCTaGCCAGAGTGGATGGGTTCA +
Preference number: 2 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVFFSLT*PEWMGS
Trigger: TGAACCCATCCACTCTGGGCAGGTAAGAGAAAAGAA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR GCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAATGCACACGCTGTGTTaGCAACACAAGCACTCTTCA +
Preference number: 2 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTMHTLC*QHKHSS
Trigger: TGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCAT...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp AGGTCCATCCTGCTGGTAACTTCGTTCTGCACATTTTCTATGTGTGTAAGGAGAGCAGATGTACTGCTCTaGAATGCTCTCCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RSILLVTSFCTFSMCVRRADVLL*NALLQQ
Trigger: CTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGC...TCTCCTTACACACATAGAAAATGTGCAGAACGAAGTTACCAGCAGGATGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATGTCAGTTTTCTGATTaGGAACATTCATCGCCCAAG +
Preference number: 2 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVCQFSD*EHSSPK
Trigger: CTTGGGCGATGAATGTTCTCAATCAGAAAACTGACA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACTACTGTCAGTTTTCTaGTTGAGAACATTCATCGCC +
Preference number: 2 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVLLSVF*LRTFIA
Trigger: GGCGATGAATGTTCTCAATCAGAAAACTGACAGTAG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp CCTCTTTTTCTGCCCTGGGACATTCATTACGGTAAGAGGAATCTGAGGCTACCGACTGAAGAAGAAAGCTaGGATACAAGCGTCAAATCC +
Preference number: 2 (lower is better)
Translates to: PLFLPWDIHYGKRNLRLPTEEES*DTSVKS
Trigger: GGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGT...CGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR-3UTR GCA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCACACCAGCTTAGTGGATaGTGGGATTTCACCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPHQLSG*WDFTWN
Trigger: GTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTG...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR TCA 90 bp GCTGCCACTGAAGATGTGAGTCTCCTGGGTCTTCGGTGCCCTTTTTATCATTATCTACTGTCAGTTTTCTaGTTGAGAACATTCATCGCC +
Preference number: 2 (lower is better)
Translates to: AATEDVSLLGLRCPFYHYLLSVF*LRTFIA
Trigger: GGCGATGAATGTTCTCAATCAGAAAACTGACAGTAG...ATAATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAACTCCTCATCCCAGCTaGGGTTATTTACAATGTATT +
Preference number: 2 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVTPHPS*GYLQCI
Trigger: AATACATTGTAAATAACCTCAGCTGGGATGAGGAGT...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTCCTGCCCAGAGTGGATaGGTTCAATTAAACTGTTCA +
Preference number: 2 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPPAQSG*VQLNCS
Trigger: TGAACAGTTTAATTGAACCCATCCACTCTGGGCAGG...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR CAA 90 bp CTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCATTCTTGCTTaGAGCAGTGACAAAGCATACAATACACTGCTTCCATCACATGAC +
Preference number: 2 (lower is better)
Translates to: LHPRFSFQCLPSILA*SSDKAYNTLLPSHD
Trigger: GTCATGTGATGGAAGCAGTGTATTGTATGCTTTGTCACTGCTCAAAGCAAGAATGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR TCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTCCTATTCCCATATCTaGTCAAAAGGGGAATTTCAA +
Preference number: 2 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFSYSHI*SKGEFQ
Trigger: TTGAAATTCCCCTTTTGATCAGATATGGGAATAGGA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
3UTR-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTGTTTTCCCCAGAAGTaGGATTTCTACTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHCFPQK*DFYCQF
Trigger: AAACTGACAGTAGAAATCTCACTTCTGGGGAAAACA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp GCACACGCTGTGTTGCCAACACAAGCACTCTTCACACTGGATCATGAAGCCATTACTGTCTTCATAGTCTaGATAGTCATGTTGCTTAGA +
Preference number: 2 (lower is better)
Translates to: AHAVLPTQALFTLDHEAITVFIV*IVMLLR
Trigger: TCTAAGCAACATGACTATTCAGACTATGAAGACAGT...AATGGCTTCATGATCCAGTGTGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTAACATCATCATCATCTaGGCTCCCAGGGTCTGCGAG +
Preference number: 2 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCNIIII*APRVCE
Trigger: CTCGCAGACCCTGGGAGCTCAGATGATGATGATGTT...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAACACTTACGCATACCTaGGTATGTAGCACTGGGGGC +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDETLTHT*VCSTGG
Trigger: GCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATGTACTGCTCTGGAATaGTCTCCTCCAGCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: PSASQFVFNELNACNIFQCTALE*SPPAAP
Trigger: TGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAACTCACATGAGTACTaGCAGACAGTAGGACCTAGG +
Preference number: 2 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAINSHEY*QTVGPR
Trigger: CCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATGATACTAGAGCTCCGTaGTCATTCCAGTGGGAACCT +
Preference number: 2 (lower is better)
Translates to: TQVPDLSHSENTINSGENDTRAP*SFQWEP
Trigger: AGGTTCCCACTGGAATGATCACGGAGCTCTAGTATC...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
3UTR-3UTR TCA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATTTCCAGCAGAATCATaGTCACTTGGCACATCGGAC +
Preference number: 2 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQFPAES*SLGTSD
Trigger: GTCCGATGTGCCAAGTGATCATGATTCTGCTGGAAA...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTGGTCTTCTGTGTGTGTaGCAAGAATCTAGGCAACAC +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSGLLCV*QESRQH
Trigger: GTGTTGCCTAGATTCTTGTCACACACACAGAAGACC...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp AGGTCCATCCTGCTGGTAACTTCGTTCTGCACATTTTCTATGTGTGTAAGGAGAACCCCAGCTATTATTTaGTCTTGGTCTTTTCGCTTC +
Preference number: 2 (lower is better)
Translates to: RSILLVTSFCTFSMCVRRTPAII*SWSFRF
Trigger: GAAGCGAAAAGACCAAGATCAAATAATAGCTGGGGT...TCTCCTTACACACATAGAAAATGTGCAGAACGAAGTTACCAGCAGGATGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTTTTTCTTTCCAAGGTaGCATCCTATTGACATCACA +
Preference number: 2 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHFFFPR*HPIDIT
Trigger: TGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTAGAATCATGATCACTTaGCACATCGGACCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSRIMIT*HIGPFC
Trigger: GCAGAAGGGTCCGATGTGCCAAGTGATCATGATTCT...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp CAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTGATCTTACCTGCCCAGAGTaGATGGGTTCAATTAAACTG +
Preference number: 2 (lower is better)
Translates to: QSGWVQLNCSCHDSGSPDLTCPE*MGSIKL
Trigger: CAGTTTAATTGAACCCATCCACTCTGGGCAGGTAAG...ATCAGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR-3UTR CCA 90 bp CAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCAACTCCACCTCTGACCTaGTGGGTCCCGGCAGATATA +
Preference number: 2 (lower is better)
Translates to: QNFVAFDSYAHLLYKFLPTPPLT*WVPADI
Trigger: TATATCTGCCGGGACCCACCAGGTCAGAGGTGGAGT...TGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTTTGGAAGAAGGATTTaGAAGCATCTGTGTATCCTC +
Preference number: 2 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPFGRRI*KHLCIL
Trigger: GAGGATACACAGATGCTTCCAAATCCTTCTTCCAAA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR CAA 90 bp GTTCACTGTTGTCATACAGAGCAAAGAGTTGCTATCTGCTGTACTTaGCCCATGTCAATTAGGAGCTGTTTTATGTGGCGTTTAAGTTGG +
Preference number: 2 (lower is better)
Translates to: VHCCHTEQRVAICCT*PMSIRSCFMWRLSW
Trigger: CCAACTTAAACGCCACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTATGACAACAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGAAGGTGCCATCCTATTaGCATCACAAATCAGTGAAT +
Preference number: 2 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVKVPSY*HHKSVN
Trigger: ATTCACTGATTTGTGATGTCAATAGGATGGCACCTT...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGTTTCTACAGGTATCTTaGGCTTCACGTAAGCAACTA +
Preference number: 2 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVFLQVS*ASRKQL
Trigger: TAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAA...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAGGTCTTCTGTGTGTGTaGCAAGAATCTAGGCAACAC +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEGLLCV*QESRQH
Trigger: GTGTTGCCTAGATTCTTGTCACACACACAGAAGACC...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACGTAAACATGCTTCGTaGAGCCAGAGAACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PSASQFVFNELNACNIFQRKHAS*SQRTPR
Trigger: TCTGGGAGTTCTCTGGCTTCACGAAGCATGTTTACG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCGCTTATACCCTGGGATaGCTGTCTCCAGGCCTTCAA +
Preference number: 2 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGAYTLG*LSPGLQ
Trigger: TTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGC...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
3UTR-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGTTGAGCCTGAATACTaGCATTCAACTATATATATG +
Preference number: 2 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHVEPEY*HSTIYM
Trigger: CATATATATAGTTGAATGGCAGTATTCAGGCTCAAC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR GCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTATCATAACGATATTTTaGACTCCACCTCTGACCTGG +
Preference number: 2 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIIITIF*TPPLTW
Trigger: CCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGAT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR GCA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCAAAGCATACAATACACTaGTTCCATCACATGACTCAG +
Preference number: 2 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPKHTIH*FHHMTQ
Trigger: CTGAGTCATGTGATGGAAGCAGTGTATTGTATGCTT...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGAGGTTTTGGATGGACTaGTGGCATTATGTAAGACTT +
Preference number: 2 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVRFWMD*WHYVRL
Trigger: AAGTCTTACATAATGCCACCAGTCCATCCAAAACCT...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTAACTCACATGAGTACTaGCAGACAGTAGGACCTAGG +
Preference number: 2 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCNSHEY*QTVGPR
Trigger: CCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTT...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCGCCTGCTCCAGCATTaGAGCTGTTTCATTGTAGTC +
Preference number: 2 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYRLLQH*SCFIVV
Trigger: GACTACAATGAAACAGCTCCAATGCTGGAGCAGGCG...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR CAA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTaGAAGAATCATCTAGGAAGTCTACATCTGATAAGTTTTCACCAC +
Preference number: 2 (lower is better)
Translates to: QSPDCIHPHSEANSP*KNHLGSLHLISFHH
Trigger: GTGGTGAAAACTTATCAGATGTAGACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTTTCTACAGGTATCTTaGGCTTCACGTAAGCAACTA +
Preference number: 2 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIFLQVS*ASRKQL
Trigger: TAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTGTCAGTTTTCTGATTaGGAACATTCATCGCCCAAG +
Preference number: 2 (lower is better)
Translates to: IRKAQRTTCERLQSIGILCQFSD*EHSSPK
Trigger: CTTGGGCGATGAATGTTCTCAATCAGAAAACTGACA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCTACTGTCAGTTTTCTaGTTGAGAACATTCATCGCC +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSLLSVF*LRTFIA
Trigger: GGCGATGAATGTTCTCAATCAGAAAACTGACAGTAG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTACATCAGCAAGCAGGTaGTGTGTAGAAACTATCTTT +
Preference number: 2 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAITSASR*CVETIF
Trigger: AAAGATAGTTTCTACACATCACCTGCTTGCTGATGT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp TTATCACTGAAGAAGAAAGCTGAGATACAAGCGTCAAATCCTCGACTTGTATTAACTTTGAGGTTTAGGTaGAATCGCCTGCTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: LSLKKKAEIQASNPRLVLTLRFR*NRLLQH
Trigger: ATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGT...TAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR-3UTR TCA 90 bp AGCACTAAATGTTTACACTTGACTGAAGCTGACCAGGTAATTTCAATACATTTCTCAGAGAGCCCTATCTaGAACAGCCTACAGAGTGTC +
Preference number: 2 (lower is better)
Translates to: STKCLHLTEADQVISIHFSESPI*NSLQSV
Trigger: GACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGA...GAAATGTATTGAAATTACCTGGTCAGCTTCAGTCAAGTGTAAACATTTAGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR TCA 90 bp AGCACTAAATGTTTACACTTGACTGAAGCTGACCAGGTAATTTCAATACATTTCACTGCTTCCATCACATaGCTCAGAGAGCCCTATCTG +
Preference number: 2 (lower is better)
Translates to: STKCLHLTEADQVISIHFTASIT*LREPYL
Trigger: CAGATAGGGCTCTCTGAGTCATGTGATGGAAGCAGT...GAAATGTATTGAAATTACCTGGTCAGCTTCAGTCAAGTGTAAACATTTAGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR GCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATTTAGGTGAAATCGCCTaGTCCAGCATTGGAGCTGTT +
Preference number: 2 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYLGEIA*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGCGATTTCACCTAA...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR-3UTR CCA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTCTTACCTGCCCAGAGTaGATGGGTTCAATTAAACTG +
Preference number: 2 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCLTCPE*MGSIKL
Trigger: CAGTTTAATTGAACCCATCCACTCTGGGCAGGTAAG...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp AATACATTTCAGAATGACAGTTTTCACCGCATGGTATGGAACAAATACGTAGCACAGCTTAGTGGATGCTaGGATTTCACCTGGAACAGA +
Preference number: 2 (lower is better)
Translates to: NTFQNDSFHRMVWNKYVAQLSGC*DFTWNR
Trigger: TCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTG...TGCTACGTATTTGTTCCATACCATGCGGTGAAAACTGTCATTCTGAAATGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR TCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATGACTTAACCGTTGGATaGTCACAGAAAATCAGAAGG +
Preference number: 2 (lower is better)
Translates to: TQVPDLSHSENTINSGENDLTVG*SQKIRR
Trigger: CCTTCTGATTTTCTGTGATCATCCAACGGTTAAGTC...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
3UTR-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTCACAAATCAGTGAATaGCCAGACATTACTAAGCTT +
Preference number: 2 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAISQISE*PDITKL
Trigger: AAGCTTAGTAATGTCTGGTCATTCACTGATTTGTGA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAAAGGTGCCATCCTATTaGCATCACAAATCAGTGAAT +
Preference number: 2 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEKVPSY*HHKSVN
Trigger: ATTCACTGATTTGTGATGTCAATAGGATGGCACCTT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR TCA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATTTCTACAGGTATCTTaGGCTTCACGTAAGCAACTA +
Preference number: 2 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQFLQVS*ASRKQL
Trigger: TAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAA...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATGTCAGTTTTCTGATTaGGAACATTCATCGCCCAAG +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDECQFSD*EHSSPK
Trigger: CTTGGGCGATGAATGTTCTCAATCAGAAAACTGACA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTGTTTTCCCCAGAAGTaGGATTTCTACTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSCFPQK*DFYCQF
Trigger: AAACTGACAGTAGAAATCTCACTTCTGGGGAAAACA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCAGGAATCAAGAGGATaGATGTTACTAGGTACAAAG +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSQESRG*MLLGTK
Trigger: CTTTGTACCTAGTAACATTCATCCTCTTGATTCCTG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR GCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTTTTTCTTTCCAAGGTaGCATCCTATTGACATCACA +
Preference number: 2 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIFFFPR*HPIDIT
Trigger: TGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR GCA 90 bp AATACATTTCAGAATGACAGTTTTCACCGCATGGTATGGAACAAATACGTAGCAGCTTCCTTTTCTTGCTaGTATTTGGGGCTATCAGCA +
Preference number: 2 (lower is better)
Translates to: NTFQNDSFHRMVWNKYVAASFSC*YLGLSA
Trigger: TGCTGATAGCCCCAAATAGCAGCAAGAAAAGGAAGC...TGCTACGTATTTGTTCCATACCATGCGGTGAAAACTGTCATTCTGAAATGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR CCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTTTTGGATGGACTGGTaGCATTATGTAAGACTTAGG +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSFWMDW*HYVRLR
Trigger: CCTAAGTCTTACATAATGCCACCAGTCCATCCAAAA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCTGTCTGTTGATCTTTaGCACATTTGTCAAGTTGGA +
Preference number: 2 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSLSVDL*HICQVG
Trigger: TCCAACTTGACAAATGTGCCAAAGATCAACAGACAG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGAATTTACTCCACACATaGAATACAGGCACTACTTTT +
Preference number: 2 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVNLLHT*NTGTTF
Trigger: AAAAGTAGTGCCTGTATTCCATGTGTGGAGTAAATT...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATAAGCACTCTTCACACTaGATCATGAAGCCATTCTCC +
Preference number: 2 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYKHSSH*IMKPFS
Trigger: GGAGAATGGCTTCATGATCCAGTGTGAAGAGTGCTT...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAACTCCTCATCCCAGCTaGGGTTATTTACAATGTATT +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDETPHPS*GYLQCI
Trigger: AATACATTGTAAATAACCTCAGCTGGGATGAGGAGT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTTATGTACAAGTATTGTaGGAATCTGAAGGTAGCCAA +
Preference number: 2 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPYVQVL*ESEGSQ
Trigger: TTGGCTACCTTCAGATTCCCACAATACTTGTACATA...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
3UTR-3UTR CCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATTTTGGATGGACTGGTaGCATTATGTAAGACTTAGG +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEFWMDW*HYVRLR
Trigger: CCTAAGTCTTACATAATGCCACCAGTCCATCCAAAA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CCA 90 bp CAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCACCTGCCCAGAGTGGATaGGTTCAATTAAACTGTTCA +
Preference number: 2 (lower is better)
Translates to: QNFVAFDSYAHLLYKFLPPAQSG*VQLNCS
Trigger: TGAACAGTTTAATTGAACCCATCCACTCTGGGCAGG...TGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTTCTTCTTCTGTTTTaGTCTGTAGTGATCTTTGTC +
Preference number: 2 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGELLLLF*SVVIFV
Trigger: GACAAAGATCACTACAGACCAAAACAGAAGAAGAAG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATGTTTTCCCCAGAAGTaGGATTTCTACTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: PSASQFVFNELNACNIFQCFPQK*DFYCQF
Trigger: AAACTGACAGTAGAAATCTCACTTCTGGGGAAAACA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATTTTTCTTTCCAAGGTaGCATCCTATTGACATCACA +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEFFFPR*HPIDIT
Trigger: TGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR GCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCCCAACAGCTTTGGATaGCAACAAACCAATAAAGTT +
Preference number: 2 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYPNSFG*QQTNKV
Trigger: AACTTTATTGGTTTGTTGGCATCCAAAGCTGTTGGG...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR-3UTR CCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAGTGATATATAGGTTTTaGATGGACTGGTGGCATTAT +
Preference number: 2 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEVIYRF*MDWWHY
Trigger: ATAATGCCACCAGTCCATCCAAAACCTATATATCAC...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR GCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATAGTTATGGCTATTACTaGGTTCTTATAGTCTTACAG +
Preference number: 2 (lower is better)
Translates to: TQVPDLSHSENTINSGENSYGYY*VLIVLQ
Trigger: CTGTAAGACTATAAGAACGCAGTAATAGCCATAACT...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
3UTR-3UTR GCA 90 bp AGCACTAAATGTTTACACTTGACTGAAGCTGACCAGGTAATTTCAATACATTTCAGATTCTCCTTCCAATaGTTACCATCCATTCTTGCT +
Preference number: 2 (lower is better)
Translates to: STKCLHLTEADQVISIHFRFSFQ*LPSILA
Trigger: AGCAAGAATGGATGGTAAGCATTGGAAGGAGAATCT...GAAATGTATTGAAATTACCTGGTCAGCTTCAGTCAAGTGTAAACATTTAGTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR CCA 72 bp TGGTGGGTCCCGGCAGATATAGCAGATGTACTGCTCTaGAATGCTCTCCTCCAGCAGCCCCATGCACACGCT +
Preference number: 3 (lower is better)
Translates to: WWVPADIADVLL*NALLQQPHAHA
Trigger: AGCGTGTGCATGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGCTATATCTGCCGGGACCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR GCA 72 bp TGTACTGCTCTGGAATGCTCTCCTCCAGCAGCCCCATaGACACGCTGTGTTGCCAACACAAGCACTCTTCAC +
Preference number: 3 (lower is better)
Translates to: CTALECSPPAAP*TRCVANTSTLH
Trigger: GTGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACATGCACACGCTGTGTaGCCAACACAAGCACTCTTC +
Preference number: 3 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVHAHAV*PTQALF
