RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF14 (Homo sapiens)

Ensembl gene IDs: ENSG00000106443

Ensembl transcript IDs: ENST00000403050.7, ENST00000423760.6, ENST00000473050.1, ENST00000476009.5, ENST00000489305.1, ENST00000490957.5, ENST00000521747.5, ENST00000634607.2, ENST00000642461.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGGTCTGGTAGATCGAGCTAGTTCTGCTTTGGCACGATACTGCTaGAGCCGGGCATTGATCCTTGCCTGTGCTTCTGGTGATAGTTGC +
Preference number: 1 (lower is better)
Translates to: WGLVDRASSALARYC*SRALILACASGDSC
Trigger: GCAACTATCACCAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAAAGCAGAACTAGCTCGATCTACCAGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR GCA 90 bp TTCCTTTTGAGCACAGGTCACATGGAAATAGGCTCTGCACATCCCTaGATCACAGCTAATGCAAACCCCAGTTCTAGCAAAGCGAGGGTC +
Preference number: 1 (lower is better)
Translates to: FLLSTGHMEIGSAHP*ITANANPSSSKARV
Trigger: GACCCTCGCTTTGCTAGAACTGGGGTTTGCATTAGCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATGTGACCTGTGCTCAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR GCA 90 bp TTCCATCTGGTAGGGTTTCCATGGCCATATCTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATTCCGAGCACTGCCAATAACTGTTTT +
Preference number: 1 (lower is better)
Translates to: FHLVGFPWPYLLPCH*SLPGHIPSTANNCF
Trigger: AAAACAGTTATTGGCAGTGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAGATATGGCCATGGAAACCCTACCAGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 90 bp CTGGTCACATTCCGAGCACTGCCAATAACTGTTTTTGGTCTTTCTTaGCATCCTTGTAAGAGGAGGATCCAGACATCCAAGATGGTAATG +
Preference number: 1 (lower is better)
Translates to: LVTFRALPITVFGLS*HPCKRRIQTSKMVM
Trigger: CATTACCATCTTGGATGTCTGGATCCTCCTCTTACAAGGATGCCAAGAAAGACCAAAAACAGTTATTGGCAGTGCTCGGAATGTGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 90 bp TTCGTTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTaGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCCT +
Preference number: 1 (lower is better)
Translates to: FVFVLWFSCFLSESS*VLVAHPVEQISLVP
Trigger: AGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 90 bp AACATATGCTGCTACAGGTCTAGCAGTGTGTCAGCCTTTTGTCCTTaGAATGAGGACCAGGAGTCAGCTGTTCTATTTGAATTCTTGTAT +
Preference number: 1 (lower is better)
Translates to: NICCYRSSSVSAFCP*NEDQESAVLFEFLY
Trigger: ATACAAGAATTCAAATAGAACAGCTGACTCCTGGTCCTCATTCCAAGGACAAAAGGCTGACACACTGCTAGACCTGTAGCAGCATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR TCA 90 bp ACAAAGCCCAGCATGTGCATCCAATTACATTACATCTTATGTACCTaGACAGCAGTGAATCTTATCGGCAGGCCTACAGAAAGCCTTAAA +
Preference number: 1 (lower is better)
Translates to: TKPSMCIQLHYILCT*TAVNLIGRPTESLK
Trigger: TTTAAGGCTTTCTGTAGGCCTGCCGATAAGATTCACTGCTGTTCAGGTACATAAGATGTAATGTAATTGGATGCACATGCTGGGCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR GCA 90 bp CAAGTTGCACATTCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTaGAACACAGACTGTCTTTGTCTTCTCTCTCTAGGAACTCTTTCC +
Preference number: 1 (lower is better)
Translates to: QVAHSVLKSSALGFF*NTDCLCLLSLGTLS
Trigger: GGAAAGAGTTCCTAGAGAGAGAAGACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGAATGTGCAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 90 bp TTTACAGGCATCACAAAACCAAGGTTCAGTGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACTCTCTCCATCAACTCCATAACAACC +
Preference number: 1 (lower is better)
Translates to: FTGITKPRFSGVFRS*THNRVTLSINSITT
Trigger: GGTTGTTATGGAGTTGATGGAGAGAGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCCACTGAACCTTGGTTTTGTGATGCCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 90 bp TGGTTGCTTATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTaGATTGTCCACTGGAAAGATATCTGTACTGATCCCCATGAGTTC +
Preference number: 1 (lower is better)
Translates to: WLLMFSPSIHTRTSI*IVHWKDICTDPHEF
Trigger: GAACTCATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACATAAGCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 90 bp AGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTTCCATACCTaGAACATGTCTGCTTTGTTCTTTAATAAACTGATTTCCATCTGC +
Preference number: 1 (lower is better)
Translates to: SNSSQHERRIRHFHT*NMSALFFNKLISIC
Trigger: GCAGATGGAAATCAGTTTATTAAAGAACAAAGCAGACATGTTTCAGGTATGGAAATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR TCA 90 bp TGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTaGCAAGACATGTATCCAGTATTTTTCAACAATGCACACATCAAA +
Preference number: 1 (lower is better)
Translates to: CQRSKRERHYLIRQF*QDMYPVFFNNAHIK
