RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197724

Ensembl transcript IDs: ENST00000359246.9, ENST00000375376.8, ENST00000610682.1

Found 436 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTaGGGAGATGGCAGCCGGGAAGAGGCAAGGCCCTCCCTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: GHAGLALPAEGTDAC*GDGSREEARPSLVR
Trigger: CCTCACCAGGGAGGGCCTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 90 bp CCCCTGCCCTGCCAGTCCCAGGGCAGGGGTGCCTTGGCTGAGAAGTaGTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: PLPCQSQGRGALAEK*FSRVWPAGQDGPCH
Trigger: GTGGCAGGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGCACCCCTGCCCTGGGACTGGCAGGGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR TCA 90 bp CTTGTTGGGGAGATGGCAGCCGGGAAGAGGCAAGGCCCTCCCTGGTaGGGCAGCTCGGCACCCTCCTGGGAGGCAGATGTTTTCGCGGGG +
Preference number: 1 (lower is better)
Translates to: LVGEMAAGKRQGPPW*GSSAPSWEADVFAG
Trigger: CCCCGCGAAAACATCTGCCTCCCAGGAGGGTGCCGAGCTGCCTCACCAGGGAGGGCCTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 90 bp TGCTCCTGGGCATTCAGGCTGAACACCCACCATCCTGCTGCCACCTaGCAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGC +
Preference number: 1 (lower is better)
Translates to: CSWAFRLNTHHPAAT*QPESSGQTLPHPPS
Trigger: GCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTGTTCAGCCTGAATGCCCAGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 90 bp AGCCCCTCCGTGTCGATGGTGGACACACCATCCAGGTACGACCCATaGAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCG +
Preference number: 1 (lower is better)
Translates to: SPSVSMVDTPSRYDP*RRHHTLTRENREVP
Trigger: CGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGACACGGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 90 bp CCAGAAATGCTCCTGGGCATTCAGGCTGAACACCCACCATCCTGCTaGCACCTGCCAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCC +
Preference number: 1 (lower is better)
Translates to: PEMLLGIQAEHPPSC*HLPTRKLGADPSSP
Trigger: GGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 90 bp CCCCCAGAAATGCTCCTGGGCATTCAGGCTGAACACCCACCATCCTaGTGCCACCTGCCAACCAGAAAGCTCGGGGCAGACCCTTCCTCA +
Preference number: 1 (lower is better)
Translates to: PPEMLLGIQAEHPPS*CHLPTRKLGADPSS
Trigger: TGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR CCA 90 bp GGCTGCCAGCCTGTGGCCAGCTCTGACTCTGGGGCTGGTGAGCATTaGCTCACTCTGTCTTCCTTGAAGGACTCATGCTCTCAGCAGAGC +
Preference number: 1 (lower is better)
Translates to: GCQPVASSDSGAGEH*LTLSSLKDSCSQQS
Trigger: GCTCTGCTGAGAGCATGAGTCCTTCAAGGAAGACAGAGTGAGCCAATGCTCACCAGCCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 90 bp GGGGCTGGTGAGCATTGGCTCACTCTGTCTTCCTTGAAGGACTCATaGTCTCAGCAGAGCTGCAGAGGCCCTGCAATCACACCCACGCTC +
Preference number: 1 (lower is better)
Translates to: GAGEHWLTLSSLKDS*SQQSCRGPAITPTL
Trigger: GAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCATGAGTCCTTCAAGGAAGACAGAGTGAGCCAATGCTCACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR TCA 90 bp GCAGAGCTGCAGAGGCCCTGCAATCACACCCACGCTCAGGGGGCCTaGAGGCTGTCCTTAAAGTGGAATAAGCGGTCCTCAAACTTGCAG +
Preference number: 1 (lower is better)
Translates to: AELQRPCNHTHAQGA*RLSLKWNKRSSNLQ
Trigger: CTGCAAGTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCTTCAGGCCCCCTGAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCAAGGCCCTCCCTGGTaGGGCAGCTCGGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSQGPPW*GSSAPS
Trigger: GGAGGGTGCCGAGCTGCCTCACCAGGGAGGGCCTTG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGGGGCTCCGGGGGTCCTaGGCGGAGCAGAAGGATCCT +
Preference number: 2 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMGLRGS*AEQKDP
Trigger: AGGATCCTTCTGCTCCGCTCAGGACCCCCGGAGCCC...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGGGCTCCGGGGGTCCTaGGCGGAGCAGAAGGATCCT +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTGLRGS*AEQKDP
Trigger: AGGATCCTTCTGCTCCGCTCAGGACCCCCGGAGCCC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGGGGCTCCGGGGGTCCTaGGCGGAGCAGAAGGATCCT +
Preference number: 2 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLGLRGS*AEQKDP
Trigger: AGGATCCTTCTGCTCCGCTCAGGACCCCCGGAGCCC...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCAAGGCCCTCCCTGGTaGGGCAGCTCGGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGQGPPW*GSSAPS
Trigger: GGAGGGTGCCGAGCTGCCTCACCAGGGAGGGCCTTG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGCTCGCTCTGCCGGCTaGAGGGACAGACGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSARSAG*RDRRLL
Trigger: CAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCGCTTGTTGGGGAGATaGCAGCCGGGAAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSRLLGR*QPGRGK
Trigger: CTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGGGACAGACGCTTGTTaGGGAGATGGCAGCCGGGAA +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSGTDAC*GDGSRE
Trigger: TTCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGAGGCTGCCAGCCTGTaGCCAGCTCTGACTCTGGGG +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPEAASL*PALTLG
Trigger: CCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCCTC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGAACACCCACCATCCTaGTGCCACCTGCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSEHPPS*CHLPTR
Trigger: TCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTGTTC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCACGCTCAGGGGGCCTaGAGGCTGTCCTTAAAGTGG +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTHAQGA*RLSLKW
Trigger: CCACTTTAAGGACAGCCTTCAGGCCCCCTGAGCGTG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCACGCTCAGGGGGCCTaGAGGCTGTCCTTAAAGTGG +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPHAQGA*RLSLKW
Trigger: CCACTTTAAGGACAGCCTTCAGGCCCCCTGAGCGTG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCACGCTCAGGGGGCCTaGAGGCTGTCCTTAAAGTGG +
Preference number: 2 (lower is better)
Translates to: RPMQATPHADTGEQRSADHAQGA*RLSLKW
Trigger: CCACTTTAAGGACAGCCTTCAGGCCCCCTGAGCGTG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCCTGGGCATTCAGGCTaGACACCCACCATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPPGHSG*TPTILL
Trigger: CAGCAGGATGGTGGGTGTTCAGCCTGAATGCCCAGG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACACCCCAAGATGTGGCTaGGCCCTTGCCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: RPMQATPHADTGEQRSADTPRCG*ALALSW
Trigger: CCAGGAAAGGGCAAGGGCTCAGCCACATCTTGGGGT...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGAGCTGCAGAGGCCCTaGAATCACACCCACGCTCAG +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTELQRP*NHTHAQ
Trigger: CTGAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGAGCTCGGCACCCTCCTaGGAGGCAGATGTTTTCGCG +
Preference number: 2 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLSSAPS*EADVFA
Trigger: CGCGAAAACATCTGCCTCCCAGGAGGGTGCCGAGCT...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCGCTTGTTGGGGAGATaGCAGCCGGGAAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLRLLGR*QPGRGK
Trigger: CTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCGCTTGTTGGGGAGATaGCAGCCGGGAAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTRLLGR*QPGRGK
Trigger: CTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGGGACAGACGCTTGTTaGGGAGATGGCAGCCGGGAA +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPGTDAC*GDGSRE
Trigger: TTCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGAGGCTGCCAGCCTGTaGCCAGCTCTGACTCTGGGG +
Preference number: 2 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLEAASL*PALTLG
Trigger: CCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCCTC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCCGCCGAGCACTGTCTaGACTTGGCTGAGAATCACT +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSPPSTV*TWLRIT
Trigger: AGTGATTCTCAGCCAAGTCCAGACAGTGCTCGGCGG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCACGGTCCCTGCCACATaGCTTAGCCTGGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGTVPAT*LSLGLP
Trigger: TGGGAGGCCCAGGCTAAGCCATGTGGCAGGGACCGT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCGTCCATTTTCAAATTaGGGGGCCACGCTGGGCTCG +
Preference number: 2 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLRPFSN*GATLGS
Trigger: CGAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCACCCCAAGATGTGGCTaGGCCCTTGCCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGTPRCG*ALALSW
Trigger: CCAGGAAAGGGCAAGGGCTCAGCCACATCTTGGGGT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCATCCTGCTGCCACCTaGCAACCAGAAAGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLHPAAT*QPESSG
Trigger: CCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCTGCCAGTCTTAGCTaGCCCCCAGAAATGCTCCTG +
Preference number: 2 (lower is better)
Translates to: RPMQATPHADTGEQRSADAASLS*PPEMLL
Trigger: CAGGAGCATTTCTGGGGGGCAGCTAAGACTGGCAGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGCTGCCAGTCTTAGCTaGCCCCCAGAAATGCTCCTG +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPAASLS*PPEMLL
Trigger: CAGGAGCATTTCTGGGGGGCAGCTAAGACTGGCAGC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCCACAATGGCTCCCCTaGCCGCTAACACACCAACCC +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGPQWLP*PLTHQP
Trigger: GGGTTGGTGTGTTAGCGGGCAGGGGAGCCATTGTGG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCCACAATGGCTCCCCTaGCCGCTAACACACCAACCC +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLPQWLP*PLTHQP
Trigger: GGGTTGGTGTGTTAGCGGGCAGGGGAGCCATTGTGG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGGGACAGACGCTTGTTaGGGAGATGGCAGCCGGGAA +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLGTDAC*GDGSRE
Trigger: TTCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGCAGGGCCGCTTTTCTaGGACAGATCACTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: RENREVPTVSPRAAWPLSAGPLF*DRSLLA
Trigger: TGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCTGC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCACGCTGGGCTCGCTCTaGCGGCTGAAGGGACAGACG +
Preference number: 2 (lower is better)
Translates to: VGVDKASTKLPLPVDKNITLGSL*RLKGQT
Trigger: CGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGT...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACTGCTCTCAGCAGAGCTaGAGAGGCCCTGCAATCACA +
Preference number: 2 (lower is better)
Translates to: RPMQATPHADTGEQRSADCSQQS*RGPAIT
Trigger: TGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCA...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCATCCTGCTGCCACCTaGCAACCAGAAAGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLHPAAT*QPESSG
Trigger: CCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCACCCACCATCCTGCTaGCACCTGCCAACCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLHPPSC*HLPTRK
Trigger: CTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGGGGCTGGTGAGCATTaGCTCACTCTGTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTGAGEH*LTLSSL
Trigger: CAAGGAAGACAGAGTGAGCCAATGCTCACCAGCCCC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCCCCAGAAATGCTCCTaGGCATTCAGGCTGAACACC +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPPQKCS*AFRLNT
Trigger: GGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGGGG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGTGCTTCTCCAGAGTGTaGCCAGCAGGGCAAGACGGT +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLCFSRV*PAGQDG
Trigger: ACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCA...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCTGCTCTCAGCAGAGCTaGAGAGGCCCTGCAATCACA +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGCSQQS*RGPAIT
Trigger: TGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCA...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGCAGGGCCGCTTTTCTaGGACAGATCACTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTAGPLF*DRSLLA
Trigger: TGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCTGC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGGGGCTGGTGAGCATTaGCTCACTCTGTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLGAGEH*LTLSSL