Trigger: GAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR CCA 72 bp TGTAGCACTGGGGGCACATACAACTCACATGAGTACTaGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAA +
Preference number: 3 (lower is better)
Translates to: CSTGGTYNSHEY*QTVGPRLKIQQ
Trigger: TTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCAGAATCATGATCACTaGGCACATCGGACCCTTCTG +
Preference number: 3 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHQNHDH*AHRTLL
Trigger: CAGAAGGGTCCGATGTGCCAAGTGATCATGATTCTG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp CCTCTTTTTCTGCCCTGGGACATTCATTACGGTAAGAGGAATCTGAGGCTACCGTCTCCAGATTCATGTTaGCATTTCTTGCTGCGAGCC +
Preference number: 3 (lower is better)
Translates to: PLFLPWDIHYGKRNLRLPSPDSC*HFLLRA
Trigger: GGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGA...CGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR GCA 72 bp CCCATTATTCAACCACTCCTTATCATAACGATATTTTaGACTCCACCTCTGACCTGGTGGGTCCCGGCAGAT +
Preference number: 3 (lower is better)
Translates to: PIIQPLLIITIF*TPPLTWWVPAD
Trigger: ATCTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGCAGAATCATGATCACTaGGCACATCGGACCCTTCTG +
Preference number: 3 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVQNHDH*AHRTLL
Trigger: CAGAAGGGTCCGATGTGCCAAGTGATCATGATTCTG...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAGGATCAAACTGTACGTaGAGCCTGAATACTGCCATT +
Preference number: 3 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTGSNCT*SLNTAI
Trigger: AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCC...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR TCA 72 bp ACATTTTCTATGTGTGTAAGGAGATTGAGCTGCCACTaGAGATGTGAGTCTCCTGGGTCTTCGGTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: TFSMCVRRLSCH*RCESPGSSVPF
Trigger: AAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCTCCTTACACACATAGAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCAAGGTGCCATCCTATaGACATCACAAATCAGTGAA +
Preference number: 3 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHQGAIL*TSQISE
Trigger: TTCACTGATTTGTGATGTCAATAGGATGGCACCTTG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACAAGGTGCCATCCTATaGACATCACAAATCAGTGAA +
Preference number: 3 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTQGAIL*TSQISE
Trigger: TTCACTGATTTGTGATGTCAATAGGATGGCACCTTG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATAGCTATTATTTGATCTaGGTCTTTTCGCTTCCCGGA +
Preference number: 3 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHSYYLI*VFSLPG
Trigger: TCCGGGAAGCGAAAAGACCAAGATCAAATAATAGCT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGTCCTGACCAAAACTTaGTGGCTTTTGATAGCTATG +
Preference number: 3 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHVLTKT*WLLIAM
Trigger: CATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGAC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR TCA 72 bp TATGTGTGTAAGGAGATTGAGCTGCCACTGAAGATGTaGGTCTCCTGGGTCTTCGGTGCCCTTTTTATCATT +
Preference number: 3 (lower is better)
Translates to: YVCKEIELPLKM*VSWVFGALFII
Trigger: AATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCTCCTTACACACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR CCA 72 bp ATGTCAATTAGGAGCTGTTTTATGTGGCGTTTAAGTTaGGGCAATCTTGCAAGAGGATCTGGTGGCTCCAAC +
Preference number: 3 (lower is better)
Translates to: MSIRSCFMWRLS*GNLARGSGGSN
Trigger: GTTGGAGCCACCAGATCCTCTTGCAAGATTGCCCCAACTTAAACGCCACATAAAACAGCTCCTAATTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGCCAGGCCTTCAAATTTaGGAGACAAAGGCTTTAATG +
Preference number: 3 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGPGLQI*ETKALM
Trigger: CATTAAAGCCTTTGTCTCCAAAATTTGAAGGCCTGG...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
3UTR-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCAAGGTGCCATCCTATaGACATCACAAATCAGTGAA +
Preference number: 3 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYQGAIL*TSQISE
Trigger: TTCACTGATTTGTGATGTCAATAGGATGGCACCTTG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGGATCAAACTGTACGTaGAGCCTGAATACTGCCATT +
Preference number: 3 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVGSNCT*SLNTAI
Trigger: AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCTTCTGCAAGCCAGTTaGTTTTTAATGAGCTTAATG +
Preference number: 3 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHLLQAS*FLMSLM
Trigger: CATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR TCA 72 bp CCTGAAGACAAAGTTGAGGATAACAGTGCAGGTTTCTaGGTGTTGGCAGAACTGCTAATGTCAGCTTCATTT +
Preference number: 3 (lower is better)
Translates to: PEDKVEDNSAGF*VLAELLMSASF
Trigger: AAATGAAGCTGACATTAGCAGTTCTGCCAACACTCAGAAACCTGCACTGTTATCCTCAACTTTGTCTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR GCA 72 bp GTTTGTTTAAAACAAGCATACACACTTACGCATACCTaGGTATGTAGCACTGGGGGCACATACAACTCACAT +
Preference number: 3 (lower is better)
Translates to: VCLKQAYTLTHT*VCSTGGTYNSH
Trigger: ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTATGCTTGTTTTAAACAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR GCA 72 bp GTCATACAGAGCAAAGAGTTGCTATCTGCTGTACTTTaGCCATGTCAATTAGGAGCTGTTTTATGTGGCGTT +
Preference number: 3 (lower is better)
Translates to: VIQSKELLSAVL*PCQLGAVLCGV
Trigger: AACGCCACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR GCA 72 bp GTTTTATACACCCAGAAGAATCTCCAGATTCATGTTTaGATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAG +
Preference number: 3 (lower is better)
Translates to: VLYTQKNLQIHV*ISCCEPSLKTK
Trigger: CTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGATTCTTCTGGGTGTATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR GCA 72 bp TGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATaGTTACCATCCATTCTTGCTTTGAGCAGTGACAAA +
Preference number: 3 (lower is better)
Translates to: CGFYLHPRFSFQ*LPSILALSSDK
Trigger: TTTGTCACTGCTCAAAGCAAGAATGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCTACTTCATTGTTCCTaGGCATATAACACATTCTCA +
Preference number: 3 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYLLHCS*AYNTFS
Trigger: TGAGAATGTGTTATATGCCAAGGAACAATGAAGTAG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCTTCTGCAAGCCAGTTaGTTTTTAATGAGCTTAATG +
Preference number: 3 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYLLQAS*FLMSLM
Trigger: CATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGGATCAAACTGTACGTaGAGCCTGAATACTGCCATT +
Preference number: 3 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEGSNCT*SLNTAI
Trigger: AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp GCACATTCTCCCATTATTCAACCACTCCTTATCATAACGATATTTTGCACTCCAGATCAACGGATAGAATaGCCCTTGGGTACTGATAGG +
Preference number: 3 (lower is better)
Translates to: AHSPIIQPLLIITIFCTPDQRIE*PLGTDR
Trigger: CCTATCAGTACCCAAGGGCAATTCTATCCGTTGATC...TGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGGAGAATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATTCGCCTGCTCCAGCATaGGAGCTGTTTCATTGTAGT +
Preference number: 3 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYSPAPA*ELFHCS
Trigger: ACTACAATGAAACAGCTCCAATGCTGGAGCAGGCGA...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
3UTR TCA 72 bp CATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATaGATGTTACTAGGTACAAAGGGTCTTCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: HEFNRVHQESRG*MLLGTKGLLCV
Trigger: CACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR GCA 72 bp TTTTCTATTAGGTCCATCCTGCTGGTAACTTCGTTCTaGACATTTTCTATGTGTGTAAGGAGATTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: FSIRSILLVTSF*TFSMCVRRLSC
Trigger: GCAGCTCAATCTCCTTACACACATAGAAAATGTGCAGAACGAAGTTACCAGCAGGATGGACCTAATAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTTTGGTTTCAGAAATTaGTCCACTTGTGATCAAAGC +
Preference number: 3 (lower is better)
Translates to: IRKAQRTTCERLQSIGILFGFRN*STCDQS
Trigger: GCTTTGATCACAAGTGGACAAATTTCTGAAACCAAA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATTTGGTTTCAGAAATTaGTCCACTTGTGATCAAAGC +
Preference number: 3 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEFGFRN*STCDQS
Trigger: GCTTTGATCACAAGTGGACAAATTTCTGAAACCAAA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAGAAGCAAACTCTCCGTaGAAGAATCATCTAGGAAGT +
Preference number: 3 (lower is better)
Translates to: PSASQFVFNELNACNIFQEANSP*KNHLGS
Trigger: ACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTC...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAAAAACTTTGTGGCTTTaGATAGCTATGCTCACTTGT +
Preference number: 3 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEKTLWL*IAMLTC
Trigger: ACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTTCTTCTTCTTCTGTTTaGGTCTGTAGTGATCTTTGT +
Preference number: 3 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCSSSSV*VCSDLC
Trigger: ACAAAGATCACTACAGACCAAAACAGAAGAAGAAGA...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR-3UTR CAA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTGATAGCTATGCTCACTaGTTATATAAGTTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCDSYAH*LYKFLP
Trigger: TGGAAGGAACTTATATAACAAGTGAGCATAGCTATC...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR TCA 72 bp TATATTGACAATAACGGCAAAGACTTAACCGTTGGATaGTCACAGAAAATCAGAAGGTATGATTCAATGACA +
Preference number: 3 (lower is better)
Translates to: YIDNNGKDLTVG*SQKIRRYDSMT
Trigger: TGTCATTGAATCATACCTTCTGATTTTCTGTGATCATCCAACGGTTAAGTCTTTGCCGTTATTGTCAATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp ATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTACTCGGCCTCCTCTCTaGACAGCAGCCGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: MTQRALSETAYRVSGKRLTRPPL*TAAGPS
Trigger: GGACGGCCCGGCTGCTGTGCAGAGAGGAGGCCGAGT...AAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTCGCGGGAGGGAGCTaGGTCCGAGCCCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIFAGGS*VRALKL
Trigger: GAGCTTGAGGGCTCGGACCCAGCTCCCTCCCGCGAA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395379.5
CDS-3UTR CCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTTCGCGGGAGGGAGCTaGGTCCGAGCCCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFFAGGS*VRALKL
Trigger: GAGCTTGAGGGCTCGGACCCAGCTCCCTCCCGCGAA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395379.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGACTCGGCCTCCTCTCTaGACAGCAGCCGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGTRPPL*TAAGPS
Trigger: GGACGGCCCGGCTGCTGTGCAGAGAGGAGGCCGAGT...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACCTCCAGCAGCCCCATaGACACGCTGTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVPPAAP*TRCVAN
Trigger: GTTGGCAACACAGCGTGTGCATGGGGCTGCTGGAGG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CTGAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAACGGTAAGAGGAATCTaGGGCTACCGGTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LNHDLSQEGDRVPASQVATVRGI*GYRCCN
Trigger: GTTACAGCACCGGTAGCCTCAGATTCCTCTTACCGT...TGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCCTCCAGCAGCCCCATaGACACGCTGTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHPPAAP*TRCVAN
Trigger: GTTGGCAACACAGCGTGTGCATGGGGCTGCTGGAGG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CTGAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCACTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LNHDLSQEGDRVPASQVALQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...TGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACCACCTCTGACCTGGTaGGTCCCGGCAGATATAGCA +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVPPLTW*VPADIA
Trigger: TGCTATATCTGCCGGGACCCACCAGGTCAGAGGTGG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTACTCGGCCTCCTCTCTaGACAGCAGCCGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPTRPPL*TAAGPS
Trigger: GGACGGCCCGGCTGCTGTGCAGAGAGGAGGCCGAGT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTGCTTATACCCTGGGATaGCTGTCTCCAGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIAYTLG*LSPGLQ
Trigger: TTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGC...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACACCAGCTTAGTGGATaGTGGGATTTCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVHQLSG*WDFTCP
Trigger: GGGGCAGGTGAAATCCCAGCATCCACTAAGCTGGTG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR CCA 90 bp ATGGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCTTCGCGGGAGGGAGCTaGGTCCGAGCCCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: MELWFLPPPKILLPMLTIFAGGS*VRALKL
Trigger: GAGCTTGAGGGCTCGGACCCAGCTCCCTCCCGCGAA...GATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTCTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQILQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTGGAAGCTTATACCCTaGGATGCCTGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFWKLIP*DACLQA
Trigger: GGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTTTGCACTCCACCTCTaGCCTGGTGGGTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIFALHL*PGGSRQ
Trigger: CTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAACTCGGCCTCCTCTCTaGACAGCAGCCGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDETRPPL*TAAGPS
Trigger: GGACGGCCCGGCTGCTGTGCAGAGAGGAGGCCGAGT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR GCA 90 bp TCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAATGTGCAACATCAGGCTTAGGTGAAATCGCCTaGTCCAGCATTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRGRQGPSFSSGKCATSGLGEIA*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGCGATTTCACCTAA...GCCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTGCTTATACCCTGGGATaGCTGTCTCCAGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFAYTLG*LSPGLQ
Trigger: TTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGC...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVLQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAACTCCACCTCTGACCTaGTGGGTCCCGGCAGATATA +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTTPPLT*WVPADI
Trigger: TATATCTGCCGGGACCCACCAGGTCAGAGGTGGAGT...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTCAGCTTAGTGGATGCTaGGATTTCACCTGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIQLSGC*DFTCPL
Trigger: TAAGGGGCAGGTGAAATCCCAGCATCCACTAAGCTG...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395379.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTGTTACACGATCCAGCTaGGTCGATAGGACAACACCA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIVTRSS*VDRTTP
Trigger: TGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAAC...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTCACTTCCCATAGACTaGTTACACGATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQISLPID*LHDPAG
Trigger: CCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTCACCAATCTCAAAAGTaGTTCCAGGGCGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFHQSQK*FQGDLG
Trigger: CCCCAAATCGCCCTGGAATCACTTTTGAGATTGGTG...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACACCAATCTCAAAAGTaGTTCCAGGGCGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVHQSQK*FQGDLG
Trigger: CCCCAAATCGCCCTGGAATCACTTTTGAGATTGGTG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTTTGCACTCCACCTCTaGCCTGGTGGGTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSFALHL*PGGSRQ
Trigger: CTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATTTGCACTCCACCTCTaGCCTGGTGGGTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEFALHL*PGGSRQ
Trigger: CTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTGATACTAGAGCTCCGTaGTCATTCCAGTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFDTRAP*SFQWEP
Trigger: AGGTTCCCACTGGAATGATCACGGAGCTCTAGTATC...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGCACCAGCTTAGTGGATaGTGGGATTTCACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGHQLSG*WDFTCP
Trigger: GGGGCAGGTGAAATCCCAGCATCCACTAAGCTGGTG...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395379.5
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATACACTTACGCATACCTaGGTATGTAGCACTGGGGGC +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHTLTHT*VCSTGG
Trigger: GCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTLQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAGCAGATGTACTGCTCTaGAATGCTCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTADVLL*NALLQQ
Trigger: CTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGC...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTGGAAGCTTATACCCTaGGATGCCTGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGWKLIP*DACLQA
Trigger: GGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp CCTCTTTTTCTGCCCTGGGACATTCATTACGGTAAGAGGAATCTGAGGCTACCGAACAGTGCAGGTTTCTaGGTGTTGGCAGAACTGCTA +
Preference number: 4 (lower is better)
Translates to: PLFLPWDIHYGKRNLRLPNSAGF*VLAELL
Trigger: TAGCAGTTCTGCCAACACTCAGAAACCTGCACTGTT...CGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATACGGTAAGAGGAATCTaGGGCTACCGGTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYTVRGI*GYRCCN
Trigger: GTTACAGCACCGGTAGCCTCAGATTCCTCTTACCGT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATAACATCATCATCATCTaGGCTCCCAGGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYNIIII*APRVCE
Trigger: CTCGCAGACCCTGGGAGCTCAGATGATGATGATGTT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATCAGCGCACTACTTGTaGAAGGCTTCAATCGATTGG +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSAHYL*KASIDW
Trigger: CCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCACTCGGCCTCCTCTCTaGACAGCAGCCGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGTRPPL*TAAGPS
Trigger: GGACGGCCCGGCTGCTGTGCAGAGAGGAGGCCGAGT...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATTAGGTGAAATCGCCTaGTCCAGCATTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVLGEIA*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGCGATTTCACCTAA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCTCAAGTGGCAAATGTaGAACATCAGGCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHLKWQM*NIRHLW
Trigger: CCAGAGGTGCCTGATGTTGCACATTTGCCACTTGAG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATGTTTTCGATATTCCTaGTGCTGCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVCFRYS*CCWSSS
Trigger: AGAGGAGCTCCAGCAGCAGCAGGAATATCGAAAACA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAATGCACACGCTGTGTTaGCAACACAAGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVMHTLC*QHKHSS
Trigger: TGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCAT...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATAAGTTGGGGCAATCTTaGAAGAGGATCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHKLGQS*KRIWWL
Trigger: GAGCCACCAGATCCTCTTGCAAGATTGCCCCAACTT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TGCTTCCATCACATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCACACCAGCTTAGTGGATaGTGGGATTTCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CFHHMTQRALSETAYRVSHQLSG*WDFTWN
Trigger: GTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTG...TGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCATGTGATGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR GCA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCACTGAACACTCTTACCTaGCCCTTAGCATCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPLNTLT*PLASSG
Trigger: GCCCGAGGATGCTAAGGGGCAGGTAAGAGTGTTCAG...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATTCGCGGGAGGGAGCTaGGTCCGAGCCCTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQFAGGS*VRALKL
Trigger: GAGCTTGAGGGCTCGGACCCAGCTCCCTCCCGCGAA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR CCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTGTGCTCTCTGGCTGTaGAAAGACCATCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFCALWL*KDHLWN
Trigger: GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACGCCTGCTCCAGCATTaGAGCTGTTTCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTRLLQH*SCFIVV
Trigger: GACTACAATGAAACAGCTCCAATGCTGGAGCAGGCG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTCCACCTCTGACCTGGTaGGTCCCGGCAGATATAGCA +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIPPLTW*VPADIA
Trigger: TGCTATATCTGCCGGGACCCACCAGGTCAGAGGTGG...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAGTTACACGATCCAGCTaGGTCGATAGGACAACACCA +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTVTRSS*VDRTTP
Trigger: TGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAAC...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395386.7
3UTR CAA 72 bp TCCCATTATTCAACCACTCCTTATCATAACGATATTTaGCACTCCACCTCTGACCTGGTGGGTCCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHYSTTPYHNDI*HSTSDLVGPGR