Trigger: TTTGATGTGTGCATTGTTGAAAAATACTGGATACATGTCTTGTCAGAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR TCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAGATTGCCTCCGAGGATaGGCTGTGGCAGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGDCLRG*AVAELG
Trigger: ACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATC...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521747.5
3UTR-3UTR GCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTAGCAAAGAATGGATCTaGTATATCCTCTTCCGCCGC +
Preference number: 2 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASSKEWI*YILFRR
Trigger: GCGGCGGAAGAGGATATAGCAGATCCATTCTTTGCT...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp GGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCTCTTGGAACCCAGGCCTaGGGTCTGGTAGATCGAGCT +
Preference number: 2 (lower is better)
Translates to: GFLSLGARKIAGIFNFCPLGTQA*GLVDRA
Trigger: AGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAG...AGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGGGGCAATTTTTCCCTTaGAACCCAGGCCTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWGQFFP*NPGLGS
Trigger: AGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCC...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAAGCAGACCTTCCTTTTaGGCACAGGTCACATGGAAA +
Preference number: 2 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGSRPSF*AQVTWK
Trigger: TTTCCATGTGACCTGTGCTCAAAAGGAAGGTCTGCT...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTTCCGCCGCTGCCTCTaGAAGCAGACCTTCCTTTTG +
Preference number: 2 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIFRRCL*KQTFLL
Trigger: CAAAAGGAAGGTCTGCTTTCAGAGGCAGCGGCGGAA...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp CTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCATGAGTTCTGCTGAAGCCGGGCATTaGTCCTTGCCTGTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LVSELSTGKISVLIPMSSAEAGH*SLPVLL
Trigger: CAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGC...AGAACTCATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp ATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTCTGAAGCACTGCTGGTaGGTGGTCTGGGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: IGIFLGSGGTSCGTNFTGLKHCW*VVWAIF
Trigger: AAAAATTGCCCAGACCACTCACCAGCAGTGCTTCAG...ACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp TCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTTAATCTGCCTCCTTaGTCGTTTGGTTCCATCTGG +
Preference number: 2 (lower is better)
Translates to: SSGSRVSYRNLLGFWWHILNLPP*SFGSIW
Trigger: CCAGATGGAACCAAACGATCAAGGAGGCAGATTAAG...GATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp AATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCCTTCTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATT +
Preference number: 2 (lower is better)
Translates to: NLLGFWWHILWNKFHWFLLLPCH*SLPGHI
Trigger: AATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAG...AAGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGTTCCATGGCCATATCTaGTTCCATGTCACTGCTCCC +
Preference number: 2 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWFHGHI*FHVTAP
Trigger: GGGAGCAGTGACATGGAAGCAGATATGGCCATGGAA...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CAA 90 bp CTTCGTTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTaGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCC +
Preference number: 2 (lower is better)
Translates to: LRFRPLVLVFLIGIF*GSGGTSCGTNFTGS
Trigger: GGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAAGGGCACAAACAATATaGACCCATCTTCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGRAQTI*THLPAS
Trigger: AGATGCTGGAAGATGGGTTCATATTGTTTGTGCCCT...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTTGGCACGATACTGCTaGAGCCGGGCATTGATCCTT +
Preference number: 2 (lower is better)
Translates to: CFLSESSWVLVAHPVEQILARYC*SRALIL
Trigger: AAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAA...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGATTGCCTCCGAGGATaGGCTGTGGCAGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: YILSKPDKQKATFCSDKLDCLRG*AVAELG
Trigger: ACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR GCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTCATGGAAATAGGCTCTaGACATCCCTGCATCACAGC +
Preference number: 2 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIHGNRL*TSLHHS