Trigger: CAAGGAAGACAGAGTGAGCCAATGCTCACCAGCCCC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCCGCCGAGCACTGTCTaGACTTGGCTGAGAATCACT +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLPPSTV*TWLRIT
Trigger: AGTGATTCTCAGCCAAGTCCAGACAGTGCTCGGCGG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCCCCAGAAATGCTCCTaGGCATTCAGGCTGAACACC +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGPQKCS*AFRLNT
Trigger: GGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGGGG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCCCCAGAAATGCTCCTaGGCATTCAGGCTGAACACC +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLPQKCS*AFRLNT
Trigger: GGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGGGG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCACGGTCCCTGCCACATaGCTTAGCCTGGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: VGVDKASTKLPLPVDKNITVPAT*LSLGLP
Trigger: TGGGAGGCCCAGGCTAAGCCATGTGGCAGGGACCGT...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCTGTCTGGACTTGGCTaGGAATCACTCAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPLSGLG*ESLRKR
Trigger: TCTCTTCCTGAGTGATTCTCAGCCAAGTCCAGACAG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGGCGACACCACACGCTaGCACGGGAGAACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIGDTTR*HGRTEK
Trigger: CTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTGCTCTCAGCAGAGCTaGAGAGGCCCTGCAATCACA +
Preference number: 2 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLCSQQS*RGPAIT
Trigger: TGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCA...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGCCTTGGCTGAGAAGTaGTTCTCCAGAGTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLALAEK*FSRVWP
Trigger: TGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCTCCTTGAAGGACTCATaGTCTCAGCAGAGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: TPHADTGEQRSADRKSSGSLKDS*SQQSCR
Trigger: TCTGCAGCTCTGCTGAGAGCATGAGTCCTTCAAGGA...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGCCTTGGCTGAGAAGTaGTTCTCCAGAGTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIALAEK*FSRVWP
Trigger: TGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACAGGCTGTCCTTAAAGTaGAATAAGCGGTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: RPMQATPHADTGEQRSADRLSLK*NKRSSN
Trigger: GTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCT...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCAGGCTGTCCTTAAAGTaGAATAAGCGGTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPRLSLK*NKRSSN
Trigger: GTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGAGCACTGTCTGGACTTaGCTGAGAATCACTCAGGAA +
Preference number: 2 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLSTVWT*LRITQE
Trigger: TTCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCT...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCATAAACATCCCACTTaGTCCTCCTCTTTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTHKHPT*SSSFCV
Trigger: AACACAGAAAGAGGAGGAGCAAGTGGGATGTTTATG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTCACTCTTAGCAACTTaGGAAAAGACGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTSLLAT*EKTSIF
Trigger: GAAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGA...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCATAAACATCCCACTTaGTCCTCCTCTTTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLHKHPT*SSSFCV
Trigger: AACACAGAAAGAGGAGGAGCAAGTGGGATGTTTATG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGCTCGCTCTGCCGGCTaGAGGGACAGACGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVARSAG*RDRRLL
Trigger: CAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGCCCTTGCCCTTTCCTaGGGACCCCACAATGGCTCC +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVALALS*GPHNGS
Trigger: GGAGCCATTGTGGGGTCCCCAGGAAAGGGCAAGGGC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTCACTCTTAGCAACTTaGGAAAAGACGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: VGVDKASTKLPLPVDKNISLLAT*EKTSIF
Trigger: GAAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCCACAATGGCTCCCCTaGCCGCTAACACACCAACCC +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVPQWLP*PLTHQP
Trigger: GGGTTGGTGTGTTAGCGGGCAGGGGAGCCATTGTGG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAGCTCGGCACCCTCCTaGGAGGCAGATGTTTTCGCG +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVSSAPS*EADVFA
Trigger: CGCGAAAACATCTGCCTCCCAGGAGGGTGCCGAGCT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCACCCACCATCCTGCTaGCACCTGCCAACCAGAAAG +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVHPPSC*HLPTRK
Trigger: CTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTGCTTCTCCAGAGTGTaGCCAGCAGGGCAAGACGGT +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVCFSRV*PAGQDG
Trigger: ACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAGCGGTCCTCAAACTTaGAGGGCCGCTTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVSGPQT*RAAFLG
Trigger: TCCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGGCGACACCACACGCTaGCACGGGAGAACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: TLINYSITKHGNTSQGASGDTTR*HGRTEK
Trigger: CTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGAGCTGCAGAGGCCCTaGAATCACACCCACGCTCAG +
Preference number: 2 (lower is better)
Translates to: TLINYSITKHGNTSQGASELQRP*NHTHAQ
Trigger: CTGAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTAGCGGTCCTCAAACTTaGAGGGCCGCTTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: TLINYSITKHGNTSQGASSGPQT*RAAFLG
Trigger: TCCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAGCACTGTCTGGACTTaGCTGAGAATCACTCAGGAA +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVSTVWT*LRITQE
Trigger: TTCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAAATACAGGATTGCCTaGGAAACAAATCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVKYRIA*ETNPAP
Trigger: AGGGGCTGGATTTGTTTCTCAGGCAATCCTGTATTT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAGGCTGTCCTTAAAGTaGAATAAGCGGTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: VLFASVKTECKAAQTSLVRLSLK*NKRSSN
Trigger: GTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCATAAACATCCCACTTaGTCCTCCTCTTTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: TLINYSITKHGNTSQGASHKHPT*SSSFCV
Trigger: AACACAGAAAGAGGAGGAGCAAGTGGGATGTTTATG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR CCA 72 bp GGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTaGGGAGATGGCAGCCGGGAAGAGGCAAGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: GLALPAEGTDAC*GDGSREEARPS
Trigger: GGAGGGCCTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR TCA 72 bp CAAATTGAGGGGCCACGCTGGGCTCGCTCTGCCGGCTaGAGGGACAGACGCTTGTTGGGGAGATGGCAGCCG +
Preference number: 3 (lower is better)
Translates to: QIEGPRWARSAG*RDRRLLGRWQP
Trigger: CGGCTGCCATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGCCCCTCAATTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCAGGGACAGACGCTTGTaGGGGAGATGGCAGCCGGGA +
Preference number: 3 (lower is better)
Translates to: TPHADTGEQRSADRKSSGRDRRL*GRWQPG
Trigger: TCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCAAGCGGTCCTCAAACTaGCAGGGCCGCTTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPKRSSN*QGRFSG
Trigger: CCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCTT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR CCA 72 bp TCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTaGACTTGGCTGAGAATCACTCAGGAAGAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SGQTLPHPPSTV*TWLRITQEEKG
Trigger: CCCCTTCTCTTCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACACGTCCATTTTCAAATaGAGGGGCCACGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: RPMQATPHADTGEQRSADTSIFK*RGHAGL
Trigger: GAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACGT...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTACGTCCATTTTCAAATaGAGGGGCCACGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTTSIFK*RGHAGL
Trigger: GAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACGT...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCAAGCGGTCCTCAAACTaGCAGGGCCGCTTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: TPHADTGEQRSADRKSSGKRSSN*QGRFSG
Trigger: CCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCTT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR GCA 72 bp GTGTCGATGGTGGACACACCATCCAGGTACGACCCATaGAGGCGACACCACACGCTGACACGGGAGAACAGA +
Preference number: 3 (lower is better)
Translates to: VSMVDTPSRYDP*RRHHTLTRENR
Trigger: TCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCATCACTCTTAGCAACTaGAGAAAAGACGTCCATTTT +
Preference number: 3 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPITLSN*RKDVHF
Trigger: AAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGAT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACATCACTCTTAGCAACTaGAGAAAAGACGTCCATTTT +
Preference number: 3 (lower is better)
Translates to: RPMQATPHADTGEQRSADITLSN*RKDVHF
Trigger: AAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGAT...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCATCACTCTTAGCAACTaGAGAAAAGACGTCCATTTT +
Preference number: 3 (lower is better)
Translates to: TPHADTGEQRSADRKSSGITLSN*RKDVHF
Trigger: AAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGAT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCTGCACAGACATCACTaGTTTTTCAGGCAATACCTT +
Preference number: 3 (lower is better)
Translates to: VGVDKASTKLPLPVDKNILHRHH*FFRQYL
Trigger: AAGGTATTGCCTGAAAAACAAGTGATGTCTGTGCAG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAAGCGGTCCTCAAACTaGCAGGGCCGCTTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: VLFASVKTECKAAQTSLVKRSSN*QGRFSG
Trigger: CCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCTT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTAGGGACAGACGCTTGTaGGGGAGATGGCAGCCGGGA +
Preference number: 3 (lower is better)
Translates to: TLINYSITKHGNTSQGASRDRRL*GRWQPG
Trigger: TCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGAGCACTGTCTGGACTaGGCTGAGAATCACTCAGGA +
Preference number: 3 (lower is better)
Translates to: VLFASVKTECKAAQTSLVEHCLD*AENHSG
Trigger: TCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCTC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTACGTCCATTTTCAAATaGAGGGGCCACGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: TLINYSITKHGNTSQGASTSIFK*RGHAGL
Trigger: GAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACGT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
3UTR-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCTGCACAGACATCACTaGTTTTTCAGGCAATACCTT +
Preference number: 3 (lower is better)
Translates to: TLINYSITKHGNTSQGASLHRHH*FFRQYL
Trigger: AAGGTATTGCCTGAAAAACAAGTGATGTCTGTGCAG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGCTCAGGCGGGGGCTCTaGCGAGCTGCCCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMLRRGL*RAALLR
Trigger: TCGCAGGAGGGCAGCTCGCCAGAGCCCCCGCCTGAG...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGGGGCTCTGGCGAGCTaGCCTCCTGCGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADGALAS*PPARPG
Trigger: GCCAGGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCGAGGCCTGGCTGCTaGCCGTGCTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADARPGC*PCWWRP
Trigger: CGGCCTCCACCAGCACGGCCAGCAGCCAGGCCTCGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGCGAGGCCTGGCTGCTaGCCGTGCTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPARPGC*PCWWRP
Trigger: CGGCCTCCACCAGCACGGCCAGCAGCCAGGCCTCGC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCCAGGGGCCATGGGCTaGGAGGTGCGGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPPGAMG*EVRPAW
Trigger: CCAGGCTGGCCGCACCTCCCAGCCCATGGCCCCTGG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCAGCCTGGGCCCCGGTaGAGGTGCCAGCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPQPGPR*RCQRLC
Trigger: ACACAGCCGCTGGCACCTTCACCGGGGCCCAGGCTG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCAGGGCCGCCTCTGTGTaGGAAAGACCCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSRAASV*ERPQGP