Trigger: TCTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCACCAATCTCAAAAGTaGTTCCAGGGCGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYHQSQK*FQGDLG
Trigger: CCCCAAATCGCCCTGGAATCACTTTTGAGATTGGTG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATACTTTGAGGTTTAGGTaGAATCGCCTGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHTLRFR*NRLLQH
Trigger: ATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGCTCCAACTCCCCTGTaGAATCAAGCCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVAPTPL*NQASFP
Trigger: TGGAAAGCTGGCTTGATTTCACAGGGGAGTTGGAGC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCACATACAACTCACATaGGTACTGGCAGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHHIQLT*VLADSR
Trigger: CCTACTGTCTGCCAGTACTCATGTGAGTTGTATGTG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp CTGAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LNHDLSQEGDRVPASQVANGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...TGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTGGGGTCGCAATCTATTaGTATCCCAGTAAATCCACT +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFGVAIY*YPSKST
Trigger: AGTGGATTTACTGGGATAGCAATAGATTGCGACCCC...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp ATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTGGGGTCGCAATCTATTaGTATCCCAGTAAATCCACT +
Preference number: 4 (lower is better)
Translates to: MTQRALSETAYRVSGKRLGVAIY*YPSKST
Trigger: AGTGGATTTACTGGGATAGCAATAGATTGCGACCCC...AAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR GCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp TGCATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAGTTGAGGATAACAGTGCAGAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CISCCEPSLKTKLRITVQKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...CTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCTCAAGTGGCAAATGTaGAACATCAGGCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYLKWQM*NIRHLW
Trigger: CCAGAGGTGCCTGATGTTGCACATTTGCCACTTGAG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATATGCACACGCTGTGTTaGCAACACAAGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHMHTLC*QHKHSS
Trigger: TGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCAT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTCTACCATTTCATACCTaGTCCAGCATTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFLPFHT*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGTATGAAATGGTAG...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTTGCTGGGATTTCACCTaGCCCTTAGCATCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPCWDFT*PLASSG
Trigger: GCCCGAGGATGCTAAGGGGCAGGTGAAATCCCAGCA...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395379.5
CDS-3UTR GCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGACACTTACGCATACCTaGGTATGTAGCACTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVTLTHT*VCSTGG
Trigger: GCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGT...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CTGAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCACCCAACAGCTTTGGATaGCAACAAACCAATAAAGTT +
Preference number: 4 (lower is better)
Translates to: LNHDLSQEGDRVPASQVAPNSFG*QQTNKV
Trigger: AACTTTATTGGTTTGTTGGCATCCAAAGCTGTTGGG...TGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTCGCCTGCTCCAGCATTaGAGCTGTTTCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPRLLQH*SCFIVV
Trigger: GACTACAATGAAACAGCTCCAATGCTGGAGCAGGCG...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCAGGCATGGGTAAGGTaGCTAAACGCTGAGATCTTC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYQAWVR*LNAEIF
Trigger: GAAGATCTCAGCGTTTAGCCACCTTACCCATGCCTG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGCAGATGTACTGCTCTaGAATGCTCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVADVLL*NALLQQ
Trigger: CTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTCCACCTCTGACCTGGTaGGTCCCGGCAGATATAGCA +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTPPLTW*VPADIA
Trigger: TGCTATATCTGCCGGGACCCACCAGGTCAGAGGTGG...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTACTCCACCTCTGACCTaGTGGGTCCCGGCAGATATA +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAITPPLT*WVPADI
Trigger: TATATCTGCCGGGACCCACCAGGTCAGAGGTGGAGT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAATGTGGCGTTTAAGTTaGGGCAATCTTGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVMWRLS*GNLARG
Trigger: TCCTCTTGCAAGATTGCCCCAACTTAAACGCCACAT...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCAGCTTAGTGGATGCTaGGATTTCACCTGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYQLSGC*DFTCPL
Trigger: TAAGGGGCAGGTGAAATCCCAGCATCCACTAAGCTG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGGTTACACGATCCAGCTaGGTCGATAGGACAACACCA +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGVTRSS*VDRTTP
Trigger: TGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAAC...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTCACTTCCCATAGACTaGTTACACGATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGSLPID*LHDPAG
Trigger: CCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATTCACTTCCCATAGACTaGTTACACGATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYSLPID*LHDPAG
Trigger: CCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGA...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATAACTCACATGAGTACTaGCAGACAGTAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHNSHEY*QTVGPR
Trigger: CCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACTTACCTGCCCAGAGTaGATGGGTTCAATTAAACTG +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVLTCPE*MGSIKL
Trigger: CAGTTTAATTGAACCCATCCACTCTGGGCAGGTAAG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp CTGAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAGTTTCCTCCTTCTTTaGAGGTACTTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: LNHDLSQEGDRVPASQVASFLLL*RYFKPL
Trigger: AAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACT...TGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTGGAACGTTCTCTACATaGAGTCCAAATGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIGTFST*SPNVSL
Trigger: TAGTGAAACATTTGGACTTCATGTAGAGAACGTTCC...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395379.5
CDS-3UTR TCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTACTTTGAGGTTTAGGTaGAATCGCCTGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPTLRFR*NRLLQH
Trigger: ATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGT...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAAGGCACCTCTGGTACTaGAGATTCTTGCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTRHLWY*RFLLIL
Trigger: CAAAATCAGCAAGAATCTTCAGTACCAGAGGTGCCT...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAGCATCATCCTCATCCTaGGATTCCTCAAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVASSSS*DSSKLV
Trigger: AACCAATTTTGAGGAATCTCAGGATGAGGATGATGC...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAACCCCAGCTATTATTTaGTCTTGGTCTTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVTPAII*SWSFRF
Trigger: GAAGCGAAAAGACCAAGATCAAATAATAGCTGGGGT...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTGCCACTGAAGATGTaGGTCTCCTGGGTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGELPLKM*VSWVFG
Trigger: ACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTCTGCCACTGAAGATGTaGGTCTCCTGGGTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTLPLKM*VSWVFG
Trigger: ACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAG...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATGCTCCAACTCCCCTGTaGAATCAAGCCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNAPTPL*NQASFP
Trigger: TGGAAAGCTGGCTTGATTTCACAGGGGAGTTGGAGC...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTGACTTAACCGTTGGATaGTCACAGAAAATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFDLTVG*SQKIRR
Trigger: CCTTCTGATTTTCTGTGATCATCCAACGGTTAAGTC...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR TCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTGGAACGTTCTCTACATaGAGTCCTACAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIGTFST*SPTNVS
Trigger: TGAAACATTTGTAGGACTTCATGTAGAGAACGTTCC...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395376.5
CDS-3UTR GCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQISCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATTGTTTTCGATATTCCTaGTGCTGCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYCFRYS*CCWSSS
Trigger: AGAGGAGCTCCAGCAGCAGCAGGAATATCGAAAACA...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTGTTTTCGATATTCCTaGTGCTGCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPCFRYS*CCWSSS
Trigger: AGAGGAGCTCCAGCAGCAGCAGGAATATCGAAAACA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCCTCCAGCAGCCCCATaGACACGCTGTGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYPPAAP*TRCVAN
Trigger: GTTGGCAACACAGCGTGTGCATGGGGCTGCTGGAGG...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTGTACTGCTCTGGAATaGTCTCCTCCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSCTALE*SPPAAP
Trigger: TGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQISLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTGGAAAGACCATCTTTaGAACGTTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIWKDHL*NVLYMK
Trigger: CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATTGTGCTCTCTGGCTGTaGAAAGACCATCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYCALWL*KDHLWN
Trigger: GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACA...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTGTGCTCTCTGGCTGTaGAAAGACCATCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPCALWL*KDHLWN
Trigger: GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGCAGATGTACTGCTCTaGAATGCTCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIADVLL*NALLQQ
Trigger: CTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTACTCCACCTCTGACCTaGTGGGTCCCGGCAGATATA +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTTPPLT*WVPADI
Trigger: TATATCTGCCGGGACCCACCAGGTCAGAGGTGGAGT...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATATGTGGCGTTTAAGTTaGGGCAATCTTGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHMWRLS*GNLARG
Trigger: TCCTCTTGCAAGATTGCCCCAACTTAAACGCCACAT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACCTGCCCAGAGTGGATaGGTTCAATTAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTPAQSG*VQLNCS
Trigger: TGAACAGTTTAATTGAACCCATCCACTCTGGGCAGG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp TGCATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAGTTGAGGATAACAGTGCAGCCTGCCCAGAGTGGATaGGTTCAATTAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: CISCCEPSLKTKLRITVQPAQSG*VQLNCS
Trigger: TGAACAGTTTAATTGAACCCATCCACTCTGGGCAGG...CTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATAGAATCATGATCACTTaGCACATCGGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYRIMIT*HIGPFC
Trigger: GCAGAAGGGTCCGATGTGCCAAGTGATCATGATTCT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TGCATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAGTTGAGGATAACAGTGCAGCTTACCTGCCCAGAGTaGATGGGTTCAATTAAACTG +
Preference number: 4 (lower is better)
Translates to: CISCCEPSLKTKLRITVQLTCPE*MGSIKL
Trigger: CAGTTTAATTGAACCCATCCACTCTGGGCAGGTAAG...CTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAAGGTGGCTAAACGCTaGGATCTTCTTCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIKVAKR*DLLLRS
Trigger: TGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTCGTAAACATGCTTCGTaGAGCCAGAGAACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIRKHAS*SQRTPR
Trigger: TCTGGGAGTTCTCTGGCTTCACGAAGCATGTTTACG...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGCATCATCCTCATCCTaGGATTCCTCAAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHASSSS*DSSKLV
Trigger: AACCAATTTTGAGGAATCTCAGGATGAGGATGATGC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGCTTCACACTGGATCATaGAGCCATTCTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVLHTGS*SHSPHP
Trigger: TGGATGAGGAGAATGGCTTCATGATCCAGTGTGAAG...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCAACATCATCATCATCTaGGCTCCCAGGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILNIIII*APRVCE
Trigger: CTCGCAGACCCTGGGAGCTCAGATGATGATGATGTT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCAGATTGAGCTGCCACTaGAGATGTGAGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILRLSCH*RCESPG
Trigger: CCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAAAGATTGAGCTGCCACTaGAGATGTGAGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQRLSCH*RCESPG
Trigger: CCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCT...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTGCTCCAACTCCCCTGTaGAATCAAGCCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSAPTPL*NQASFP
Trigger: TGGAAAGCTGGCTTGATTTCACAGGGGAGTTGGAGC...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTCCTATTCCCATATCTaGTCAAAAGGGGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQISYSHI*SKGEFQ
Trigger: TTGAAATTCCCCTTTTGATCAGATATGGGAATAGGA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCTACTGTCAGTTTTCTaGTTGAGAACATTCATCGCC +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHLLSVF*LRTFIA
Trigger: GGCGATGAATGTTCTCAATCAGAAAACTGACAGTAG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFNGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp GGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTGAAACGAAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GCQQTSNLVKSSSLCLKRKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...TCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATCTTCCATCAGCTATTaGTTTGGAAGAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSSISY*FGRRIW
Trigger: CCAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATTTTCGATATTCCTGCTaGTGCTGGAGCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNFRYSC*CWSSSS
Trigger: GGAAGAGGAGCTCCAGCAGCAGCAGGAATATCGAAA...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp AGGTCCATCCTGCTGGTAACTTCGTTCTGCACATTTTCTATGTGTGTAAGGAGATGTTTTCGATATTCCTaGTGCTGCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSILLVTSFCTFSMCVRRCFRYS*CCWSSS
Trigger: AGAGGAGCTCCAGCAGCAGCAGGAATATCGAAAACA...TCTCCTTACACACATAGAAAATGTGCAGAACGAAGTTACCAGCAGGATGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCAAAGAGTTGCTATCTaGTGTACTTTGCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHQRVAI*CTLPMS
Trigger: TGACATGGGCAAAGTACAGCAGATAGCAACTCTTTG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACAAAGAGTTGCTATCTaGTGTACTTTGCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTQRVAI*CTLPMS
Trigger: TGACATGGGCAAAGTACAGCAGATAGCAACTCTTTG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTACAGAGCAAAGAGTTaGTATCTGCTGTACTTTGCC +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHYRAKS*YLLYFA
Trigger: GGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGCTACCATTTCATACCTaGTCCAGCATTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGLPFHT*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGTATGAAATGGTAG...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATGCTGGGATTTCACCTaGCCCTTAGCATCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQCWDFT*PLASSG
Trigger: GCCCGAGGATGCTAAGGGGCAGGTGAAATCCCAGCA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR GCA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAAACACTTACGCATACCTaGGTATGTAGCACTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQTLTHT*VCSTGG
Trigger: GCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGT...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGGATTCCAGGGCGATTTaGGGGCTTTTTACTCATCTT +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGDSRAI*GLFTHL
Trigger: AAGATGAGTAAAAAGCCCCCAAATCGCCCTGGAATC...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTCTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPLQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGTTTCCCATCAGTGGCTaGAGAGGGAGAAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVFPISG*RGRRNL
Trigger: AAGGTTTCTTCTCCCTCTCCAGCCACTGATGGGAAA...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATTTGGAAGAAGGATTTaGAAGCATCTGTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVFGRRI*KHLCIL
Trigger: GAGGATACACAGATGCTTCCAAATCCTTCTTCCAAA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATAAGCACTCTTCACACTaGATCATGAAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYKHSSH*IMKPFS
Trigger: GGAGAATGGCTTCATGATCCAGTGTGAAGAGTGCTT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAAGGAGCTGTTTTATGTaGCGTTTAAGTTGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTRSCFM*RLSWGN
Trigger: ATTGCCCCAACTTAAACGCCACATAAAACAGCTCCT...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTACCTGCTCCAGCATTaGAGCTGTTTCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGYLLQH*SCFIVV
Trigger: GACTACAATGAAACAGCTCCAATGCTGGAGCAGGTA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATTGGAAGCTTATACCCTaGGATGCCTGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENWKLIP*DACLQA
Trigger: GGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCA...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTCAAAGACTTAACCGTTaGATGATCACAGAAAATCAG +
Preference number: 4 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIQRLNR*MITENQ
Trigger: CTGATTTTCTGTGATCATCCAACGGTTAAGTCTTTG...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGAGAATCATGATCACTTaGCACATCGGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVRIMIT*HIGPFC
Trigger: GCAGAAGGGTCCGATGTGCCAAGTGATCATGATTCT...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATTTTGGATGGACTGGTaGCATTATGTAAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVFWMDW*HYVRLR
Trigger: CCTAAGTCTTACATAATGCCACCAGTCCATCCAAAA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGGAGACTTCGTTTATTaGAGGGGAAATAGTACGCTT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHGDFVY*RGNSTL
Trigger: AAGCGTACTATTTCCCCTCCAATAAACGAAGTCTCC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTCAACAAATGGAATTGTaGTTTTTACCTCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: MTQRALSETAYRVSGKRLQQMEL*FLPPPK
Trigger: CTTGGGTGGAGGTAAAAACCACAATTCCATTTGTTG...AAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR TCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTCACCAATCTCAAAAGTaGTTCCAGGGCGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPHQSQK*FQGDLG
Trigger: CCCCAAATCGCCCTGGAATCACTTTTGAGATTGGTG...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTAGTTTCCTCCTTCTTTaGAGGTACTTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFSFLLL*RYFKPL
Trigger: AAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACT...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATACTGAAGAAGAAAGCTaGGATACAAGCGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYTEEES*DTSVKS
Trigger: GGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTACGGTAAGAGGAATCTaGGGCTACCGGTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCTVRGI*GYRCCN
Trigger: GTTACAGCACCGGTAGCCTCAGATTCCTCTTACCGT...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCGTAAACATGCTTCGTaGAGCCAGAGAACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILRKHAS*SQRTPR
Trigger: TCTGGGAGTTCTCTGGCTTCACGAAGCATGTTTACG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATACATCAGCAAGCAGGTaGTGTGTAGAAACTATCTTT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHTSASR*CVETIF
Trigger: AAAGATAGTTTCTACACATCACCTGCTTGCTGATGT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAAACATCATCATCATCTaGGCTCCCAGGGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDENIIII*APRVCE
Trigger: CTCGCAGACCCTGGGAGCTCAGATGATGATGATGTT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACTGCCACTGAAGATGTaGGTCTCCTGGGTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQLPLKM*VSWVFG
Trigger: ACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAAGATTGAGCTGCCACTaGAGATGTGAGTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDERLSCH*RCESPG
Trigger: CCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACATTTCTACAGGTATCTTaGGCTTCACGTAAGCAACTA +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTFLQVS*ASRKQL
Trigger: TAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAA...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTTTCCAGCAGAATCATaGTCACTTGGCACATCGGAC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIFPAES*SLGTSD
