RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF20 (Homo sapiens)

Ensembl gene IDs: ENSG00000025293

Ensembl transcript IDs: ENST00000339089.10, ENST00000374000.8, ENST00000374012.8, ENST00000420233.1, ENST00000449988.1, ENST00000452270.5, ENST00000461122.5, ENST00000461405.1, ENST00000473943.1, ENST00000480940.1, ENST00000481202.5, ENST00000485604.1, ENST00000486408.5, ENST00000495338.5, ENST00000496305.5, ENST00000617560.1

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTCCTaGCCCAGATCCCTGAAGTCAGTCGGTGTCACGTGCATTCAGCAT +
Preference number: 1 (lower is better)
Translates to: SRSQNGLFVQCPPHS*PRSLKSVGVTCIQH
Trigger: ATGCTGAATGCACGTGACACCGACTGACTTCAGGGATCTGGGCCAGGAGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 90 bp CTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAAAATaGCCTCTTTGTCCAATGTCCACCACACTCCTGGCCCAGATCCCT +
Preference number: 1 (lower is better)
Translates to: LYGRLRDQSVLPQPK*PLCPMSTTLLAQIP
Trigger: AGGGATCTGGGCCAGGAGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 90 bp TGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATaGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAAAATGGCC +
Preference number: 1 (lower is better)
Translates to: CAQKRGIPRVYLLPL*QASRSECPPAAKMA
Trigger: GGCCATTTTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 90 bp ATGGCCTCTTTGTCCAATGTCCACCACACTCCTGGCCCAGATCCCTaGAGTCAGTCGGTGTCACGTGCATTCAGCATGCTAGGTTTATTT +
Preference number: 1 (lower is better)
Translates to: MASLSNVHHTPGPDP*SQSVSRAFSMLGLF
Trigger: AAATAAACCTAGCATGCTGAATGCACGTGACACCGACTGACTTCAGGGATCTGGGCCAGGAGTGTGGTGGACATTGGACAAAGAGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 90 bp AGACTGCATGACAGAACTCTTACAATGCAGCTGTCTGAACGTGCATaGCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAAC +
Preference number: 1 (lower is better)
Translates to: RLHDRTLTMQLSERA*HARLCISSHARNTN
Trigger: GTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGCATGCACGTTCAGACAGCTGCATTGTAAGAGTTCTGTCATGCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTaGTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAG +
Preference number: 1 (lower is better)
Translates to: SFNDVHRRGESQESI*YLYGRLRDQSVLPQ
Trigger: CTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 90 bp ACTCTTACAATGCAGCTGTCTGAACGTGCATGCCATGCACGCCTGTaGATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: TLTMQLSERACHARL*ISSHARNTNVSSEK
Trigger: TTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGCATGCACGTTCAGACAGCTGCATTGTAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 90 bp GCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCACAGCATGGTaGGCTCACAATATTCCTATGAAGCTAGAAAAGGAAAATGATGCC +
Preference number: 1 (lower is better)
Translates to: AGQPRLCSFPTSTAW*AHNIPMKLEKENDA
Trigger: GGCATCATTTTCCTTTTCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 90 bp CAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCAGACTaGATGACAGAACTCTTACAATGCAGCTGTCTGAACGTGCATGCC +
Preference number: 1 (lower is better)
Translates to: QVWLQKAILFLPFSD*MTELLQCSCLNVHA
Trigger: GGCATGCACGTTCAGACAGCTGCATTGTAAGAGTTCTGTCATGCAGTCTGAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 90 bp GCTCACAATATTCCTATGAAGCTAGAAAAGGAAAATGATGCCTGCTaGCCAAACACCATGCCAGGAAGAAACCAGGGAGTTGGCATGTGC +
Preference number: 1 (lower is better)
Translates to: AHNIPMKLEKENDAC*PNTMPGRNQGVGMC
Trigger: GCACATGCCAACTCCCTGGTTTCTTCCTGGCATGGTGTTTGGGCAGCAGGCATCATTTTCCTTTTCTAGCTTCATAGGAATATTGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 90 bp GCCTGCTTCGGTTTGGAATTCCTCCTAGATTCTTATTACTGTGAGTaGGATTCTAGTTCTTCCATAGGCTGTATGGGCTCTGCTACAAAA +
Preference number: 1 (lower is better)
Translates to: ACFGLEFLLDSYYCE*DSSSSIGCMGSATK
Trigger: TTTTGTAGCAGAGCCCATACAGCCTATGGAAGAACTAGAATCTCACTCACAGTAATAAGAATCTAGGAGGAATTCCAAACCGAAGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 90 bp TCACTAGACAGAACATTCCCTGAAATAGATTTTAGTACAGAGGCCTaGATTCATGTCCACAATGACCTGTGCTTAACTATTCCAAAGGTC +
Preference number: 1 (lower is better)
Translates to: SLDRTFPEIDFSTEA*IHVHNDLCLTIPKV
Trigger: GACCTTTGGAATAGTTAAGCACAGGTCATTGTGGACATGAATTCAGGCCTCTGTACTAAAATCTATTTCAGGGAATGTTCTGTCTAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 90 bp GGCCAGTTGGCAAAATTAGGGCAATTCAGTTTCTGCTTACATCGTTaGACAAGACATGAAATTGACTACCTTAAAAGTTACAGCTTCCAC +
Preference number: 1 (lower is better)
Translates to: GQLAKLGQFSFCLHR*TRHEIDYLKSYSFH
Trigger: GTGGAAGCTGTAACTTTTAAGGTAGTCAATTTCATGTCTTGTTCAACGATGTAAGCAGAAACTGAATTGCCCTAATTTTGCCAACTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 90 bp TTTCAAGTGAAGTTTGTGCAAAAAGACTCTCTTCATTCAACGATGTaGACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATG +
Preference number: 1 (lower is better)
Translates to: FQVKFVQKDSLHSTM*TEEGNPKSLFATFM
Trigger: CATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGAAGAGAGTCTTTTTGCACAAACTTCACTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 90 bp AAAGTAACACAAATATTGTCTCAAAAGGTACAAATAGGTTGTACCTaGACCTTAAGCAGCATGATCACCTTGCTCTCACAAAATAATACA +
Preference number: 1 (lower is better)
Translates to: KVTQILSQKVQIGCT*TLSSMITLLSQNNT
Trigger: TGTATTATTTTGTGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTTTTGAGACAATATTTGTGTTACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR CCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCACTCCCGCAGCCAAAATaGCCTCTTTGTCCAATGTCC +
Preference number: 2 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPLPQPK*PLCPMS
Trigger: GGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAG...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCAAGCTCCTCCTGCAGGTaGCCCAGGATTGTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSSSSCR*PRIVPP
Trigger: TGGGGGCACAATCCTGGGGCACCTGCAGGAGGAGCT...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR TCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACCTGGCCCAGATCCCTaGAGTCAGTCGGTGTCACGT +
Preference number: 2 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSPGPDP*SQSVSR
Trigger: ACGTGACACCGACTGACTTCAGGGATCTGGGCCAGG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACTTGGGTTCCAGACCCTaGCTGCTTCGGTTTGGAATT +
Preference number: 2 (lower is better)
Translates to: HACAFLPTPETPTLAVRNLGSRP*LLRFGI
Trigger: AATTCCAAACCGAAGCAGGCAGGGTCTGGAACCCAA...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACTCAGTCGGTGTCACGTaGATTCAGCATGCTAGGTTT +
Preference number: 2 (lower is better)
Translates to: HACAFLPTPETPTLAVRNSVGVT*IQHARF
Trigger: AAACCTAGCATGCTGAATGCACGTGACACCGACTGA...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACAGGCTGTATGGGCTCTaGTACAAAAGCCATAACCCA +
Preference number: 2 (lower is better)
Translates to: HACAFLPTPETPTLAVRNRLYGL*YKSHNP
Trigger: TGGGTTATGGCTTTTGTAGCAGAGCCCATACAGCCT...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CAA 90 bp TTCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTaGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: FIQRCAQKRGIPRVY*LPLWQASRSECPPA
Trigger: TGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR TCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCTTGTCCCCAGTACCATaGAGTCATGCAAGAGATGTG +
Preference number: 2 (lower is better)
Translates to: SSRLTGVATESHPVSSLFLSPVP*SHARDV
Trigger: CACATCTCTTGCATGACTTCATGGTACTGGGGACAA...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR TCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACCACGTGTATTCTCTCTaGTGGACAGCTATAGCAGAT +
Preference number: 2 (lower is better)
Translates to: HACAFLPTPETPTLAVRNHVYSL*WTAIAD
Trigger: ATCTGCTATAGCTGTCCATCAGAGAGAATACACGTG...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCATCCCAAGAGTCTATTTaGTACCTTTATGGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPSQESI*YLYGRL
Trigger: AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGA...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCGAAGTGGGTAGAAAATaGTGTCCTTTGGGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: SSRLTGVATESHPVSSLFEVGRK*CPLGSR
Trigger: TCTGGAACCCAAAGGACAGCATTTTCTACCCACTTC...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTCAGGGAGTTGGCATGTaGCCCAACGTGATAGAAAAG +
Preference number: 2 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCQGVGM*PNVIEK
Trigger: CTTTTCTATCACGTTGGGGCACATGCCAACTCCCTG...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTGAAAATGATGCCTGCTaGCCAAACACCATGCCAGGA +
Preference number: 2 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCENDAC*PNTMPG
Trigger: TCCTGGCATGGTGTTTGGGCAGCAGGCATCATTTTC...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACCTGTCTGAACGTGCATaGCATGCACGCCTGTGCATT +
Preference number: 2 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYLSERA*HARLCI
Trigger: AATGCACAGGCGTGCATGGCATGCACGTTCAGACAG...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR GCA 90 bp GACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTGAAATTCCTATAGTCCTGAGGAAGGAGGATTaGTTGAGCCCAAGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: DNQTSKQGPAHLFEIPIVLRKED*LSPRGQ
Trigger: TTGACCTCTTGGGCTCAAGCAATCCTCCTTCCTCAG...GACTATAGGAATTTCAAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452270.5
3UTR-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCTATAGCAATTACATGTaGAACCGTAACCTGCAAAAG +
Preference number: 2 (lower is better)
Translates to: SSRLTGVATESHPVSSLFYSNYM*NRNLQK
Trigger: CTTTTGCAGGTTACGGTTCCACATGTAATTGCTATA...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR TCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTTAGTACAGAGGCCTaGATTCATGTCCACAATGAC +
Preference number: 2 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCFSTEA*IHVHND
Trigger: GTCATTGTGGACATGAATTCAGGCCTCTGTACTAAA...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR CCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCATATTTGCTACCTTTATaGCAGGCTTCGAGATCAGAG +
Preference number: 2 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSYLLPL*QASRSE
Trigger: CTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATA...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR TCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACCCTTTTCAGACTGCATaGCAGAACTCTTACAATGCA +
Preference number: 2 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYPFQTA*QNSYNA
Trigger: TGCATTGTAAGAGTTCTGTCATGCAGTCTGAAAAGG...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 72 bp AGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAAAATaGCCTCTTTGTCCAATGTCCACCACACTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: RLRDQSVLPQPK*PLCPMSTTLLA
Trigger: GGCCAGGAGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGATCTCGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 72 bp CAAAATGGCCTCTTTGTCCAATGTCCACCACACTCCTaGCCCAGATCCCTGAAGTCAGTCGGTGTCACGTGC +
Preference number: 3 (lower is better)
Translates to: QNGLFVQCPPHS*PRSLKSVGVTC