Trigger: TGGCCCCTGGGGTCTTTCTCACACAGAGGCGGCCCT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCAAGGCCCTCCCTGGTaGGGCAGCTCGGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLQGPPW*GSSAPS
Trigger: GGAGGGTGCCGAGCTGCCTCACCAGGGAGGGCCTTG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCCTGCGAGGCCTGGCTaGTGGCCGTGCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPPARPG*WPCWWR
Trigger: CCTCCACCAGCACGGCCAGCAGCCAGGCCTCGCAGG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCCTGCGAGGCCTGGCTaGTGGCCGTGCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLPARPG*WPCWWR
Trigger: CCTCCACCAGCACGGCCAGCAGCCAGGCCTCGCAGG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGGGGCTCTGGCGAGCTaGCCTCCTGCGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGGALAS*PPARPG
Trigger: GCCAGGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCCGGGGGCTGGCTGCTaGGGTTGTACTCCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADPGAGC*GCTPAR
Trigger: GCGCGCTGGAGTACAACCCCAGCAGCCAGCCCCCGG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGTGCTGGCCGTGCTGGTaGAGGCCGGGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLCWPCW*RPGWWR
Trigger: CCTCCACCACCCCGGCCTCCACCAGCACGGCCAGCA...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGGCTGCTGGCCGTGCTaGTGGAGGCCGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLGCWPC*WRPGWW
Trigger: CCACCACCCCGGCCTCCACCAGCACGGCCAGCAGCC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCCCTCCTGCGAGGCCTaGCTGCTGGCCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPPSCEA*LLAVLV
Trigger: CACCAGCACGGCCAGCAGCCAGGCCTCGCAGGAGGG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCAGCCTGGGCCCCGGTaGAGGTGCCAGCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLQPGPR*RCQRLC
Trigger: ACACAGCCGCTGGCACCTTCACCGGGGCCCAGGCTG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGGCTCGCTCTGCCGGCTaGAGGGACAGACGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMARSAG*RDRRLL
Trigger: CAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGC...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGCAGCAGGTCCAAGATaGCAGCTGCCGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSAAGPR*QLPSSH
Trigger: GTGGGAGCTCGGCAGCTGGCATCTTGGACCTGCTGC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCTGGGACAACTTAGCTaGAGCAGCCGCCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSLGQLS*SSRQPG
Trigger: ACCGGGCTGGCGGCTGCTGCAGCTAAGTTGTCCCAG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGGTCCGCCAGGCTGCTaGTATGCGACTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADGPPGC*YATQAG
Trigger: CCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGGCCAGCTCCCCACGTaGTCTGCAGGCAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADGQLPT*SAGRSR
Trigger: CCGACTCCTGCCTGCAGACCACGTGGGGAGCTGGCC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCAGGCCTGTCCTGTCTTaGCACCGATGGGCCGACCCT +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSRPVLS*HRWADP
Trigger: AGGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCTGCTGGCCGTGCTGGTaGAGGCCGGGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGCWPCW*RPGWWR
Trigger: CCTCCACCACCCCGGCCTCCACCAGCACGGCCAGCA...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCCCTCCTGCGAGGCCTaGCTGCTGGCCGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGPSCEA*LLAVLV
Trigger: CACCAGCACGGCCAGCAGCCAGGCCTCGCAGGAGGG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCAGGGGCCATGGGCTaGGAGGTGCGGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPGAMG*EVRPAW
Trigger: CCAGGCTGGCCGCACCTCCCAGCCCATGGCCCCTGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCACGGTCCCTGCCACATaGCTTAGCCTGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSTVPAT*LSLGLP
Trigger: TGGGAGGCCCAGGCTAAGCCATGTGGCAGGGACCGT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGGCGACACCACACGCTaGCACGGGAGAACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSGDTTR*HGRTEK
Trigger: CTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGGGCGACACCACACGCTaGCACGGGAGAACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMGDTTR*HGRTEK
Trigger: CTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCC...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCCAGGCTGCTGCTATaGGACTCAGGCGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADARLLL*DSGGGS
Trigger: AGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGGTCCGCCAGGCTGCTaGTATGCGACTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLGPPGC*YATQAG
Trigger: CCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGACGCTGGGCTCGCTCTaGCGGCTGAAGGGACAGACG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLTLGSL*RLKGQT
Trigger: CGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGT...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACACGCTGGGCTCGCTCTaGCGGCTGAAGGGACAGACG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADTLGSL*RLKGQT
Trigger: CGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGT...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTCCAGGTACGACCCATaGAGGCGACACCACACGCTG +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSSRYDP*RRHHTL
Trigger: CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTCGGGCCCTAGGGACTaGGTCCCTCCAAACAGGACA +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSSGPRD*VPPNRT
Trigger: TGTCCTGTTTGGAGGGACGCAGTCCCTAGGGCCCGA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCCAACACAGCTGCCGTaGAACCAGTCCTTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSPTQLP*NQSLQA
Trigger: CGCCTGCAAGGACTGGTTCCACGGCAGCTGTGTTGG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGCCACGTCTTCAGCACTaGGAAAGGTCCGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMPRLQH*ERSGSA
Trigger: TGCGGAGCCGGACCTTTCCCAGTGCTGAAGACGTGG...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCTGGCGTGGTGGAGGTaGAGGTGGTGCCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLLAWWR*RWCRQR
Trigger: TCTCTGCCGGCACCACCTCCACCTCCACCACGCCAG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGCGGCTGTGTACTCATaGTCCGCCAGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSAAVYS*SARLLL
Trigger: TAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGGAGGCTGCCAGCCTGTaGCCAGCTCTGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLEAASL*PALTLG
Trigger: CCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCCTC...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCGTCCATTTTCAAATTaGGGGGCCACGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSRPFSN*GATLGS
Trigger: CGAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACTGTTCTTGGCAGCCTTaGCGTCAGGCGCTTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADCSWQP*RQALAP
Trigger: CGGGGCAAGCGCCTGACGTCAAGGCTGCCAAGAACA...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCGATGGGCCGACCCTTaGTGTTGGGCTGTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLRWADP*CWAVGS
Trigger: GCTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGGGGCTCTGGCGAGCTaGCCTCCTGCGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIGALAS*PPARPG
Trigger: GCCAGGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGCCAGGCTGCTGCTATaGGACTCAGGCGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLARLLL*DSGGGS
Trigger: AGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGCCAGGCTGCTGCTATaGGACTCAGGCGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGARLLL*DSGGGS
Trigger: AGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGTTGTTTGGAGACGATaGGGAGGGCCGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSVVWRR*GGPPLC
Trigger: ACACAGAGGCGGCCCTCCGCATCGTCTCCAAACAAC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCATTTTCCCAAGCCTCTaGTTGGCGGTCGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSIFPSL*LAVAMP
Trigger: GGGCATGGCGACCGCCAAGCAGAGGCTTGGGAAAAT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCCGACCCTTGCTGTTaGGCTGTAGGGAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADADPCC*AVGSVV
Trigger: GACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGCCGACCCTTGCTGTTaGGCTGTAGGGAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPADPCC*AVGSVV
Trigger: GACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGCCGACCCTTGCTGTTaGGCTGTAGGGAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTADPCC*AVGSVV
Trigger: GACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCAGGCCTGTCCTGTCTTaGCACCGATGGGCCGACCCT +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPRPVLS*HRWADP
Trigger: AGGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCCAGCCCGGTCTCGATaGAAGCCACCCGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADPARSR*KPPVYP
Trigger: AGGGTACACGGGTGGCTTCCATCGAGACCGGGCTGG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGTGGTGCCGGCAGAGATaGAGGTGGAGGTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLWCRQR*RWRWKG
Trigger: CCCCTTCCACCTCCACCTCCATCTCTGCCGGCACCA...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCTGGCGTGGTGGAGGTaGAGGTGGTGCCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGLAWWR*RWCRQR
Trigger: TCTCTGCCGGCACCACCTCCACCTCCACCACGCCAG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGGCTGCTGGCCGTGCTaGTGGAGGCCGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIGCWPC*WRPGWW
Trigger: CCACCACCCCGGCCTCCACCAGCACGGCCAGCAGCC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGAGGCTGCCAGCCTGTaGCCAGCTCTGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGEAASL*PALTLG
Trigger: CCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCCTC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGGCCCTTGCCCTTTCCTaGGGACCCCACAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLALALS*GPHNGS
Trigger: GGAGCCATTGTGGGGTCCCCAGGAAAGGGCAAGGGC...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGCCCTTGCCCTTTCCTaGGGACCCCACAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPALALS*GPHNGS
Trigger: GGAGCCATTGTGGGGTCCCCAGGAAAGGGCAAGGGC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTACGGTCCCTGCCACATaGCTTAGCCTGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTTVPAT*LSLGLP
Trigger: TGGGAGGCCCAGGCTAAGCCATGTGGCAGGGACCGT...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTGCTTCTCCAGAGTGTaGCCAGCAGGGCAAGACGGT +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSCFSRV*PAGQDG
Trigger: ACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCAGGGCAGGGGTGCCTTaGCTGAGAAGTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSRAGVP*LRSASP
Trigger: TGGAGAAGCACTTCTCAGCCAAGGCACCCCTGCCCT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCCTCCGTGTCGATGGTaGACACACCATCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSPPCRW*THHPGT
Trigger: CGTACCTGGATGGTGTGTCCACCATCGACACGGAGG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCATTCTGCACGGGCTTaGCGTCAGGCGCTTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLHSARA*RQALAP
Trigger: CGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGCTCGCTCTGCCGGCTaGAGGGACAGACGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGARSAG*RDRRLL
Trigger: CAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCACCCCAAGATGTGGCTaGGCCCTTGCCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPTPRCG*ALALSW
Trigger: CCAGGAAAGGGCAAGGGCTCAGCCACATCTTGGGGT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCTGGGACAACTTAGCTaGAGCAGCCGCCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLLGQLS*SSRQPG
Trigger: ACCGGGCTGGCGGCTGCTGCAGCTAAGTTGTCCCAG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCTGGGACAACTTAGCTaGAGCAGCCGCCAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGLGQLS*SSRQPG
Trigger: ACCGGGCTGGCGGCTGCTGCAGCTAAGTTGTCCCAG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCACGCTGGGCTCGCTCTaGCGGCTGAAGGGACAGACG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLTLGSL*RLKGQT
Trigger: CGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGT...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGGAGCTGCAGAGGCCCTaGAATCACACCCACGCTCAG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLELQRP*NHTHAQ