Trigger: GTCCGATGTGCCAAGTGATCATGATTCTGCTGGAAA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGGTCTTCTGTGTGTGTaGCAAGAATCTAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIGLLCV*QESRQH
Trigger: GTGTTGCCTAGATTCTTGTCACACACACAGAAGACC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCAGGAATCAAGAGGATaGATGTTACTAGGTACAAAG +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHQESRG*MLLGTK
Trigger: CTTTGTACCTAGTAACATTCATCCTCTTGATTCCTG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTCAGCGCACTACTTGTaGAAGGCTTCAATCGATTGG +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAISAHYL*KASIDW
Trigger: CCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAAGGCTCTTACCTCACTTCCCATAGACTGGTTACACGATCCAGCTGGGTCGATCACAAAGCCACTTCCTaGTCAAAAGCATTTTCATTT +
Preference number: 4 (lower is better)
Translates to: KGSYLTSHRLVTRSSWVDHKATS*SKAFSF
Trigger: AAATGAAAATGCTTTTGATCAGGAAGTGGCTTTGTG...ATCGACCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGAGGTAAGAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR GCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: MTQRALSETAYRVSGKRLSFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...AAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR GCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFLPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGCCCAACAGCTTTGGATaGCAACAAACCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGPNSFG*QQTSNL
Trigger: AAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGG...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTTCTCCGCTCACTATaGTTGAAAGGTCTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGELLRSL*LKGLGG
Trigger: TCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATTTCGATATTCCTGCTaGTGCTGGAGCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEFRYSC*CWSSSS
Trigger: GGAAGAGGAGCTCCAGCAGCAGCAGGAATATCGAAA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATTGTACTGCTCTGGAATaGTCTCCTCCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYCTALE*SPPAAP
Trigger: TGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACA...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATATCATAACGATATTTTaGACTCCACCTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYIITIF*TPPLTW
Trigger: CCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGAT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAAAGTTGGGGCAATCTTaGAAGAGGATCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEKLGQS*KRIWWL
Trigger: GAGCCACCAGATCCTCTTGCAAGATTGCCCCAACTT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCAAAGAGTTGCTATCTaGTGTACTTTGCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYQRVAI*CTLPMS
Trigger: TGACATGGGCAAAGTACAGCAGATAGCAACTCTTTG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATGCTTATACCCTGGGATaGCTGTCTCCAGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENAYTLG*LSPGLQ
Trigger: TTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGC...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAGCCTTCTCTACCAATaGTCATTCTGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAISLLYQ*SFCSAW
Trigger: CCAGGCAGAACAGAATGAGCATTGGTAGAGAAGGCT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCAGCTTCCTTTTCTTGCTaGTATTTGGGGCTATCAGCA +
Preference number: 4 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPASFSC*YLGLSA
Trigger: TGCTGATAGCCCCAAATAGCAGCAAGAAAAGGAAGC...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATCTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENLQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACATGGAAAGACCATCTTTaGAACGTTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTWKDHL*NVLYMK
Trigger: CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCA...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCTGTGCTCTCTGGCTGTaGAAAGACCATCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: NSFGCQQTSNLVKSSSLCCALWL*KDHLWN
Trigger: GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACA...GCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCGCCTGCTCCAGCATTaGAGCTGTTTCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILRLLQH*SCFIVV
Trigger: GACTACAATGAAACAGCTCCAATGCTGGAGCAGGCG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCAGGCATGGGTAAGGTaGCTAAACGCTGAGATCTTC +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSQAWVR*LNAEIF
Trigger: GAAGATCTCAGCGTTTAGCCACCTTACCCATGCCTG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTTTGGAAGAAGGATTTaGAAGCATCTGTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHFGRRI*KHLCIL
Trigger: GAGGATACACAGATGCTTCCAAATCCTTCTTCCAAA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTATGTACAAGTATTGTaGGAATCTGAAGGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFYVQVL*ESEGSQ
Trigger: TTGGCTACCTTCAGATTCCCACAATACTTGTACATA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAGAATCATGATCACTTaGCACATCGGACCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIRIMIT*HIGPFC
Trigger: GCAGAAGGGTCCGATGTGCCAAGTGATCATGATTCT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACATTTTGGATGGACTGGTaGCATTATGTAAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTFWMDW*HYVRLR
Trigger: CCTAAGTCTTACATAATGCCACCAGTCCATCCAAAA...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCTGTCTGTTGATCTTTaGCACATTTGTCAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHLSVDL*HICQVG
Trigger: TCCAACTTGACAAATGTGCCAAAGATCAACAGACAG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATCACCAATCTCAAAAGTaGTTCCAGGGCGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENHQSQK*FQGDLG
Trigger: CCCCAAATCGCCCTGGAATCACTTTTGAGATTGGTG...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR TCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATAGTTTCCTCCTTCTTTaGAGGTACTTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHSFLLL*RYFKPL
Trigger: AAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGGGAACGTTCTCTACATaGAGTCCAAATGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGGTFST*SPNVSL
Trigger: TAGTGAAACATTTGGACTTCATGTAGAGAACGTTCC...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395379.5
CDS-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTAACAGTGCAGGTTTCTaGGTGTTGGCAGAACTGCTA +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSNSAGF*VLAELL
Trigger: TAGCAGTTCTGCCAACACTCAGAAACCTGCACTGTT...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp TATCCTCTTTTTCTGCCCTGGGACATTCATTACGGTAAGAGGAATCTGAGGCTAACTGAAGAAGAAAGCTaGGATACAAGCGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: YPLFLPWDIHYGKRNLRLTEEES*DTSVKS
Trigger: GGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGT...TAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAAAGGTGGCTAAACGCTaGGATCTTCTTCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEKVAKR*DLLLRS
Trigger: TGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACTTACCAAATGCTGTTaGGCTTTTGTCTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTLTKCC*AFVFQF
Trigger: AAATTGGAAGACAAAAGCTCAACAGCATTTGGTAAG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAACTGTCTTCATAGTCTaGATAGTCATGTTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTTVFIV*IVMLLR
Trigger: TCTAAGCAACATGACTATTCAGACTATGAAGACAGT...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTCGTAAACATGCTTCGTaGAGCCAGAGAACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCRKHAS*SQRTPR
Trigger: TCTGGGAGTTCTCTGGCTTCACGAAGCATGTTTACG...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTCTTCACACTGGATCATaGAGCCATTCTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTLHTGS*SHSPHP
Trigger: TGGATGAGGAGAATGGCTTCATGATCCAGTGTGAAG...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp CATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAGTTGAGGATAACAGTGCAGGTGATACCAAATGCTGTTaGGCTTTTGTCTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: HFLLRAFPEDKVEDNSAGDTKCC*AFVFQF
Trigger: AAATTGGAAGACAAAAGCTCAACAGCATTTGGTATC...ACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATAAGGTGCCATCCTATTaGCATCACAAATCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYKVPSY*HHKSVN
Trigger: ATTCACTGATTTGTGATGTCAATAGGATGGCACCTT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCACATACAACTCACATaGGTACTGGCAGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSHIQLT*VLADSR
Trigger: CCTACTGTCTGCCAGTACTCATGTGAGTTGTATGTG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCGGAACGTTCTCTACATaGAGTCCTACTTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: INPNSFGCQQTSNLVKSSGTFST*SPTFNR
Trigger: TCTGTTGAAAGTAGGACTTCATGTAGAGAACGTTCC...GCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGNGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYNGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp AGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTTAAAGGAAAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: RALSETAYRVSGKRLLKENGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...TTCCTTTAAAAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAGGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR GCA 90 bp CATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAGTTGAGGATAACAGTGCAGGTTCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: HFLLRAFPEDKVEDNSAGSFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...ACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGSCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATTCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYSCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCCCCAACAGCTTTGGATaGCAACAAACCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: INPNSFGCQQTSNLVKSSPNSFG*QQTSNL
Trigger: AAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGG...GCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR GCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTTAGGTGAAATCGCCTaGTCCAGCATTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILLGEIA*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGCGATTTCACCTAA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACTTCTCCGCTCACTATaGTTGAAAGGTCTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDELLRSL*LKGLGG
Trigger: TCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTCTTCCATCAGCTATTaGTTTGGAAGAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPSSISY*FGRRIW
Trigger: CCAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCTTTCGATATTCCTGCTaGTGCTGGAGCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLIFRYSC*CWSSSS
Trigger: GGAAGAGGAGCTCCAGCAGCAGCAGGAATATCGAAA...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460236.5
ENST00000486199.5
CDS-3UTR GCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAATGCACACGCTGTGTTaGCAACACAAGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEMHTLC*QHKHSS
Trigger: TGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCAT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGATCATAACGATATTTTaGACTCCACCTCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVIITIF*TPPLTW
Trigger: CCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGAT...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCAAGTTGGGGCAATCTTaGAAGAGGATCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLIKLGQS*KRIWWL
Trigger: GAGCCACCAGATCCTCTTGCAAGATTGCCCCAACTT...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATCACCAGCTTAGTGGATaGTGGGATTTCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENHQLSG*WDFTWN
Trigger: GTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTG...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395376.5
CDS-3UTR GCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCAGCCTTCTCTACCAATaGTCATTCTGTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILSLLYQ*SFCSAW
Trigger: CCAGGCAGAACAGAATGAGCATTGGTAGAGAAGGCT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp AGAGCCCTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTTAAAGGAAAGATTCTCCTTCCAATaGTTACCATCCATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RALSETAYRVSGKRLLKERFSFQ*LPSILA
Trigger: AGCAAGAATGGATGGTAAGCATTGGAAGGAGAATCT...TTCCTTTAAAAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAGGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp TTTCAGAATGACAGTTTTCACCGCATGGTATGGAACAAATACGTAGCATATTTCCTCCAGCGCTCAAAATaGACCAACATCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FQNDSFHRMVWNKYVAYFLQRSK*TNILPS
Trigger: GGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAG...GAAATATGCTACGTATTTGTTCCATACCATGCGGTGAAAACTGTCATTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPSLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTGGAAAGACCATCTTTaGAACGTTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGWKDHL*NVLYMK
Trigger: CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCAGAATCATCAGGCATaGGTAAGGTGGCTAAACGCT +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSQNHQA*VRWLNA
Trigger: AGCGTTTAGCCACCTTACCCATGCCTGATGATTCTG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTTTCCCATCAGTGGCTaGAGAGGGAGAAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILFPISG*RGRRNL
Trigger: AAGGTTTCTTCTCCCTCTCCAGCCACTGATGGGAAA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATCCCAGCTTCTCAAGTaGCAAATGTGCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGESQLLK*QMCNIR
Trigger: CCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAAGCACTCTTCACACTaGATCATGAAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIKHSSH*IMKPFS
Trigger: GGAGAATGGCTTCATGATCCAGTGTGAAGAGTGCTT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATAAGCACTCTTCACACTaGATCATGAAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNKHSSH*IMKPFS
Trigger: GGAGAATGGCTTCATGATCCAGTGTGAAGAGTGCTT...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACGAGGTGGTTCTTTATaGTTCTGTACATATTTCTTT +
Preference number: 4 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVRGGSL*FCTYFF
Trigger: AAAGAAATATGTACAGAACCATAAAGAACCACCTCG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GAAGATCGAGTTAGTGGAGAAGAGCACCTTTCCAAAAATTCGAGGGAACTGTCTTGTATTCCCTTCAGCTaGATTCTTTTCAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: EDRVSGEEHLSKNSRELSCIPFS*ILFRHS
Trigger: GGAATGCCTGAAAAGAATCCAGCTGAAGGGAATACA...AGACAGTTCCCTCGAATTTTTGGAAAGGTGCTCTTCTCCACTAACTCGATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTTGCTGGGATTTCACCTaGAACAGAAACTGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPCWDFT*NRNCPL
Trigger: TAAGGGGCAGTTTCTGTTCCAGGTGAAATCCCAGCA...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395376.5
CDS-3UTR CCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTCAGCTTAGTGGATGCTaGGATTTCACCTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPQLSGC*DFTWNR
Trigger: TCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTG...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395376.5
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGTGATATATAGGTTTTaGATGGACTGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHVIYRF*MDWWHY
Trigger: ATAATGCCACCAGTCCATCCAAAACCTATATATCAC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GCTGCCACTGAAGATGTGAGTCTCCTGGGTCTTCGGTGCCCTTTTTATCATTATGTGATATATAGGTTTTaGATGGACTGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: AATEDVSLLGLRCPFYHYVIYRF*MDWWHY
Trigger: ATAATGCCACCAGTCCATCCAAAACCTATATATCAC...ATAATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCAACTCACATGAGTACTaGCAGACAGTAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILNSHEY*QTVGPR
Trigger: CCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGGAGACTTCGTTTATTaGAGGGGAAATAGTACGCTT +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVGDFVY*RGNSTL
Trigger: AAGCGTACTATTTCCCCTCCAATAAACGAAGTCTCC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
3UTR CAA 72 bp GATCACTTGGCACATCGGACCCTTCTGCAAGCCAGTTaGTTTTTAATGAGCTTAATGCCTGCAATATATTCC +
Preference number: 4 (lower is better)
Translates to: DHLAHRTLLQAS*FLMSLMPAIYS
Trigger: GGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGGGTCCGATGTGCCAAGTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR CAA 72 bp TGTCATACAGAGCAAAGAGTTGCTATCTGCTGTACTTaGCCCATGTCAATTAGGAGCTGTTTTATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: CHTEQRVAICCT*PMSIRSCFMWR
Trigger: ACGCCACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAACTTTGAGGTTTAGGTaGAATCGCCTGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDETLRFR*NRLLQH
Trigger: ATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGT...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTACTGAAGAAGAAAGCTaGGATACAAGCGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAITEEES*DTSVKS
Trigger: GGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTAGGCACCTCTGGTACTaGAGATTCTTGCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSRHLWY*RFLLIL
Trigger: CAAAATCAGCAAGAATCTTCAGTACCAGAGGTGCCT...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACTTCACACTGGATCATaGAGCCATTCTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDELHTGS*SHSPHP
Trigger: TGGATGAGGAGAATGGCTTCATGATCCAGTGTGAAG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTACCCCAGCTATTATTTaGTCTTGGTCTTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAITPAII*SWSFRF
Trigger: GAAGCGAAAAGACCAAGATCAAATAATAGCTGGGGT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATACCCCAGCTATTATTTaGTCTTGGTCTTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNTPAII*SWSFRF
Trigger: GAAGCGAAAAGACCAAGATCAAATAATAGCTGGGGT...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp GAAGATCGAGTTAGTGGAGAAGAGCACCTTTCCAAAAATTCGAGGGAACTGTCTTTTCTACAGGTATCTTaGGCTTCACGTAAGCAACTA +
Preference number: 4 (lower is better)
Translates to: EDRVSGEEHLSKNSRELSFLQVS*ASRKQL
Trigger: TAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAA...AGACAGTTCCCTCGAATTTTTGGAAAGGTGCTCTTCTCCACTAACTCGATCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTGTCAGTTTTCTGATTaGGAACATTCATCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAICQFSD*EHSSPK
Trigger: CTTGGGCGATGAATGTTCTCAATCAGAAAACTGACA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATTGTCAGTTTTCTGATTaGGAACATTCATCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNCQFSD*EHSSPK
Trigger: CTTGGGCGATGAATGTTCTCAATCAGAAAACTGACA...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGTGTTTTCCCCAGAAGTaGGATTTCTACTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVCFPQK*DFYCQF
Trigger: AAACTGACAGTAGAAATCTCACTTCTGGGGAAAACA...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCCACATACAACTCACATaGGTACTGGCAGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLIHIQLT*VLADSR
Trigger: CCTACTGTCTGCCAGTACTCATGTGAGTTGTATGTG...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp TTTCAGAATGACAGTTTTCACCGCATGGTATGGAACAAATACGTAGCATATTTCACTGCTTCCATCACATaGCTCAGAGAGCCCTATCTG +
Preference number: 4 (lower is better)
Translates to: FQNDSFHRMVWNKYVAYFTASIT*LREPYL
Trigger: CAGATAGGGCTCTCTGAGTCATGTGATGGAAGCAGT...GAAATATGCTACGTATTTGTTCCATACCATGCGGTGAAAACTGTCATTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR TCA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCATCTTGCTTTGAGCAGTaGCAAAGCATACAATACACT +
Preference number: 4 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPSCFEQ*QSIQYT
Trigger: AGTGTATTGTATGCTTTGTCACTGCTCAAAGCAAGA...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR TCA 90 bp CTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTTAAAGGAAGATGAACATCCATTCTTGCTTTaGGCAGTGACAAAGCATACA +
Preference number: 4 (lower is better)
Translates to: LSETAYRVSGKRLLKEDEHPFLL*AVTKHT
Trigger: TGTATGCTTTGTCACTGCTCAAAGCAAGAATGGATG...TTCATCTTCCTTTAAAAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR GCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCGGGGTCGCAATCTATTaGTATCCCAGTAAATCCACT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILGVAIY*YPSKST
Trigger: AGTGGATTTACTGGGATAGCAATAGATTGCGACCCC...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGGGGTCGCAATCTATTaGTATCCCAGTAAATCCACT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEGVAIY*YPSKST
Trigger: AGTGGATTTACTGGGATAGCAATAGATTGCGACCCC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp GTCAAATCCTCGACTTGTATTAATTCTGGGGAAAGTGGTGATTTAGGGGGTTTTGGGGTCGCAATCTATTaGTATCCCAGTAAATCCACT +
Preference number: 4 (lower is better)
Translates to: VKSSTCINSGESGDLGGFGVAIY*YPSKST