Trigger: GCACGTGACACCGACTGACTTCAGGGATCTGGGCCAGGAGTGTGGTGGACATTGGACAAAGAGGCCATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 72 bp TTGTCCAATGTCCACCACACTCCTGGCCCAGATCCCTaGAGTCAGTCGGTGTCACGTGCATTCAGCATGCTA +
Preference number: 3 (lower is better)
Translates to: LSNVHHTPGPDP*SQSVSRAFSML
Trigger: TAGCATGCTGAATGCACGTGACACCGACTGACTTCAGGGATCTGGGCCAGGAGTGTGGTGGACATTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 72 bp AAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATaGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCC +
Preference number: 3 (lower is better)
Translates to: KRGIPRVYLLPL*QASRSECPPAA
Trigger: GGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR CAA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACGCCAAAATGGCCTCTTaGTCCAATGTCCACCACACT +
Preference number: 3 (lower is better)
Translates to: HACAFLPTPETPTLAVRNAKMAS*SNVHHT
Trigger: AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGC...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR-3UTR CAA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGATCCCAAGAGTCTATTaGCTACCTTTATGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: AMHACAFLPTPETPTLAVIPRVY*LPLWQA
Trigger: AGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGAT...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 72 bp GATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTaGTACCTTTATGGCAGGCTTCGAGATCAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: DVHRRGESQESI*YLYGRLRDQSV
Trigger: GACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 72 bp CCAAGACTCTGCTCTTTCCCAACCTCCACAGCATGGTaGGCTCACAATATTCCTATGAAGCTAGAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: PRLCSFPTSTAW*AHNIPMKLEKE
Trigger: TTCCTTTTCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAGCAGAGTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 72 bp GTAGAAAATGCTGTCCTTTGGGTTCCAGACCCTGCCTaGTTCGGTTTGGAATTCCTCCTAGATTCTTATTAC +
Preference number: 3 (lower is better)
Translates to: VENAVLWVPDPA*FGLEFLLDSYY
Trigger: GTAATAAGAATCTAGGAGGAATTCCAAACCGAAGCAGGCAGGGTCTGGAACCCAAAGGACAGCATTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 72 bp TCCTGGCCCAGATCCCTGAAGTCAGTCGGTGTCACGTaGATTCAGCATGCTAGGTTTATTTATTTAAATATG +
Preference number: 3 (lower is better)
Translates to: SWPRSLKSVGVT*IQHARFIYLNM
Trigger: CATATTTAAATAAATAAACCTAGCATGCTGAATGCACGTGACACCGACTGACTTCAGGGATCTGGGCCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 72 bp CTACAGAAAGCCATCCTGTTTCTTCCCTTTTCAGACTaGATGACAGAACTCTTACAATGCAGCTGTCTGAAC +
Preference number: 3 (lower is better)
Translates to: LQKAILFLPFSD*MTELLQCSCLN
Trigger: GTTCAGACAGCTGCATTGTAAGAGTTCTGTCATGCAGTCTGAAAAGGGAAGAAACAGGATGGCTTTCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR GCA 72 bp AAGTTTGTGCAAAAAGACTCTCTTCATTCAACGATGTaGACAGAAGAGGGGAATCCCAAGAGTCTATTTGCT +
Preference number: 3 (lower is better)
Translates to: KFVQKDSLHSTM*TEEGNPKSLFA
Trigger: AGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGAAGAGAGTCTTTTTGCACAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CCA 72 bp CAAATATTGTCTCAAAAGGTACAAATAGGTTGTACCTaGACCTTAAGCAGCATGATCACCTTGCTCTCACAA +
Preference number: 3 (lower is better)
Translates to: QILSQKVQIGCT*TLSSMITLLSQ
Trigger: TTGTGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTTTTGAGACAATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 72 bp TCTCATTCCGTTTATCATCAGTGGCACAATTTCAAGTaGAGTTTGTGCAAAAAGACTCTCTTCATTCAACGA +
Preference number: 3 (lower is better)
Translates to: SHSVYHQWHNFK*SLCKKTLFIQR
Trigger: TCGTTGAATGAAGAGAGTCTTTTTGCACAAACTTCACTTGAAATTGTGCCACTGATGATAAACGGAATGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR TCA 72 bp TTTTGTTATAGATGTTATAGCCACGTGTATTCTCTCTaGTGGACAGCTATAGCAGATCAGCTTATACTTGTC +
Preference number: 3 (lower is better)
Translates to: FCYRCYSHVYSL*WTAIADQLILV
Trigger: GACAAGTATAAGCTGATCTGCTATAGCTGTCCATCAGAGAGAATACACGTGGCTATAACATCTATAACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TGGCCGGGTAAAAACGACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTCGGCCCCACTCCGGCTaGGCCGCTCCAGGACCAACC +
Preference number: 4 (lower is better)
Translates to: WPGKNDNQTSKQGPAHLFRPHSG*AAPGPT
Trigger: GGTTGGTCCTGGAGCGGCGCAGCCGGAGTGGGGCCG...AAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR GCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCAAGCTCCTCCTGCAGGTaGCCCAGGATTGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPSSSCR*PRIVPP
Trigger: TGGGGGCACAATCCTGGGGCACCTGCAGGAGGAGCT...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTCAGAGACCCGCTTCCTaGTCAGGGTCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTQRPAS*SGSPGW
Trigger: CCAGCCAGGAGACCCTGACCAGGAAGCGGGTCTCTG...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACGGCCCCACTCCGGCTaGGCCGCTCCAGGACCAACC +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSRPHSG*AAPGPT
Trigger: GGTTGGTCCTGGAGCGGCGCAGCCGGAGTGGGGCCG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGTTAAACTGCCACTGGTaGTGGGAGCTCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AMHACAFLPTPETPTLAVLNCHW*WELSSP
Trigger: GGGGCTGCTGAGCTCCCAGCACCAGTGGCAGTTTAA...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACCAGCAGAGGGCGATCTaGTGCACCTTGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNQQRAI*CTLPRS
Trigger: GGACCTGGGCAAGGTGCAGCAGATCGCCCTCTGCTG...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAATTGGGGAGCCGGGTTTaGGGTCACTGTCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQLGSRV*GHCPPC
Trigger: GCAAGGGGGACAGTGACCCCAAACCCGGCTCCCCAA...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CAA 72 bp AGATCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTaGTCCAATGTCCACCACACTCCTGGCCCAGATCCC +
Preference number: 4 (lower is better)
Translates to: RSECPPAAKMAS*SNVHHTPGPDP
Trigger: GGGATCTGGGCCAGGAGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACGACCCCTGGCTTGTGTaGGGACCCACACCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNDPWLV*GPTPGN
Trigger: GTTACCAGGTGTGGGTCCTCACACAAGCCAGGGGTC...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTCCAGATTCTGGGCCATaGAGCTGCGGGCTCATATGG +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTPDSGP*SCGLIW
Trigger: CCATATGAGCCCGCAGCTTCATGGCCCAGAATCTGG...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACGTTCAACTCCAAGCCTaGAGCCCCGGATCCATCCCC +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNVQLQA*SPGSIP
Trigger: GGGGATGGATCCGGGGCTGCAGGCTTGGAGTTGAAC...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGGGGATGTTTCTGAAATaGGATCTCCCCTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AMHACAFLPTPETPTLAVGMFLK*DLPSPE
Trigger: CTCAGGGGAGGGGAGATCTCATTTCAGAAACATCCC...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTTGCCCAGTTTCATGTTaGGCAGCAGAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTCPVSC*AAEGDL
Trigger: CAGATCGCCCTCTGCTGCTCAACATGAAACTGGGCA...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCCTGGCCCAGATCCCTaGAGTCAGTCGGTGTCACGT +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFPGPDP*SQSVSR
Trigger: ACGTGACACCGACTGACTTCAGGGATCTGGGCCAGG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCCCATGCAGACCCCATaGTGCCAGCACTGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFPMQTP*CQHWHS
Trigger: AGAGTGCCAGTGCTGGCAGCATGGGGTCTGCATGGG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAATGCCAGGCCATaGATATGTCCCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AMHACAFLPTPETPTLAVRNARP*ICPLLS
Trigger: GCTGAGCAGGGGACATATGCATGGCCTGGCATTTCT...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCAGGTCACTGTCCCCCTTaGTCCTGTCTTGGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPGHCPP*SCLGLE
Trigger: CTCTAGACCAAGACAGGAGCAAGGGGGACAGTGACC...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCAGAGGGCGATCTGCTaGACCTTGCCCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFQRAIC*TLPRSI
Trigger: GATGGACCTGGGCAAGGTGCAGCAGATCGCCCTCTG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCGAAGGGCCCCTGGTTTaGACATGCCTCTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFEGPLV*TCLFPG
Trigger: CCCGGGAAAGAGGCATGTCCAAACCAGGGGCCCTTC...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACTCATCGCCGTTCTCATaGAGGGGGTTGACCGCATCG +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNSSPFS*RGLTAS
Trigger: CGATGCGGTCAACCCCCTCCATGAGAACGGCGATGA...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCCTGGACCTCACAGATaGAGCGGACCACCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFPGPHR*SGPPRS
Trigger: ACTTCGAGGTGGTCCGCTGCATCTGTGAGGTCCAGG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACGTCAGCAGGTTAAACTaGCACTGGTGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNVSRLN*HWCWEL
Trigger: GAGCTCCCAGCACCAGTGGCAGTTTAACCTGCTGAC...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAATTCCAGCACCTCTCCTaGTTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQFQHLS*FSLPSS
Trigger: GCTACTTGGGAGGCTGAAGCAGGAGAGGTGCTGGAA...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTAGTGCAGATGAGACCTaGCCAGCTTCCAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTSADET*PASKAD
Trigger: GTCTGCTTTGGAAGCTGGCCAGGTCTCATCTGCACT...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCTGGTCAGGGTCTCCTaGCTGGGCTTGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFLVRVS*LGLSEA
Trigger: AGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCAG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCATCACCAAGAAGCTGGTaGGTGGCCACGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPSPRSW*VATIFL
Trigger: CAAGAAGATCGTGGCCACCCACCAGCTTCTTGGTGA...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTCCCTTGCTCCTGTCTTaGTCTAGAGGCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLPLLLS*SRGQPR
Trigger: CCTGGGCTGGCCTCTAGACCAAGACAGGAGCAAGGG...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACCTGGGAGGTGTCACTaGTCTCCTCACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSPGRCH*SPHCRG
Trigger: GCCCCTGCAGTGAGGAGATCAGTGACACCTCCCAGG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTCTCATGGAGGGGGTTaGCCGCATCGTCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCSHGGG*PHRRGQ
Trigger: CTGCCCTCGACGATGCGGTCAACCCCCTCCATGAGA...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTCCCCTGGTTTGGACATaGCTCTTTCCCGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLPLVWT*LFPGLS
Trigger: AGAGAGCCCGGGAAAGAGGCATGTCCAAACCAGGGG...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCTTCCAGTAATCCCATaGAGACCCCATGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFLPVIP*RPHAAS
Trigger: GCTGGCAGCATGGGGTCTGCATGGGATTACTGGAAG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTAGCTGCTTGATACAATaGTTGAGCTGCGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTSCLIQ*LSCGSL