Trigger: CTGAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTC...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCATCCTGCTGCCACCTaGCAACCAGAAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTHPAAT*QPESSG
Trigger: CCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCATCCTGCTGCCACCTaGCAACCAGAAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPHPAAT*QPESSG
Trigger: CCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGAGGCCTCCACCAAGCTaGCTCTCCCAGTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMRPPPS*LSQWTK
Trigger: TTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCT...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCTCGGGCCCTAGGGACTaGGTCCCTCCAAACAGGACA +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPSGPRD*VPPNRT
Trigger: TGTCCTGTTTGGAGGGACGCAGTCCCTAGGGCCCGA...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCCAACACAGCTGCCGTaGAACCAGTCCTTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTPTQLP*NQSLQA
Trigger: CGCCTGCAAGGACTGGTTCCACGGCAGCTGTGTTGG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCAGGTTGGGGATGGTaGGTGAGGCTGACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPGWGW*VRLTPG
Trigger: CCCGGGAGTCAGCCTCACCCACCATCCCCAACCTGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCTGCCGAGTCCAGCTTTaGCTTCGTGACAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPCRVQL*LRDRRG
Trigger: CCCACGCCTGTCACGAAGCCAAAGCTGGACTCGGCA...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCTGTCTTGGCACCGATaGGCCGACCCTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLLSWHR*ADPCCW
Trigger: CCAACAGCAAGGGTCGGCCCATCGGTGCCAAGACAG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCTGTCTTGGCACCGATaGGCCGACCCTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADLSWHR*ADPCCW
Trigger: CCAACAGCAAGGGTCGGCCCATCGGTGCCAAGACAG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCAGGCCTGTCCTGTCTTaGCACCGATGGGCCGACCCT +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGRPVLS*HRWADP
Trigger: AGGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCCAGCCCGGTCTCGATaGAAGCCACCCGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLPARSR*KPPVYP
Trigger: AGGGTACACGGGTGGCTTCCATCGAGACCGGGCTGG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTGCTGGCCGTGCTGGTaGAGGCCGGGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNICWPCW*RPGWWR
Trigger: CCTCCACCACCCCGGCCTCCACCAGCACGGCCAGCA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCGGCTGTGTACTCATaGTCCGCCAGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADAAVYS*SARLLL
Trigger: TAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCAGCTCGGCACCCTCCTaGGAGGCAGATGTTTTCGCG +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPSSAPS*EADVFA
Trigger: CGCGAAAACATCTGCCTCCCAGGAGGGTGCCGAGCT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGCCCCAGAAATGCTCCTaGGCATTCAGGCTGAACACC +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMPQKCS*AFRLNT
Trigger: GGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGGGG...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGCCCTTGCCCTTTCCTaGGGACCCCACAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGALALS*GPHNGS
Trigger: GGAGCCATTGTGGGGTCCCCAGGAAAGGGCAAGGGC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCCCCTCCGTGTCGATaGTGGACACACCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADAPPCR*WTHHPG
Trigger: ACCTGGATGGTGTGTCCACCATCGACACGGAGGGGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCAGGACAAGTGGGAGTaGATAAGGCCTCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSQDKWE*IRPPPS
Trigger: GCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGAGGTCTTCTCCCCCTTaGGCACGTGGTACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLRSSPP*ARGTRQ
Trigger: CTGCCTGGTACCACGTGCTCAAGGGGGAGAAGACCT...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGGCGTAGATCCAGCCTaGGGGGATGAAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLGVDPA*GDEEGL
Trigger: CAGACCCTCTTCATCCCCTCAGGCTGGATCTACGCC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGGAAACTCGTCGATCTTaGGCTCACCGTCATCCGACA +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMETRRS*AHRHPT
Trigger: TGTCGGATGACGGTGAGCTCAAGATCGACGAGTTTC...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGCTCGCTCTGCCGGCTaGAGGGACAGACGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLARSAG*RDRRLL
Trigger: CAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGACCCCAAGATGTGGCTaGGCCCTTGCCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLTPRCG*ALALSW
Trigger: CCAGGAAAGGGCAAGGGCTCAGCCACATCTTGGGGT...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTTGACGTCAGGCGCTTaGCCCGGGCCGTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLLTSGA*PGPCLC
Trigger: GCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAA...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTACCTCCTCACTGGCCTaGAGCAGGTCCAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTTSSLA*SRSKMP
Trigger: TGGCATCTTGGACCTGCTGCAGGCCAGTGAGGAGGT...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGAGCTGCAGAGGCCCTaGAATCACACCCACGCTCAG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGELQRP*NHTHAQ
Trigger: CTGAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCACCCACCATCCTGCTaGCACCTGCCAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADHPPSC*HLPTRK
Trigger: CTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGAACACCCACCATCCTaGTGCCACCTGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADEHPPS*CHLPTR
Trigger: TCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTGTTC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGCTGCCAGTCTTAGCTaGCCCCCAGAAATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTAASLS*PPEMLL
Trigger: CAGGAGCATTTCTGGGGGGCAGCTAAGACTGGCAGC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCAGCCCGGTCTCGATaGAAGCCACCCGTGTACCCT +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPARSR*KPPVYP
Trigger: AGGGTACACGGGTGGCTTCCATCGAGACCGGGCTGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACAGCGGTGTTGTTGTTTaGAGACGATGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADSGVVV*RRCGGP
Trigger: CGGCCCTCCGCATCGTCTCCAAACAACAACACCGCT...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACTCCCAAGCCTCTGCTTaGCGGTCGCCATGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADSQASA*RSPCPF
Trigger: AAAAGGGCATGGCGACCGCCAAGCAGAGGCTTGGGA...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCTTGTTGGGGAGATaGCAGCCGGGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGRLLGR*QPGRGK
Trigger: CTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCTTCTCCAGAGTGTaGCCAGCAGGGCAAGACGGT +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTCFSRV*PAGQDG
Trigger: ACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCA...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGCCCCTCCGTGTCGATaGTGGACACACCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLAPPCR*WTHHPG
Trigger: ACCTGGATGGTGTGTCCACCATCGACACGGAGGGGC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCGTAGTCTGAGTCCTTaGAGCAGGCATCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPRSLSP*SRHPGG
Trigger: ACCACCTGGATGCCTGCTTCAAGGACTCAGACTACG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCAGGGCCGCCTCTGTGTaGGAAAGACCCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIRAASV*ERPQGP
Trigger: TGGCCCCTGGGGTCTTTCTCACACAGAGGCGGCCCT...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCGTCCATTTTCAAATTaGGGGGCCACGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLRPFSN*GATLGS
Trigger: CGAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGTCCATTTTCAAATTaGGGGGCCACGCTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGRPFSN*GATLGS
Trigger: CGAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCACGCTCAGGGGGCCTaGAGGCTGTCCTTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLHAQGA*RLSLKW
Trigger: CCACTTTAAGGACAGCCTTCAGGCCCCCTGAGCGTG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCTGGGCATTCAGGCTaGACACCCACCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPGHSG*TPTILL
Trigger: CAGCAGGATGGTGGGTGTTCAGCCTGAATGCCCAGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCACCCCAAGATGTGGCTaGGCCCTTGCCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLTPRCG*ALALSW
Trigger: CCAGGAAAGGGCAAGGGCTCAGCCACATCTTGGGGT...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCACTCTTTGTGGCCTTaGCCTTCTTGGGCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGHSLWP*PSWAAP
Trigger: TGGAGCCGCCCAAGAAGGGCAAGGCCACAAAGAGTG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGGTTGTTTGGAGACGATaGGGAGGGCCGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLVVWRR*GGPPLC
Trigger: ACACAGAGGCGGCCCTCCGCATCGTCTCCAAACAAC...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGTGCTCTCAGCAGAGCTaGAGAGGCCCTGCAATCACA +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLCSQQS*RGPAIT
Trigger: TGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCA...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCTCTCAGCAGAGCTaGAGAGGCCCTGCAATCACA +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTCSQQS*RGPAIT
Trigger: TGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCA...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTCCTTGAAGGACTCATaGTCTCAGCAGAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSSLKDS*SQQSCR
Trigger: TCTGCAGCTCTGCTGAGAGCATGAGTCCTTCAAGGA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGTCCTTGAAGGACTCATaGTCTCAGCAGAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMSLKDS*SQQSCR
Trigger: TCTGCAGCTCTGCTGAGAGCATGAGTCCTTCAAGGA...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGCTGCCAGTCTTAGCTaGCCCCCAGAAATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGAASLS*PPEMLL
Trigger: CAGGAGCATTTCTGGGGGGCAGCTAAGACTGGCAGC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGCCTTGGCTGAGAAGTaGTTCTCCAGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTALAEK*FSRVWP
Trigger: TGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCGCCTTGGCTGAGAAGTaGTTCTCCAGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPALAEK*FSRVWP
Trigger: TGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGTCCCAAGCCTCTGCTTaGCGGTCGCCATGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLSQASA*RSPCPF
Trigger: AAAAGGGCATGGCGACCGCCAAGCAGAGGCTTGGGA...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCCTCCGTGTCGATGGTaGACACACCATCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLPPCRW*THHPGT
Trigger: CGTACCTGGATGGTGTGTCCACCATCGACACGGAGG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCAGGACAAGTGGGAGTaGATAAGGCCTCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADQDKWE*IRPPPS
Trigger: GCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGTAGTCTGAGTCCTTaGAGCAGGCATCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGRSLSP*SRHPGG
Trigger: ACCACCTGGATGCCTGCTTCAAGGACTCAGACTACG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGTGTCTGTGTCGATGTaGAGCGAACCCTCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLVSVSM*SEPSSE
Trigger: CTCGGACGAGGGTTCGCTGCACATCGACACAGACAC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCGATGGGCCGACCCTTaGTGTTGGGCTGTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIRWADP*CWAVGS
Trigger: GCTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCATGGTCCGCCAGGCTaGTGCTATGCGACTCAGGCG +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIHGPPG*CYATQA
Trigger: CGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGGCTTGGCGGTCGCCATaGCCTTTTTCGTACGTTTTC +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLAWRSP*PFSYVF
Trigger: GAAAACGTACGAAAAAGGGCATGGCGACCGCCAAGC...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCATTTTCCCAAGCCTCTaGTTGGCGGTCGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLIFPSL*LAVAMP