Trigger: GCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATG...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp TCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTGATCCCCATGAGTTCTaGTTTCCGCATAAGTTTACG +
Preference number: 2 (lower is better)
Translates to: SESSWVLVAHPVEQISLVDPHEF*FPHKFT
Trigger: CGTAAACTTATGCGGAAAGCAGAACTCATGGGGATC...AACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAGGTATATTCAACTTCTaGCCTGTGATTCTGCCTAGT +
Preference number: 2 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGGIFNF*PVILPS
Trigger: ACTAGGCAGAATCACAGGGCAGAAGTTGAATATACC...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATGATTGCCTCCGAGGATaGGCTGTGGCAGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHDCLRG*AVAELG
Trigger: ACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATC...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR-3UTR TCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTCTGAAGCACTGCTGGTaGGTGGTCTGGGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCLKHCW*VVWAIF
Trigger: AAAAATTGCCCAGACCACTCACCAGCAGTGCTTCAG...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTGGCTCTGCACATCCCTaGATCACAGCTAATGCAAAC +
Preference number: 2 (lower is better)
Translates to: ISVLIPMSSAFRISLRIAGSAHP*ITANAN
Trigger: GTTTGCATTAGCTGTGATGCAGGGATGTGCAGAGCC...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCCATGGAAATAGGCTCTaGACATCCCTGCATCACAGC +
Preference number: 2 (lower is better)
Translates to: TLELVSELSTGKISVLIPHGNRL*TSLHHS
Trigger: GCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATG...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTAGCACTGCTGGTGAGTaGTCTGGGCAATTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: ISVLIPMSSAFRISLRIASTAGE*SGQFFP
Trigger: AGGGAAAAATTGCCCAGACCACTCACCAGCAGTGCT...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp AACTCTTTCCTCATGTTTTTCTTCCTCAGGAACGAAGCTTCGTTTTCGTCCTCTTTGGTTTTCTCTCCTTaGGTGCTCGCAAAATTGCCG +
Preference number: 2 (lower is better)
Translates to: NSFLMFFFLRNEASFSSSLVFSP*VLAKLP
Trigger: CGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA...AGAGGACGAAAACGAAGCTTCGTTCCTGAGGAAGAAAAACATGAGGAAAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAGCCAATAACTGTTTTTaGTCTTTCTTGGCATCCTTG +
Preference number: 2 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGANNCF*SFLASL
Trigger: CAAGGATGCCAAGAAAGACCAAAAACAGTTATTGGC...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CAA 90 bp CCAGTTCCCTTGCAAGTTGCACATTCAGTTCTTAAATCTTCAGCCTaGGGCTTCTTTTGCAACACAGACTGTCTTTGTCTTCTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: PVPLQVAHSVLKSSA*GFFCNTDCLCLLSL
Trigger: TAGAGAGAGAAGACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGAATGTGCAACTTGCAAGGGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp ATCCTGATTAGGACACAGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCCCACAATTGTCACACTaGATTATTTCATCAGCGTCC +
Preference number: 2 (lower is better)
Translates to: ILIRTQFTARRNTTFTGIPQLSH*IISSAS
Trigger: GGACGCTGATGAAATAATTCAGTGTGACAATTGTGG...GATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACTGTGTCCTAATCAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp AGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTCCACAATTGTCACACTaGATTATTTCATCAGCGTCC +
Preference number: 2 (lower is better)
Translates to: SSSKARVFTKATLLGTIFPQLSH*IISSAS
Trigger: GGACGCTGATGAAATAATTCAGTGTGACAATTGTGG...AAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTAGCAGACCTTCCTTTTaGGCACAGGTCACATGGAAA +
Preference number: 2 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCSRPSF*AQVTWK
Trigger: TTTCCATGTGACCTGTGCTCAAAAGGAAGGTCTGCT...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp AATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCCTTTCACAAAATCTGCAGTaGGAGCTGGTTGCTTATGTT +
Preference number: 2 (lower is better)
Translates to: NLLGFWWHILWNKFHWFLSQNLQ*ELVAYV
Trigger: AACATAAGCAACCAGCTCTCACTGCAGATTTTGTGA...AAGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTAGCAAAGAATGGATCTaGTATATCCTCTTCCGCCGC +
Preference number: 2 (lower is better)
Translates to: ISVLIPMSSAFRISLRIASKEWI*YILFRR
Trigger: GCGGCGGAAGAGGATATAGCAGATCCATTCTTTGCT...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAAAAAGCTACACTCCTTaGCACCATATTTGGAATAGT +
Preference number: 2 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGKSYTP*HHIWNS
Trigger: ACTATTCCAAATATGGTGCCAAGGAGTGTAGCTTTT...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTGCCTCCTTGATCGTTTaGTTCCATCTGGTAGGGTTT +