Trigger: CAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCT...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGCTTCATTCAACGATGTaGACAGAAGAGGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: AMHACAFLPTPETPTLAVLHSTM*TEEGNP
Trigger: GGGATTCCCCTCTTCTGTGCACATCGTTGAATGAAG...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAAGTTCCAGACCCTGCCTaGTTCGGTTTGGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQVPDPA*FGLEFL
Trigger: GAGGAATTCCAAACCGAAGCAGGCAGGGTCTGGAAC...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAACTGTCTGAACGTGCATaGCATGCACGCCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQLSERA*HARLCI
Trigger: AATGCACAGGCGTGCATGGCATGCACGTTCAGACAG...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTTCCCGGGCTTCCAACTaGGCTCCCACTTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLSRASN*APTSKL
Trigger: CAGCTTTGAAGTGGGAGCCCAGTTGGAAGCCCGGGA...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCGGTGGAGAAGGTTCCTaGGAGGTGTCACTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFGGEGS*EVSLIS
Trigger: GGAGATCAGTGACACCTCCCAGGAACCTTCTCCACC...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTGCAAGTCAGTGCAGATaGGACCTGGCCAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLASQCR*DLASFQ
Trigger: TTGGAAGCTGGCCAGGTCTCATCTGCACTGACTTGC...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCATGCGTAACTTCATCCTaGAGAGATTCCACATGGGTC +
Preference number: 4 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPCVTSS*RDSTWV
Trigger: GACCCATGTGGAATCTCTTCAGGATGAAGTTACGCA...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACTCCCCTCCCCTGAGTaGTGTTTCCAAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSLPSPE*CFQGWH
Trigger: GTGCCAGCCTTGGAAACAGCACTCAGGGGAGGGGAG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTTGTTAACAGCAGTGACTTTGGCCGGGTAAAAACGACAATCAGACCAGCAAGCCCAAGACTGCACCACTaGACTTCAGACTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LVNSSDFGRVKTTIRPASPRLHH*TSDWAT
Trigger: TGTCGCCCAGTCTGAAGTGCAGTGGTGCAGTCTTGG...GCTTGCTGGTCTGATTGTCGTTTTTACCCGGCCAAAGTCACTGCTGTTAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CCA 90 bp TGGCCGGGTAAAAACGACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTTCCCGGGCTTCCAACTaGGCTCCCACTTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: WPGKNDNQTSKQGPAHLFSRASN*APTSKL
Trigger: CAGCTTTGAAGTGGGAGCCCAGTTGGAAGCCCGGGA...AAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACCTTGTCTTTTGTAGTTaGGGAACTGGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNLVFCS*GTGRDP
Trigger: CGGGTCTCTGCCAGTTCCCCAACTACAAAAGACAAG...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCCTCATCTGGGTTGGTaGTCACATCCACATCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFPHLGW*SHPHLG
Trigger: GCCAAGATGTGGATGTGACCACCAACCCAGATGAGG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCATATTCCTTCACCTTTaGGGAGCCGGGTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFIFLHL*GAGFGV
Trigger: GACCCCAAACCCGGCTCCCCAAAGGTGAAGGAATAT...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTAACTGCCACTGGTGCTaGGAGCTCAGCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLNCHWC*ELSSPS
Trigger: AGAGGGGCTGCTGAGCTCCCAGCACCAGTGGCAGTT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAACGTGTTTTCTCCCATTaGTGGGCAGTTCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQRVFSH*WAVQLQ
Trigger: TTGGAGTTGAACTGCCCATCAATGGGAGAAAACACG...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTAGCCTCCCAAGTAGCTaGGATTACAGGCGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLSLPSS*DYRRPP
Trigger: TGGCGGACGCCTGTAATCTCAGCTACTTGGGAGGCT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTAGTCATCAACGGGGCTaGCTTTATTCTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLSHQRG*LYSPHG
Trigger: GCCGTGAGGAGAATAAAGGCAGCCCCGTTGATGACT...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCCTGGTAACAGCAAATaGCTTGGGTGGAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFPGNSK*LGWRRF
Trigger: GAACCTTCTCCACCCAAGGCATTTGCTGTTACCAGG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGAATGCAGACCCCATGCTaGCAGCACTGGCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARMQTPC*QHWHSS
Trigger: TGAAGAGTGCCAGTGCTGGCAGCATGGGGTCTGCAT...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCAGGGAGTTGGCATGTaGCCCAACGTGATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFQGVGM*PNVIEK
Trigger: CTTTTCTATCACGTTGGGGCACATGCCAACTCCCTG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGCTTTATCAGGCTGCTTaGGTCGCTTTTCTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: AMHACAFLPTPETPTLAVLYQAA*VAFLSL
Trigger: TAAAGACAGAAAAGCGACCCAAGCAGCCTGATAAAG...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTAGCTGCGGGCTCATATaGACCCCTGGCTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCSCGLI*TPGLCE
Trigger: CTCACACAAGCCAGGGGTCCATATGAGCCCGCAGCT...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAATTCACTTTCCCTTTGTaGTGTCCAGATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQFTFPL*CPDSGP
Trigger: TGGCCCAGAATCTGGACACCACAAAGGGAAAGTGAA...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTCAAGAAGCTGGTGGGTaGCCACGATCTTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLQEAGG*PRSSWH
Trigger: ATGCCAAGAAGATCGTGGCCACCCACCAGCTTCTTG...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTGAAAATGCTGTCCTTTaGGTTCCAGACCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLENAVL*VPDPAC
Trigger: GCAGGCAGGGTCTGGAACCCAAAGGACAGCATTTTC...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAATCCACAGTGCAATGTTaGCTCATCAAGGATCCACCT +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQSTVQC*LIKDPP
Trigger: AGGTGGATCCTTGATGAGCCAACATTGCACTGTGGA...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GCTCATTTATTTGAAATTCCTATAGTCCCAGGTACTCAGGAGGCTGAGGAAGGACCTGGACATGAAAAGTaGCCTCTTGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: AHLFEIPIVPGTQEAEEGPGHEK*PLGQAQ
Trigger: CTGTGCCTGGCCAAGAGGTCACTTTTCATGTCCAGG...TCCTTCCTCAGCCTCCTGAGTACCTGGGACTATAGGAATTTCAAATAAATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR TCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACCAAAGTTTGAGAGTTTaGATCCACAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNQSLRV*IHSSRS
Trigger: GCTCCTACTGCTGTGGATTCAAACTCTCAAACTTTG...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACAGCCAGCTCTGGGGTaGAGGCATACAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSQPALG*RHTNLS
Trigger: GGACAAGTTTGTATGCCTTCACCCCAGAGCTGGCTG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCCTTCTTTATCAGGCTaGTTGGGTCGCTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFPSLSG*LGRFSV
Trigger: GACAGAAAAGCGACCCAAGCAGCCTGATAAAGAAGG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTAGCGGCAGATCAGGATaGTCCCGGCTTTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLSGRSG*SRLCKM
Trigger: CATCTTGCAAAGCCGGGAGCATCCTGATCTGCCGCT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCTCAGTCGGTGTCACGTaGATTCAGCATGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFSVGVT*IQHARF
Trigger: AAACCTAGCATGCTGAATGCACGTGACACCGACTGA...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCATGCCATGCACGCCTGTaGATTTCTTCCCACGCCAGA +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSCHARL*ISSHAR
Trigger: TCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGCA...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTACAGAACTCTTACAATaGAGCTGTCTGAACGTGCAT +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTTELLQ*SCLNVH
Trigger: ATGCACGTTCAGACAGCTGCATTGTAAGAGTTCTGT...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACGTCACATCCACATCTTaGCCATACTCATCATCACTC +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNVTSTS*PYSSSL
Trigger: GAGTGATGATGAGTATGGCCAAGATGTGGATGTGAC...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTGCCAGGCCTCTGACCTaGAGGGTCTTGGCAAACATA +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLARPLT*RVLANI
Trigger: TATGTTTGCCAAGACCCTCCAGGTCAGAGGCCTGGC...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGACTCCCGCAGCCAAAATaGCCTCTTTGTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARLPQPK*PLCPMS
Trigger: GGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAG...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
3UTR CAA 72 bp CGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTaGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RCAQKRGIPRVY*LPLWQASRSEC
Trigger: ACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TGGCCGGGTAAAAACGACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTGGAGAGTGGATCACTTaGGGTCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: WPGKNDNQTSKQGPAHLFGEWIT*GQEFKT
Trigger: AGTCTTGAACTCCTGACCTCAAGTGATCCACTCTCC...AAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR TCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACAAAGCAGACTTCAACTaGCCTTCTTCAGATTCCTTG +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNKADFN*PSSDSL
Trigger: CAAGGAATCTGAAGAAGGTCAGTTGAAGTCTGCTTT...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTAGGATTGTGCCCCCATaGGTTTTGGGTGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCRIVPP*VLGAQF
Trigger: AAACTGGGCACCCAAAACTCATGGGGGCACAATCCT...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTACCTCCACAGCATGGTaGGCTCACAATATTCCTATG +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLTSTAW*AHNIPM
Trigger: CATAGGAATATTGTGAGCTCACCATGCTGTGGAGGT...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGACATGCATATGTCCCCTaGTCAGCCACTCCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARHAYVP*SATPCH
Trigger: ATGACAAGGAGTGGCTGAGCAGGGGACATATGCATG...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTACCTCAATCACTCTCTaGACATCACCAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLTSITL*TSPRSW
Trigger: CCAGCTTCTTGGTGATGTGCAGAGAGTGATTGAGGT...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGATTGAGCTGCAGGCCATaGAGAACCTCAATCACTCTC +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARLSCRP*RTSITL
Trigger: GAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAA...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGAGAAAATGATGCCTGCTaGCCAAACACCATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARENDAC*PNTMPG
Trigger: TCCTGGCATGGTGTTTGGGCAGCAGGCATCATTTTC...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCACTTCCCTTTTCAGACTaGATGACAGAACTCTTACAA +
Preference number: 4 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPLPFSD*MTELLQ
Trigger: TTGTAAGAGTTCTGTCATGCAGTCTGAAAAGGGAAG...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACTTGGGGAGTCTTCTCTaGTTCCCTAAGAACAAAAGT +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNLGSLL*FPKNKS
Trigger: ACTTTTGTTCTTAGGGAAGCAGAGAAGACTCCCCAA...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACACAGACGTGAGCCACTaGACCCAGCTGATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYTDVSH*TQLIVH