Trigger: GGGCATGGCGACCGCCAAGCAGAGGCTTGGGAAAAT...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCAGCGGTCCTCAAACTTaGAGGGCCGCTTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGSGPQT*RAAFLG
Trigger: TCCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGCTGCCAGTCTTAGCTaGCCCCCAGAAATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLAASLS*PPEMLL
Trigger: CAGGAGCATTTCTGGGGGGCAGCTAAGACTGGCAGC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCGTGAGCTGACTTCCTaGCACACGGGCCACCACGTC +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIRELTS*HTGHHV
Trigger: GACGTGGTGGCCCGTGTGCCAGGAAGTCAGCTCACG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGGCTGCTGGCCGTGCTaGTGGAGGCCGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHGCWPC*WRPGWW
Trigger: CCACCACCCCGGCCTCCACCAGCACGGCCAGCAGCC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCAGCGGTGTTGTTGTTTaGAGACGATGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLSGVVV*RRCGGP
Trigger: CGGCCCTCCGCATCGTCTCCAAACAACAACACCGCT...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCAGGGCCGCTTTTCTaGGACAGATCACTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADAGPLF*DRSLLA
Trigger: TGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCTGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGAGCACTGTCTGGACTTaGCTGAGAATCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMSTVWT*LRITQE
Trigger: TTCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCT...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCAGGGCAGGGGTGCCTTaGCTGAGAAGTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLRAGVP*LRSASP
Trigger: TGGAGAAGCACTTCTCAGCCAAGGCACCCCTGCCCT...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCATTTGTGAGAGCCTTTaGATGCCTCCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPICESL*MPPAGA
Trigger: AGCACCTGCTGGAGGCATTCAAAGGCTCTCACAAAT...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGGGGTAAACGTAGTCTaGGTCCTTGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGGVNVV*VLEAGI
Trigger: GATGCCTGCTTCAAGGACTCAGACTACGTTTACCCC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCAAGGCCCTCCCTGGTaGGGCAGCTCGGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHQGPPW*GSSAPS
Trigger: GGAGGGTGCCGAGCTGCCTCACCAGGGAGGGCCTTG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGAAATACAGGATTGCCTaGGAAACAAATCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMKYRIA*ETNPAP
Trigger: AGGGGCTGGATTTGTTTCTCAGGCAATCCTGTATTT...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCAAATACAGGATTGCCTaGGAAACAAATCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSKYRIA*ETNPAP
Trigger: AGGGGCTGGATTTGTTTCTCAGGCAATCCTGTATTT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCTTTTCTGCTCCTCCTaGTGGGACAACTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADLFCSS*WDNLAA
Trigger: TGCAGCTAAGTTGTCCCAGCAGGAGGAGCAGAAAAG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTCCAGGTACGACCCATaGAGGCGACACCACACGCTG +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNISRYDP*RRHHTL
Trigger: CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTCGGGCCCTAGGGACTaGGTCCCTCCAAACAGGACA +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNISGPRD*VPPNRT
Trigger: TGTCCTGTTTGGAGGGACGCAGTCCCTAGGGCCCGA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCCAACACAGCTGCCGTaGAACCAGTCCTTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIPTQLP*NQSLQA
Trigger: CGCCTGCAAGGACTGGTTCCACGGCAGCTGTGTTGG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCAGGACACTCTTTGTaGCCTTGCCCTTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLSGHSL*PCPSWA
Trigger: CGCCCAAGAAGGGCAAGGCCACAAAGAGTGTCCTGA...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCTTCTGCTCCTCCTGCTaGGACAACTTAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGFCSSC*DNLAAA
Trigger: TGCTGCAGCTAAGTTGTCCCAGCAGGAGGAGCAGAA...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGTTCTGCTCCTCCTGCTaGGACAACTTAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLFCSSC*DNLAAA
Trigger: TGCTGCAGCTAAGTTGTCCCAGCAGGAGGAGCAGAA...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGGGGCTGGTGAGCATTaGCTCACTCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLGAGEH*LTLSSL
Trigger: CAAGGAAGACAGAGTGAGCCAATGCTCACCAGCCCC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCCCAGAAATGCTCCTaGGCATTCAGGCTGAACACC +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPQKCS*AFRLNT
Trigger: GGTGTTCAGCCTGAATGCCCAGGAGCATTTCTGGGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGGGCTCCGGGGGTCCTaGGCGGAGCAGAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHGLRGS*AEQKDP
Trigger: AGGATCCTTCTGCTCCGCTCAGGACCCCCGGAGCCC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGGTAAGGAGTCAGGTTTaGTGTTCTTGTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMVRSQV*CSCTST
Trigger: AGTGGAAGTACAAGAACAGCAAACCTGACTCCTTAC...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATAGGCCGGGGGCTGGCTaGTGGGGTTGTACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHRPGAG*WGCTPA
Trigger: CGCTGGAGTACAACCCCAGCAGCCAGCCCCCGGCCT...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGTCCTTGAAGGACTCATaGTCTCAGCAGAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLSLKDS*SQQSCR
Trigger: TCTGCAGCTCTGCTGAGAGCATGAGTCCTTCAAGGA...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCAGCGGTGTTGTTGTTTaGAGACGATGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNISGVVV*RRCGGP
Trigger: CGGCCCTCCGCATCGTCTCCAAACAACAACACCGCT...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTCCCAAGCCTCTGCTTaGCGGTCGCCATGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNISQASA*RSPCPF
Trigger: AAAAGGGCATGGCGACCGCCAAGCAGAGGCTTGGGA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCTCCAAACAGGACAAGTaGGAGTGGATAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGSKQDK*EWIRPP
Trigger: TGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGA...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTCACTCTTAGCAACTTaGGAAAAGACGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSSLLAT*EKTSIF
Trigger: GAAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCTGTCTGGACTTGGCTaGGAATCACTCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLLSGLG*ESLRKR
Trigger: TCTCTTCCTGAGTGATTCTCAGCCAAGTCCAGACAG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCAACTTTGATCTAAGTTaGCTTAGACCTCATGGACTC +
Preference number: 4 (lower is better)
Translates to: RENREVPTVSPRAAWPLSNFDLS*LRPHGL
Trigger: GAGTCCATGAGGTCTAAGGCAACTTAGATCAAAGTT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCTGGCGTGGTGGAGGTaGAGGTGGTGCCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHLAWWR*RWCRQR
Trigger: TCTCTGCCGGCACCACCTCCACCTCCACCACGCCAG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGTCGTACGTTTTCCTTTaGCAGCGGTGTTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLSYVFL*QRCCCL
Trigger: CAAACAACAACACCGCTGCCAAAGGAAAACGTACGA...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGAGGCTGTCCTTAAAGTaGAATAAGCGGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLRLSLK*NKRSSN
Trigger: GTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCT...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCCGCCGAGCACTGTCTaGACTTGGCTGAGAATCACT +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIPPSTV*TWLRIT
Trigger: AGTGATTCTCAGCCAAGTCCAGACAGTGCTCGGCGG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCAAACAGGACAAGTaGGAGTGGATAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLSKQDK*EWIRPP
Trigger: TGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGA...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATTTGACGTCAGGCGCTTaGCCCGGGCCGTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHLTSGA*PGPCLC
Trigger: GCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAA...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGCTTGGCGGTCGCCATaGCCTTTTTCGTACGTTTTC +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIAWRSP*PFSYVF
Trigger: GAAAACGTACGAAAAAGGGCATGGCGACCGCCAAGC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCATAAACATCCCACTTaGTCCTCCTCTTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLHKHPT*SSSFCV
Trigger: AACACAGAAAGAGGAGGAGCAAGTGGGATGTTTATG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGCTTCTTCTTTAAGGTaGACTTCCCATGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RPMQATPHADTGEQRSADASSLR*TSHGFS
Trigger: AGAAAACCCATGGGAAGTCCACCTTAAAGAAGAAGC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCCAGGGGCCATGGGCTaGGAGGTGCGGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVPGAMG*EVRPAW
Trigger: CCAGGCTGGCCGCACCTCCCAGCCCATGGCCCCTGG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCTCGTACGTTTTCCTTTaGCAGCGGTGTTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: TPHADTGEQRSADRKSSGSYVFL*QRCCCL
Trigger: CAAACAACAACACCGCTGCCAAAGGAAAACGTACGA...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCCTGGGCATTCAGGCTaGACACCCACCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHPGHSG*TPTILL
Trigger: CAGCAGGATGGTGGGTGTTCAGCCTGAATGCCCAGG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCTTTCCACTTCATATaGTCTCATCTGCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPFHFI*SHLHLH
Trigger: GTGGAGATGCAGATGAGAGCATATGAAGTGGAAAGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCATAAACATCCCACTTaGTCCTCCTCTTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLHKHPT*SSSFCV
Trigger: AACACAGAAAGAGGAGGAGCAAGTGGGATGTTTATG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCATCCTGCTGCCACCTaGCAACCAGAAAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHHPAAT*QPESSG
Trigger: CCCCGAGCTTTCTGGTTGGCAGGTGGCAGCAGGATG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGAACTTTGATCTAAGTTaGCTTAGACCTCATGGACTC +
Preference number: 4 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLNFDLS*LRPHGL
Trigger: GAGTCCATGAGGTCTAAGGCAACTTAGATCAAAGTT...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCTCAGGCGGGGGCTCTaGCGAGCTGCCCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVLRRGL*RAALLR
Trigger: TCGCAGGAGGGCAGCTCGCCAGAGCCCCCGCCTGAG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGCGGCTGTGTACTCATaGTCCGCCAGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHAAVYS*SARLLL
Trigger: TAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCGTACGTTTTCCTTTaGCAGCGGTGTTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLSYVFL*QRCCCL
Trigger: CAAACAACAACACCGCTGCCAAAGGAAAACGTACGA...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATAGCTCGGCACCCTCCTaGGAGGCAGATGTTTTCGCG +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHSSAPS*EADVFA
Trigger: CGCGAAAACATCTGCCTCCCAGGAGGGTGCCGAGCT...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGGGCTCCGGGGGTCCTaGGCGGAGCAGAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVGLRGS*AEQKDP
Trigger: AGGATCCTTCTGCTCCGCTCAGGACCCCCGGAGCCC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCAGCAGTCGTTTGCCTaGACTCTTGCCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHQQSFA*TLATAT
Trigger: GGTGGCAGTGGCAAGAGTGCAGGCAAACGACTGCTG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCACCCACCATCCTGCTaGCACCTGCCAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHHPPSC*HLPTRK
Trigger: CTTTCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCGCTTCTTCTTTAAGGTaGACTTCCCATGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLASSLR*TSHGFS
Trigger: AGAAAACCCATGGGAAGTCCACCTTAAAGAAGAAGC...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCGTAGTCTGAGTCCTTaGAGCAGGCATCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHRSLSP*SRHPGG
Trigger: ACCACCTGGATGCCTGCTTCAAGGACTCAGACTACG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGCGAGGCCTGGCTGCTaGCCGTGCTGGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASARPGC*PCWWRP
Trigger: CGGCCTCCACCAGCACGGCCAGCAGCCAGGCCTCGC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCAGGCTGTCCTTAAAGTaGAATAAGCGGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIRLSLK*NKRSSN