Preference number: 2 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCASLIV*FHLVGF
Trigger: AAACCCTACCAGATGGAACCAAACGATCAAGGAGGC...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTGGTATATTCAACTTCTaGCCTGTGATTCTGCCTAGT +
Preference number: 2 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIGIFNF*PVILPS
Trigger: ACTAGGCAGAATCACAGGGCAGAAGTTGAATATACC...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CAA 90 bp TGCTTATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTGAATaGTCCACTGGAAAGATATCTGTACTGATCCCCATGAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: CLCFLLPSTLELVSE*STGKISVLIPMSSA
Trigger: AGCAGAACTCATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACATAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp AATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCCTTATAATTCACAAAATCTaGAGTGAGAGCTGGTTGCTT +
Preference number: 2 (lower is better)
Translates to: NLLGFWWHILWNKFHWFLIIHKI*SESWLL
Trigger: AAGCAACCAGCTCTCACTGCAGATTTTGTGAATTAT...AAGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR GCA 90 bp TCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTACAACTATAAAGTACTaGAGGAAGAGTAGATGTCTT +
Preference number: 2 (lower is better)
Translates to: SESSWVLVAHPVEQISLVTTIKY*RKSRCL
Trigger: AAGACATCTACTCTTCCTGCAGTACTTTATAGTTGT...AACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACT +
Preference number: 2 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCGVFRS*THNRVT
Trigger: AGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCC...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp GCTGGTTGCTTATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTGAATTGGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACT +
Preference number: 2 (lower is better)
Translates to: AGCLCFLLPSTLELVSELGVFRS*THNRVT
Trigger: AGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCC...CAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACATAAGCAACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp CTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCATGAGTTCTTTGAAAATTCCATCCTaGTTAGGACACAGTTCACAG +
Preference number: 2 (lower is better)
Translates to: LVSELSTGKISVLIPMSSLKIPS*LGHSSQ
Trigger: CTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAA...AGAACTCATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR TCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACATTGAAAATTCCATCCTaGTTAGGACACAGTTCACAG +
Preference number: 2 (lower is better)
Translates to: VSVTGRNLSISPKATPGTLKIPS*LGHSSQ
Trigger: CTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAA...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTCCTTGGCACCATATTTaGAATAGTTCATTTCCGTTA +
Preference number: 2 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCPWHHI*NSSFPL
Trigger: TAACGGAAATGAACTATTCCAAATATGGTGCCAAGG...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATGAATGGTTCTTAATGTaGTGTTCCAGGCCAGTAGCA +
Preference number: 2 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHEWFLM*CSRPVA
Trigger: TGCTACTGGCCTGGAACACCACATTAAGAACCATTC...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CAA 90 bp GGCTTCAGTAACTCTTCAGTAAGTCCAAACACTGTGTATCAACATTaGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATT +
Preference number: 2 (lower is better)
Translates to: GFSNSSVSPNTVYQH*PKKQEGKTLLNTTI
Trigger: AATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAGTGTTTGGACTTACTGAAGAGTTACTGAAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGGCAACTTTTTGCAGTaGCAAGCTTATAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIGNFLQ*QAYRKD
Trigger: GTCCTTTCTATAAGCTTGTCACTGCAAAAAGTTGCC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR GCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTACAACTATAAAGTACTaGAGGAAGAGTAGATGTCTT +
Preference number: 2 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCTTIKY*RKSRCL
Trigger: AAGACATCTACTCTTCCTGCAGTACTTTATAGTTGT...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTCTCCTTATAGTAGTTaGACCGATTATGGACACGGA +
Preference number: 2 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHSPYSS*TDYGHG
Trigger: TCCGTGTCCATAATCGGTCCAACTACTATAAGGAGA...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTATTCTATCCAAACCTaGCAAGCAAAAGGCAACTTT +
Preference number: 2 (lower is better)
Translates to: INICQRSKRERHYLIRQFYSIQT*QAKGNF