Trigger: GTGCACTATCAGCTGGGTGCAGTGGCTCACGTCTGT...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTCCATCCCCAAAGGAGTaGCAAGTCAGTGCAGATGAG +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLPSPKE*QVSADE
Trigger: CTCATCTGCACTGACTTGCCACTCCTTTGGGGATGG...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTATCAAGTTCCTCATCTaGGTTGGTGGTCACATCCAC +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLIKFLI*VGGHIH
Trigger: GTGGATGTGACCACCAACCCAGATGAGGAACTTGAT...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTACATCACCAAGAAGCTaGTGGGTGGCCACGATCTTC +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCTSPRS*WVATIF
Trigger: GAAGATCGTGGCCACCCACCAGCTTCTTGGTGATGT...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTACCTGCTCATTTATTTaGAATTCAGAAGATCCATCC +
Preference number: 4 (lower is better)
Translates to: SECPPAAKMASLSNVHHTTCSFI*NSEDPS
Trigger: GGATGGATCTTCTGAATTTCAAATAAATGAGCAGGT...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAAAGCTGGTGCATTAGATaGCCCAAAATCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQSWCIR*PKIICF
Trigger: AAAACAGATGATTTTGGGTCATCTAATGCACCAGCT...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACTGTCATACCAGTACTTaGAGCCAGGCCTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYCHTST*SQASDL
Trigger: CAGGTCAGAGGCCTGGCTTCAAGTACTGGTATGACA...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACATTATCCTCCTCCAATaGTTTCACTTTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNIILLQ*FHFPFV
Trigger: CACAAAGGGAAAGTGAAAGCATTGGAGGAGGATAAT...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTCCTGGGCTTCTCCACTaGCCCGTTCAAAGTTCTATA +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCPGLLH*PVQSSI
Trigger: TATAGAACTTTGAACGGGGCAGTGGAGAAGCCCAGG...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTGAAGTGGGTAGAAAATaGTGTCCTTTGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLEVGRK*CPLGSR
Trigger: TCTGGAACCCAAAGGACAGCATTTTCTACCCACTTC...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGATGGCCACGATCTTCTTaGCATTCTGATGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARWPRSS*HSDGSS
Trigger: ACTACTCCCATCAGAATGCCAAGAAGATCGTGGCCA...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GCTCATTTATTTGAAATTCCTATAGTCCCAGGTACTCAGGAGGCTGAGGAAGGACACTGCACTTCAGACTaGGCGACAGAGCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AHLFEIPIVPGTQEAEEGHCTSD*ATEQEN
Trigger: GTTTTCTTGCTCTGTCGCCCAGTCTGAAGTGCAGTG...TCCTTCCTCAGCCTCCTGAGTACCTGGGACTATAGGAATTTCAAATAAATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR TCA 90 bp GACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTGAAATTCCTATAGTCCAGTCAGCTCTGAGATaGTGTCACTGCATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: DNQTSKQGPAHLFEIPIVQSALR*CHCIPA
Trigger: GGCTGGAATGCAGTGACATCATCTCAGAGCTGACTG...GACTATAGGAATTTCAAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR TCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTCGTATCAACCAAATCTaGTACAACCAAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLRINQI*YNQVRI
Trigger: GATCCTGACTTGGTTGTATCAGATTTGGTTGATACG...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTAGCAATGCTCACTGGTaGTATAGGATTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLSNAHW*YRIPPQ
Trigger: CTGTGGAGGAATCCTATATCACCAGTGAGCATTGCT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTTGTCCCCAGTACCATaGAGTCATGCAAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLLSPVP*SHARDV
Trigger: CACATCTCTTGCATGACTTCATGGTACTGGGGACAA...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CGGGTAAAAACGACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTGAAAAGTCATCAACGGGGCTaGCTTTATTCTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: RVKTTIRPASKDLLIYLKSHQRG*LYSPCS
Trigger: GCTGCATGGAGAATAAAGGCAGCCCCGTTGATGACT...TTTCAAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR GCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACATGCTCATCTTGAGCTaGAGGCCATGCAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYMLILS*RPCRTS
Trigger: TGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCAT...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTAGGTCCATCAGCAGCTaGTTGATACAATGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCRSISS*LIQCLS
Trigger: GCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCT...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTAAGGAAAATGATGCCTaGTGCCCAAACACCATGCCA +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCKENDA*CPNTMP
Trigger: TGGCATGGTGTTTGGGCAGCAGGCATCATTTTCCTT...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACTTGGGTTCCAGACCCTaGCTGCTTCGGTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYLGSRP*LLRFGI
Trigger: AATTCCAAACCGAAGCAGGCAGGGTCTGGAACCCAA...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTGTCCACAATGACCTGTaGTTAACTATTCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLVHNDL*LTIPKV
Trigger: GACCTTTGGAATAGTTAAGCACAGGTCATTGTGGAC...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTGATATGTATCCACAGTaGAATGTTGGCTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLDMYPQ*NVGSSR
Trigger: CCTTGATGAGCCAACATTGCACTGTGGATACATATC...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AAGCAAGGACCTGCTCATTTATTTGAAATTCCTATAGTCCCAGGTACTCAGGAGCTGAGGAAGGAGGATTaGTTGAGCCCAAGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KQGPAHLFEIPIVPGTQELRKED*LSPRGQ
Trigger: TTGACCTCTTGGGCTCAAGCAATCCTCCTTCCTCAG...CTCCTGAGTACCTGGGACTATAGGAATTTCAAATAAATGAGCAGGTCCTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTGTTCCTCATCTGGGTTaGTGGTCACATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLVPHLG*WSHPHL
Trigger: AAGATGTGGATGTGACCACCAACCCAGATGAGGAAC...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAATATAGCAATTACATGTaGAACCGTAACCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQYSNYM*NRNLQK
Trigger: CTTTTGCAGGTTACGGTTCCACATGTAATTGCTATA...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTATTGGTTGCAAAGTTTaGGAGTTTGAATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLIGCKV*EFESTA
Trigger: TGCTGTGGATTCAAACTCTCAAACTTTGCAACCAAT...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCTTCTGCTTACATCGTTaGACAAGACATGAAATTGAC +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFFCLHR*TRHEID
Trigger: GTCAATTTCATGTCTTGTTCAACGATGTAAGCAGAA...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACTAGACAACGTGTCTTaGAAAGGATCCGTATCAACC +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSLDNVS*KGSVST
Trigger: GGTTGATACGGATCCTTTGCAAGACACGTTGTCTAG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGATCCCAAGAGTCTATTTaGTACCTTTATGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARSQESI*YLYGRL
Trigger: AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGA...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TGGCCGGGTAAAAACGACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTTCCTCGTCTGTTAGGTaGATGCTTTGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: WPGKNDNQTSKQGPAHLFSSSVR*MLCHFQ
Trigger: CTGAAAATGACAAAGCATCCACCTAACAGACGAGGA...AAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CCA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACCAGTTCCAATGTTATTaGTTGCAAAGTTTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: HACAFLPTPETPTLAVRNQFQCY*LQSLRV
Trigger: AACTCTCAAACTTTGCAACCAATAACATTGGAACTG...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTCAAAGTTCTATAGCTTaGAGCTTCCTCCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLQSSIA*SFLLAP
Trigger: AGGAGCAAGGAGGAAGCTCCAAGCTATAGAACTTTG...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACTGGTAGGGCCTTTTTaGAGACATATTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSLVGPF*RHIPSP
Trigger: AGGTGAAGGAATATGTCTCCAAAAAGGCCCTACCAG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACCTTTTCAGACTGCATaGCAGAACTCTTACAATGCA +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSPFQTA*QNSYNA
Trigger: TGCATTGTAAGAGTTCTGTCATGCAGTCTGAAAAGG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTATCAAGGATCCACCTTaGATACACTTACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: VHRRGESQESICYLYGRLIKDPP*IHLPLK
Trigger: TTTAAGTGGTAAGTGTATGCAAGGTGGATCCTTGAT...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTCCTCGTCTGTTAGGTaGATGCTTTGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLSSSVR*MLCHFQ
Trigger: CTGAAAATGACAAAGCATCCACCTAACAGACGAGGA...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTGGTTTCTTATCCACTTaGGCATCTCCAGAATACTCT +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLGFLST*ASPEYS
Trigger: AGAGTATTCTGGAGATGCCCAAGTGGATAAGAAACC...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCATTGCATCTAAACTTATaGTCTAGGTCGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSLHLNL*SRSTAG
Trigger: ACCAGCTGTCGACCTAGACCATAAGTTTAGATGCAA...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCGATAGTGCAACAGTTTaGCTTTGCGGAAAAATTTTA +
Preference number: 4 (lower is better)
Translates to: SSRLTGVATESHPVSSLFDSATV*LCGKIL
Trigger: TAAAATTTTTCCGCAAAGCCAAACTGTTGCACTATC...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTTGCTGTTTCCAAGGCTaGCACCACAGCGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFCCFQG*HHSGRS
Trigger: TGATCTGCCGCTGTGGTGCCAGCCTTGGAAACAGCA...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCACAAATAGGTTGTACCTaGACCTTAAGCAGCATGATC +
Preference number: 4 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSQIGCT*TLSSMI
Trigger: GATCATGCTGCTTAAGGTCCAGGTACAACCTATTTG...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTTACAATGCAGCTGTCTaGACGTGCATGCCATGCACG +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFYNAAV*TCMPCT
Trigger: CGTGCATGGCATGCACGTTCAGACAGCTGCATTGTA...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp AAGCAAGGACCTGCTCATTTATTTGAAATTCCTATAGTCCCAGGTACTCAGGAGTGCCTTTATTCTCCATaGAGCCTGGACATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KQGPAHLFEIPIVPGTQECLYSP*SLDMKS
Trigger: ACTTTTCATGTCCAGGCTGCATGGAGAATAAAGGCA...CTCCTGAGTACCTGGGACTATAGGAATTTCAAATAAATGAGCAGGTCCTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CCA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCCAACGCTTGAAATaGATGAGTACTTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCFQRLK*MSTFPS
Trigger: GGAAGGAAAAGTACTCATCCATTTCAAGCGTTGGAA...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTGATGAAAGACTTTTGTaGTCTGTTTCTTTAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SFNDVHRRGESQESICYLDERLL*SVSLGL
Trigger: TAGGCCTAAAGAAACAGATCACAAAAGTCTTTCATC...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTGGATCTAGGATCTCATaGGTCCCATTAGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFGSRIS*VPLVDS
Trigger: GCTGTCCACTAATGGGACCCATGAGATCCTAGATCC...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACAACAAAGTAGTGAAATaGGTCACTCCTCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYNKVVK*VTPQSM