Trigger: AGTGGATTTACTGGGATAGCAATAGATTGCGACCCC...AAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGSFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp CAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTGAAACGAGTTGCCTCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QQTSNLVKSSSLCLKRVASCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...GGCAACTCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR GCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGLPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPLPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTCCCAACAGCTTTGGATaGCAACAAACCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIPNSFG*QQTSNL
Trigger: AAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGG...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATTTCGATATTCCTGCTaGTGCTGGAGCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQFRYSC*CWSSSS
Trigger: GGAAGAGGAGCTCCAGCAGCAGCAGGAATATCGAAA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp GAGCATCATCCTCATCCTGAGATTCCTCAAAATTGGTTGAATCAAAGTCCTGATTTCTTTTCTCTTACCTaGCCAGAGTGGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EHHPHPEIPQNWLNQSPDFFSLT*PEWMGS
Trigger: TGAACCCATCCACTCTGGGCAGGTAAGAGAAAAGAA...ATCAGGACTTTGATTCAACCAATTTTGAGGAATCTCAGGATGAGGATGATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp AGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTGTCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SFGCQQTSNLVKSSSLCLSLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...CAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATTGTGCTCTCTGGCTGTaGAAAGACCATCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENCALWL*KDHLWN
Trigger: GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACA...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACCTCTTTTTCTGCCCTaGGACATTCATTACGGTAAG +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEPLFLP*DIHYGK
Trigger: CTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCCTCTTTTTCTGCCCTaGGACATTCATTACGGTAAG +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILPLFLP*DIHYGK
Trigger: CTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCTTCTTCTTCTGTTTTaGTCTGTAGTGATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYLLLLF*SVVIFV
Trigger: GACAAAGATCACTACAGACCAAAACAGAAGAAGAAG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATCGAGGTGGTTCTTTATaGTTCTGTACATATTTCTTT +
Preference number: 4 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHRGGSL*FCTYFF
Trigger: AAAGAAATATGTACAGAACCATAAAGAACCACCTCG...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAATGTGGCGTTTAAGTTaGGGCAATCTTGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEMWRLS*GNLARG
Trigger: TCCTCTTGCAAGATTGCCCCAACTTAAACGCCACAT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAGGAGCTGTTTTATGTaGCGTTTAAGTTGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIRSCFM*RLSWGN
Trigger: ATTGCCCCAACTTAAACGCCACATAAAACAGCTCCT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGCAAAGACTTAACCGTTaGATGATCACAGAAAATCAG +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGQRLNR*MITENQ
Trigger: CTGATTTTCTGTGATCATCCAACGGTTAAGTCTTTG...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCAACTCACATGAGTACTaGCAGACAGTAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLINSHEY*QTVGPR
Trigger: CCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTT...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCAGTTTCCTCCTTCTTTaGAGGTACTTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: INPNSFGCQQTSNLVKSSSFLLL*RYFKPL
Trigger: AAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACT...GCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAAACAGTGCAGGTTTCTaGGTGTTGGCAGAACTGCTA +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQNSAGF*VLAELL
Trigger: TAGCAGTTCTGCCAACACTCAGAAACCTGCACTGTT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGCTTACCAAATGCTGTTaGGCTTTTGTCTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVLTKCC*AFVFQF
Trigger: AAATTGGAAGACAAAAGCTCAACAGCATTTGGTAAG...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp AAATCCCAACTCCTGATACCAAATGCTGTTGAGCTTTTGTCTTCCAATTTCACTAGAAATCCCAACTCCTaGTACCAAATGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: KSQLLIPNAVELLSSNFTRNPNS*YQMLLS
Trigger: GCTCAACAGCATTTGGTATCAGGAGTTGGGATTTCT...AGTGAAATTGGAAGACAAAAGCTCAACAGCATTTGGTATCAGGAGTTGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATAAGGTGCCATCCTATTaGCATCACAAATCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNKVPSY*HHKSVN
Trigger: ATTCACTGATTTGTGATGTCAATAGGATGGCACCTT...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATGTCAGTTTTCTGATTaGGAACATTCATCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGECQFSD*EHSSPK
Trigger: CTTGGGCGATGAATGTTCTCAATCAGAAAACTGACA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATTTCCAGCAGAATCATaGTCACTTGGCACATCGGAC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQFPAES*SLGTSD
Trigger: GTCCGATGTGCCAAGTGATCATGATTCTGCTGGAAA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAGGTCTTCTGTGTGTGTaGCAAGAATCTAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQGLLCV*QESRQH
Trigger: GTGTTGCCTAGATTCTTGTCACACACACAGAAGACC...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVLPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TALDANKPVILLSRALFALPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...GGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTCCCAACAGCTTTGGATaGCAACAAACCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPPNSFG*QQTSNL
Trigger: AAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGG...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATTCTTCCATCAGCTATTaGTTTGGAAGAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNSSISY*FGRRIW
Trigger: CCAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGA...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCTATCTGCTGTACTTTaGCCATGTCAATTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILLSAVL*PCQLGA
Trigger: AGCTCCTAATTGACATGGGCAAAGTACAGCAGATAG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTACAGAGCAAAGAGTTaGTATCTGCTGTACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSYRAKS*YLLYFA
Trigger: GGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp AAATCCCAACTCCTGATACCAAATGCTGTTGAGCTTTTGTCTTCCAATTTCACTTTCTTTTCTCTTACCTaGCCAGAGTGGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KSQLLIPNAVELLSSNFTFFSLT*PEWMGS
Trigger: TGAACCCATCCACTCTGGGCAGGTAAGAGAAAAGAA...AGTGAAATTGGAAGACAAAAGCTCAACAGCATTTGGTATCAGGAGTTGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp CTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTTAAAGGAAGATGAAAAGCATACAATACACTaGTTCCATCACATGACTCAG +
Preference number: 4 (lower is better)
Translates to: LSETAYRVSGKRLLKEDEKHTIH*FHHMTQ
Trigger: CTGAGTCATGTGATGGAAGCAGTGTATTGTATGCTT...TTCATCTTCCTTTAAAAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp AACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCTGGAAAGACCATCTTTaGAACGTTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: NSFGCQQTSNLVKSSSLCWKDHL*NVLYMK
Trigger: CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCA...GCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATGTGCTCTCTGGCTGTaGAAAGACCATCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQCALWL*KDHLWN
Trigger: GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGGGATTCACAGGCTGTaGAGGACTAGTTTTATTTAT +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIGIHRL*RTSFIY
Trigger: ATAAATAAAACTAGTCCTCCACAGCCTGTGAATCCC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATCCCAGCTTCTCAAGTaGCAAATGTGCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQSQLLK*QMCNIR
Trigger: CCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATTCCCAGCTTCTCAAGTaGCAAATGTGCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYSQLLK*QMCNIR
Trigger: CCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGA...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTCATCAGCTATTGCTTTaGAAGAAGGATTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIHQLLL*KKDLEA
Trigger: TGCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATG...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTGTATTCCCTTCAGCTaGATTCTTTTCAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILCIPFS*ILFRHS
Trigger: GGAATGCCTGAAAAGAATCCAGCTGAAGGGAATACA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGAATTCCTCTATTAGGTaGTTTAAAGACAGACCCTTA +
Preference number: 4 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGNSSIR*FKDRPL
Trigger: TAAGGGTCTGTCTTTAAACCACCTAATAGAGGAATT...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp AGCACTAAATGTTTACACTTGACTGAAGCTGACCAGGTAATTTCAATACATTTCTCACTTCCCATAGACTaGTTACACGATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: STKCLHLTEADQVISIHFSLPID*LHDPAG
Trigger: CCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGA...GAAATGTATTGAAATTACCTGGTCAGCTTCAGTCAAGTGTAAACATTTAGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp TTTCAGAATGACAGTTTTCACCGCATGGTATGGAACAAATACGTAGCATATTTCCAGCTTAGTGGATGCTaGGATTTCACCTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: FQNDSFHRMVWNKYVAYFQLSGC*DFTWNR
Trigger: TCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTG...GAAATATGCTACGTATTTGTTCCATACCATGCGGTGAAAACTGTCATTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGTGATATATAGGTTTTaGATGGACTGGTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVVIYRF*MDWWHY
Trigger: ATAATGCCACCAGTCCATCCAAAACCTATATATCAC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCAAAGAAGATAACCCTTTaGGTAGCTAGGAATACTGAA +
Preference number: 4 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPKKITL*VARNTE
Trigger: TTCAGTATTCCTAGCTACCCAAAGGGTTATCTTCTT...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR TCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTGCTGATTTTGAGAACTaGTGGAGAATACTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSADFEN*WRILSH
Trigger: ATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGC...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGCTGATTTTGAGAACTaGTGGAGAATACTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEADFEN*WRILSH
Trigger: ATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAACATCAGCAAGCAGGTaGTGTGTAGAAACTATCTTT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGETSASR*CVETIF
Trigger: AAAGATAGTTTCTACACATCACCTGCTTGCTGATGT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATAGAAATCCCAACTCCTaGTACCAAATGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYRNPNS*YQMLLS
Trigger: GCTCAACAGCATTTGGTATCAGGAGTTGGGATTTCT...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460236.5
ENST00000486199.5
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGGAACGTTCTCTACATaGAGTCCTACAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEGTFST*SPTNVS
Trigger: TGAAACATTTGTAGGACTTCATGTAGAGAACGTTCC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395390.6
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCAAGGTGCCATCCTATTaGCATCACAAATCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILKVPSY*HHKSVN
Trigger: ATTCACTGATTTGTGATGTCAATAGGATGGCACCTT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTTTCTACAGGTATCTTaGGCTTCACGTAAGCAACTA +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILFLQVS*ASRKQL
Trigger: TAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACTACTGTCAGTTTTCTaGTTGAGAACATTCATCGCC +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDELLSVF*LRTFIA
Trigger: GGCGATGAATGTTCTCAATCAGAAAACTGACAGTAG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPNGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTAATGGACCAACATCTTaGCCTCCTCATAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSNGPTS*PPHSQF
Trigger: AAATTGACTATGAGGAGGGCAAGATGTTGGTCCATT...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp GTCAAATCCTCGACTTGTATTAATTCTGGGGAAAGTGGTGATTTAGGGGGTTTTTCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VKSSTCINSGESGDLGGFSCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...AAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCAAGTCGAGCTCTCTTTaGCTGAAACGAGTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGKSSSL*LKRVAL
Trigger: CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTT...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACTATCTGCTGTACTTTaGCCATGTCAATTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDELSAVL*PCQLGA
Trigger: AGCTCCTAATTGACATGGGCAAAGTACAGCAGATAG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCTACAGAGCAAAGAGTTaGTATCTGCTGTACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLIYRAKS*YLLYFA
Trigger: GGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTA...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp AGGTCCATCCTGCTGGTAACTTCGTTCTGCACATTTTCTATGTGTGTAAGGAGAGTTGAGCCTGAATACTaGCATTCAACTATATATATG +
Preference number: 4 (lower is better)
Translates to: RSILLVTSFCTFSMCVRRVEPEY*HSTIYM
Trigger: CATATATATAGTTGAATGGCAGTATTCAGGCTCAAC...TCTCCTTACACACATAGAAAATGTGCAGAACGAAGTTACCAGCAGGATGGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGCTACAAGAACAAATGTaGATGAATTTAACCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVLQEQM*MNLTVF
Trigger: GAACACGGTTAAATTCATGCACATTTGTTCTTGTAG...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp AGTGGTGATTTAGGGGGTTTTATACACCCAGAAGAATCTCCAGATTCATGTTTGCTCAAGTGGCAAATGTaGAACATCAGGCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: SGDLGGFIHPEESPDSCLLKWQM*NIRHSF
Trigger: AAAACTATGCCTGATGTTGCACATTTGCCACTTGAG...CAAACATGAATCTGGAGATTCTTCTGGGTGTATAAAACCCCCTAAATCACCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTGGAAAGACCATCTTTaGAACGTTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILWKDHL*NVLYMK
Trigger: CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GTCAAATCCTCGACTTGTATTAATTCTGGGGAAAGTGGTGATTTAGGGGGTTTTTGGAAAGACCATCTTTaGAACGTTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: VKSSTCINSGESGDLGGFWKDHL*NVLYMK
Trigger: CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCA...AAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGGGATTCACAGGCTGTaGAGGACTAGTTTTATTTAT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEGIHRL*RTSFIY
Trigger: ATAAATAAAACTAGTCCTCCACAGCCTGTGAATCCC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATCTTCACCTCTTTTTCTGCCCTaGGACATTCATTACGGTAAG +
Preference number: 4 (lower is better)
Translates to: KPRDEGQDDVYSLVFQSSPLFLP*DIHYGK
Trigger: CTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG...TGAAGATTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp TTATCACTGAAGAAGAAAGCTGAGATACAAGCGTCAAATCCTCGACTTGTATTACCTCTTTTTCTGCCCTaGGACATTCATTACGGTAAG +
Preference number: 4 (lower is better)
Translates to: LSLKKKAEIQASNPRLVLPLFLP*DIHYGK
Trigger: CTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG...TAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTTTGGAAGAAGGATTTaGAAGCATCTGTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILFGRRI*KHLCIL
Trigger: GAGGATACACAGATGCTTCCAAATCCTTCTTCCAAA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp GTCAAATCCTCGACTTGTATTAATTCTGGGGAAAGTGGTGATTTAGGGGGTTTTCATCAGCTATTGCTTTaGAAGAAGGATTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VKSSTCINSGESGDLGGFHQLLL*KKDLEA
Trigger: TGCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATG...AAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAAGGTTTTGGATGGACTaGTGGCATTATGTAAGACTT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGERFWMD*WHYVRL
Trigger: AAGTCTTACATAATGCCACCAGTCCATCCAAAACCT...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp GAGCATCATCCTCATCCTGAGATTCCTCAAAATTGGTTGAATCAAAGTCCTGATAGGTTTTGGATGGACTaGTGGCATTATGTAAGACTT +
Preference number: 4 (lower is better)
Translates to: EHHPHPEIPQNWLNQSPDRFWMD*WHYVRL
Trigger: AAGTCTTACATAATGCCACCAGTCCATCCAAAACCT...ATCAGGACTTTGATTCAACCAATTTTGAGGAATCTCAGGATGAGGATGATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCTGTCTGTTGATCTTTaGCACATTTGTCAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILLSVDL*HICQVG
Trigger: TCCAACTTGACAAATGTGCCAAAGATCAACAGACAG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTTAAAGGAAGATGAATTTCACCGCATGGTATaGAACAAATACGTAGCATAT +
Preference number: 4 (lower is better)
Translates to: LSETAYRVSGKRLLKEDEFHRMV*NKYVAY
Trigger: ATATGCTACGTATTTGTTCCATACCATGCGGTGAAA...TTCATCTTCCTTTAAAAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR CAA 72 bp AGGGTCTGCGAGAGATTTACAGTCCTGACCAAAACTTaGTGGCTTTTGATAGCTATGCTCACTTGTTATATA +
Preference number: 4 (lower is better)
Translates to: RVCERFTVLTKT*WLLIAMLTCYI
Trigger: TATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTCGCAGACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCAGTTTCCTCCTTCTTTaGAGGTACTTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILSFLLL*RYFKPL
Trigger: AAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAGGAACGTTCTCTACATaGAGTCCAAATGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEGTFST*SPNVSL
Trigger: TAGTGAAACATTTGGACTTCATGTAGAGAACGTTCC...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395386.7
CDS-3UTR TCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCACTGTCTTCATAGTCTaGATAGTCATGTTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILTVFIV*IVMLLR
Trigger: TCTAAGCAACATGACTATTCAGACTATGAAGACAGT...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR TCA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTACTGTCTTCATAGTCTaGATAGTCATGTTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTTVFIV*IVMLLR
Trigger: TCTAAGCAACATGACTATTCAGACTATGAAGACAGT...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp AAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATCTTCAGCATCATCCTCATCCTaGGATTCCTCAAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: KPRDEGQDDVYSLVFQSSASSSS*DSSKLV
Trigger: AACCAATTTTGAGGAATCTCAGGATGAGGATGATGC...TGAAGATTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTTCCTATTCCCATATCTaGTCAAAAGGGGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPSYSHI*SKGEFQ
Trigger: TTGAAATTCCCCTTTTGATCAGATATGGGAATAGGA...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR TCA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTGATACCAAATGCTGTTaGGCTTTTGTCTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTDTKCC*AFVFQF
Trigger: AAATTGGAAGACAAAAGCTCAACAGCATTTGGTATC...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATCACAAATCAGTGAATaGCCAGACATTACTAAGCTT +
Preference number: 4 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGESQISE*PDITKL
Trigger: AAGCTTAGTAATGTCTGGTCATTCACTGATTTGTGA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCTGTTTTCCCCAGAAGTaGGATTTCTACTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLICFPQK*DFYCQF
Trigger: AAACTGACAGTAGAAATCTCACTTCTGGGGAAAACA...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCGGGGTCGCAATCTATTaGTATCCCAGTAAATCCACT +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGGVAIY*YPSKST
Trigger: AGTGGATTTACTGGGATAGCAATAGATTGCGACCCC...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTTCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPSFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATTCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENSCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSLPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACCCAACAGCTTTGGATaGCAACAAACCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQPNSFG*QQTSNL
Trigger: AAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATCTTCCATCAGCTATTaGTTTGGAAGAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDESSISY*FGRRIW
Trigger: CCAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACTATCTGCTGTACTTTaGCCATGTCAATTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQLSAVL*PCQLGA
Trigger: AGCTCCTAATTGACATGGGCAAAGTACAGCAGATAG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCCTACCATTTCATACCTaGTCCAGCATTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGLPFHT*SSIGAV
Trigger: AACAGCTCCAATGCTGGAGCAGGTATGAAATGGTAG...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTTTTTCTTTCCAAGGTaGCATCCTATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILFFFPR*HPIDIT
Trigger: TGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGTTGAGCCTGAATACTaGCATTCAACTATATATATG +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIVEPEY*HSTIYM
Trigger: CATATATATAGTTGAATGGCAGTATTCAGGCTCAAC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTCTACAAGAACAAATGTaGATGAATTTAACCGTGTTC +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAILQEQM*MNLTVF