Trigger: GTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCT...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGAGGCTGCCAGCCTGTaGCCAGCTCTGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVEAASL*PALTLG
Trigger: CCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCCTC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCAGGACAAGTGGGAGTaGATAAGGCCTCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHQDKWE*IRPPPS
Trigger: GCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGGGGTAAACGTAGTCTaGGTCCTTGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHGVNVV*VLEAGI
Trigger: GATGCCTGCTTCAAGGACTCAGACTACGTTTACCCC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTTGACGTCAGGCGCTTaGCCCGGGCCGTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVLTSGA*PGPCLC
Trigger: GCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCTCGTCCTCATGCTCTaGCAAAGCCTGCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHLVLML*QSLLLR
Trigger: ACGAAGAAGCAGGCTTTGGCAGAGCATGAGGACGAG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCCTGCGAGGCCTGGCTaGTGGCCGTGCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASPARPG*WPCWWR
Trigger: CCTCCACCAGCACGGCCAGCAGCCAGGCCTCGCAGG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCATGGTCCGCCAGGCTaGTGCTATGCGACTCAGGCG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVHGPPG*CYATQA
Trigger: CGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTACGGTCCCTGCCACATaGCTTAGCCTGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVTVPAT*LSLGLP
Trigger: TGGGAGGCCCAGGCTAAGCCATGTGGCAGGGACCGT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGGCGACACCACACGCTaGCACGGGAGAACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVGDTTR*HGRTEK
Trigger: CTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGGTCCGCCAGGCTGCTaGTATGCGACTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASGPPGC*YATQAG
Trigger: CCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGAGCTGCAGAGGCCCTaGAATCACACCCACGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVELQRP*NHTHAQ
Trigger: CTGAGCGTGGGTGTGATTGCAGGGCCTCTGCAGCTC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCGCTTGTTGGGGAGATaGCAGCCGGGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVRLLGR*QPGRGK
Trigger: CTTGCCTCTTCCCGGCTGCCATCTCCCCAACAAGCG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGCCCCTCCGTGTCGATaGTGGACACACCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVAPPCR*WTHHPG
Trigger: ACCTGGATGGTGTGTCCACCATCGACACGGAGGGGC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGTCCAAGATGCCAGCTaGCGAGCTCCCACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVVQDAS*RAPTLL
Trigger: AAGGAGAGTGGGAGCTCGGCAGCTGGCATCTTGGAC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGTTGTTTGGAGACGATaGGGAGGGCCGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVVVWRR*GGPPLC
Trigger: ACACAGAGGCGGCCCTCCGCATCGTCTCCAAACAAC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTATTTTCCCAAGCCTCTaGTTGGCGGTCGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVIFPSL*LAVAMP
Trigger: GGGCATGGCGACCGCCAAGCAGAGGCTTGGGAAAAT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTGGAGGCATTCTCACTaGGCCGGATCTCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVWRHSH*AGSLWP
Trigger: TGGCCAAAGAGATCCGGCTCAGTGAGAATGCCTCCA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATAAATACAGGATTGCCTaGGAAACAAATCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHKYRIA*ETNPAP
Trigger: AGGGGCTGGATTTGTTTCTCAGGCAATCCTGTATTT...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCATGGTCCGCCAGGCTaGTGCTATGCGACTCAGGCG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASHGPPG*CYATQA
Trigger: CGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTGCTCTCAGCAGAGCTaGAGAGGCCCTGCAATCACA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVCSQQS*RGPAIT
Trigger: TGTGATTGCAGGGCCTCTGCAGCTCTGCTGAGAGCA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGCCTTGGCTGAGAAGTaGTTCTCCAGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVALAEK*FSRVWP
Trigger: TGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAGGCCTCCACCAAGCTaGCTCTCCCAGTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVRPPPS*LSQWTK
Trigger: TTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTTGGTGCCGGCAGAGATaGAGGTGGAGGTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASWCRQR*RWRWKG
Trigger: CCCCTTCCACCTCCACCTCCATCTCTGCCGGCACCA...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCCGCCGAGCACTGTCTaGACTTGGCTGAGAATCACT +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVPPSTV*TWLRIT
Trigger: AGTGATTCTCAGCCAAGTCCAGACAGTGCTCGGCGG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCCATGTAGCCCAGCGTaGGCTGACTTCCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASPCSPA*ADFLAH
Trigger: GTGTGCCAGGAAGTCAGCTCACGCTGGGCTACATGG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCATAAACATCCCACTTaGTCCTCCTCTTTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHHKHPT*SSSFCV
Trigger: AACACAGAAAGAGGAGGAGCAAGTGGGATGTTTATG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTTCCAGGTACGACCCATaGAGGCGACACCACACGCTG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASSRYDP*RRHHTL
Trigger: CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGA...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCTGTCTTGGCACCGATaGGCCGACCCTTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASLSWHR*ADPCCW
Trigger: CCAACAGCAAGGGTCGGCCCATCGGTGCCAAGACAG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTAGCTCGGCACCCTCCTaGGAGGCAGATGTTTTCGCG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASSSAPS*EADVFA
Trigger: CGCGAAAACATCTGCCTCCCAGGAGGGTGCCGAGCT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTGCTTCCCAGATTTGTaGGAGCCTTTGAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVCFPDL*EPLNAS
Trigger: GGAGGCATTCAAAGGCTCTCACAAATCTGGGAAGCA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCTGTCTGGACTTGGCTaGGAATCACTCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVLSGLG*ESLRKR
Trigger: TCTCTTCCTGAGTGATTCTCAGCCAAGTCCAGACAG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCTTTTCTGCTCCTCCTaGTGGGACAACTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVLFCSS*WDNLAA
Trigger: TGCAGCTAAGTTGTCCCAGCAGGAGGAGCAGAAAAG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGAACACCCACCATCCTaGTGCCACCTGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASEHPPS*CHLPTR
Trigger: TCTGGTTGGCAGGTGGCAGCAGGATGGTGGGTGTTC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTAGGGCAGGGGTGCCTTaGCTGAGAAGTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASRAGVP*LRSASP
Trigger: TGGAGAAGCACTTCTCAGCCAAGGCACCCCTGCCCT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCCTCCGTGTCGATGGTaGACACACCATCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASPPCRW*THHPGT
Trigger: CGTACCTGGATGGTGTGTCCACCATCGACACGGAGG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTCCAAACAGGACAAGTaGGAGTGGATAAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVSKQDK*EWIRPP
Trigger: TGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCGTTTTTCTTCCTCCTaGTGGGAAACTCGTCGATCT +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVRFSSS*WETRRS
Trigger: AGATCGACGAGTTTCCCATCAGGAGGAAGAAAAACG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTCATATGCTCTCATCTaGATCTCCACACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVSYALI*ISTLRL
Trigger: CAGCCTGAGTGTGGAGATGCAGATGAGAGCATATGA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGGGGCTGGTGAGCATTaGCTCACTCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASGAGEH*LTLSSL
Trigger: CAAGGAAGACAGAGTGAGCCAATGCTCACCAGCCCC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTTTCTGCTCCTCCTGCTaGGACAACTTAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASFCSSC*DNLAAA
Trigger: TGCTGCAGCTAAGTTGTCCCAGCAGGAGGAGCAGAA...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTCACTCTTAGCAACTTaGGAAAAGACGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVSLLAT*EKTSIF
Trigger: GAAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR GCA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAACTTTGATCTAAGTTaGCTTAGACCTCATGGACTC +
Preference number: 4 (lower is better)
Translates to: VLFASVKTECKAAQTSLVNFDLS*LRPHGL
Trigger: GAGTCCATGAGGTCTAAGGCAACTTAGATCAAAGTT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTAGGCTGTCCTTAAAGTaGAATAAGCGGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASRLSLK*NKRSSN
Trigger: GTTTGAGGACCGCTTATTCCACTTTAAGGACAGCCT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR TCA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTTCACTCTTAGCAACTTaGGAAAAGACGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: TLINYSITKHGNTSQGASSLLAT*EKTSIF
Trigger: GAAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGA...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 90 bp CGTAGGGGAGCCGGCAGACGCAGTACACGGGCACCGTCGCCATGTTaGCGCGCCGCGCCGCCGCTCGGCCCCGCCGCTGCGCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RRGAGRRSTRAPSPC*RAAPPLGPAAALPG
Trigger: CCCGGGCAGCGCAGCGGCGGGGCCGAGCGGCGGCGCGGCGCGGCAACATGGCGACGGTGCCCGTGTACTGCGTCTGCCGGCTCCCCTACG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359246.9
ENST00000375376.8
CDS GCA 90 bp CCGCCAGGCTGCTGCTATGCGACTCAGGCGGGGGCTCTGGCGAGCTaGCCTCCTGCGAGGCCTGGCTGCTGGCCGTGCTGGTGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: PPGCCYATQAGALAS*PPARPGCWPCWWRP
Trigger: CGGCCTCCACCAGCACGGCCAGCAGCCAGGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CCA 90 bp CTCATGGTCCGCCAGGCTGCTGCTATGCGACTCAGGCGGGGGCTCTaGCGAGCTGCCCTCCTGCGAGGCCTGGCTGCTGGCCGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LMVRQAAAMRLRRGL*RAALLRGLAAGRAG
Trigger: ACCAGCACGGCCAGCAGCCAGGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 90 bp AAGGTGCCAGCGGCTGTGTACTCATGGTCCGCCAGGCTGCTGCTATaGGACTCAGGCGGGGGCTCTGGCGAGCTGCCCTCCTGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: KVPAAVYSWSARLLL*DSGGGSGELPSCEA
Trigger: GGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGCTGGCACCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGCAGGCCTGTCCTGTCTaGGCACCGATGGGCCGACCC +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMQACPV*APMGRP
Trigger: GGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCTG...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMCPGPC*CQVRFF
Trigger: GAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCA...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGCTTGACGTCAGGCGCTaGCCCCGGGCCGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMLDVRR*PRAVFV
Trigger: CACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAG...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCCCGATGGGCCGACCCTaGCTGTTGGGCTGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: RENREVPTVSPRAAWPLSPMGRP*LLGCRE
Trigger: CTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCGG...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCAGGCCTGTCCTGTCTaGGCACCGATGGGCCGACCC +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTQACPV*APMGRP
Trigger: GGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCTG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCAGGGACAGACGCTTGTaGGGGAGATGGCAGCCGGGA +
Preference number: 5 (lower is better)
Translates to: RENREVPTVSPRAAWPLSRDRRL*GRWQPG
Trigger: TCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCT...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 90 bp AAGGTCCGGCTCCGCAGCTCCTTGATGAAGAGCTGGCTGCCATTCTaGACGGGCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: KVRLRSSLMKSWLPF*TGLTSGACPGPCLC
Trigger: GCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAGCTCTTCATCAAGGAGCTGCGGAGCCGGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS CCA 90 bp TCAGCACTGGGAAAGGTCCGGCTCCGCAGCTCCTTGATGAAGAGCTaGCTGCCATTCTGCACGGGCTTGACGTCAGGCGCTTGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: SALGKVRLRSSLMKS*LPFCTGLTSGACPG