Trigger: CATGCTTTGAGGAGTGACCCATTTCACTACTTTGTT...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACTGGCACAATTTCAAGTaGAGTTTGTGCAAAAAGACT +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYWHNFK*SLCKKT
Trigger: AGTCTTTTTGCACAAACTTCACTTGAAATTGTGCCA...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR GCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTAGGCTGTATGGGCTCTaGTACAAAAGCCATAACCCA +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFRLYGL*YKSHNP
Trigger: TGGGTTATGGCTTTTGTAGCAGAGCCCATACAGCCT...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CCA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACCCTCAAGTTTTCTTGTaGACTCTTCACAATGTCATT +
Preference number: 4 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYPQVFL*TLHNVI
Trigger: AATGACATTGTGAAGAGTCCACAAGAAAACTTGAGG...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp AAAACGACAATCAGACCAGCAAGCAAGGACCTGCTCATTTATTTGAAATTCCTAACCTGCTCATTTATTTaGAATTCCTATAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KTTIRPASKDLLIYLKFLTCSFI*NSYSPR
Trigger: CCTGGGACTATAGGAATTTCAAATAAATGAGCAGGT...TAGGAATTTCAAATAAATGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452270.5
3UTR CAA 72 bp AGTAACACAAATATTGTCTCAAAAGGTACAAATAGGTaGTACCTGGACCTTAAGCAGCATGATCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: SNTNIVSKGTNR*YLDLKQHDHLA
Trigger: AGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTTTTGAGACAATATTTGTGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTTGGCACTCTTCACACTaGATCATGAAGTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFWHSSH*IMKSFS
Trigger: GGAAAATGACTTCATGATTCAGTGTGAAGAGTGCCA...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTTTTAGTACAGAGGCCTaGATTCATGTCCACAATGAC +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFFSTEA*IHVHND
Trigger: GTCATTGTGGACATGAATTCAGGCCTCTGTACTAAA...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR TCA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTAATTCATGTCCACAATaGCCTGTGCTTAACTATTCC +
Preference number: 4 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFNSCPQ*PVLNYS
Trigger: GGAATAGTTAAGCACAGGTCATTGTGGACATGAATT...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp CTCCGGCTGCGCCGCTCCAGGACCAACCGACAGAAGGACTCTGCGTaGTCTGCACCACGTGACCCCCGGGACGCGCCCAGCGTATGCCCC +
Preference number: 5 (lower is better)
Translates to: LRLRRSRTNRQKDSA*SAPRDPRDAPSVCP
Trigger: GGGGCATACGCTGGGCGCGTCCCGGGGGTCACGTGGTGCAGAGCACGCAGAGTCCTTCTGTCGGTTGGTCCTGGAGCGGCGCAGCCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS GCA 90 bp ATCTGCTGCACCTTGCCCAGGTCCATCAGCAGCTGCTTGATACAATaGTTGAGCTGCGGAAGCCTGGCCAGCGGCTCAGGGGGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: ICCTLPRSISSCLIQ*LSCGSLASGSGGSS
Trigger: ACTGGAGCCCCCTGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp CAGCAGAGGGCGATCTGCTGCACCTTGCCCAGGTCCATCAGCAGCTaGTTGATACAATGCTTGAGCTGCGGAAGCCTGGCCAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: QQRAICCTLPRSISS*LIQCLSCGSLASGS
Trigger: TGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGATCGCCCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CCA 90 bp TGGTCAGGGTCTCCTGGCTGGGCTTGTCTGAAGCTGAAGGGCCCCTaGTTTGGACATGCCTCTTTCCCGGGCTCTCTTCTGGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: WSGSPGWACLKLKGP*FGHASFPGSLLAPV
Trigger: CACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS CCA 90 bp TTGGGGAACTGGCAGAGACCCGCTTCCTGGTCAGGGTCTCCTGGCTaGGCTTGTCTGAAGCTGAAGGGCCCCTGGTTTGGACATGCCTCT +
Preference number: 5 (lower is better)
Translates to: LGNWQRPASWSGSPG*ACLKLKGPWFGHAS
Trigger: AGAGGCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCAGGAAGCGGGTCTCTGCCAGTTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS CCA 90 bp GTAGTTGGGGAACTGGCAGAGACCCGCTTCCTGGTCAGGGTCTCCTaGCTGGGCTTGTCTGAAGCTGAAGGGCCCCTGGTTTGGACATGC +
Preference number: 5 (lower is better)
Translates to: VVGELAETRFLVRVS*LGLSEAEGPLVWTC
Trigger: GCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCAGGAAGCGGGTCTCTGCCAGTTCCCCAACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS CCA 90 bp AGGGTCTCCTGGCTGGGCTTGTCTGAAGCTGAAGGGCCCCTGGTTTaGACATGCCTCTTTCCCGGGCTCTCTTCTGGCTCCAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: RVSWLGLSEAEGPLV*TCLFPGLSSGSSDF
Trigger: GAAGTCACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS TCA 90 bp TTCTGGGCCATGAAGCTGCGGGCTCATATGGACCCCTGGCTTGTGTaGGGACCCACACCTGGTAACAGCAAATGCCTTGGGTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: FWAMKLRAHMDPWLV*GPTPGNSKCLGWRR
Trigger: CCTTCTCCACCCAAGGCATTTGCTGTTACCAGGTGTGGGTCCTCACACAAGCCAGGGGTCCATATGAGCCCGCAGCTTCATGGCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp TCCTGGCTGGGCTTGTCTGAAGCTGAAGGGCCCCTGGTTTGGACATaGCTCTTTCCCGGGCTCTCTTCTGGCTCCAGTGACTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: SWLGLSEAEGPLVWT*LFPGLSSGSSDFSI
Trigger: AATGGAGAAGTCACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS GCA 90 bp CCTGAGTGCTGTTTCCAAGGCTGGCACCACAGCGGCAGATCAGGATaGTCCCGGCTTCTGTTGAGAGGACAAAGAGGACATGGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: PECCFQGWHHSGRSG*SRLLLRGQRGHGLW
Trigger: CCAAAGCCCATGTCCTCTTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCGCTGTGGTGCCAGCCTTGGAAACAGCACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473943.1
CDS-3UTR CAA 90 bp AGAGTCCTAAGGAGAAAGCAGGGCAGCCAAGACTCTGCTCTTTCCCAACCTCCATTCTCATGGAGGGGGTaGACCGCATCGTCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RVLRRKQGSQDSALSQPPFSWRG*TASSRA
Trigger: TGCCCTCGACGATGCGGTCAACCCCCTCCATGAGAA...TGGAGGTTGGGAAAGAGCAGAGTCTTGGCTGCCCTGCTTTCTCCTTAGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 90 bp TGCAGCCCCGGATCCATCCCCAAAGGAGTGGCAAGTCAGTGCAGATaGGACCTGGCCAGCTTCCAAAGCAGACTTCAACTGACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CSPGSIPKGVASQCR*DLASFQSRLQLTFF
Trigger: GAAGAAGGTCAGTTGAAGTCTGCTTTGGAAGCTGGCCAGGTCTCATCTGCACTGACTTGCCACTCCTTTGGGGATGGATCCGGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000485604.1
CDS TCA 90 bp GGTGTCAGTGACAGGGATGTTTCTGAAATGAGATCTCCCCTCCCCTaGGTGCTGTTTCCAAGGCTGGCACCACAGCGGCAGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: GVSDRDVSEMRSPLP*VLFPRLAPQRQIRM
Trigger: CATCCTGATCTGCCGCTGTGGTGCCAGCCTTGGAAACAGCACTCAGGGGAGGGGAGATCTCATTTCAGAAACATCCCTGTCACTGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000473943.1
CDS TCA 90 bp AAGGCTGGCACCACAGCGGCAGATCAGGATGCTCCCGGCTTCTGTTaGGAGGACAAAGAGGACATGGGCTTTGGAGTAACTGGCACCATT +
Preference number: 5 (lower is better)
Translates to: KAGTTAADQDAPGFC*EDKEDMGFGVTGTI
Trigger: AATGGTGCCAGTTACTCCAAAGCCCATGTCCTCTTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCGCTGTGGTGCCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473943.1
CDS CCA 90 bp GACCCACACCTGGTAACAGCAAATGCCTTGGGTGGAGAAGGTTCCTaGGAGGTGTCACTGATCTCCTCACTGCAGGGGCATTCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: DPHLVTANALGGEGS*EVSLISSLQGHSGL
Trigger: CAAACCTGAATGCCCCTGCAGTGAGGAGATCAGTGACACCTCCCAGGAACCTTCTCCACCCAAGGCATTTGCTGTTACCAGGTGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 90 bp TCCAATGCTTTCACTTTCCCTTTGTGGTGTCCAGATTCTGGGCCATaGAGCTGCGGGCTCATATGGACCCCTGGCTTGTGTGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: SNAFTFPLWCPDSGP*SCGLIWTPGLCEDP
Trigger: TGGGTCCTCACACAAGCCAGGGGTCCATATGAGCCCGCAGCTTCATGGCCCAGAATCTGGACACCACAAAGGGAAAGTGAAAGCATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp GGATGCTCCCGGCTTTGCAAGATGCTCATCTTGAGCTGCAGGCCATaGAGAACCTCAATCACTCTCTGCACATCACCAAGAAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GCSRLCKMLILSCRP*RTSITLCTSPRSWW
Trigger: CCACCAGCTTCTTGGTGATGTGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp GTTTTGGGTGCCCAGTTTCATGTTGAGCAGCAGAGGGCGATCTGCTaGACCTTGCCCAGGTCCATCAGCAGCTGCTTGATACAATGCTTG +
Preference number: 5 (lower is better)
Translates to: VLGAQFHVEQQRAIC*TLPRSISSCLIQCL
Trigger: CAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGATCGCCCTCTGCTGCTCAACATGAAACTGGGCACCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp ATGCTCATCTTGAGCTGCAGGCCATGCAGAACCTCAATCACTCTCTaGACATCACCAAGAAGCTGGTGGGTGGCCACGATCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: MLILSCRPCRTSITL*TSPRSWWVATIFLA
Trigger: TGCCAAGAAGATCGTGGCCACCCACCAGCTTCTTGGTGATGTGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp GGCAGATCAGGATGCTCCCGGCTTTGCAAGATGCTCATCTTGAGCTaGAGGCCATGCAGAACCTCAATCACTCTCTGCACATCACCAAGA +
Preference number: 5 (lower is better)
Translates to: GRSGCSRLCKMLILS*RPCRTSITLCTSPR
Trigger: TCTTGGTGATGTGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCCTGATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGAGTCTCCTGGCTGGGCTaGTCTGAAGCTGAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARVSWLG*SEAEGP
Trigger: GGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGAC...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGTCCATCAGCAGCTGCTaGATACAATGCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: AMHACAFLPTPETPTLAVSISSC*IQCLSC
Trigger: GCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGA...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTTTCTTCCCTTTTCCATATTCCTTCACCTTaGGGGAGCCGGGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SSRLTGVATESHPVSSLFHIPSP*GSRVWG
Trigger: ACCCCAAACCCGGCTCCCCAAAGGTGAAGGAATATG...GAAAAGGGAAGAAACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CCA 90 bp CCTCGAAGTCATAGCGGTCATCCCCATCAAGTTCCTCATCTGGGTTaGTGGTCACATCCACATCTTGGCCATACTCATCATCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: PRSHSGHPHQVPHLG*WSHPHLGHTHHHSR
Trigger: TCTGGAGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGATGACCGCTATGACTTCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CCA 90 bp GACCACCTCGAAGTCATAGCGGTCATCCCCATCAAGTTCCTCATCTaGGTTGGTGGTCACATCCACATCTTGGCCATACTCATCATCACT +
Preference number: 5 (lower is better)
Translates to: DHLEVIAVIPIKFLI*VGGHIHILAILIIT
Trigger: AGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGATGACCGCTATGACTTCGAGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS-3UTR CAA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGACTAGACAACGTGTCTaGCAAAGGATCCGTATCAAC +
Preference number: 5 (lower is better)
Translates to: AMHACAFLPTPETPTLAVTRQRV*QRIRIN
Trigger: GTTGATACGGATCCTTTGCAAGACACGTTGTCTAGT...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAACTGACCTGGAGGGTCTaGGCAAACATAACAGGTGTA +
Preference number: 5 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQLTWRV*ANITGV
Trigger: TACACCTGTTATGTTTGCCAAGACCCTCCAGGTCAG...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp CACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAGAAACCTGCTCAGCCACTCCTaGTCATACCAGTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: HACAFLPTPETPTLAVRNLLSHS*SYQYLK
Trigger: CTTCAAGTACTGGTATGACAAGGAGTGGCTGAGCAG...GTTTCTCACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTTCAAAGTTCTATAGCTaGGAGCTTCCTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SECPPAAKMASLSNVHHTSKFYS*ELPPCS