Trigger: AAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR TCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAACATACTTCTGCCGTTaGCTTAAAACTGGATCATTA +
Preference number: 2 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRTYFCR*LKTGSL
Trigger: TAATGATCCAGTTTTAAGTCAACGGCAGAAGTATGT...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAAAAGGCAACTTTTTaGAGTGACAAGCTTATAGAA +
Preference number: 2 (lower is better)
Translates to: LCINICQRSKRERHYLIRQKATF*SDKLIE
Trigger: TTCTATAAGCTTGTCACTGCAAAAAGTTGCCTTTTG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCAAAAGGCAACTTTTTaGAGTGACAAGCTTATAGAA +
Preference number: 2 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIQKATF*SDKLIE
Trigger: TTCTATAAGCTTGTCACTGCAAAAAGTTGCCTTTTG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR GCA 72 bp GTAGGGTTTCCATGGCCATATCTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATTCCGAGCACTGCCAAT +
Preference number: 3 (lower is better)
Translates to: VGFPWPYLLPCH*SLPGHIPSTAN
Trigger: ATTGGCAGTGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAGATATGGCCATGGAAACCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 72 bp GTAGATCGAGCTAGTTCTGCTTTGGCACGATACTGCTaGAGCCGGGCATTGATCCTTGCCTGTGCTTCTGGT +
Preference number: 3 (lower is better)
Translates to: VDRASSALARYC*SRALILACASG
Trigger: ACCAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAAAGCAGAACTAGCTCGATCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAAAGAGGTTTCCGGGATaGCCTCCGAGGATGAGCTGT +
Preference number: 3 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGKRFPG*PPRMSC
Trigger: ACAGCTCATCCTCGGAGGCAATCCCGGAAACCTCTT...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521747.5
3UTR TCA 72 bp GAATGGATCTGCTATATCCTCTTCCGCCGCTGCCTCTaGAAGCAGACCTTCCTTTTGAGCACAGGTCACATG +
Preference number: 3 (lower is better)
Translates to: EWICYILFRRCL*KQTFLLSTGHM
Trigger: CATGTGACCTGTGCTCAAAAGGAAGGTCTGCTTTCAGAGGCAGCGGCGGAAGAGGATATAGCAGATCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR GCA 72 bp TTCCATGGCCATATCTGCTTCCATGTCACTGCTCCCTaGCTGGTCACATTCCGAGCACTGCCAATAACTGTT +
Preference number: 3 (lower is better)
Translates to: FHGHICFHVTAP*LVTFRALPITV
Trigger: AACAGTTATTGGCAGTGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAGATATGGCCATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 72 bp TCCTTGATCGTTTGGTTCCATCTGGTAGGGTTTCCATaGCCATATCTGCTTCCATGTCACTGCTCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: SLIVWFHLVGFP*PYLLPCHCSLP
Trigger: AGGCAGGGAGCAGTGACATGGAAGCAGATATGGCCATGGAAACCCTACCAGATGGAACCAAACGATCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 72 bp ACTTATAAAAGAGGTTTCCGGGATTGCCTCCGAGGATaGGCTGTGGCAGAGTTGGGTCTCATGAAGGGTATC +
Preference number: 3 (lower is better)
Translates to: TYKRGFRDCLRG*AVAELGLMKGI
Trigger: GATACCCTTCATGAGACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATCCCGGAAACCTCTTTTATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521747.5
3UTR CCA 72 bp TGCTACAGGTCTAGCAGTGTGTCAGCCTTTTGTCCTTaGAATGAGGACCAGGAGTCAGCTGTTCTATTTGAA +
Preference number: 3 (lower is better)
Translates to: CYRSSSVSAFCP*NEDQESAVLFE
Trigger: TTCAAATAGAACAGCTGACTCCTGGTCCTCATTCCAAGGACAAAAGGCTGACACACTGCTAGACCTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR GCA 72 bp TTTACTTGGTTTTCTCTCCTTGGGTGCTCGCAAAATTaGCGGTATATTCAACTTCTGCCCTGTGATTCTGCC +
Preference number: 3 (lower is better)
Translates to: FTWFSLLGCSQN*RYIQLLPCDSA
Trigger: GGCAGAATCACAGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 72 bp GGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTaGTGGCACATCCTGTGGAACAAATTTCACTGGTTC +
Preference number: 3 (lower is better)
Translates to: GSRVSYRNLLGF*WHILWNKFHWF
Trigger: GAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 72 bp GTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTaGGTTCTGGTGGCACATCCTGTGGAACAAATTTCA +
Preference number: 3 (lower is better)
Translates to: VLWFSCFLSESS*VLVAHPVEQIS
Trigger: TGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAAGAGGTTTCCGGGATaGCCTCCGAGGATGAGCTGT +
Preference number: 3 (lower is better)
Translates to: YILSKPDKQKATFCSDKLKRFPG*PPRMSC
Trigger: ACAGCTCATCCTCGGAGGCAATCCCGGAAACCTCTT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAAAGAGGTTTCCGGGATaGCCTCCGAGGATGAGCTGT +
Preference number: 3 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPKRFPG*PPRMSC
Trigger: ACAGCTCATCCTCGGAGGCAATCCCGGAAACCTCTT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR TCA 72 bp CATCTTCCAGCATCTGTCTCCTTGAAAATTCCATCCTaGTTAGGACACAGTTCACAGCTAGGAGAAACACCA +