Trigger: CCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAGCTCTTCATCAAGGAGCTGCGGAGCCGGACCTTTCCCAGTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTCPGPC*CQVRFF
Trigger: GAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCA...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCAGGCCTGTCCTGTCTaGGCACCGATGGGCCGACCC +
Preference number: 5 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLQACPV*APMGRP
Trigger: GGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCTG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCGGCTCCGCAGCTCCTaGATGAAGAGCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPRLRSS*MKSWLP
Trigger: TGGCAGCCAGCTCTTCATCAAGGAGCTGCGGAGCCG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGGCCGACCCTTGCTGTaGGGCTGTAGGGAGCGTCGT +
Preference number: 5 (lower is better)
Translates to: TPHADTGEQRSADRKSSGGRPLL*GCRERR
Trigger: ACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGCC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGAGGTCGACACTGTTCTaGGCAGCCTTGACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMRSTLF*AALTSG
Trigger: GCCTGACGTCAAGGCTGCCAAGAACAGTGTCGACCT...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTACACTCTTTGTGGCCTaGCCCTTCTTGGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTTLFVA*PFLGGS
Trigger: GGAGCCGCCCAAGAAGGGCAAGGCCACAAAGAGTGT...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCCCGATGGGCCGACCCTaGCTGTTGGGCTGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLPMGRP*LLGCRE
Trigger: CTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCGG...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCAGCGGTGTTGTTGTTaGGAGACGATGCGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTQRCCC*ETMRRA
Trigger: GGCCCTCCGCATCGTCTCCAAACAACAACACCGCTG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGCAGCGGTGTTGTTGTTaGGAGACGATGCGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLQRCCC*ETMRRA
Trigger: GGCCCTCCGCATCGTCTCCAAACAACAACACCGCTG...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCAGCGGTGTTGTTGTTaGGAGACGATGCGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RPMQATPHADTGEQRSADQRCCC*ETMRRA
Trigger: GGCCCTCCGCATCGTCTCCAAACAACAACACCGCTG...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTTGGCAGCGGTGTTGTaGTTTGGAGACGATGCGGAG +
Preference number: 5 (lower is better)
Translates to: RENREVPTVSPRAAWPLSLAAVL*FGDDAE
Trigger: CTCCGCATCGTCTCCAAACAACAACACCGCTGCCAA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGCCTTTGGCAGCGGTGTaGTTGTTTGGAGACGATGCG +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMPLAAV*LFGDDA
Trigger: CGCATCGTCTCCAAACAACAACACCGCTGCCAAAGG...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTTCCCAAGCCTCTGCTaGGCGGTCGCCATGCCCTTT +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTFPSLC*AVAMPF
Trigger: AAAGGGCATGGCGACCGCCAAGCAGAGGCTTGGGAA...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACTTCCCAAGCCTCTGCTaGGCGGTCGCCATGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RPMQATPHADTGEQRSADFPSLC*AVAMPF
Trigger: AAAGGGCATGGCGACCGCCAAGCAGAGGCTTGGGAA...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGTTCCCAAGCCTCTGCTaGGCGGTCGCCATGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLFPSLC*AVAMPF
Trigger: AAAGGGCATGGCGACCGCCAAGCAGAGGCTTGGGAA...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCGAGCACTGTCTGGACTaGGCTGAGAATCACTCAGGA +
Preference number: 5 (lower is better)
Translates to: RENREVPTVSPRAAWPLSEHCLD*AENHSG
Trigger: TCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCTC...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 90 bp ATGAAGAGCTGGCTGCCATTCTGCACGGGCTTGACGTCAGGCGCTTaGCCCGGGCCGTGTTTGTGCCAGGTCCGCTTCTTCTTTAAGGTG +
Preference number: 5 (lower is better)
Translates to: MKSWLPFCTGLTSGA*PGPCLCQVRFFFKV
Trigger: CACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAGCTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGGGGGCTTGGGGATTTaGGATGGCTTGGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: TPHADTGEQRSADRKSSGGGLGI*DGLGIF
Trigger: GAAGATGCCCAAGCCATCCAAAATCCCCAAGCCCCC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GCCTTGGCTGAGAAGTGCTTCTCCAGAGTGTGGCCAGCAGGGCAAGACGGTCCCCACTCAGGACACTCTTaGTGGCCTTGCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: ALAEKCFSRVWPAGQDGPHSGHS*WPCPSW
Trigger: CCAAGAAGGGCAAGGCCACAAAGAGTGTCCTGAGTG...GGGACCGTCTTGCCCTGCTGGCCACACTCTGGAGAAGCACTTCTCAGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGGCCGACCCTTGCTGTaGGGCTGTAGGGAGCGTCGT +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIGRPLL*GCRERR
Trigger: ACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGCC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTTGACGTCCATTTTCAAATaGAGGGGCCACGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TRKLGADPSSPAEHCLDLTSIFK*RGHAGL
Trigger: GAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACGT...CAAGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 90 bp TTCTGCACGGGCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTaGCAGGTCCGCTTCTTCTTTAAGGTGGACTTCCCATGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: FCTGLTSGACPGPCL*QVRFFFKVDFPWVF
Trigger: GAAAACCCATGGGAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCGGGGGCCTGAGAGCCTaGGAGCCGAGGAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIGGLRA*EPRSFL
Trigger: CAAGAAACTCCTCGGCTCCAAGGCTCTCAGGCCCCC...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCCTTTGGCAGCGGTGTaGTTGTTTGGAGACGATGCG +
Preference number: 5 (lower is better)
Translates to: TPHADTGEQRSADRKSSGPLAAV*LFGDDA
Trigger: CGCATCGTCTCCAAACAACAACACCGCTGCCAAAGG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCAGGGACAGACGCTTGTaGGGGAGATGGCAGCCGGGA +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIRDRRL*GRWQPG
Trigger: TCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCT...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCACGTCCATTTTCAAATaGAGGGGCCACGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TPHADTGEQRSADRKSSGTSIFK*RGHAGL
Trigger: GAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACGT...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCAAGCGGTCCTCAAACTaGCAGGGCCGCTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLKRSSN*QGRFSG
Trigger: CCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCTT...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCCTGTTCTTGGCAGCCTaGACGTCAGGCGCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNILFLAA*TSGACP
Trigger: GGGGCAAGCGCCTGACGTCAAGGCTGCCAAGAACAG...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS TCA 90 bp CACCGATGGGCCGACCCTTGCTGTTGGGCTGTAGGGAGCGTCGTCTaGGCCTTTCCTTTTCTTCGACCGGGACTTAAAGATGGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: HRWADPCCWAVGSVV*AFPFLRPGLKDGVV
Trigger: GACAACCCCATCTTTAAGTCCCGGTCGAAGAAAAGGAAAGGCTCAGACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 90 bp TTCTTGGCAGCCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTaGCAGGTCCGCTTCTTCTTTAAGGTGGACTTCCCATGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: FLAALTSGACPGPCL*QVRFFFKVDFPWVF
Trigger: GAAAACCCATGGGAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGGCTGCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTCCGGTCGGACGGCTTaGGAGGCATTCTCACTGAGC +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNISGRTA*EAFSLS
Trigger: GCTCAGTGAGAATGCCTCCAAAGCCGTCCGACCGGA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGAGTAAGGAGTCAGGTTaGCTGTTCTTGTACTTCCAC +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMSKESG*LFLYFH
Trigger: GTGGAAGTACAAGAACAGCAAACCTGACTCCTTACT...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGGACTTAAAGATGGGGTaGTCTTCATCTGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMDLKMG*SSSDSS
Trigger: ACTGGAGTCAGATGAAGACAACCCCATCTTTAAGTC...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTTGGCAGCGGTGTTGTaGTTTGGAGACGATGCGGAG +
Preference number: 5 (lower is better)
Translates to: RPSKQDKWEWIRPPPSCLLAAVL*FGDDAE
Trigger: CTCCGCATCGTCTCCAAACAACAACACCGCTGCCAA...GAGGCAGCTTGGTGGAGGCCTTATCCACTCCCACTTGTCCTGTTTGGAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GCCACGCTGGGCTCGCTCTGCCGGCTGAAGGGACAGACGCTTGTTGGGGAGATGTTCGTACGTTTTCCTTaGGCAGCGGTGTTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: ATLGSLCRLKGQTLVGEMFVRFP*AAVLLF
Trigger: AAACAACAACACCGCTGCCAAAGGAAAACGTACGAA...CATCTCCCCAACAAGCGTCTGTCCCTTCAGCCGGCAGAGCGAGCCCAGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCGCCTGGCCACTGTCCTTCGTACGTTTTCCTTaGGCAGCGGTGTTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: RENREVPTVSPRAAWPLSFVRFP*AAVLLF
Trigger: AAACAACAACACCGCTGCCAAAGGAAAACGTACGAA...GGACAGTGGCCAGGCGGCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGGCTGGCTGCTGGGGTaGTACTCCAGCGCGCCAACC +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHGWLLG*YSSAPT
Trigger: GGTTGGCGCGCTGGAGTACAACCCCAGCAGCCAGCC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATCTTGACGTCAGGCGCTaGCCCCGGGCCGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHLDVRR*PRAVFV
Trigger: CACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAG...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTTGGCAGCGGTGTTGTaGTTTGGAGACGATGCGGAG +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNILAAVL*FGDDAE
Trigger: CTCCGCATCGTCTCCAAACAACAACACCGCTGCCAA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCGACTTAAAGATGGGGTaGTCTTCATCTGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: TPHADTGEQRSADRKSSGDLKMG*SSSDSS
Trigger: ACTGGAGTCAGATGAAGACAACCCCATCTTTAAGTC...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTCTGCACAGACATCACTaGTTTTTCAGGCAATACCTT +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTLHRHH*FFRQYL
Trigger: AAGGTATTGCCTGAAAAACAAGTGATGTCTGTGCAG...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CAACCAGAAAGCTCGGGGCAGACCCTTCCTCACCCGCCGAGCACTGTCTGGACTGAGAGAGAGAACAGCTaGATGTCCAGGTTAGATTAT +
Preference number: 5 (lower is better)
Translates to: QPESSGQTLPHPPSTVWTERENS*MSRLDY
Trigger: ATAATCTAACCTGGACATCAAGCTGTTCTCTCTCTC...AGTCCAGACAGTGCTCGGCGGGTGAGGAAGGGTCTGCCCCGAGCTTTCTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp CGACCCATGCAGGCGACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACGAGAGAGAGAACAGCTaGATGTCCAGGTTAGATTAT +
Preference number: 5 (lower is better)
Translates to: RPMQATPHADTGEQRSADERENS*MSRLDY
Trigger: ATAATCTAACCTGGACATCAAGCTGTTCTCTCTCTC...GTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGTCGCCTGCATGGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGCTGCACAGACATCACTaGTTTTTCAGGCAATACCTT +
Preference number: 5 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLLHRHH*FFRQYL
Trigger: AAGGTATTGCCTGAAAAACAAGTGATGTCTGTGCAG...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACACCACACGCTGACACGGGAGAACAGAGAAGTGCCGACCGTAAGTCCTCGGGCCTGCACAGACATCACTaGTTTTTCAGGCAATACCTT +
Preference number: 5 (lower is better)
Translates to: TPHADTGEQRSADRKSSGLHRHH*FFRQYL
Trigger: AAGGTATTGCCTGAAAAACAAGTGATGTCTGTGCAG...GCCCGAGGACTTACGGTCGGCACTTCTCTGTTCTCCCGTGTCAGCGTGTGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATAAGGTCTTCTCCCCCTaGAGCACGTGGTACCAGGCA +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHKVFSP*STWYQA
Trigger: TGCCTGGTACCACGTGCTCAAGGGGGAGAAGACCTT...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLFASVKTECKAAQTSLVCPGPC*CQVRFF
Trigger: GAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCA...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCCATTCTGCACGGGCTaGACGTCAGGCGCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: VLFASVKTECKAAQTSLVPFCTG*TSGACP
Trigger: GGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTCCGATGGGCCGACCCTaGCTGTTGGGCTGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: VLFASVKTECKAAQTSLVPMGRP*LLGCRE