Trigger: GGAGCAAGGAGGAAGCTCCAAGCTATAGAACTTTGA...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAACCTGCCTGCTTCGGTTaGGAATTCCTCCTAGATTCT +
Preference number: 5 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQPACFG*EFLLDS
Trigger: AGAATCTAGGAGGAATTCCAAACCGAAGCAGGCAGG...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 90 bp TCCAACTCCTTCTCAATGGAGTCCATCCTGTGCGTAACTTCATCCTaGAGAGATTCCACATGGGTCAGCAGGTTAAACTGCCACTGGTGC +
Preference number: 5 (lower is better)
Translates to: SNSFSMESILCVTSS*RDSTWVSRLNCHWC
Trigger: GCACCAGTGGCAGTTTAACCTGCTGACCCATGTGGAATCTCTTCAGGATGAAGTTACGCACAGGATGGACTCCATTGAGAAGGAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CCA 90 bp TCCCCATCAAGTTCCTCATCTGGGTTGGTGGTCACATCCACATCTTaGCCATACTCATCATCACTCCAGAGAAAGCTCTCAGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SPSSSSSGLVVTSTS*PYSSSLQRKLSEED
Trigger: GTCCTCTTCTGAGAGCTTTCTCTGGAGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CCA 90 bp CGAAGTCATAGCGGTCATCCCCATCAAGTTCCTCATCTGGGTTGGTaGTCACATCCACATCTTGGCCATACTCATCATCACTCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: RSHSGHPHQVPHLGW*SHPHLGHTHHHSRE
Trigger: TTCTCTGGAGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGATGACCGCTATGACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CCA 90 bp GCAGAACCTCAATCACTCTCTGCACATCACCAAGAAGCTGGTGGGTaGCCACGATCTTCTTGGCATTCTGATGGGAGTAGTTCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: AEPQSLSAHHQEAGG*PRSSWHSDGSSSLL
Trigger: TAGAAGAGAACTACTCCCATCAGAATGCCAAGAAGATCGTGGCCACCCACCAGCTTCTTGGTGATGTGCAGAGAGTGATTGAGGTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CCA 90 bp CAGTGTAAGTACCTGCCTCAGAGTAAACCAGTGCTTCTCAAAGTGTaGTCCCACAGCAGCAGCATGAGCAACTCCTGGGAACTCATTAGA +
Preference number: 5 (lower is better)
Translates to: QCKYLPQSKPVLLKV*SHSSSMSNSWELIR
Trigger: TCTAATGAGTTCCCAGGAGTTGCTCATGCTGCTGCTGTGGGACCACACTTTGAGAAGCACTGGTTTACTCTGAGGCAGGTACTTACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480940.1
CDS-3UTR CAA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTTCTTTATCAGGCTGCTaGGGTCGCTTTTCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SECPPAAKMASLSNVHHTSLSGC*GRFSVF
Trigger: AAAGACAGAAAAGCGACCCAAGCAGCCTGATAAAGA...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTCTGCCTCGTTTTCTTTaGGGTTCCCTCAAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SECPPAAKMASLSNVHHTLPRFL*GSLKFS
Trigger: AGAAAACTTGAGGGAACCCAAAAGAAAACGAGGCAG...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp CTCTTTCCCAACCTCCACAGCATGGTGAGCTCACAATATTCCTATGAAGCTAGATGCTTGATACAATGCTaGAGCTGCGGAAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LFPNLHSMVSSQYSYEARCLIQC*SCGSLA
Trigger: GGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCA...TCTAGCTTCATAGGAATATTGTGAGCTCACCATGCTGTGGAGGTTGGGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 90 bp CTCGTAGTCAATGTCTTCTATGTGAGCTGGATACCTGTTTTTAAATaGGTGGGCTACCTCGGGAAGGAGGATCAAGTAACCCGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: LVVNVFYVSWIPVFK*VGYLGKEDQVTRFA
Trigger: GGCAAACCGGGTTACTTGATCCTCCTTCCCGAGGTAGCCCACGCATTTAAAAACAGGTATCCAGCTCACATAGAAGACATTGACTACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS-3UTR CAA 90 bp CTATTTGCTACCTTTATGGCAGGCTTCGAGATCAGAGTGTCCTCCCGCAGCCAACCTTCTTCAGATTCCTaGGTACTAGACAACGTGTCT +
Preference number: 5 (lower is better)
Translates to: LFATFMAGFEIRVSSRSQPSSDS*VLDNVS
Trigger: AGACACGTTGTCTAGTACCAAGGAATCTGAAGAAGG...TTGGCTGCGGGAGGACACTCTGATCTCGAAGCCTGCCATAAAGGTAGCAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTCTTGGAGCTTCCTCCTaGCTCCTGGTGTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCLGASS*LLVSVT
Trigger: TGTCACTGACACCAGGAGCAAGGAGGAAGCTCCAAG...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTGCCAAAATGGCCTCTTaGTCCAATGTCCACCACACT +
Preference number: 5 (lower is better)
Translates to: VHRRGESQESICYLYGRLAKMAS*SNVHHT
Trigger: AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGC...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 90 bp TTGTCCTACTGGTATAGCTTCTTGGACCTAAAATCTCTCTCCTGCTaGGGCCTCATGCAGCTGCACACTCAAGTACTTCCCAAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSYWYSFLDLKSLSC*GLMQLHTQVLPKRK
Trigger: CTTCCTTTTGGGAAGTACTTGAGTGTGCAGCTGCATGAGGCCTCAGCAGGAGAGAGATTTTAGGTCCAAGAAGCTATACCAGTAGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617560.1
CDS GCA 90 bp AACTGGGCTCCCACTTCAAAGCTGATTCCTCGTCTGTTAGGTGGATaGTTTGTCATTTTCAGTCATCAACGGGGCTGCCTTTATTCTCCA +
Preference number: 5 (lower is better)
Translates to: NWAPTSKLIPRLLGG*FVIFSHQRGCLYSP
Trigger: TGGAGAATAAAGGCAGCCCCGTTGATGACTGAAAATGACAAAGCATCCACCTAACAGACGAGGAATCAGCTTTGAAGTGGGAGCCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339089.10
ENST00000452270.5
CDS GCA 90 bp AACTGGGCTCCCACTTCAAAGCTGATTCCTCGTCTGTTAGGTGGATaGTTTGTCATTTTCAGTCATCAACGGGGCTGCCTTTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: NWAPTSKLIPRLLGG*FVIFSHQRGCLYSP
Trigger: AGGAGAATAAAGGCAGCCCCGTTGATGACTGAAAATGACAAAGCATCCACCTAACAGACGAGGAATCAGCTTTGAAGTGGGAGCCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374012.8
ENST00000461405.1
ENST00000481202.5
CDS GCA 90 bp AACTGGGCTCCCACTTCAAAGCTGATTCCTCGTCTGTTAGGTGGATaGTTTGTCATTTTCAGTCATCAACGGGGCTGCCTTTATTCTCGT +
Preference number: 5 (lower is better)
Translates to: NWAPTSKLIPRLLGG*FVIFSHQRGCLYSR
Trigger: ACGAGAATAAAGGCAGCCCCGTTGATGACTGAAAATGACAAAGCATCCACCTAACAGACGAGGAATCAGCTTTGAAGTGGGAGCCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374000.8
CDS GCA 90 bp CTGTCCTTGGATCTGTCATTTAGTAACAGCCCAAACGAAGCATGCTaGCTGGCAGTGAACTCAACTCCACTTCCTCATTTCACTGAGAGA +
Preference number: 5 (lower is better)
Translates to: LSLDLSFSNSPNEAC*LAVNSTPLPHFTER
Trigger: TCTCTCAGTGAAATGAGGAAGTGGAGTTGAGTTCACTGCCAGGCAGCATGCTTCGTTTGGGCTGTTACTAAATGACAGATCCAAGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420233.1
CDS CCA 90 bp GTATCAACCAAATCTGATACAACCAAGTCAGGATCTAGGATCTCATaGGTCCCATTAGTGGACAGCCTGGAGGAACGTCTCCTCGATAAG +
Preference number: 5 (lower is better)
Translates to: VSTKSDTTKSGSRIS*VPLVDSLEERLLDK
Trigger: CTTATCGAGGAGACGTTCCTCCAGGCTGTCCACTAATGGGACCCATGAGATCCTAGATCCTGACTTGGTTGTATCAGATTTGGTTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000485604.1
ENST00000486408.5
CDS-3UTR CAA 90 bp GCCATGCACGCCTGTGCATTTCTTCCCACGCCAGAAACACCAACGTTAGCAGTGAAACAGTCCACAACTTaGCATCTAAACTTATGGTCT +
Preference number: 5 (lower is better)
Translates to: AMHACAFLPTPETPTLAVKQSTT*HLNLWS
Trigger: AGACCATAAGTTTAGATGCAAAGTTGTGGACTGTTT...CACTGCTAACGTTGGTGTTTCTGGCGTGGGAAGAAATGCACAGGCGTGCATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTGTAACAGCAAATGCCTaGGGTGGAGAAGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SFNDVHRRGESQESICYLVTANA*GGEGSW
Trigger: CCAGGAACCTTCTCCACCCAAGGCATTTGCTGTTAC...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCAAGGATGCTCCCGGCTTaGCAAGATGCTCATCTTGAG +
Preference number: 5 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSRMLPA*QDAHLE
Trigger: CTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCCT...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTTCTGGTAGGGCCTTTTaGGAGACATATTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: VHRRGESQESICYLYGRLSGRAF*ETYSFT
Trigger: GGTGAAGGAATATGTCTCCAAAAAGGCCCTACCAGA...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCAGAGTGTCCTCCCGCAGCCAAAATGGCCTCTTTGTCCAATGTCCACCACACTTGCAACAGTTTGGCTTaGCGGAAAAATTTTAAACAG +
Preference number: 5 (lower is better)
Translates to: SECPPAAKMASLSNVHHTCNSLA*RKNFKQ
Trigger: CTGTTTAAAATTTTTCCGCAAAGCCAAACTGTTGCA...AGTGTGGTGGACATTGGACAAAGAGGCCATTTTGGCTGCGGGAGGACACTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 90 bp GACAGTCACCCTGACACTGGGATCCCTGCATCAAAGAGAAAAGACTaGCATTTCCTCACATCTTCCAAGAGTCAGGAAGTAGAAAAACAC +
Preference number: 5 (lower is better)
Translates to: DSHPDTGIPASKRKD*HFLTSSKSQEVEKH
Trigger: GTGTTTTTCTACTTCCTGACTCTTGGAAGATGTGAGGAAATGTCAGTCTTTTCTCTTTGATGCAGGGATCCCAGTGTCAGGGTGACTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461405.1
CDS CCA 90 bp GATGAGTACTTTTCCTTCCTCGTAGTCAATGTCTTCTATGTGAGCTaGATACCTGTTTTTAAATGCGTGGGCTACCTCGGGAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: DEYFSFLVVNVFYVS*IPVFKCVGYLGKED
Trigger: ATCCTCCTTCCCGAGGTAGCCCACGCATTTAAAAACAGGTATCCAGCTCACATAGAAGACATTGACTACGAGGAAGGAAAAGTACTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS-3UTR CAA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTCGATGGTTCCAACGCTaGAAATGGATGAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: VHRRGESQESICYLYGRLRWFQR*KWMSTF
Trigger: AAAAGTACTCATCCATTTCAAGCGTTGGAACCATCG...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACGCTTTCACTTTCCCTTaGTGGTGTCCAGATTCTGGG +
Preference number: 5 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYAFTFP*WCPDSG
Trigger: CCCAGAATCTGGACACCACAAAGGGAAAGTGAAAGC...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACATCCACAGTGCAATGTaGGCTCATCAAGGATCCACC +
Preference number: 5 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYIHSAM*AHQGST
Trigger: GGTGGATCCTTGATGAGCCAACATTGCACTGTGGAT...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GCTCATTTATTTGAAATTCCTATAGTCCCAGGTACTCAGGAGGCTGAGGAAGGAGAGTTCAAGACTAGCTaGGCGAATATGGTGAAAACC +
Preference number: 5 (lower is better)
Translates to: AHLFEIPIVPGTQEAEEGEFKTS*ANMVKT
Trigger: GGTTTTCACCATATTCGCCAAGCTAGTCTTGAACTC...TCCTTCCTCAGCCTCCTGAGTACCTGGGACTATAGGAATTTCAAATAAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CAA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTAGGTTTCTTATCCACTaGGGCATCTCCAGAATACTC +
Preference number: 5 (lower is better)
Translates to: SFNDVHRRGESQESICYLRFLIH*GISRIL
Trigger: GAGTATTCTGGAGATGCCCAAGTGGATAAGAAACCT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTATCCCAAGAGTCTATTaGCTACCTTTATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SFNDVHRRGESQESICYLIPRVY*LPLWQA
Trigger: AGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGAT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTTATGGCAGGCTTTCAGTTCCAATGTTATaGGTTGCAAAGTTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: VHRRGESQESICYLYGRLSVPML*VAKFES
Trigger: ACTCTCAAACTTTGCAACCAATAACATTGGAACTGA...AAGCCTGCCATAAAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp AAGCAAGGACCTGCTCATTTATTTGAAATTCCTATAGTCCCAGGTACTCAGGAGCGATGGTTCCAACGCTaGAAATGGATGAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: KQGPAHLFEIPIVPGTQERWFQR*KWMSTF
Trigger: AAAAGTACTCATCCATTTCAAGCGTTGGAACCATCG...CTCCTGAGTACCTGGGACTATAGGAATTTCAAATAAATGAGCAGGTCCTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS-3UTR CAA 90 bp ATAGATATGTATCCACAGTGCAATGTTGGCTCATCAAGGATCCACCTTGCATACTTCCCTCAAGTTTTCTaGTGGACTCTTCACAATGTC +
Preference number: 5 (lower is better)
Translates to: IDMYPQCNVGSSRIHLAYFPQVF*WTLHNV