Preference number: 3 (lower is better)
Translates to: HLPASVSLKIPS*LGHSSQLGETP
Trigger: TGGTGTTTCTCCTAGCTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAAGGAGACAGATGCTGGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR GCA 72 bp TTCAGGGTCCTCACTTGCCTGAAAACTATCAGCCACTaGTTCCTGATATTTTCGGTGTGTTTGCTTAAGCAT +
Preference number: 3 (lower is better)
Translates to: FRVLTCLKTISH*FLIFSVCLLKH
Trigger: ATGCTTAAGCAAACACACCGAAAATATCAGGAAGCAGTGGCTGATAGTTTTCAGGCAAGTGAGGACCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CCA 72 bp TCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTaGCACATCCTGTGGAACAAATTTCACTGGTTCCTT +
Preference number: 3 (lower is better)
Translates to: SRVSYRNLLGFW*HILWNKFHWFL
Trigger: AAGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp TCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTGAACTAGTATCTGAATaGTCCACTGGAAAGATATCT +
Preference number: 3 (lower is better)
Translates to: SESSWVLVAHPVEQISLVELVSE*STGKIS
Trigger: AGATATCTTTCCAGTGGACAATTCAGATACTAGTTC...AACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 72 bp CAACCTTCATGGACTGTAATGCCACAATTGTCACACTaGATTATTTCATCAGCGTCCTCACTATTATCTCCC +
Preference number: 3 (lower is better)
Translates to: QPSWTVMPQLSH*IISSASSLLSP
Trigger: GGGAGATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 72 bp ATCACAAAACCAAGGTTCAGTGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACTCTCTCCATCAACTCC +
Preference number: 3 (lower is better)
Translates to: ITKPRFSGVFRS*THNRVTLSINS
Trigger: GGAGTTGATGGAGAGAGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCCACTGAACCTTGGTTTTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 72 bp AGCATGTGCATCCAATTACATTACATCTTATGTACCTaGACAGCAGTGAATCTTATCGGCAGGCCTACAGAA +
Preference number: 3 (lower is better)
Translates to: SMCIQLHYILCT*TAVNLIGRPTE
Trigger: TTCTGTAGGCCTGCCGATAAGATTCACTGCTGTTCAGGTACATAAGATGTAATGTAATTGGATGCACATGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CCA 72 bp GGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTaGAATAGTTCATTTCCGTTAGTGTTACTGGTCGTA +
Preference number: 3 (lower is better)
Translates to: GLHKSYTPWHHI*NSSFPLVLLVV
Trigger: TACGACCAGTAACACTAACGGAAATGAACTATTCCAAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CCA 72 bp TGCAAGTTGCACATTCAGTTCTTAAATCTTCAGCCTTaGGCTTCTTTTGCAACACAGACTGTCTTTGTCTTC +
Preference number: 3 (lower is better)
Translates to: CKLHIQFLNLQP*ASFATQTVFVF
Trigger: GAAGACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGAATGTGCAACTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp AACTCTTTCCTCATGTTTTTCTTCCTCAGGAACGAAGCTTCGTTTTCGTCCTCTGTTACTGGTCGTAATTaGTCAATATCTCCAAAGGCT +
Preference number: 3 (lower is better)
Translates to: NSFLMFFFLRNEASFSSSVTGRN*SISPKA
Trigger: AGCCTTTGGAGATATTGACAAATTACGACCAGTAAC...AGAGGACGAAAACGAAGCTTCGTTCCTGAGGAAGAAAAACATGAGGAAAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR TCA 72 bp ATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTaGATTGTCCACTGGAAAGATATCTGTACTGATCCC +
Preference number: 3 (lower is better)
Translates to: MFSPSIHTRTSI*IVHWKDICTDP
Trigger: GGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp GCTGGTTGCTTATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTGAATTGAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACT +
Preference number: 3 (lower is better)
Translates to: AGCLCFLLPSTLELVSELNMVHF*RAPVLT
Trigger: AGTCAAAACTGGAGCTCTCAAAAAATGGACCATATT...CAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACATAAGCAACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTGAACTAGTATCTGAATaGTCCACTGGAAAGATATCT +
Preference number: 3 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCELVSE*STGKIS
Trigger: AGATATCTTTCCAGTGGACAATTCAGATACTAGTTC...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACT +
Preference number: 3 (lower is better)
Translates to: INSITTFMDCNATIVTLNNMVHF*RAPVLT
Trigger: AGTCAAAACTGGAGCTCTCAAAAAATGGACCATATT...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR-3UTR CAA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATGCATCAGCTGGGAACTaGTTAGAAATGCAAATTTTC +
Preference number: 3 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHASAGN*LEMQIF
Trigger: GAAAATTTGCATTTCTAACAAGTTCCCAGCTGATGC...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CCA 72 bp ATTAGTGATACCTTTCAGAATTACTTAGTCGACATGTaGAACTCTCATGTATTTGTGATGCATTCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: ISDTFQNYLVDM*NSHVFVMHSKG