Trigger: CTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCGG...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GTGGGAGTGGATAAGGCCTCCACCAAGCTGCCTCTCCCAGTGGACAAAAACATCTTCGTACGTTTTCCTTaGGCAGCGGTGTTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: VGVDKASTKLPLPVDKNIFVRFP*AAVLLF
Trigger: AAACAACAACACCGCTGCCAAAGGAAAACGTACGAA...GATGTTTTTGTCCACTGGGAGAGGCAGCTTGGTGGAGGCCTTATCCACTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATACGTCCATTTTCAAATaGAGGGGCCACGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHTSIFK*RGHAGL
Trigger: GAGCCCAGCGTGGCCCCTCAATTTGAAAATGGACGT...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp TCGATGGTGGACACACCATCCAGGTACGACCCATGCAGGCGACACCACACGCTGATCACTCTTAGCAACTaGAGAAAAGACGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: SMVDTPSRYDPCRRHHTLITLSN*RKDVHF
Trigger: AAAATGGACGTCTTTTCTCAAGTTGCTAAGAGTGAT...CAGCGTGTGGTGTCGCCTGCATGGGTCGTACCTGGATGGTGTGTCCACCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTAGGGACAGACGCTTGTaGGGGAGATGGCAGCCGGGA +
Preference number: 5 (lower is better)
Translates to: VLFASVKTECKAAQTSLVRDRRL*GRWQPG
Trigger: TCCCGGCTGCCATCTCCCCAACAAGCGTCTGTCCCT...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGAGCACTGTCTGGACTaGGCTGAGAATCACTCAGGA +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHEHCLD*AENHSG
Trigger: TCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCTC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATTCAGGTTTGCTGTTCTaGTACTTCCACTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHSGLLF*YFHLAS
Trigger: AGAGGCCAAGTGGAAGTACAAGAACAGCAAACCTGA...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGAGGAGTCATCACTCTaGTACGCTGCCGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VLFASVKTECKAAQTSLVEESSL*YAAESS
Trigger: GCTGGACTCGGCAGCGTACAAGAGTGATGACTCCTC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGAGAACTTATTGTCTTaGTTTCCAGCTAGAGGCGAC +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHENLLS*FPARGD
Trigger: GTCGCCTCTAGCTGGAAACAAAGACAATAAGTTCTC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp GTACTATTTGCTTCTGTAAAGACAGAGTGTAAGGCTGCACAGACATCACTTGTTGGAAACTCGTCGATCTaGAGCTCACCGTCATCCGAC +
Preference number: 5 (lower is better)
Translates to: VLFASVKTECKAAQTSLVGNSSI*SSPSSD
Trigger: GTCGGATGACGGTGAGCTCAAGATCGACGAGTTTCC...AACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTTTACAGAAGCAAATAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS-3UTR CAA 90 bp AGGGCCGCTTTTCTGGGACAGATCACTCTTAGCAACTTGAGAAAAGACGTCCATGACTTAAAGATGGGGTaGTCTTCATCTGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: RAAFLGQITLSNLRKDVHDLKMG*SSSDSS
Trigger: ACTGGAGTCAGATGAAGACAACCCCATCTTTAAGTC...ATGGACGTCTTTTCTCAAGTTGCTAAGAGTGATCTGTCCCAGAAAAGCGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTAAGCGGTCCTCAAACTaGCAGGGCCGCTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TLINYSITKHGNTSQGASKRSSN*QGRFSG
Trigger: CCCAGAAAAGCGGCCCTGCAAGTTTGAGGACCGCTT...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTCCTTTGGCAGCGGTGTaGTTGTTTGGAGACGATGCG +
Preference number: 5 (lower is better)
Translates to: TLINYSITKHGNTSQGASPLAAV*LFGDDA
Trigger: CGCATCGTCTCCAAACAACAACACCGCTGCCAAAGG...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGAGCACTGTCTGGACTaGGCTGAGAATCACTCAGGA +
Preference number: 5 (lower is better)
Translates to: TLINYSITKHGNTSQGASEHCLD*AENHSG
Trigger: TCCTGAGTGATTCTCAGCCAAGTCCAGACAGTGCTC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS-3UTR CAA 90 bp ACATTAATAAATTACAGCATCACAAAACACGGAAACACTTCACAAGGTGCTAGTGAGAGAGAGAACAGCTaGATGTCCAGGTTAGATTAT +
Preference number: 5 (lower is better)
Translates to: TLINYSITKHGNTSQGASERENS*MSRLDY
Trigger: ATAATCTAACCTGGACATCAAGCTGTTCTCTCTCTC...ACTAGCACCTTGTGAAGTGTTTCCGTGTTTTGTGATGCTGTAATTTATTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CAA 72 bp AGCCGGCAGACGCAGTACACGGGCACCGTCGCCATGTaGCCGCGCCGCGCCGCCGCTCGGCCCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SRQTQYTGTVAM*PRRAAARPRRC
Trigger: GCAGCGGCGGGGCCGAGCGGCGGCGCGGCGCGGCAACATGGCGACGGTGCCCGTGTACTGCGTCTGCCGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359246.9
ENST00000375376.8
CDS CCA 72 bp CGCCAGGCTGCTGCTATGCGACTCAGGCGGGGGCTCTaGCGAGCTGCCCTCCTGCGAGGCCTGGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RQAAAMRLRRGL*RAALLRGLAAG
Trigger: GCCAGCAGCCAGGCCTCGCAGGAGGGCAGCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 72 bp GCGGCTGTGTACTCATGGTCCGCCAGGCTGCTGCTATaGGACTCAGGCGGGGGCTCTGGCGAGCTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AAVYSWSARLLL*DSGGGSGELPS
Trigger: GGAGGGCAGCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 72 bp TGCCAGCGGCTGTGTACTCATGGTCCGCCAGGCTGCTaGTATGCGACTCAGGCGGGGGCTCTGGCGAGCTGC +
Preference number: 6 (lower is better)
Translates to: CQRLCTHGPPGC*YATQAGALASC
Trigger: GCAGCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 72 bp AGGTGCCAGCGGCTGTGTACTCATGGTCCGCCAGGCTaGTGCTATGCGACTCAGGCGGGGGCTCTGGCGAGC +
Preference number: 6 (lower is better)
Translates to: RCQRLCTHGPPG*CYATQAGALAS
Trigger: GCTCGCCAGAGCCCCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGCTGGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CCA 72 bp TGGGCCCCGGTGAAGGTGCCAGCGGCTGTGTACTCATaGTCCGCCAGGCTGCTGCTATGCGACTCAGGCGGG +
Preference number: 6 (lower is better)
Translates to: WAPVKVPAAVYS*SARLLLCDSGG
Trigger: CCCGCCTGAGTCGCATAGCAGCAGCCTGGCGGACCATGAGTACACAGCCGCTGGCACCTTCACCGGGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CAA 90 bp CTCCGCAGCTCCTTGATGAAGAGCTGGCTGCCATTCTGCACGGGCTaGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTGCCAGGTCCGC +
Preference number: 6 (lower is better)
Translates to: LRSSLMKSWLPFCTG*TSGACPGPCLCQVR
Trigger: GCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAGCTCTTCATCAAGGAGCTGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS GCA 72 bp TGGCTGCCATTCTGCACGGGCTTGACGTCAGGCGCTTaGCCCGGGCCGTGTTTGTGCCAGGTCCGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: WLPFCTGLTSGA*PGPCLCQVRFF
Trigger: GAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS CCA 72 bp ACCCTCACGCACAGGCCTGTCCTGTCTTGGCACCGATaGGCCGACCCTTGCTGTTGGGCTGTAGGGAGCGTC +
Preference number: 6 (lower is better)
Translates to: TLTHRPVLSWHR*ADPCCWAVGSV
Trigger: GACGCTCCCTACAGCCCAACAGCAAGGGTCGGCCCATCGGTGCCAAGACAGGACAGGCCTGTGCGTGAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CAA 72 bp CTGGCTGCCATTCTGCACGGGCTTGACGTCAGGCGCTaGCCCCGGGCCGTGTTTGTGCCAGGTCCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LAAILHGLDVRR*PRAVFVPGPLL
Trigger: AAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS CAA 90 bp GCCACCACGTCTTCAGCACTGGGAAAGGTCCGGCTCCGCAGCTCCTaGATGAAGAGCTGGCTGCCATTCTGCACGGGCTTGACGTCAGGC +
Preference number: 6 (lower is better)
Translates to: ATTSSALGKVRLRSS*MKSWLPFCTGLTSG
Trigger: GCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAGCTCTTCATCAAGGAGCTGCGGAGCCGGACCTTTCCCAGTGCTGAAGACGTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS GCA 72 bp TCGACACTGTTCTTGGCAGCCTTGACGTCAGGCGCTTaGCCCGGGCCGTGTTTGTGCCAGGTCCGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: STLFLAALTSGA*PGPCLCQVRFF
Trigger: GAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGGCTGCCAAGAACAGTGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS CAA 72 bp TCCTTGATGAAGAGCTGGCTGCCATTCTGCACGGGCTaGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: SLMKSWLPFCTG*TSGACPGPCLC
Trigger: GCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGGCAGCCAGCTCTTCATCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS CAA 72 bp GGGGGCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTCTTTAAGGTGGACTTC +
Preference number: 6 (lower is better)
Translates to: GGLTSGACPGPC*CQVRFFFKVDF
Trigger: GAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375376.8
CDS CAA 72 bp GTCGACACTGTTCTTGGCAGCCTTGACGTCAGGCGCTaGCCCCGGGCCGTGTTTGTGCCAGGTCCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: VDTVLGSLDVRR*PRAVFVPGPLL
Trigger: AAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGGCTGCCAAGAACAGTGTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS GCA 72 bp GGCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTaGCAGGTCCGCTTCTTCTTTAAGGTGGACTTCCCA +
Preference number: 6 (lower is better)
Translates to: GLTSGACPGPCL*QVRFFFKVDFP
Trigger: TGGGAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359246.9
ENST00000375376.8
CDS GCA 72 bp CTTGCTTTTCTGCTCCTCCTGCTGGGACAACTTAGCTaGAGCAGCCGCCAGCCCGGTCTCGATGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: LAFLLLLLGQLS*SSRQPGLDGSH
Trigger: GTGGCTTCCATCGAGACCGGGCTGGCGGCTGCTGCAGCTAAGTTGTCCCAGCAGGAGGAGCAGAAAAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS GCA 72 bp GCCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTTGTaGCAGGTCCGCTTCTTCTTTAAGGTGGACTTCCCA +
Preference number: 6 (lower is better)
Translates to: ALTSGACPGPCL*QVRFFFKVDFP
Trigger: TGGGAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS CAA 72 bp ACGGGCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTCTTTAAGGTGGACTTC +
Preference number: 6 (lower is better)
Translates to: TGLTSGACPGPC*CQVRFFFKVDF
Trigger: GAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS CAA 72 bp GCAGCCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTCTTTAAGGTGGACTTC +
Preference number: 6 (lower is better)
Translates to: AALTSGACPGPC*CQVRFFFKVDF
Trigger: GAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS CAA 90 bp CCATTCTGCACGGGCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTCTTTAAGGTGGACTTCCCATGGGTT +
Preference number: 6 (lower is better)
Translates to: PFCTGLTSGACPGPC*CQVRFFFKVDFPWV
Trigger: AACCCATGGGAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGCCCGTGCAGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359246.9
CDS CAA 90 bp CTGTTCTTGGCAGCCTTGACGTCAGGCGCTTGCCCCGGGCCGTGTTaGTGCCAGGTCCGCTTCTTCTTTAAGGTGGACTTCCCATGGGTT +
Preference number: 6 (lower is better)
Translates to: LFLAALTSGACPGPC*CQVRFFFKVDFPWV
Trigger: AACCCATGGGAAGTCCACCTTAAAGAAGAAGCGGACCTGGCACAAACACGGCCCGGGGCAAGCGCCTGACGTCAAGGCTGCCAAGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610682.1
CDS GCA 72 bp TTTTCCTTTGGCAGCGGTGTTGTTGTTTGGAGACGATaGGGAGGGCCGCCTCTGTGTGAGAAAGACCCCAGG +
Preference number: 6 (lower is better)
Translates to: FSFGSGVVVWRR*GGPPLCEKDPR
Trigger: CCTGGGGTCTTTCTCACACAGAGGCGGCCCTCCGCATCGTCTCCAAACAACAACACCGCTGCCAAAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS TCA 72 bp CTGACTCCAGTGAGGGGTAAACGTAGTCTGAGTCCTTaGAGCAGGCATCCAGGTGGTCCTGCTCTTCCTCGT +
Preference number: 6 (lower is better)
Translates to: LTPVRGKRSLSP*SRHPGGPALPR
Trigger: ACGAGGAAGAGCAGGACCACCTGGATGCCTGCTTCAAGGACTCAGACTACGTTTACCCCTCACTGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS TCA 72 bp GCCGACCCTTGCTGTTGGGCTGTAGGGAGCGTCGTCTaGGCCTTTCCTTTTCTTCGACCGGGACTTAAAGAT +
Preference number: 6 (lower is better)
Translates to: ADPCCWAVGSVV*AFPFLRPGLKD
Trigger: ATCTTTAAGTCCCGGTCGAAGAAAAGGAAAGGCTCAGACGACGCTCCCTACAGCCCAACAGCAAGGGTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CAA 72 bp CCCTTTTTCGTACGTTTTCCTTTGGCAGCGGTGTTGTaGTTTGGAGACGATGCGGAGGGCCGCCTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: PFFVRFPLAAVL*FGDDAEGRLCV
Trigger: CACACAGAGGCGGCCCTCCGCATCGTCTCCAAACAACAACACCGCTGCCAAAGGAAAACGTACGAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CAA 72 bp ATGCCCTTTTTCGTACGTTTTCCTTTGGCAGCGGTGTaGTTGTTTGGAGACGATGCGGAGGGCCGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: MPFFVRFPLAAV*LFGDDAEGRLC
Trigger: ACAGAGGCGGCCCTCCGCATCGTCTCCAAACAACAACACCGCTGCCAAAGGAAAACGTACGAAAAAGGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1
CDS CCA 72 bp TTTCGTACGTTTTCCTTTGGCAGCGGTGTTGTTGTTTaGAGACGATGCGGAGGGCCGCCTCTGTGTGAGAAA +
Preference number: 6 (lower is better)
Translates to: FRTFSFGSGVVV*RRCGGPPLCEK
Trigger: TTTCTCACACAGAGGCGGCCCTCCGCATCGTCTCCAAACAACAACACCGCTGCCAAAGGAAAACGTACGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359246.9
ENST00000375376.8
ENST00000610682.1