Trigger: GACATTGTGAAGAGTCCACAAGAAAACTTGAGGGAA...GTATGCAAGGTGGATCCTTGATGAGCCAACATTGCACTGTGGATACATATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp AATAATACAACAATCATCACGCCTCACAGGTGTGGCTACAGAAAGCCATCCTGTGACCTGCTCATTTATTaGAAATTCAGAAGATCCATC +
Preference number: 5 (lower is better)
Translates to: NNTTIITPHRCGYRKPSCDLLIY*KFRRSI
Trigger: GATGGATCTTCTGAATTTCAAATAAATGAGCAGGTC...ACAGGATGGCTTTCTGTAGCCACACCTGTGAGGCGTGATGATTGTTGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp AAGGTACAAATAGGTTGTACCTGGACCTTAAGCAGCATGATCACCTTGCTCTCATTTCCGAGTAGTTTTTaGACTTTTCCTGGGATGAAT +
Preference number: 5 (lower is better)
Translates to: KVQIGCTWTLSSMITLLSFPSSF*TFPGMN
Trigger: ATTCATCCCAGGAAAAGTCAAAAAACTACTCGGAAA...TGAGAGCAAGGTGATCATGCTGCTTAAGGTCCAGGTACAACCTATTTGTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTAGTTCCTCATCTGGGTaGGTGGTCACATCCACATCT +
Preference number: 5 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFSSSSG*VVTSTS
Trigger: AGATGTGGATGTGACCACCAACCCAGATGAGGAACT...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp TCATTCAACGATGTGCACAGAAGAGGGGAATCCCAAGAGTCTATTTGCTACCTTATGGACAACTGTGCTTaGATTTTTGCCTTTAGTGAT +
Preference number: 5 (lower is better)
Translates to: SFNDVHRRGESQESICYLMDNCA*IFAFSD
Trigger: ATCACTAAAGGCAAAAATCAAAGCACAGTTGTCCAT...AAGGTAGCAAATAGACTCTTGGGATTCCCCTCTTCTGTGCACATCGTTGAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTGGTCACATCCACATCTaGGCCATACTCATCATCACT +
Preference number: 5 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFGHIHI*AILIIT
Trigger: AGTGATGATGAGTATGGCCAAGATGTGGATGTGACC...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTTCCTGGGATGAATTTTaGTCAAGCCGAGGACGTTTT +
Preference number: 5 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFSWDEF*SSRGRF
Trigger: AAAACGTCCTCGGCTTGACAAAAATTCATCCCAGGA...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTAAAGGTACAAATAGGTaGTACCTGGACCTTAAGCAG +
Preference number: 5 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFKGTNR*YLDLKQ
Trigger: CTGCTTAAGGTCCAGGTACAACCTATTTGTACCTTT...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS-3UTR CAA 90 bp GAAAACAAAGTAGTGAAATGGGTCACTCCTCAAAGCATGGAACATTTTAACTTTAGCAGCATGATCACCTaGCTCTCACAAAATAATACA +
Preference number: 5 (lower is better)
Translates to: ENKVVKWVTPQSMEHFNFSSMIT*LSQNNT
Trigger: TGTATTATTTTGTGAGAGCAAGGTGATCATGCTGCT...AAAGTTAAAATGTTCCATGCTTTGAGGAGTGACCCATTTCACTACTTTGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp CGCCGCTCCAGGACCAACCGACAGAAGGACTCTGCGTaGTCTGCACCACGTGACCCCCGGGACGCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RRSRTNRQKDSA*SAPRDPRDAPS
Trigger: GCTGGGCGCGTCCCGGGGGTCACGTGGTGCAGAGCACGCAGAGTCCTTCTGTCGGTTGGTCCTGGAGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS CCA 72 bp CCCAGGCGCGGGGAAAGGGAATCATCGCCGTTCTCATaGAGGGGGTTGACCGCATCGTCGAGGGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: PRRGERESSPFS*RGLTASSRAEP
Trigger: GGGCTCTGCCCTCGACGATGCGGTCAACCCCCTCCATGAGAACGGCGATGATTCCCTTTCCCCGCGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000473943.1
CDS GCA 72 bp GGGCTGCCTTTATTCTCCTCACGGCCCCACTCCGGCTaGGCCGCTCCAGGACCAACCGACAGAAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: GLPLFSSRPHSG*AAPGPTDRRTL
Trigger: CAGAGTCCTTCTGTCGGTTGGTCCTGGAGCGGCGCAGCCGGAGTGGGGCCGTGAGGAGAATAAAGGCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000461405.1
CDS GCA 72 bp TGTCACTGCATTCCAGCCTCACGGCCCCACTCCGGCTaGGCCGCTCCAGGACCAACCGACAGAAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: CHCIPASRPHSG*AAPGPTDRRTL
Trigger: CAGAGTCCTTCTGTCGGTTGGTCCTGGAGCGGCGCAGCCGGAGTGGGGCCGTGAGGCTGGAATGCAGTGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452270.5
CDS CAA 90 bp TGCTGCACCTTGCCCAGGTCCATCAGCAGCTGCTTGATACAATGCTaGAGCTGCGGAAGCCTGGCCAGCGGCTCAGGGGGCTCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: CCTLPRSISSCLIQC*SCGSLASGSGGSSS
Trigger: GGAACTGGAGCCCCCTGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CAA 90 bp CAGAGGGCGATCTGCTGCACCTTGCCCAGGTCCATCAGCAGCTGCTaGATACAATGCTTGAGCTGCGGAAGCCTGGCCAGCGGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: QRAICCTLPRSISSC*IQCLSCGSLASGSG
Trigger: CCCTGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGATCGCCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp GGGAAAGGGAATCATCGCCGTTCTCATGGAGGGGGTTaGCCGCATCGTCGAGGGCAGAGCCCCTCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: GKGNHRRSHGGG*PHRRGQSPSSP
Trigger: TGGAGACGAGGGGCTCTGCCCTCGACGATGCGGTCAACCCCCTCCATGAGAACGGCGATGATTCCCTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000473943.1
CDS CCA 72 bp TGGCAGAGACCCGCTTCCTGGTCAGGGTCTCCTGGCTaGGCTTGTCTGAAGCTGAAGGGCCCCTGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: WQRPASWSGSPG*ACLKLKGPWFG
Trigger: TCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCAGGAAGCGGGTCTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS CCA 72 bp GAACTGGCAGAGACCCGCTTCCTGGTCAGGGTCTCCTaGCTGGGCTTGTCTGAAGCTGAAGGGCCCCTGGTT +
Preference number: 6 (lower is better)
Translates to: ELAETRFLVRVS*LGLSEAEGPLV
Trigger: AACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCAGGAAGCGGGTCTCTGCCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS CAA 72 bp TTGCCCAGGTCCATCAGCAGCTGCTTGATACAATGCTaGAGCTGCGGAAGCCTGGCCAGCGGCTCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: LPRSISSCLIQC*SCGSLASGSGG
Trigger: GCCCCCTGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CAA 90 bp GAACTGGCAGAGACCCGCTTCCTGGTCAGGGTCTCCTGGCTGGGCTaGTCTGAAGCTGAAGGGCCCCTGGTTTGGACATGCCTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: ELAETRFLVRVSWLG*SEAEGPLVWTCLFP
Trigger: GGGAAAGAGGCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCCAGGAGACCCTGACCAGGAAGCGGGTCTCTGCCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS GCA 72 bp ACCTTGCCCAGGTCCATCAGCAGCTGCTTGATACAATaGTTGAGCTGCGGAAGCCTGGCCAGCGGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: TLPRSISSCLIQ*LSCGSLASGSG
Trigger: CCCTGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp GGCTTGTCTGAAGCTGAAGGGCCCCTGGTTTGGACATaGCTCTTTCCCGGGCTCTCTTCTGGCTCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: GLSEAEGPLVWT*LFPGLSSGSSD
Trigger: GTCACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
CDS GCA 72 bp GCGATCTGCTGCACCTTGCCCAGGTCCATCAGCAGCTaGTTGATACAATGCTTGAGCTGCGGAAGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: AICCTLPRSISS*LIQCLSCGSLA
Trigger: GGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp GGTGCCCAGTTTCATGTTGAGCAGCAGAGGGCGATCTaGTGCACCTTGCCCAGGTCCATCAGCAGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: GAQFHVEQQRAI*CTLPRSISSCL
Trigger: CAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGATCGCCCTCTGCTGCTCAACATGAAACTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp TGGATAGTTTTAAGCAACTCACGGCCCCACTCCGGCTaGGCCGCTCCAGGACCAACCGACAGAAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: WIVLSNSRPHSG*AAPGPTDRRTL
Trigger: CAGAGTCCTTCTGTCGGTTGGTCCTGGAGCGGCGCAGCCGGAGTGGGGCCGTGAGTTGCTTAAAACTATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS TCA 72 bp TGTGCCCCCATGAGTTTTGGGTGCCCAGTTTCATGTTaGGCAGCAGAGGGCGATCTGCTGCACCTTGCCCAG +
Preference number: 6 (lower is better)
Translates to: CAPMSFGCPVSC*AAEGDLLHLAQ
Trigger: CTGGGCAAGGTGCAGCAGATCGCCCTCTGCTGCTCAACATGAAACTGGGCACCCAAAACTCATGGGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CAA 72 bp ATCTGCTGCACCTTGCCCAGGTCCATCAGCAGCTGCTaGATACAATGCTTGAGCTGCGGAAGCCTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ICCTLPRSISSC*IQCLSCGSLAS
Trigger: GCTGGCCAGGCTTCCGCAGCTCAAGCATTGTATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CAA 90 bp CAAGGCTGGCACCACAGCGGCAGATCAGGATGCTCCCGGCTTCTGTaGAGAGGACAAAGAGGACATGGGCTTTGGAGTAACTGGCACCAT +
Preference number: 6 (lower is better)
Translates to: QGWHHSGRSGCSRLL*RGQRGHGLWSNWHH
Trigger: ATGGTGCCAGTTACTCCAAAGCCCATGTCCTCTTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCGCTGTGGTGCCAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473943.1
CDS TCA 72 bp ATGAAGCTGCGGGCTCATATGGACCCCTGGCTTGTGTaGGGACCCACACCTGGTAACAGCAAATGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: MKLRAHMDPWLV*GPTPGNSKCLG
Trigger: CCCAAGGCATTTGCTGTTACCAGGTGTGGGTCCTCACACAAGCCAGGGGTCCATATGAGCCCGCAGCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp AATAGGCGCGGGGCTTCTGGTAGCAATGCTCACTGGTaGTATAGGATTCCTCCACAGAACGCGGCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: NRRGASGSNAHW*YRIPPQNAAGA
Trigger: TGCCCCTGCCGCGTTCTGTGGAGGAATCCTATATCACCAGTGAGCATTGCTACCAGAAGCCCCGCGCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000473943.1
CDS GCA 72 bp TGTTTCCAAGGCTGGCACCACAGCGGCAGATCAGGATaGTCCCGGCTTTGCAAGATGCTCATCTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: CFQGWHHSGRSG*SRLCKMLILSC
Trigger: GCAGCTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCCTGATCTGCCGCTGTGGTGCCAGCCTTGGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp GCCCAGTTTCATGTTGAGCAGCAGAGGGCGATCTGCTaGACCTTGCCCAGGTCCATCAGCAGCTGCTTGATA +
Preference number: 6 (lower is better)
Translates to: AQFHVEQQRAIC*TLPRSISSCLI
Trigger: TATCAAGCAGCTGCTGATGGACCTGGGCAAGGTGCAGCAGATCGCCCTCTGCTGCTCAACATGAAACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CAA 72 bp TTGTGCCCCCATGAGTTTTGGGTGCCCAGTTTCATGTaGAGCAGCAGAGGGCGATCTGCTGCACCTTGCCCA +
Preference number: 6 (lower is better)
Translates to: LCPHEFWVPSFM*SSRGRSAAPCP
Trigger: TGGGCAAGGTGCAGCAGATCGCCCTCTGCTGCTCAACATGAAACTGGGCACCCAAAACTCATGGGGGCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp TTGAGCTGCAGGCCATGCAGAACCTCAATCACTCTCTaGACATCACCAAGAAGCTGGTGGGTGGCCACGATC +
Preference number: 6 (lower is better)
Translates to: LSCRPCRTSITL*TSPRSWWVATI
Trigger: GATCGTGGCCACCCACCAGCTTCTTGGTGATGTGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp TGTTTCCAAGGCTGGCACCACAGCGGCAGATCAGGATaGTCCCGGCTTCTGTTGAGAGGACAAAGAGGACAT +
Preference number: 6 (lower is better)
Translates to: CFQGWHHSGRSG*SRLLLRGQRGH
Trigger: ATGTCCTCTTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCGCTGTGGTGCCAGCCTTGGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473943.1
CDS CCA 72 bp GGGCTTCTCCACTGCCCCGTTCAAAGTTCTATAGCTTaGAGCTTCCTCCTTGCTCCTGGTGTCAGTGACAGG +
Preference number: 6 (lower is better)
Translates to: GLLHCPVQSSIA*SFLLAPGVSDR
Trigger: CCTGTCACTGACACCAGGAGCAAGGAGGAAGCTCCAAGCTATAGAACTTTGAACGGGGCAGTGGAGAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000473943.1
CDS TCA 72 bp GGATCCATCCCCAAAGGAGTGGCAAGTCAGTGCAGATaGGACCTGGCCAGCTTCCAAAGCAGACTTCAACTG +
Preference number: 6 (lower is better)
Translates to: GSIPKGVASQCR*DLASFQSRLQL
Trigger: CAGTTGAAGTCTGCTTTGGAAGCTGGCCAGGTCTCATCTGCACTGACTTGCCACTCCTTTGGGGATGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000485604.1
ENST00000495338.5