Trigger: TCCTTTGGAATGCATCACAAATACATGAGAGTTCCACATGTCGACTAAGTAATTCTGAAAGGTATCACTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR TCA 72 bp AGCAAGAGGGAAAGACATTACTTAATACGACAATTCTaGCAAGACATGTATCCAGTATTTTTCAACAATGCA +
Preference number: 3 (lower is better)
Translates to: SKRERHYLIRQF*QDMYPVFFNNA
Trigger: TGCATTGTTGAAAAATACTGGATACATGTCTTGTCAGAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
3UTR TCA 72 bp AATCATTTCACAAATATAAGACTAACGTGGAGGGCTTaGACCTATTTCATTAATACCACTACAGACTTCTGT +
Preference number: 3 (lower is better)
Translates to: NHFTNIRLTWRA*TYFINTTTDFC
Trigger: ACAGAAGTCTGTAGTGGTATTAATGAAATAGGTTCAAGCCCTCCACGTTAGTCTTATATTTGTGAAATGATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR TCA 72 bp TCTGAGTTTATGAGAAGGCTGAGATTTCTAAATAACTaGGAGCATACTCCTTCATACATAAAAACTGGAGTT +
Preference number: 3 (lower is better)
Translates to: SEFMRRLRFLNN*EHTPSYIKTGV
Trigger: AACTCCAGTTTTTATGTATGAAGGAGTATGCTCTCAGTTATTTAGAAATCTCAGCCTTCTCATAAACTCAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTGACTTAGGGAGAGGCTaGAGGAGCCCAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASDLGRG*RSPGSA
Trigger: GGCGCTGCCTGGGCTCCTGCAGCCTCTCCCTAAGTC...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTGATTGCCTCCGAGGATaGGCTGTGGCAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASDCLRG*AVAELG
Trigger: ACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATC...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTTTCCGCCGCTGCCTCTaGAAGCAGACCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASFRRCL*KQTFLL
Trigger: CAAAAGGAAGGTCTGCTTTCAGAGGCAGCGGCGGAA...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTGACTTAGGGAGAGGCTaGAGGAGCCCAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SESSWVLVAHPVEQISLVDLGRG*RSPGSA
Trigger: GGCGCTGCCTGGGCTCCTGCAGCCTCTCCCTAAGTC...AACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCGCTGAAGCCGGGCATTaGTCCTTGCCTGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSGSRVSYRNLLGFWWHIAEAGH*SLPVLL
Trigger: CAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGC...GATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCTCCCACAGCGCTCCCTaGCCGGAGAAGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPSHSAP*PEKTSG
Trigger: GCCGGAGGTCTTCTCCGGCCAGGGAGCGCTGTGGGA...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGGCCGAGGTCGGGGACTaGGGCCGCGAAGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: FISVLTIISQTNTANQNMAEVGD*GREDKS
Trigger: GGACTTGTCTTCGCGGCCCCAGTCCCCGACCTCGGC...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATCTTGGAACCCAGGCCTaGGGTCTGGTAGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYLGTQA*GLVDRA
Trigger: AGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAG...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp ATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTCGAAAGACCAGAAATTaGACAGCGCGAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: IGIFLGSGGTSCGTNFTGRKTRN*TARGRL
Trigger: CAGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCG...ACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TGCCTCCTTGATCGTTTGGTTCCATCTGGTAGGGTTTCCATGGCCATATCTGCTCTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: CLLDRLVPSGRVSMAISALLPCH*SLPGHI
Trigger: AATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAG...AGCAGATATGGCCATGGAAACCCTACCAGATGGAACCAAACGATCAAGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTTGTCTCCAGTTCCCTTaGAAGTTGCACATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASCLQFP*KLHIQF
Trigger: GAACTGAATGTGCAACTTGCAAGGGAACTGGAGACA...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATGCCGAGGTCGGGGACTaGGGCCGCGAAGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: INSITTFMDCNATIVTLNAEVGD*GREDKS
Trigger: GGACTTGTCTTCGCGGCCCCAGTCCCCGACCTCGGC...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGTCACTGCTCCCTGCCTaGTCACATTCCGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWSLLPA*SHSEHC
Trigger: GCAGTGCTCGGAATGTGACCAGGCAGGGAGCAGTGA...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTCCACAATTGTCACACTaGATTATTTCATCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASPQLSH*IISSAS
Trigger: GGACGCTGATGAAATAATTCAGTGTGACAATTGTGG...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp AACCCCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCGACAAGTCCGAAAGATaGTATTTAAAACCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: NPSSSKARVFTKATLLGTDKSER*YLKPAR