Trigger: GAACACGGTTAAATTCATGCACATTTGTTCTTGTAG...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATTCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENSLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDESLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AAATCCCAACTCCTGATACCAAATGCTGTTGAGCTTTTGTCTTCCAATTTCACTTTTGGAAGAAGGATTTaGAAGCATCTGTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: KSQLLIPNAVELLSSNFTFGRRI*KHLCIL
Trigger: GAGGATACACAGATGCTTCCAAATCCTTCTTCCAAA...AGTGAAATTGGAAGACAAAAGCTCAACAGCATTTGGTATCAGGAGTTGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACATCAGCTATTGCTTTaGAAGAAGGATTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEHQLLL*KKDLEA
Trigger: TGCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp AAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATCTTCAAGGAGCTGTTTTATGTaGCGTTTAAGTTGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KPRDEGQDDVYSLVFQSSRSCFM*RLSWGN
Trigger: ATTGCCCCAACTTAAACGCCACATAAAACAGCTCCT...TGAAGATTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCTACCTGCTCCAGCATTaGAGCTGTTTCATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGYLLQH*SCFIVV
Trigger: GACTACAATGAAACAGCTCCAATGCTGGAGCAGGTA...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAATTTACTCCACACATaGAATACAGGCACTACTTTT +
Preference number: 4 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAINLLHT*NTGTTF
Trigger: AAAAGTAGTGCCTGTATTCCATGTGTGGAGTAAATT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp CTATCTGAAACAGCCTACAGAGTGTCAGGTAAGCGCCTTTTAAAGGAAGATGAAAACATAGCCAACAAATaGAATTGTGGTTTTTACCTC +
Preference number: 4 (lower is better)
Translates to: LSETAYRVSGKRLLKEDENIANK*NCGFYL
Trigger: GAGGTAAAAACCACAATTCCATTTGTTGGCTATGTT...TTCATCTTCCTTTAAAAGGCGCTTACCTGACACTCTGTAGGCTGTTTCAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485595.5
3UTR CAA 72 bp TTCCAGTATTTCAGAAAACATAGCCAACAAATGGAATaGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQYFRKHSQQME*WFLPPPKILLP
Trigger: TGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCCATTTGTTGGCTATGTTTTCTGAAATACTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR TCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATAGTTTCCTCCTTCTTTaGAGGTACTTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENSFLLL*RYFKPL
Trigger: AAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACT...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR TCA 90 bp TTATCACTGAAGAAGAAAGCTGAGATACAAGCGTCAAATCCTCGACTTGTATTAGGAACGTTCTCTACATaGAGTCCAAATGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: LSLKKKAEIQASNPRLVLGTFST*SPNVSL
Trigger: TAGTGAAACATTTGGACTTCATGTAGAGAACGTTCC...TAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAACATCAGCAAGCAGGTaGTGTGTAGAAACTATCTTT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQTSASR*CVETIF
Trigger: AAAGATAGTTTCTACACATCACCTGCTTGCTGATGT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR TCA 90 bp GCACATTCTCCCATTATTCAACCACTCCTTATCATAACGATATTTTGCACTCCATCACAAATCAGTGAATaGCCAGACATTACTAAGCTT +
Preference number: 4 (lower is better)
Translates to: AHSPIIQPLLIITIFCTPSQISE*PDITKL
Trigger: AAGCTTAGTAATGTCTGGTCATTCACTGATTTGTGA...TGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGGAGAATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR TCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAACTCCTCATCCCAGCTaGGGTTATTTACAATGTATT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQTPHPS*GYLQCI
Trigger: AATACATTGTAAATAACCTCAGCTGGGATGAGGAGT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR GCA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDESFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATCTTGTTTGATAATGTaGTCTCTGGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQSCLIM*SLAVER
Trigger: TCTTTCCACAGCCAGAGAGCACATTATCAAACAAGA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCCCCAACAGCTTTGGATaGCAACAAACCAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGPNSFG*QQTSNL
Trigger: AAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGG...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTAGTTATGGCTATTACTaGGTTCTTATAGTCTTACAG +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPSYGYY*VLIVLQ
Trigger: CTGTAAGACTATAAGAACGCAGTAATAGCCATAACT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR GCA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCTTTTTCTTTCCAAGGTaGCATCCTATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLIFFFPR*HPIDIT
Trigger: TGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAA...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQSLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCGAGGTGGTTCTTTATaGTTCTGTACATATTTCTTT +
Preference number: 4 (lower is better)
Translates to: IRKAQRTTCERLQSIGILRGGSL*FCTYFF
Trigger: AAAGAAATATGTACAGAACCATAAAGAACCACCTCG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTAATTCCTCTATTAGGTaGTTTAAAGACAGACCCTTA +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPNSSIR*FKDRPL
Trigger: TAAGGGTCTGTCTTTAAACCACCTAATAGAGGAATT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATTATGTACAAGTATTGTaGGAATCTGAAGGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENYVQVL*ESEGSQ
Trigger: TTGGCTACCTTCAGATTCCCACAATACTTGTACATA...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTAAGGAAATCCAGTTATaGCTATTACTGCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPKEIQL*LLLRSY
Trigger: ATAAGAACGCAGTAATAGCCATAACTGGATTTCCTT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATTTTGGATGGACTGGTaGCATTATGTAAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQFWMDW*HYVRLR
Trigger: CCTAAGTCTTACATAATGCCACCAGTCCATCCAAAA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAAGGTTTTGGATGGACTaGTGGCATTATGTAAGACTT +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQRFWMD*WHYVRL
Trigger: AAGTCTTACATAATGCCACCAGTCCATCCAAAACCT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
3UTR CAA 72 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTaGATAGCTATGCTCACTTGTTATATAAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ERFTVLTKTLWL*IAMLTCYISSF
Trigger: GAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
3UTR CAA 72 bp CTTCAGCTGGATTCTTTTCAGGCATTCCATGTTCTTTaGCTGAGTACTGTAAACTGTTTTTACTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: LQLDSFQAFHVL*LSTVNCFYFSC
Trigger: ACATGAGAAGTAAAAACAGTTTACAGTACTCAGCAAAAGAACATGGAATGCCTGAAAAGAATCCAGCTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR GCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATTTTTCTTTCCAAGGTaGCATCCTATTGACATCACA +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQFFFPR*HPIDIT
Trigger: TGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCTCTCTACGTCTGGTGTaGCTATACAAGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGSLRLV*LYKLKF
Trigger: AAACTTCAACTTGTATAGCCACACCAGACGTAGAGA...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp CAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCACATCAGCTATTGCTTTaGAAGAAGGATTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QNFVAFDSYAHLLYKFLPHQLLL*KKDLEA
Trigger: TGCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATG...TGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CCA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACTTCTTCTTCTGTTTTaGTCTGTAGTGATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: PSASQFVFNELNACNIFQLLLLF*SVVIFV
Trigger: GACAAAGATCACTACAGACCAAAACAGAAGAAGAAG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CCA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATAAGGAAATCCAGTTATaGCTATTACTGCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TQVPDLSHSENTINSGENKEIQL*LLLRSY
Trigger: ATAAGAACGCAGTAATAGCCATAACTGGATTTCCTT...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCTCCTTCTTTGTTAATTaGTTCAATCTTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGSFFVN*FNLGRV
Trigger: TACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGA...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCTTGCCTGAAACGAGTTaGCTTGATTATTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGLPETS*LDYFSS
Trigger: AGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAA...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp TTATCACTGAAGAAGAAAGCTGAGATACAAGCGTCAAATCCTCGACTTGTATTATATAAAATACACAGCTaGTCTCTTCCAGTAATCTTG +
Preference number: 4 (lower is better)
Translates to: LSLKKKAEIQASNPRLVLYKIHS*SLPVIL
Trigger: CAAGATTACTGGAAGAGACCAGCTGTGTATTTTATA...TAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR GCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCAGTTATGGCTATTACTaGGTTCTTATAGTCTTACAG +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGSYGYY*VLIVLQ
Trigger: CTGTAAGACTATAAGAACGCAGTAATAGCCATAACT...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CCA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCAAGGAAATCCAGTTATaGCTATTACTGCGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGKEIQL*LLLRSY
Trigger: ATAAGAACGCAGTAATAGCCATAACTGGATTTCCTT...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS GCA 90 bp CGGGAGGGAGCTGGGTCCGAGCCCTCAAGCTCGCTCAGGGTCCGCTaGCATCGCCGCCGCCGCCGCCGCCTCCGCCGCCGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: REGAGSEPSSSLRVR*HRRRRRRLRRRPAL
Trigger: CAGGGCTGGCCGGCGGCGGAGGCGGCGGCGGCGGCGGCGATGGCAGCGGACCCTGAGCGAGCTTGAGGGCTCGGACCCAGCTCCCTCCCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220847.8
ENST00000361997.9
ENST00000395379.5
ENST00000395383.5
ENST00000622263.4
CDS CCA 90 bp TGGGGCCGCAGCGCCGGATCCGCCCAAGGTTTCGCGGGAGGGAGCTaGGTCCGAGCCCTCAAGCTCGCTCAGGGTCCGCTGCCATCGCCG +
Preference number: 5 (lower is better)
Translates to: WGRSAGSAQGFAGGS*VRALKLAQGPLPSP
Trigger: CGGCGATGGCAGCGGACCCTGAGCGAGCTTGAGGGCTCGGACCCAGCTCCCTCCCGCGAAACCTTGGGCGGATCCGGCGCTGCGGCCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000337920.8
ENST00000361997.9
ENST00000395379.5
ENST00000395383.5
ENST00000395386.7
ENST00000485595.5
ENST00000622263.4
CDS CCA 90 bp CACGATCCAGCTGGGTCGATAGGACAACACCAGCTTAGTGGATGCTaGGATTTCACCTGGAACAGAAACTGCCCCTTAGCATCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: HDPAGSIGQHQLSGC*DFTWNRNCPLASSG
Trigger: GCCCGAGGATGCTAAGGGGCAGTTTCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATCGACCCAGCTGGATCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395383.5
CDS-3UTR CAA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTCTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQILPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS GCA 90 bp TTACACGATCCAGCTGGGTCGATAGGACAACACCAGCTTAGTGGATaGTGGGATTTCACCTGGAACAGAAACTGCCCCTTAGCATCCTCG +
Preference number: 5 (lower is better)
Translates to: LHDPAGSIGQHQLSG*WDFTWNRNCPLASS
Trigger: CGAGGATGCTAAGGGGCAGTTTCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395383.5
CDS-3UTR CAA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTCTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFLPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp CCTCTTTTTCTGCCCTGGGACATTCATTACGGTAAGAGGAATCTGAGGCTACCGCTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PLFLPWDIHYGKRNLRLPLPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...CGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTCAACCCCAACAGCTTaGGATGCCAACAAACCAGTA +
Preference number: 5 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQISTPTA*DANKPV
Trigger: TACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGA...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATCGCCTGCTCCAGCATaGGAGCTGTTTCATTGTAGT +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSPAPA*ELFHCS
Trigger: ACTACAATGAAACAGCTCCAATGCTGGAGCAGGCGA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CCTCTTTTTCTGCCCTGGGACATTCATTACGGTAAGAGGAATCTGAGGCTACCGTCGCCTGCTCCAGCATaGGAGCTGTTTCATTGTAGT +
Preference number: 5 (lower is better)
Translates to: PLFLPWDIHYGKRNLRLPSPAPA*ELFHCS
Trigger: ACTACAATGAAACAGCTCCAATGCTGGAGCAGGCGA...CGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp GAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAATCTCCAGATTCATGTTaGCATTTCTTGCTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: EPRLKSRGRQGPSFSSGKSPDSC*HFLLRA
Trigger: GGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGA...TTTGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACACATGCACACGCTGTGTaGCCAACACAAGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTHAHAV*PTQALF
Trigger: GAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATG...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GCACACGCTGTGTTGCCAACACAAGCACTCTTCACACTGGATCATGAAGCCATTCAGAATCATGATCACTaGGCACATCGGACCCTTCTG +
Preference number: 5 (lower is better)
Translates to: AHAVLPTQALFTLDHEAIQNHDH*AHRTLL
Trigger: CAGAAGGGTCCGATGTGCCAAGTGATCATGATTCTG...AATGGCTTCATGATCCAGTGTGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ACCATCAACCCCAACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGCTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TINPNSFGCQQTSNLVKSLPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...CGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATATGTGGCGTTTAAGTaGGGGCAATCTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVYVAFK*GQSCKR
Trigger: CCTCTTGCAAGATTGCCCCAACTTAAACGCCACATA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAGCTATCTGCTGTACTTaGCCCATGTCAATTAGGAGC +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVAICCT*PMSIRS
Trigger: GCTCCTAATTGACATGGGCAAAGTACAGCAGATAGC...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTATACCTGCTCCAGCATaGGAGCTGTTTCATTGTAGT +
Preference number: 5 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIIPAPA*ELFHCS
Trigger: ACTACAATGAAACAGCTCCAATGCTGGAGCAGGTAT...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS TCA 90 bp ACCTTTTCTACAGAATCATCAGGCATGGGTAAGGTGGCTAAACGCTaGGATCTTCTTCTCCGCTCACTATGCTTGAAAGGTCTAGGGGGA +
Preference number: 5 (lower is better)
Translates to: TFSTESSGMGKVAKR*DLLLRSLCLKGLGG
Trigger: TCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTTACCCATGCCTGATGATTCTGTAGAAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000469979.6
ENST00000522253.1
ENST00000622263.4
CDS-3UTR CAA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGGCTGCAGCAGCTGCTTaGACTAAAGCTATCCAATCC +
Preference number: 5 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGAAAAA*TKAIQS
Trigger: GGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGC...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATGCTGCAGCAGCTGCTTaGACTAAAGCTATCCAATCC +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYAAAAA*TKAIQS
Trigger: GGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGC...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAATGTGCAACATCAGGCTTATCCTTATCTTTATaGCTGTTAGCGCTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: SRGRQGPSFSSGKCATSGLSLSL*LLALVR
Trigger: TCGAACCAGCGCTAACAGCAATAAAGATAAGGATAA...GCCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACATCAACCCCAACAGCTTaGGATGCCAACAAACCAGTA +
Preference number: 5 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTSTPTA*DANKPV
Trigger: TACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGA...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTCAACCCCAACAGCTTaGGATGCCAACAAACCAGTA +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHSTPTA*DANKPV
Trigger: TACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTCTCCAGATTCATGTTaGCATTTCTTGCTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHSPDSC*HFLLRA
Trigger: GGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACCATCAGCTATTGCTTaGGAAGAAGGATTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVPSAIA*EEGFGS
Trigger: GCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATGG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAGATCAACGGATAGAATaGCCCTTGGGTACTGATAGG +
Preference number: 5 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTDQRIE*PLGTDR
Trigger: CCTATCAGTACCCAAGGGCAATTCTATCCGTTGATC...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GGGAGACAGGGTCCCAGCTTCTCAAGTGGCAAATGTGCAACATCAGGCATAGTTGTCCTGATAAGCTTATaGGACTATAAGAGGGGATCT +
Preference number: 5 (lower is better)
Translates to: GRQGPSFSSGKCATSGIVVLISL*DYKRGS
Trigger: AGATCCCCTCTTATAGTCCAATAAGCTTATCAGGAC...AACTATGCCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGACCCTGTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAGGATCAAACTGTACGTaGAGCCTGAATACTGCCATT +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVGSNCT*SLNTAI
Trigger: AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCC...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CTGAACCACGACTTAAGTCAAGAGGGAGACAGGGTCCCAGCTTCTCAAGTGGCATCTCTTCCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: LNHDLSQEGDRVPASQVASLPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGAAGAGA...TGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp GGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTGAAACGAGCTGCAGCAGCTGCTTaGACTAAAGCTATCCAATCC +
Preference number: 5 (lower is better)
Translates to: GCQQTSNLVKSSSLCLKRAAAAA*TKAIQS
Trigger: GGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGC...TCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTCTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPLPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGELPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFVERPS*ERSLHE
Trigger: TTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCAC...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGTCGCCTGCTCCAGCATaGGAGCTGTTTCATTGTAGT +
Preference number: 5 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVSPAPA*ELFHCS
Trigger: ACTACAATGAAACAGCTCCAATGCTGGAGCAGGCGA...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GCACACGCTGTGTTGCCAACACAAGCACTCTTCACACTGGATCATGAAGCCATTCTCTTCCATCAGCTATaGCTTTGGAAGAAGGATTTG +
Preference number: 5 (lower is better)
Translates to: AHAVLPTQALFTLDHEAILFHQL*LWKKDL
Trigger: CAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGAG...AATGGCTTCATGATCCAGTGTGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAAGCTATTATTTGATCTaGGTCTTTTCGCTTCCCGGA +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSYYLI*VFSLPG
Trigger: TCCGGGAAGCGAAAAGACCAAGATCAAATAATAGCT...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTCCAGGCCTTCAAATTTaGGAGACAAAGGCTTTAATG +
Preference number: 5 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFPGLQI*ETKALM
Trigger: CATTAAAGCCTTTGTCTCCAAAATTTGAAGGCCTGG...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTACAAGGTGCCATCCTATaGACATCACAAATCAGTGAA +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVQGAIL*TSQISE
Trigger: TTCACTGATTTGTGATGTCAATAGGATGGCACCTTG...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp TGCTTCCATCACATGACTCAGAGAGCCCTATCTGAAACAGCCTACAGAGTGTCACCATCCATTCTTGCTTaGAGCAGTGACAAAGCATAC +
Preference number: 5 (lower is better)
Translates to: CFHHMTQRALSETAYRVSPSILA*SSDKAY
Trigger: GTATGCTTTGTCACTGCTCAAAGCAAGAATGGATGG...TGACACTCTGTAGGCTGTTTCAGATAGGGCTCTCTGAGTCATGTGATGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CAA 90 bp CATTTCTTGCTGCGAGCCTTCCCTGAAGACAAAGTTGAGGATAACAGTGCAGGTTCAACCCCAACAGCTTaGGATGCCAACAAACCAATA +
Preference number: 5 (lower is better)
Translates to: HFLLRAFPEDKVEDNSAGSTPTA*DANKPI
Trigger: TATTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGA...ACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS TCA 90 bp CATCAGGCACCTCTGGTACTGAAGATTCTTGCTGATTTTGAGAACTaGTGGAGAATACTTTCCCATCAGTGGCTGGAGAGGGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: HQAPLVLKILADFEN*WRILSHQWLEREKK
Trigger: TTTCTTCTCCCTCTCCAGCCACTGATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCTTCAGTACCAGAGGTGCCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000522253.1
ENST00000622263.4
CDS-3UTR CAA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTGGCTTTTTACTCATCTaGAGATCCTATTCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQIGFLLI*RSYSSV
Trigger: TACTGAAGAATAGGATCTCAAGATGAGTAAAAAGCC...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGCTGCAGCAGCTGCTTaGACTAAAGCTATCCAATCC +
Preference number: 5 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIAAAAA*TKAIQS
Trigger: GGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAATAAAGTTACAACCTTCCAGGCTGCAGCAGCTGCTTaGACTAAAGCTATCCAATCC +
Preference number: 5 (lower is better)
Translates to: INPNSFGCQQTNKVTTFQAAAAA*TKAIQS