CDS TCA 72 bp ATGCCTTGGGTGGAGAAGGTTCCTGGGAGGTGTCACTaGTCTCCTCACTGCAGGGGCATTCAGGTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: MPWVEKVPGRCH*SPHCRGIQVWF
Trigger: AAACCAAACCTGAATGCCCCTGCAGTGAGGAGATCAGTGACACCTCCCAGGAACCTTCTCCACCCAAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp TTCACTTTCCCTTTGTGGTGTCCAGATTCTGGGCCATaGAGCTGCGGGCTCATATGGACCCCTGGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: FTFPLWCPDSGP*SCGLIWTPGLC
Trigger: ACACAAGCCAGGGGTCCATATGAGCCCGCAGCTTCATGGCCCAGAATCTGGACACCACAAAGGGAAAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp ACCACAGCGGCAGATCAGGATGCTCCCGGCTTCTGTTaGGAGGACAAAGAGGACATGGGCTTTGGAGTAACT +
Preference number: 6 (lower is better)
Translates to: TTAADQDAPGFC*EDKEDMGFGVT
Trigger: AGTTACTCCAAAGCCCATGTCCTCTTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCGCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473943.1
CDS GCA 72 bp GGATGCTCCCGGCTTTGCAAGATGCTCATCTTGAGCTaGAGGCCATGCAGAACCTCAATCACTCTCTGCACA +
Preference number: 6 (lower is better)
Translates to: GCSRLCKMLILS*RPCRTSITLCT
Trigger: TGTGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS GCA 72 bp GGGCTACCTCGGGAAGGAGGATCAAGTAACCCGGTTTaGCTCCCGGAAGGGGAACTGGATAGTTTTAAGCAA +
Preference number: 6 (lower is better)
Translates to: GLPREGGSSNPV*LPEGELDSFKQ
Trigger: TTGCTTAAAACTATCCAGTTCCCCTTCCGGGAGGCAAACCGGGTTACTTGATCCTCCTTCCCGAGGTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS TCA 72 bp GATCAGGATGCTCCCGGCTTTGCAAGATGCTCATCTTaGGCTGCAGGCCATGCAGAACCTCAATCACTCTCT +
Preference number: 6 (lower is better)
Translates to: DQDAPGFARCSS*AAGHAEPQSLS
Trigger: AGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCGGGAGCATCCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp AGCTGTGGAGAAATTAATCTGGTTGGGGGTTCAGGCTaGGAAGCCCTGAATAAGATCTCACGGCCCCACTCC +
Preference number: 6 (lower is better)
Translates to: SCGEINLVGGSG*EALNKISRPHS
Trigger: GGAGTGGGGCCGTGAGATCTTATTCAGGGCTTCTCAGCCTGAACCCCCAACCAGATTAATTTCTCCACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617560.1
CDS TCA 72 bp CCTGGCAGTGAACTCAACTCCACTTCCTCATTTCACTaGGAGAATGAAGCCCAACGGCAGTGGCTACTCAAG +
Preference number: 6 (lower is better)
Translates to: PGSELNSTSSFH*ENEAQRQWLLK
Trigger: CTTGAGTAGCCACTGCCGTTGGGCTTCATTCTCTCAGTGAAATGAGGAAGTGGAGTTGAGTTCACTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420233.1
CDS GCA 72 bp CGGCTTTGCAAGATGCTCATCTTGAGCTGCAGGCCATaGAGAACCTCAATCACTCTCTGCACATCACCAAGA +
Preference number: 6 (lower is better)
Translates to: RLCKMLILSCRP*RTSITLCTSPR
Trigger: TCTTGGTGATGTGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAGATGAGCATCTTGCAAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS CCA 72 bp AGCGGTCATCCCCATCAAGTTCCTCATCTGGGTTGGTaGTCACATCCACATCTTGGCCATACTCATCATCAC +
Preference number: 6 (lower is better)
Translates to: SGHPHQVPHLGW*SHPHLGHTHHH
Trigger: GTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGATGACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CCA 72 bp GAAGTCATAGCGGTCATCCCCATCAAGTTCCTCATCTaGGTTGGTGGTCACATCCACATCTTGGCCATACTC +
Preference number: 6 (lower is better)
Translates to: EVIAVIPIKFLI*VGGHIHILAIL
Trigger: GAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGATGACCGCTATGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CCA 72 bp CAATCACTCTCTGCACATCACCAAGAAGCTGGTGGGTaGCCACGATCTTCTTGGCATTCTGATGGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: QSLSAHHQEAGG*PRSSWHSDGSS
Trigger: ACTACTCCCATCAGAATGCCAAGAAGATCGTGGCCACCCACCAGCTTCTTGGTGATGTGCAGAGAGTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp TGGTATAGCTTCTTGGACCTAAAATCTCTCTCCTGCTaGGGCCTCATGCAGCTGCACACTCAAGTACTTCCC +
Preference number: 6 (lower is better)
Translates to: WYSFLDLKSLSC*GLMQLHTQVLP
Trigger: GGGAAGTACTTGAGTGTGCAGCTGCATGAGGCCTCAGCAGGAGAGAGATTTTAGGTCCAAGAAGCTATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617560.1
CDS CCA 72 bp GGCTCCCACTTCAAAGCTGATTCCTCGTCTGTTAGGTaGATGCTTTGTCATTTTCAGTCATCAACGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GSHFKADSSSVR*MLCHFQSSTGL
Trigger: CAGCCCCGTTGATGACTGAAAATGACAAAGCATCCACCTAACAGACGAGGAATCAGCTTTGAAGTGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000452270.5
ENST00000461405.1
ENST00000481202.5
CDS CCA 72 bp CATAGCGGTCATCCCCATCAAGTTCCTCATCTGGGTTaGTGGTCACATCCACATCTTGGCCATACTCATCAT +
Preference number: 6 (lower is better)
Translates to: HSGHPHQVPHLG*WSHPHLGHTHH
Trigger: ATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGATGACCGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CCA 72 bp AAAGTGTGGTCCCACAGCAGCAGCATGAGCAACTCCTaGGAACTCATTAGAAATGCAAGTTACCAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: KVWSHSSSMSNS*ELIRNASYQSH
Trigger: GTGGGACTGGTAACTTGCATTTCTAATGAGTTCCCAGGAGTTGCTCATGCTGCTGCTGTGGGACCACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480940.1
CDS CAA 90 bp ATCCCCATCAAGTTCCTCATCTGGGTTGGTGGTCACATCCACATCTaGGCCATACTCATCATCACTCCAGAGAAAGCTCTCAGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: IPIKFLIWVGGHIHI*AILIITPEKALRRG
Trigger: TCCTCTTCTGAGAGCTTTCTCTGGAGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTTGATGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS TCA 72 bp CAGTGCTTCTCAAAGTGTGGTCCCACAGCAGCAGCATaGGCAACTCCTGGGAACTCATTAGAAATGCAAGTT +
Preference number: 6 (lower is better)
Translates to: QCFSKCGPTAAA*ATPGNSLEMQV
Trigger: AACTTGCATTTCTAATGAGTTCCCAGGAGTTGCTCATGCTGCTGCTGTGGGACCACACTTTGAGAAGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480940.1
CDS CCA 72 bp AAATCTGATACAACCAAGTCAGGATCTAGGATCTCATaGGTCCCATTAGTGGACAGCCTGGAGGAACGTCTC +
Preference number: 6 (lower is better)
Translates to: KSDTTKSGSRIS*VPLVDSLEERL
Trigger: GAGACGTTCCTCCAGGCTGTCCACTAATGGGACCCATGAGATCCTAGATCCTGACTTGGTTGTATCAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000485604.1
ENST00000486408.5
CDS CCA 72 bp AGTTCCTCATCTGGGTTGGTGGTCACATCCACATCTTaGCCATACTCATCATCACTCCAGAGAAAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSSGLVVTSTS*PYSSSLQRKLS
Trigger: TGAGAGCTTTCTCTGGAGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CAA 72 bp AAGTTCCTCATCTGGGTTGGTGGTCACATCCACATCTaGGCCATACTCATCATCACTCCAGAGAAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: KFLIWVGGHIHI*AILIITPEKAL
Trigger: GAGAGCTTTCTCTGGAGTGATGATGAGTATGGCCAAGATGTGGATGTGACCACCAACCCAGATGAGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374012.8
ENST00000420233.1
CDS CAA 90 bp ACAAGAACATTCATAGGGCAAGGAAACGAGGATGCCAATCTGTCCTaGGATCTGTCATTTAGTAACAGCCCAAACGAAGCATGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: TRTFIGQGNEDANLS*DLSFSNSPNEACCL
Trigger: CAGGCAGCATGCTTCGTTTGGGCTGTTACTAAATGACAGATCCAAGGACAGATTGGCATCCTCGTTTCCTTGCCCTATGAATGTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420233.1
CDS TCA 72 bp TTCTCAATGGAGTCCATCCTGTGCGTAACTTCATCCTaGAGAGATTCCACATGGGTCAGCAGGTTAAACTGC +
Preference number: 6 (lower is better)
Translates to: FSMESILCVTSS*RDSTWVSRLNC
Trigger: GCAGTTTAACCTGCTGACCCATGTGGAATCTCTTCAGGATGAAGTTACGCACAGGATGGACTCCATTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374012.8
CDS TCA 72 bp TTAGTAACAGCCCAAACGAAGCATGCTGCCTGGCAGTaGACTCAACTCCACTTCCTCATTTCACTGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LVTAQTKHAAWQ*TQLHFLISLRE
Trigger: TTCTCTCAGTGAAATGAGGAAGTGGAGTTGAGTTCACTGCCAGGCAGCATGCTTCGTTTGGGCTGTTACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420233.1
CDS GCA 72 bp GATCTGTCATTTAGTAACAGCCCAAACGAAGCATGCTaGCTGGCAGTGAACTCAACTCCACTTCCTCATTTC +
Preference number: 6 (lower is better)
Translates to: DLSFSNSPNEAC*LAVNSTPLPHF
Trigger: GAAATGAGGAAGTGGAGTTGAGTTCACTGCCAGGCAGCATGCTTCGTTTGGGCTGTTACTAAATGACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420233.1
CDS TCA 72 bp CCTGACACTGGGATCCCTGCATCAAAGAGAAAAGACTaGCATTTCCTCACATCTTCCAAGAGTCAGGAAGTA +
Preference number: 6 (lower is better)
Translates to: PDTGIPASKRKD*HFLTSSKSQEV
Trigger: TACTTCCTGACTCTTGGAAGATGTGAGGAAATGTCAGTCTTTTCTCTTTGATGCAGGGATCCCAGTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461405.1
CDS GCA 72 bp AATGTCTTCTATGTGAGCTGGATACCTGTTTTTAAATaGGTGGGCTACCTCGGGAAGGAGGATCAAGTAACC +
Preference number: 6 (lower is better)
Translates to: NVFYVSWIPVFK*VGYLGKEDQVT
Trigger: GGTTACTTGATCCTCCTTCCCGAGGTAGCCCACGCATTTAAAAACAGGTATCCAGCTCACATAGAAGACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461122.5
CDS CAA 72 bp TTCATAGGGCAAGGAAACGAGGATGCCAATCTGTCCTaGGATCTGTCATTTAGTAACAGCCCAAACGAAGCA +
Preference number: 6 (lower is better)
Translates to: FIGQGNEDANLS*DLSFSNSPNEA
Trigger: TGCTTCGTTTGGGCTGTTACTAAATGACAGATCCAAGGACAGATTGGCATCCTCGTTTCCTTGCCCTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420233.1
CDS GCA 72 bp CCTTCTTCAGATTCCTTGGTACTAGACAACGTGTCTTaGAAAGGATCCGTATCAACCAAATCTGATACAACC +
Preference number: 6 (lower is better)
Translates to: PSSDSLVLDNVS*KGSVSTKSDTT
Trigger: GGTTGTATCAGATTTGGTTGATACGGATCCTTTGCAAGACACGTTGTCTAGTACCAAGGAATCTGAAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000485604.1
CDS CAA 90 bp TGCAACAGTTTGGCTTTGCGGAAAAATTTTAAACAGTCCACAACTTaGCATCTAAACTTATGGTCTAGGTCGACAGCTGGTGCATTAGAT +
Preference number: 6 (lower is better)
Translates to: CNSLALRKNFKQSTT*HLNLWSRSTAGALD
Trigger: ATCTAATGCACCAGCTGTCGACCTAGACCATAAGTTTAGATGCAAAGTTGTGGACTGTTTAAAATTTTTCCGCAAAGCCAAACTGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000495338.5
CDS TCA 72 bp CTTCTTCTCAGTTCCAATGTTATTGGTTGCAAAGTTTaGGAGTTTGAATCCACAGCAGTAGGAGCTATGGAA +
Preference number: 6 (lower is better)
Translates to: LLLSSNVIGCKV*EFESTAVGAME
Trigger: TTCCATAGCTCCTACTGCTGTGGATTCAAACTCTCAAACTTTGCAACCAATAACATTGGAACTGAGAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000481202.5
ENST00000486408.5
CDS CCA 72 bp CAGAACAGATTAACTTTCCTTCTTTATCAGGCTGCTTaGGTCGCTTTTCTGTCTTTAAGGGTTTATCTTCTT +
Preference number: 6 (lower is better)
Translates to: QNRLTFLLYQAA*VAFLSLRVYLL
Trigger: AAGAAGATAAACCCTTAAAGACAGAAAAGCGACCCAAGCAGCCTGATAAAGAAGGAAAGTTAATCTGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000449988.1
ENST00000461122.5
ENST00000480940.1
ENST00000481202.5
ENST00000486408.5
ENST00000496305.5
CDS CAA 72 bp TCAGAACAGATTAACTTTCCTTCTTTATCAGGCTGCTaGGGTCGCTTTTCTGTCTTTAAGGGTTTATCTTCT +
Preference number: 6 (lower is better)
Translates to: SEQINFPSLSGC*GRFSVFKGLSS
Trigger: AGAAGATAAACCCTTAAAGACAGAAAAGCGACCCAAGCAGCCTGATAAAGAAGGAAAGTTAATCTGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339089.10
ENST00000374000.8
ENST00000374012.8
ENST00000449988.1
ENST00000461122.5
ENST00000480940.1
ENST00000481202.5
ENST00000486408.5
ENST00000496305.5
CDS TCA 72 bp CTTCTTCTCAGTTCCAATGTTATTGGTTGCAAAGTTTaGGAGTTTGAATCCACAGCTGATCTTTGGAAAAAG +
Preference number: 6 (lower is better)
Translates to: LLLSSNVIGCKV*EFESTADLWKK
Trigger: CTTTTTCCAAAGATCAGCTGTGGATTCAAACTCTCAAACTTTGCAACCAATAACATTGGAACTGAGAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495338.5