Trigger: GGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGC...CTGGAAGGTTGTAACTTTATTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACTCCCTGTTTTGTTCTaGGCTGCAGCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDELPVLF*AAAAAA
Trigger: AGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp AACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: NSFGCQQTSNLVKSSSLCGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...GCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTTTATCCTTATCTTTATaGCTGTTAGCGCTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFLSLSL*LLALVR
Trigger: TCGAACCAGCGCTAACAGCAATAAAGATAAGGATAA...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp GTGATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTAACAAACCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: VIQLEAYTLGCLSPGLQINKPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTT...AATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp GCCCAGAGTGGATGGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTTCCCTGAAGACAAAGTaGAGGATAACAGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: AQSGWVQLNCSCHDSGSPSLKTK*RITVQV
Trigger: AACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGA...AGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCTCCGCTCACTATGCTaGAAAGGTCTAGGGGGATTC +
Preference number: 5 (lower is better)
Translates to: IRKAQRTTCERLQSIGILLRSLC*KGLGGF
Trigger: GAATCCCCCTAGACCTTTCAAGCATAGTGAGCGGAG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGATCAACGGATAGAATaGCCCTTGGGTACTGATAGG +
Preference number: 5 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVDQRIE*PLGTDR
Trigger: CCTATCAGTACCCAAGGGCAATTCTATCCGTTGATC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACAGAAGCAAACTCTCCGTaGAAGAATCATCTAGGAAGT +
Preference number: 5 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTEANSP*KNHLGS
Trigger: ACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTC...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTGCTGCAGCAGCTGCTTaGACTAAAGCTATCCAATCC +
Preference number: 5 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPAAAAA*TKAIQS
Trigger: GGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGC...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GTCAAATCCTCGACTTGTATTAATTCTGGGGAAAGTGGTGATTTAGGGGGTTTTGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VKSSTCINSGESGDLGGFGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...AAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATTTATCCTTATCTTTATaGCTGTTAGCGCTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHLSLSL*LLALVR
Trigger: TCGAACCAGCGCTAACAGCAATAAAGATAAGGATAA...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GATCCAGCTGGAAGCTTATACCCTGGGATGCCTGTCTCCAGGCCTTCAAATTTTAACAAACCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DPAGSLYPGMPVSRPSNFNKPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTT...AAAATTTGAAGGCCTGGAGACAGGCATCCCAGGGTATAAGCTTCCAGCTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAAGATTCTTGCTGATTTaGAGAACTGATGGAGAATAC +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVRFLLI*RTDGEY
Trigger: GTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCT...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATCTTTGGAAGAAGGATTaGGAAGCATCTGTGTATCCT +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYLWKKD*EASVYP
Trigger: AGGATACACAGATGCTTCCAAATCCTTCTTCCAAAG...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATCTTCTTCTTCTGTTTaGGTCTGTAGTGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSSSSV*VCSDLC
Trigger: ACAAAGATCACTACAGACCAAAACAGAAGAAGAAGA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACATGCACACGCTGTGTaGCCAACACAAGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEHAHAV*PTQALF
Trigger: GAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAGATAGCTATGCTCACTaGTTATATAAGTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVDSYAH*LYKFLP
Trigger: TGGAAGGAACTTATATAACAAGTGAGCATAGCTATC...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTATCTCATGTGGAATTCTaGTTCTTCTTCCAAACTACT +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVSHVEF*FFFQTT
Trigger: AGTAGTTTGGAAGAAGAACAAGAATTCCACATGAGA...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCAGAATCATGATCACTaGGCACATCGGACCCTTCTG +
Preference number: 5 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSQNHDH*AHRTLL
Trigger: CAGAAGGGTCCGATGTGCCAAGTGATCATGATTCTG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TGCGTATGTAGCACTGGGGGCACATACAACTCACATGAGTACTGGCAGACAGTAGATATTTTCTGTCTGTaGATCTTTGGCACATTTGTC +
Preference number: 5 (lower is better)
Translates to: CVCSTGGTYNSHEYWQTVDIFCL*IFGTFV
Trigger: GACAAATGTGCCAAAGATCAACAGACAGAAAATATC...TACTGTCTGCCAGTACTCATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS TCA 90 bp AAATCTTATGCTCTGCTGCTGCTGTCAAACTGTAACTTATTCATTTaGGACTCCCAAGGGAAAGTGAAGAGAAAATCCCACCGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSYALLLLSNCNLFI*DSQGKVKRKSHRGR
Trigger: CCTTCCACGGTGGGATTTTCTCTTCACTTTCCCTTGGGAGTCTCAAATGAATAAGTTACAGTTTGACAGCAGCAGCAGAGCATAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS GCA 90 bp GATGGATACCCACTAGATCAGGAGACTGAATTCCCTGAGGCTGCATaGAAAATGCTATGTGCTTGGTGTAGATGTATATGGGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: DGYPLDQETEFPEAA*KMLCAWCRCIWVFF
Trigger: AAAGAATACCCATATACATCTACACCAAGCACATAGCATTTTGCATGCAGCCTCAGGGAATTCAGTCTCCTGATCTAGTGGGTATCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522580.5
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGGCTTTTTACTCATCTaGAGATCCTATTCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHGFLLI*RSYSSV
Trigger: TACTGAAGAATAGGATCTCAAGATGAGTAAAAAGCC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATTTATCCTTATCTTTATaGCTGTTAGCGCTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYLSLSL*LLALVR
Trigger: TCGAACCAGCGCTAACAGCAATAAAGATAAGGATAA...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVVERPS*ERSLHE
Trigger: TTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCAC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTGAAACGAGTTGCCTTGGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: QTSNLVKSSSLCLKRVALVERPS*ERSLHE
Trigger: TTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCAC...CAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATAACAAACCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHNKPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTTCAACCCCAACAGCTTaGGATGCCAACAAACCAGTA +
Preference number: 5 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPSTPTA*DANKPV
Trigger: TACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGA...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp TTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTCTCTTTGCCTGAAATCAACCCCAACAGCTTaGGATGCCAACAAACCAGTA +
Preference number: 5 (lower is better)
Translates to: FGCQQTSNLVKSSSLCLKSTPTA*DANKPV
Trigger: TACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGA...TTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACTCCGCTCACTATGCTaGAAAGGTCTAGGGGGATTC +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQLRSLC*KGLGGF
Trigger: GAATCCCCCTAGACCTTTCAAGCATAGTGAGCGGAG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATAGATTCTTGCTGATTTaGAGAACTGATGGAGAATAC +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHRFLLI*RTDGEY
Trigger: GTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCT...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGCTCTTCCATCAGCTATaGCTTTGGAAGAAGGATTTG +
Preference number: 5 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVLFHQL*LWKKDL
Trigger: CAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGAG...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CCAGGAATCAAGAGGATGAATGTTACTAGGTACAAAGGGTCTTCTGTGTGTGTGGAAGCAAACTCTCCGTaGAAGAATCATCTAGGAAGT +
Preference number: 5 (lower is better)
Translates to: PGIKRMNVTRYKGSSVCVEANSP*KNHLGS
Trigger: ACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTC...CACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp AAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATCTTCACATGCACACGCTGTGTaGCCAACACAAGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: KPRDEGQDDVYSLVFQSSHAHAV*PTQALF
Trigger: GAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATG...TGAAGATTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp TACACACTTACGCATACCTGCGTATGTAGCACTGGGGGCACATACAACTCACATGATAGCTATGCTCACTaGTTATATAAGTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: YTLTHTCVCSTGGTYNSHDSYAH*LYKFLP
Trigger: TGGAAGGAACTTATATAACAAGTGAGCATAGCTATC...ATGTGAGTTGTATGTGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GCTGCCACTGAAGATGTGAGTCTCCTGGGTCTTCGGTGCCCTTTTTATCATTATTCTCATGTGGAATTCTaGTTCTTCTTCCAAACTACT +
Preference number: 5 (lower is better)
Translates to: AATEDVSLLGLRCPFYHYSHVEF*FFFQTT
Trigger: AGTAGTTTGGAAGAAGAACAAGAATTCCACATGAGA...ATAATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATGCATTCCATGTTCTTTaGCTGAGTACTGTAAACTGT +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYAFHVL*LSTVNC
Trigger: ACAGTTTACAGTACTCAGCAAAAGAACATGGAATGC...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATATGTGGCGTTTAAGTaGGGGCAATCTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEYVAFK*GQSCKR
Trigger: CCTCTTGCAAGATTGCCCCAACTTAAACGCCACATA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GGGTCTTTTTGTAAGCTAGTTAAAGGTGATCCAGCTGGAAGCTTATACCCTGGGCATTATGTACAAGTATaGTGGGAATCTGAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: GSFCKLVKGDPAGSLYPGHYVQV*WESEGS
Trigger: GCTACCTTCAGATTCCCACAATACTTGTACATAATG...CCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp CATGAGTACTGGCAGACAGTAGGACCTAGGCTCAAAATCCAGCAAGAGCTAACATTTGGTTTCAGAAATTaGTCCACTTGTGATCAAAGC +
Preference number: 5 (lower is better)
Translates to: HEYWQTVGPRLKIQQELTFGFRN*STCDQS
Trigger: GCTTTGATCACAAGTGGACAAATTTCTGAAACCAAA...TGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS TCA 90 bp ATACATTACCCTCTGGTACTGAAGATTCTTGCTGATTTTGAGAACTaGTGGAGAATACTTTCCCATCAGTGGCTGGAGAGGGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: IHYPLVLKILADFEN*WRILSHQWLEREKK
Trigger: TTTCTTCTCCCTCTCCAGCCACTGATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCTTCAGTACCAGAGGGTAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS-3UTR CAA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCTTATCCTTATCTTTATaGCTGTTAGCGCTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: INPNSFGCQQTSNLVKSSLSLSL*LLALVR
Trigger: TCGAACCAGCGCTAACAGCAATAAAGATAAGGATAA...GCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAATAAAGTTACAACCTTCCAGGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: INPNSFGCQQTNKVTTFQVERPS*ERSLHE
Trigger: TTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCAC...CTGGAAGGTTGTAACTTTATTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATAACAAACCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYNKPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTT...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTCCCTGAAGACAAAGTaGAGGATAACAGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: IRKAQRTTCERLQSIGILSLKTK*RITVQV
Trigger: AACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TCAGCACCATCAACCCCAACAGCTTTGGATGCCAACAAACCAATAAAGTTACAACTCTTCCATCAGCTATaGCTTTGGAAGAAGGATTTG +
Preference number: 5 (lower is better)
Translates to: SAPSTPTALDANKPIKLQLFHQL*LWKKDL
Trigger: CAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGAG...TTGTAACTTTATTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGATGGTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp TGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCCCACAATATTCTTCTTCTTCTGTTTaGGTCTGTAGTGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: WMDWWHYVRLRVGELPQYSSSSV*VCSDLC
Trigger: ACAAAGATCACTACAGACCAAAACAGAAGAAGAAGA...ATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTTGAAGAATAGCTATTATTTGATCTaGGTCTTTTCGCTTCCCGGA +
Preference number: 5 (lower is better)
Translates to: QSPDCIHPHSEANSPLKNSYYLI*VFSLPG
Trigger: TCCGGGAAGCGAAAAGACCAAGATCAAATAATAGCT...ATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGTCCTGACCAAAACTTaGTGGCTTTTGATAGCTATG +
Preference number: 5 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIVLTKT*WLLIAM
Trigger: CATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGAC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAGCTATCTGCTGTACTTaGCCCATGTCAATTAGGAGC +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEAICCT*PMSIRS
Trigger: GCTCCTAATTGACATGGGCAAAGTACAGCAGATAGC...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCGGATCAAACTGTACGTaGAGCCTGAATACTGCCATT +
Preference number: 5 (lower is better)
Translates to: IRKAQRTTCERLQSIGILGSNCT*SLNTAI
Trigger: AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCC...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCAACTAAATGTTTACACTaGACTGAAGCTGACCAGGTA +
Preference number: 5 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPTKCLH*TEADQV
Trigger: TACCTGGTCAGCTTCAGTCAAGTGTAAACATTTAGT...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS TCA 90 bp CCTCAAAGGCAGTATGATGTAAAGGTATCCATGGGCAACATGTCTTaGCTTTATCAGACAGCTACCCTAAAGAAGTTAAGTGATCTAGGT +
Preference number: 5 (lower is better)
Translates to: PQRQYDVKVSMGNMS*LYQTATLKKLSDLG
Trigger: ACCTAGATCACTTAACTTCTTTAGGGTAGCTGTCTGATAAAGTCAAGACATGTTGCCCATGGATACCTTTACATCATACTGCCTTTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS CCA 90 bp CATTTATGTTTTAATCAGCTATTCCAGTCACCTGCCCAGAGTGGATaGGTTCAATTAAACTGTTCATGTCATGACTCTGGAAGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: HLCFNQLFQSPAQSG*VQLNCSCHDSGSPD
Trigger: ATCAGGACTTCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGCAGGTGACTGGAATAGCTGATTAAAACATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315808.14
ENST00000395383.5
CDS-3UTR CAA 90 bp GGAATTGTGGTTTTTACCTCCACCCAAGATTCTCCTTCCAATGCTTACCATCCAGGCTTTTTACTCATCTaGAGATCCTATTCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: GIVVFTSTQDSPSNAYHPGFLLI*RSYSSV
Trigger: TACTGAAGAATAGGATCTCAAGATGAGTAAAAAGCC...TGGATGGTAAGCATTGGAAGGAGAATCTTGGGTGGAGGTAAAAACCACAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS-3UTR CAA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCGGTTTACTCCCTGTTTaGTTCTTGGCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGGLLPV*FLAAAA
Trigger: TGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACC...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CAA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPVERPS*ERSLHE
Trigger: TTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCAC...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAA +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEVERPS*ERSLHE
Trigger: TTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCAC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ATCAACCCCAACAGCTTTGGATGCCAACAAACCAGTAATCTTGTTAAGTCGAGCAACAAACCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: INPNSFGCQQTSNLVKSSNKPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTT...GCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATCTCCAGATTCATGTTaGCATTTCTTGCTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQSPDSC*HFLLRA
Trigger: GGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCCTTTGGAAGAAGGATTaGGAAGCATCTGTGTATCCT +
Preference number: 5 (lower is better)
Translates to: IRKAQRTTCERLQSIGILLWKKD*EASVYP
Trigger: AGGATACACAGATGCTTCCAAATCCTTCTTCCAAAG...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACCATCAGCTATTGCTTaGGAAGAAGGATTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEPSAIA*EEGFGS
Trigger: GCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATGG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp AAATCCCAACTCCTGATACCAAATGCTGTTGAGCTTTTGTCTTCCAATTTCACTCCATCAGCTATTGCTTaGGAAGAAGGATTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: KSQLLIPNAVELLSSNFTPSAIA*EEGFGS
Trigger: GCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATGG...AGTGAAATTGGAAGACAAAAGCTCAACAGCATTTGGTATCAGGAGTTGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486199.5
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTCTTCCATCAGCTATaGCTTTGGAAGAAGGATTTG +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGELFHQL*LWKKDL
Trigger: CAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGAG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GAGCATCATCCTCATCCTGAGATTCCTCAAAATTGGTTGAATCAAAGTCCTGATGAAGCAAACTCTCCGTaGAAGAATCATCTAGGAAGT +
Preference number: 5 (lower is better)
Translates to: EHHPHPEIPQNWLNQSPDEANSP*KNHLGS
Trigger: ACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTC...ATCAGGACTTTGATTCAACCAATTTTGAGGAATCTCAGGATGAGGATGATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCTATCATAACGATATTTaGCACTCCACCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: IRKAQRTTCERLQSIGILYHNDI*HSTSDL
Trigger: CAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATA...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAATATCATAACGATATTTaGCACTCCACCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEYHNDI*HSTSDL
Trigger: CAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATA...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTATCATAACGATATTTaGCACTCCACCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTYHNDI*HSTSDL
Trigger: CAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATA...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTCACCCCAGCTATTATTaGATCTTGGTCTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSHPSYY*ILVFSL
Trigger: AAGCGAAAAGACCAAGATCAAATAATAGCTGGGGTG...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GAGAGATTTACAGTCCTGACCAAAACTTTGTGGCTTTTGATAGCTATGCTCACTCACCCCAGCTATTATTaGATCTTGGTCTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: ERFTVLTKTLWLLIAMLTHPSYY*ILVFSL
Trigger: AAGCGAAAAGACCAAGATCAAATAATAGCTGGGGTG...AGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ATAAGAAAAGCTCAGCGCACTACTTGTGAAAGGCTTCAATCGATTGGTATACTCGTCCTGACCAAAACTTaGTGGCTTTTGATAGCTATG +
Preference number: 5 (lower is better)
Translates to: IRKAQRTTCERLQSIGILVLTKT*WLLIAM
Trigger: CATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGAC...GAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAAGTCCTGACCAAAACTTaGTGGCTTTTGATAGCTATG +
Preference number: 5 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQVLTKT*WLLIAM
Trigger: CATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGAC...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTGCATTCCATGTTCTTTaGCTGAGTACTGTAAACTGT +
Preference number: 5 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIAFHVL*LSTVNC
Trigger: ACAGTTTACAGTACTCAGCAAAAGAACATGGAATGC...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp TCTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATGCTATCTGCTGTACTTaGCCCATGTCAATTAGGAGC +
Preference number: 5 (lower is better)
Translates to: SSVLVCSDLCLSSLFFPYAICCT*PMSIRS
Trigger: GCTCCTAATTGACATGGGCAAAGTACAGCAGATAGC...ATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp AAAGAGTTGCTATCTGCTGTACTTTGCCCATGTCAATTAGGAGCTGTTTTATGTGGATCAAACTGTACGTaGAGCCTGAATACTGCCATT +
Preference number: 5 (lower is better)
Translates to: KELLSAVLCPCQLGAVLCGSNCT*SLNTAI
Trigger: AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCC...ACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS TCA 90 bp ACAGGCTGTGGAGGACTAGTTTTATTTATCACTGAAGAAGAAAGCTaGGATACAAGCGTCAAATCCTCGACTTGTATTAATTCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TGCGGLVLFITEEES*DTSVKSSTCINSGE
Trigger: TTCCCCAGAATTAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAAATAAAACTAGTCCTCCACAGCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000622263.4
CDS GCA 90 bp AGGGGCAGACTATGTCCTCCCTCTCTGTCAAGCTTTATAGTCTTTTaGTTAAAGATTACTTTCTGTTCATACCAAATGCTGTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RGRLCPPSLSSFIVF*LKITFCSYQMLLSF
Trigger: AAAGCTCAACAGCATTTGGTATGAACAGAAAGTAATCTTTAAGCAAAAGACTATAAAGCTTGACAGAGAGGGAGGACATAGTCTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395383.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAATCCCTGAAGACAAAGTaGAGGATAACAGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQSLKTK*RITVQV
Trigger: AACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGA...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GCACATTCTCCCATTATTCAACCACTCCTTATCATAACGATATTTTGCACTCCACTTTGGAAGAAGGATTaGGAAGCATCTGTGTATCCT +
Preference number: 5 (lower is better)
Translates to: AHSPIIQPLLIITIFCTPLWKKD*EASVYP
Trigger: AGGATACACAGATGCTTCCAAATCCTTCTTCCAAAG...TGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGGAGAATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp CTTCTGTTTTGGTCTGTAGTGATCTTTGTCTCTCTTCTCTCTTCTTTCCTTATCCTTTGGAAGAAGGATTaGGAAGCATCTGTGTATCCT +
Preference number: 5 (lower is better)
Translates to: LLFWSVVIFVSLLSSFLILWKKD*EASVYP
Trigger: AGGATACACAGATGCTTCCAAATCCTTCTTCCAAAG...GATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460236.5
ENST00000486199.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACCATCAGCTATTGCTTaGGAAGAAGGATTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQPSAIA*EEGFGS
Trigger: GCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATGG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTTCTTACCAAATGCTGTaGAGCTTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAISYQML*SFCLPI
Trigger: AATTGGAAGACAAAAGCTCAACAGCATTTGGTAAGA...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCAGATCAACGGATAGAATaGCCCTTGGGTACTGATAGG +
Preference number: 5 (lower is better)
Translates to: QNFVAFDSYAHLLYKFLPDQRIE*PLGTDR
Trigger: CCTATCAGTACCCAAGGGCAATTCTATCCGTTGATC...TGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp AAACACCAAGCATACTCAGGATCAAACTGTACGTTGAGCCTGAATACTGCCATTAAAACTTTGTGGCTTTaGATAGCTATGCTCACTTGT +
Preference number: 5 (lower is better)
Translates to: KHQAYSGSNCTLSLNTAIKTLWL*IAMLTC
Trigger: ACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTT...AATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAAGCATTCCATGTTCTTTaGCTGAGTACTGTAAACTGT +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGEAFHVL*LSTVNC
Trigger: ACAGTTTACAGTACTCAGCAAAAGAACATGGAATGC...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCATATGTGGCGTTTAAGTaGGGGCAATCTTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: QNFVAFDSYAHLLYKFLPYVAFK*GQSCKR
Trigger: CCTCTTGCAAGATTGCCCCAACTTAAACGCCACATA...TGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTCATTATGTACAAGTATaGTGGGAATCTGAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPHYVQV*WESEGS
Trigger: GCTACCTTCAGATTCCCACAATACTTGTACATAATG...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATTTATCCTTATCTTTATaGCTGTTAGCGCTGGTTCGA +
Preference number: 5 (lower is better)
Translates to: TQVPDLSHSENTINSGENLSLSL*LLALVR
Trigger: TCGAACCAGCGCTAACAGCAATAAAGATAAGGATAA...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CAA 90 bp ACCAAGGAAATCCAGTTATGGCTATTACTGCGTTCTTATAGTCTTACAGTGCCTAACAAACCAGTAATCTaGTTAAGTCGAGCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TKEIQLWLLLRSYSLTVPNKPVI*LSRALF
Trigger: AAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTT...AGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGATTTCCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337920.8
ENST00000395376.5
ENST00000395379.5
CDS-3UTR CAA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAATCTTCTTCTTCTGTTTaGGTCTGTAGTGATCTTTGT +
Preference number: 5 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQSSSSV*VCSDLC
Trigger: ACAAAGATCACTACAGACCAAAACAGAAGAAGAAGA...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAAGCTATTATTTGATCTaGGTCTTTTCGCTTCCCGGA +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQSYYLI*VFSLPG
Trigger: TCCGGGAAGCGAAAAGACCAAGATCAAATAATAGCT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACACCCCAGCTATTATTaGATCTTGGTCTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQHPSYY*ILVFSL
Trigger: AAGCGAAAAGACCAAGATCAAATAATAGCTGGGGTG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCATACCTGCTCCAGCATaGGAGCTGTTTCATTGTAGT +
Preference number: 5 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGIPAPA*ELFHCS
Trigger: ACTACAATGAAACAGCTCCAATGCTGGAGCAGGTAT...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAGTCCTGATAAGCTTATaGGACTATAAGAGGGGATCT +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQVLISL*DYKRGS
Trigger: AGATCCCCTCTTATAGTCCAATAAGCTTATCAGGAC...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTATTAAGTGTTCACTGTaGTCATACAGAGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSIKCSL*SYRAKS
Trigger: ACTCTTTGCTCTGTATGACAACAGTGAACACTTAAT...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GAGCATCATCCTCATCCTGAGATTCCTCAAAATTGGTTGAATCAAAGTCCTGATATTAAGTGTTCACTGTaGTCATACAGAGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: EHHPHPEIPQNWLNQSPDIKCSL*SYRAKS
Trigger: ACTCTTTGCTCTGTATGACAACAGTGAACACTTAAT...ATCAGGACTTTGATTCAACCAATTTTGAGGAATCTCAGGATGAGGATGATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ATATATAGGTTTTGGATGGACTGGTGGCATTATGTAAGACTTAGGGTGGGAGAACTACTTCATTGTTCCTaGGCATATAACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: IYRFWMDWWHYVRLRVGELLHCS*AYNTFS
Trigger: TGAGAATGTGTTATATGCCAAGGAACAATGAAGTAG...TTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CGGAACAAGCCCAGAGATGAAGGTCAGGATGATGTTTATTCTTTAGTATTCCAACTTCTGCAAGCCAGTTaGTTTTTAATGAGCTTAATG +
Preference number: 5 (lower is better)
Translates to: RNKPRDEGQDDVYSLVFQLLQAS*FLMSLM
Trigger: CATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAG...TTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp ACAAGTTTATCAGTAACATACCAAGAGGGAGCCTTCTCTACCAATGCTCATTCTTTTGGTTTCAGAAATTaGTCCACTTGTGATCAAAGC +
Preference number: 5 (lower is better)
Translates to: TSLSVTYQEGAFSTNAHSFGFRN*STCDQS
Trigger: GCTTTGATCACAAGTGGACAAATTTCTGAAACCAAA...AGAATGAGCATTGGTAGAGAAGGCTCCCTCTTGGTATGTTACTGATAAACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp ACCCAAGTCCCTGATTTATCGCATTCTGAGAATACCATAAACAGTGGTGAAAATGGCTTTTTACTCATCTaGAGATCCTATTCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: TQVPDLSHSENTINSGENGFLLI*RSYSSV
Trigger: TACTGAAGAATAGGATCTCAAGATGAGTAAAAAGCC...ATTTTCACCACTGTTTATGGTATTCTCAGAATGCGATAAATCAGGGACTTGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAGGCTTTTTACTCATCTaGAGATCCTATTCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEGFLLI*RSYSSV
Trigger: TACTGAAGAATAGGATCTCAAGATGAGTAAAAAGCC...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATCTTACCAAATGCTGTaGAGCTTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDESYQML*SFCLPI
Trigger: AATTGGAAGACAAAAGCTCAACAGCATTTGGTAAGA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp GCACATTCTCCCATTATTCAACCACTCCTTATCATAACGATATTTTGCACTCCAGATAGCTATGCTCACTaGTTATATAAGTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: AHSPIIQPLLIITIFCTPDSYAH*LYKFLP
Trigger: TGGAAGGAACTTATATAACAAGTGAGCATAGCTATC...TGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGGAGAATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAATCTCATGTGGAATTCTaGTTCTTCTTCCAAACTACT +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDESHVEF*FFFQTT
Trigger: AGTAGTTTGGAAGAAGAACAAGAATTCCACATGAGA...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp TTTAATACAACATTAATGGAGGCACCAAAACAACGCATTGTTATCAAATCAGGCCCAGGCCTTCAAATTTaGGAGACAAAGGCTTTAATG +
Preference number: 5 (lower is better)
Translates to: FNTTLMEAPKQRIVIKSGPGLQI*ETKALM
Trigger: CATTAAAGCCTTTGTCTCCAAAATTTGAAGGCCTGG...GCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337920.8
ENST00000395376.5
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAACTACTTCATTGTTCCTaGGCATATAACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDELLHCS*AYNTFS
Trigger: TGAGAATGTGTTATATGCCAAGGAACAATGAAGTAG...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CAAGAACAAATGTGCATGAATTTAACCGTGTTCACCAGGAATCAAGAGGATGAAGATATTTTCTGTCTGTaGATCTTTGGCACATTTGTC +
Preference number: 5 (lower is better)
Translates to: QEQMCMNLTVFTRNQEDEDIFCL*IFGTFV
Trigger: GACAAATGTGCCAAAGATCAACAGACAGAAAATATC...TTCATCCTCTTGATTCCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395386.7
ENST00000395390.6
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAAAAAACTTTGTGGCTTTaGATAGCTATGCTCACTTGT +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQKTLWL*IAMLTC
Trigger: ACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTT...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS-3UTR CAA 90 bp CCTTCTGCAAGCCAGTTTGTTTTTAATGAGCTTAATGCCTGCAATATATTCCAACTTCTGCAAGCCAGTTaGTTTTTAATGAGCTTAATG +
Preference number: 5 (lower is better)
Translates to: PSASQFVFNELNACNIFQLLQAS*FLMSLM
Trigger: CATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAG...TTGGAATATATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395386.7
ENST00000395390.6
ENST00000460236.5
CDS TCA 90 bp GCTCCAAAGGAAGCATGTTTAACAACTGACAACTTAATAGTAAACTaGCTACAGCAATTATACTACATACATTACAGAAGCTGTCCACAA +
Preference number: 5 (lower is better)
Translates to: APKEACLTTDNLIVN*LQQLYYIHYRSCPQ
Trigger: TTGTGGACAGCTTCTGTAATGTATGTAGTATAATTGCTGTAGTCAGTTTACTATTAAGTTGTCAGTTGTTAAACATGCTTCCTTTGGAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS TCA 90 bp TATGTTTGGTTCTATAGGAAATCAATATACATTACCCTCTGGTACTaGAGATTCTTGCTGATTTTGAGAACTGATGGAGAATACTTTCCC +
Preference number: 5 (lower is better)
Translates to: YVWFYRKSIYITLWY*RFLLILRTDGEYFP
Trigger: GGGAAAGTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCTTCAGTACCAGAGGGTAATGTATATTGATTTCCTATAGAACCAAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS-3UTR CAA 90 bp CAAAACTTTGTGGCTTTTGATAGCTATGCTCACTTGTTATATAAGTTCCTTCCACTACTTCATTGTTCCTaGGCATATAACACATTCTCA +
Preference number: 5 (lower is better)
Translates to: QNFVAFDSYAHLLYKFLPLLHCS*AYNTFS
Trigger: TGAGAATGTGTTATATGCCAAGGAACAATGAAGTAG...TGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460236.5
CDS CCA 72 bp AGCGCCGGATCCGCCCAAGGTTTCGCGGGAGGGAGCTaGGTCCGAGCCCTCAAGCTCGCTCAGGGTCCGCTG +
Preference number: 6 (lower is better)
Translates to: SAGSAQGFAGGS*VRALKLAQGPL
Trigger: CAGCGGACCCTGAGCGAGCTTGAGGGCTCGGACCCAGCTCCCTCCCGCGAAACCTTGGGCGGATCCGGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000337920.8
ENST00000361997.9
ENST00000395379.5
ENST00000395383.5
ENST00000395386.7
ENST00000485595.5
ENST00000622263.4
CDS GCA 72 bp AGTATTCTCTTTTCACTACCGACTCGGCCTCCTCTCTaGACAGCAGCCGGGCCGTCCGGGGCCGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SILFSLPTRPPL*TAAGPSGAELG
Trigger: CCCCAGCTCGGCCCCGGACGGCCCGGCTGCTGTGCAGAGAGGAGGCCGAGTCGGTAGTGAAAAGAGAATACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315808.14
ENST00000361997.9
ENST00000395376.5
ENST00000395379.5
ENST00000395386.7
CDS GCA 72 bp CCAGCTGGGTCGATAGGACAACACCAGCTTAGTGGATaGTGGGATTTCACCTGCCCCTTAGCATCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: PAGSIGQHQLSG*WDFTCPLASSG
Trigger: GCCCGAGGATGCTAAGGGGCAGGTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATCGACCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315808.14
ENST00000395379.5
ENST00000395386.7
ENST00000622263.4
CDS GCA 72 bp CCAGCTGGGTCGATAGGACAACACCAGCTTAGTGGATaGTGGGATTTCACCTGGAACAGAAACTGCCCCTTA +
Preference number: 6 (lower is better)
Translates to: PAGSIGQHQLSG*WDFTWNRNCPL
Trigger: TAAGGGGCAGTTTCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATCGACCCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395383.5
CDS CCA 72 bp GCTGGGTCGATAGGACAACACCAGCTTAGTGGATGCTaGGATTTCACCTGGAACAGAAACTGCCCCTTAGCA +
Preference number: 6 (lower is better)
Translates to: AGSIGQHQLSGC*DFTWNRNCPLA
Trigger: TGCTAAGGGGCAGTTTCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATCGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395376.5
ENST00000395383.5
CDS TCA 72 bp ACAGAATCATCAGGCATGGGTAAGGTGGCTAAACGCTaGGATCTTCTTCTCCGCTCACTATGCTTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: TESSGMGKVAKR*DLLLRSLCLKG
Trigger: ACCTTTCAAGCATAGTGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTTACCCATGCCTGATGATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000469979.6
ENST00000522253.1
ENST00000622263.4
CDS CCA 72 bp TTGACTAAAGCTATCCAATCCTCACTTCCCATAGACTaGTTACACGATCCAGCTGGGTCGATAGGACAACAC +
Preference number: 6 (lower is better)
Translates to: LTKAIQSSLPID*LHDPAGSIGQH
Trigger: GTGTTGTCCTATCGACCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGAGGATTGGATAGCTTTAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315808.14
ENST00000395376.5
ENST00000395379.5
ENST00000395383.5
ENST00000395386.7
ENST00000622263.4
CDS TCA 72 bp CCTCTGGTACTGAAGATTCTTGCTGATTTTGAGAACTaGTGGAGAATACTTTCCCATCAGTGGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PLVLKILADFEN*WRILSHQWLER
Trigger: CCTCTCCAGCCACTGATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCTTCAGTACCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000469979.6
ENST00000522253.1
ENST00000622263.4
CDS GCA 72 bp CCACTAGATCAGGAGACTGAATTCCCTGAGGCTGCATaGAAAATGCTATGTGCTTGGTGTAGATGTATATGG +
Preference number: 6 (lower is better)
Translates to: PLDQETEFPEAA*KMLCAWCRCIW
Trigger: CCATATACATCTACACCAAGCACATAGCATTTTGCATGCAGCCTCAGGGAATTCAGTCTCCTGATCTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522580.5
CDS TCA 72 bp GCTCTGCTGCTGCTGTCAAACTGTAACTTATTCATTTaGGACTCCCAAGGGAAAGTGAAGAGAAAATCCCAC +
Preference number: 6 (lower is better)
Translates to: ALLLLSNCNLFI*DSQGKVKRKSH
Trigger: GTGGGATTTTCTCTTCACTTTCCCTTGGGAGTCTCAAATGAATAAGTTACAGTTTGACAGCAGCAGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS GCA 72 bp ACATCTTCTTGTGACACATCCAGGACACATACAATCTaGCTTTTTGTACGTAACATGCTAGGGGCATCTTGC +
Preference number: 6 (lower is better)
Translates to: TSSCDTSRTHTI*LFVRNMLGASC
Trigger: GCAAGATGCCCCTAGCATGTTACGTACAAAAAGGCAGATTGTATGTGTCCTGGATGTGTCACAAGAAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477051.1
CDS CCA 72 bp AAACCTTTTCTACAGAATCATCAGGCATGGGTAAGGTaGCTAAACGCTGAGATCTTCTTCTCCGCTCACTAT +
Preference number: 6 (lower is better)
Translates to: KPFLQNHQAWVR*LNAEIFFSAHY
Trigger: ATAGTGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTTACCCATGCCTGATGATTCTGTAGAAAAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000469979.6
ENST00000522253.1
ENST00000622263.4
CDS GCA 72 bp ATCAGGAGACTGAATTCCCTGAGGCTGCATGCAAAATaGTATGTGCTTGGTGTAGATGTATATGGGTATTCT +
Preference number: 6 (lower is better)
Translates to: IRRLNSLRLHAK*YVLGVDVYGYS
Trigger: AGAATACCCATATACATCTACACCAAGCACATAGCATTTTGCATGCAGCCTCAGGGAATTCAGTCTCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522580.5
CDS CCA 72 bp TTTAATCAGCTATTCCAGTCACCTGCCCAGAGTGGATaGGTTCAATTAAACTGTTCATGTCATGACTCTGGA +
Preference number: 6 (lower is better)
Translates to: FNQLFQSPAQSG*VQLNCSCHDSG
Trigger: TCCAGAGTCATGACATGAACAGTTTAATTGAACCCATCCACTCTGGGCAGGTGACTGGAATAGCTGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315808.14
ENST00000395383.5
CDS CCA 72 bp TATTTTGATCAGTCACCGTTCAAGAAGATAACCCTTTaGGTAGCTAGGAATACTGAACACTCTTACCTGCCC +
Preference number: 6 (lower is better)
Translates to: YFDQSPFKKITL*VARNTEHSYLP
Trigger: GGGCAGGTAAGAGTGTTCAGTATTCCTAGCTACCCAAAGGGTTATCTTCTTGAACGGTGACTGATCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485595.5
CDS CAA 90 bp TTTTTCTTTTACCTGCTGCTGCTGGAGCTCCTCTTCCATCAGCTATaGCTTTGGAAGAAGGATTTGGAAGCATCTGTGTATCCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: FFFYLLLLELLFHQL*LWKKDLEASVYPLF
Trigger: AAAAAGAGGATACACAGATGCTTCCAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGAGGAGCTCCAGCAGCAGCAGGTAAAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361997.9
CDS CAA 72 bp TTGATAATGTGCTCTCTGGCTGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAAGTCCAAATGTTTCAC +
Preference number: 6 (lower is better)
Translates to: LIMCSLAVERPS*ERSLHEVQMFH
Trigger: GTGAAACATTTGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000337920.8
ENST00000395374.1
ENST00000395379.5
ENST00000395383.5
ENST00000395386.7
ENST00000486199.5
ENST00000622263.4
CDS CAA 72 bp TTGATAATGTGCTCTCTGGCTGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAAGTCCTACTTTCAACA +
Preference number: 6 (lower is better)
Translates to: LIMCSLAVERPS*ERSLHEVLLST
Trigger: TGTTGAAAGTAGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS CAA 90 bp TCCTCTTGTTTGATAATGTGCTCTCTGGCTGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAAGTCCTACTTTCAACAGAACACATA +
Preference number: 6 (lower is better)
Translates to: SSCLIMCSLAVERPS*ERSLHEVLLSTEHI
Trigger: TATGTGTTCTGTTGAAAGTAGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521038.5
CDS CAA 90 bp AAGGGGCAGACTATGTCCTCCCTCTCTGTCAAGCTTTATAGTCTTTaGCTTAAAGATTACTTTCTGTTCATACCAAATGCTGTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: KGQTMSSLSVKLYSL*LKDYFLFIPNAVEL
Trigger: AAGCTCAACAGCATTTGGTATGAACAGAAAGTAATCTTTAAGCAAAAGACTATAAAGCTTGACAGAGAGGGAGGACATAGTCTGCCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395383.5
CDS CAA 90 bp TACAAATGTACCAGTCGAGCCAACCAATTCCCTACCATTATATGTTaGTGTACCTGTGTGTGTCTTTGCACACAAGTCAGAATATTTCAG +
Preference number: 6 (lower is better)
Translates to: YKCTSRANQFPTIIC*CTCVCLCTQVRIFQ
Trigger: CTGAAATATTCTGACTTGTGTGCAAAGACACACACAGGTACACAAACATATAATGGTAGGGAATTGGTTGGCTCGACTGGTACATTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477051.1
CDS TCA 72 bp ATTCACAGGCTGTGGAGGACTAGTTTTATTTATCACTaGAGAAGAAAGCTGAGATACAAGCGTCAAATCCTC +
Preference number: 6 (lower is better)
Translates to: IHRLWRTSFIYH*RRKLRYKRQIL
Trigger: GAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAAATAAAACTAGTCCTCCACAGCCTGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220847.8
ENST00000315808.14
ENST00000361997.9
ENST00000395383.5
ENST00000395386.7
ENST00000395390.6
ENST00000622263.4
CDS TCA 72 bp ATGAATCAGGCCTCTCAGTATGCTTGGATTATGAGTTaGGGAGAGTCAAACTACAGTGGAATCTGTGTTATT +
Preference number: 6 (lower is better)
Translates to: MNQASQYAWIMS*GESNYSGICVI
Trigger: AATAACACAGATTCCACTGTAGTTTGACTCTCCTCAACTCATAATCCAAGCATACTGAGAGGCCTGATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS CAA 72 bp TTGATAATGTGCTCTCTGGCTGTGGAAAGACCATCTTaGGAACGTTCTCTACATGAAGTCCTACAAATGTTT +
Preference number: 6 (lower is better)
Translates to: LIMCSLAVERPS*ERSLHEVLQMF
Trigger: AAACATTTGTAGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361997.9
ENST00000395376.5
ENST00000395390.6
CDS CAA 72 bp GGCCCTCTTCTAGAAGAATACCCCTATGGGATAAAATaGCCCAATAAGAATGCATTACACTGCTTCAAGAAA +
Preference number: 6 (lower is better)
Translates to: GPLLEEYPYGIK*PNKNALHCFKK
Trigger: TTTCTTGAAGCAGTGTAATGCATTCTTATTGGGCAATTTTATCCCATAGGGGTATTCTTCTAGAAGAGGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS CAA 72 bp AATGAATCAGGCCTCTCAGTATGCTTGGATTATGAGTaGAGGAGAGTCAAACTACAGTGGAATCTGTGTTAT +
Preference number: 6 (lower is better)
Translates to: NESGLSVCLDYE*RRVKLQWNLCY
Trigger: ATAACACAGATTCCACTGTAGTTTGACTCTCCTCAACTCATAATCCAAGCATACTGAGAGGCCTGATTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS CAA 90 bp CAAAGTCCTGATTGTATTCATCCCCACTCAGAAGCAAACTCTCCGTaGAAGAATCATCTAGGAAGTCTACATCTGATAAGTCTAGAATAT +
Preference number: 6 (lower is better)
Translates to: QSPDCIHPHSEANSP*KNHLGSLHLISLEY
Trigger: ATATTCTAGACTTATCAGATGTAGACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493126.1
CDS TCA 72 bp CAGTATGATGTAAAGGTATCCATGGGCAACATGTCTTaGCTTTATCAGACAGCTACCCTAAAGAAGTTAAGT +
Preference number: 6 (lower is better)
Translates to: QYDVKVSMGNMS*LYQTATLKKLS
Trigger: ACTTAACTTCTTTAGGGTAGCTGTCTGATAAAGTCAAGACATGTTGCCCATGGATACCTTTACATCATACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS TCA 72 bp TTTCTGTGTCATTTCAAGGTTGTCAGGTACCTTCAGTaGACCCCAGTTTATAAGCCTAGAACAAGTATTTGT +
Preference number: 6 (lower is better)
Translates to: FLCHFKVVRYLQ*TPVYKPRTSIC
Trigger: ACAAATACTTGTTCTAGGCTTATAAACTGGGGTTCACTGAAGGTACCTGACAACCTTGAAATGACACAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS GCA 72 bp CTATGTCCTCCCTCTCTGTCAAGCTTTATAGTCTTTTaGTTAAAGATTACTTTCTGTTCATACCAAATGCTG +
Preference number: 6 (lower is better)
Translates to: LCPPSLSSFIVF*LKITFCSYQML
Trigger: CAGCATTTGGTATGAACAGAAAGTAATCTTTAAGCAAAAGACTATAAAGCTTGACAGAGAGGGAGGACATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395383.5
CDS CAA 90 bp ACGTATTCCATATACTGTGCAACTATATTGTCAATGTCTACCTATTaGGAACCTCTGAAAAACGCCATCCTTTTAACATTCTCTATACAG +
Preference number: 6 (lower is better)
Translates to: TYSIYCATILSMSTY*EPLKNAILLTFSIQ
Trigger: CTGTATAGAGAATGTTAAAAGGATGGCGTTTTTCAGAGGTTCCAAATAGGTAGACATTGACAATATAGTTGCACAGTATATGGAATACGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469979.6
CDS CAA 72 bp ATATACTGTGCAACTATATTGTCAATGTCTACCTATTaGGAACCTCTGAAAAACGCCATCCTTTTAACATTC +
Preference number: 6 (lower is better)
Translates to: IYCATILSMSTY*EPLKNAILLTF
Trigger: GAATGTTAAAAGGATGGCGTTTTTCAGAGGTTCCAAATAGGTAGACATTGACAATATAGTTGCACAGTATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469979.6