Trigger: GCGCGCCGGTTTTAAATAGCATCTTTCGGACTTGTC...GGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp ATCCTGATTAGGACACAGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCGCCAAAGGCTTCACCTaGCTCCTCTTGGAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: ILIRTQFTARRNTTFTGIAKGFT*LLLELR
Trigger: TCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGC...GATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACTGTGTCCTAATCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TGCCTCCTTGATCGTTTGGTTCCATCTGGTAGGGTTTCCATGGCCATATCTGCTCATGGAAATAGGCTCTaGACATCCCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: CLLDRLVPSGRVSMAISAHGNRL*TSLHHS
Trigger: GCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATG...AGCAGATATGGCCATGGAAACCCTACCAGATGGAACCAAACGATCAAGGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp AATGCAAACCCCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTCATGTCACTGCTCCCTaGCTGGTCACATTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: NANPSSSKARVFTKATLLHVTAP*LVTFRA
Trigger: TGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATG...AAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGGGGTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TTGGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCATGTCACTGCTCCCTaGCTGGTCACATTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LVFSPWVLAKLPVYSTSAHVTAP*LVTFRA
Trigger: TGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATG...GGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGCCGAGGTCGGGGACTaGGGCCGCGAAGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPAEVGD*GREDKS
Trigger: GGACTTGTCTTCGCGGCCCCAGTCCCCGACCTCGGC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCGGGCAATTTTTCCCTTaGAACCCAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVFSPWVLAKLPVYSTSAGQFFP*NPGLGS
Trigger: AGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCC...GGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TTGGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCTTGGCACGATACTGCTaGAGCCGGGCATTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LVFSPWVLAKLPVYSTSALARYC*SRALIL
Trigger: AAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAA...GGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATCTGAAGCACTGCTGGTaGGTGGTCTGGGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYLKHCW*VVWAIF
Trigger: AAAAATTGCCCAGACCACTCACCAGCAGTGCTTCAG...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TGCCTCCTTGATCGTTTGGTTCCATCTGGTAGGGTTTCCATGGCCATATCTGCTCTTAATCTGCCTCCTTaGTCGTTTGGTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: CLLDRLVPSGRVSMAISALNLPP*SFGSIW
Trigger: CCAGATGGAACCAAACGATCAAGGAGGCAGATTAAG...AGCAGATATGGCCATGGAAACCCTACCAGATGGAACCAAACGATCAAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp GGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCTGGCTCTGCACATCCCTaGATCACAGCTAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: GFLSLGARKIAGIFNFCPGSAHP*ITANAN
Trigger: GTTTGCATTAGCTGTGATGCAGGGATGTGCAGAGCC...AGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTCCATGGCCATATCTaGTTCCATGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYFHGHI*FHVTAP
Trigger: GGGAGCAGTGACATGGAAGCAGATATGGCCATGGAA...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTCCCACAGCGCTCCCTaGCCGGAGAAGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLISHSAP*PEKTSG
Trigger: GCCGGAGGTCTTCTCCGGCCAGGGAGCGCTGTGGGA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATGAGCTAGTTCTGCTTTaGCACGATACTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYELVLL*HDTAEA
Trigger: GGCTTCAGCAGTATCGTGCCAAAGCAGAACTAGCTC...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCACAAAACCAAGGTTCATCACTGCTCCCTGCCTaGTCACATTCCGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: SSQLGETPHLQASQNQGSSLLPA*SHSEHC
Trigger: GCAGTGCTCGGAATGTGACCAGGCAGGGAGCAGTGA...TGAACCTTGGTTTTGTGATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTCGAAAGACCAGAAATTaGACAGCGCGAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ISVLIPMSSAFRISLRIARKTRN*TARGRL
Trigger: CAGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCG...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGACTTAGGGAGAGGCTaGAGGAGCCCAGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIDLGRG*RSPGSA
Trigger: GGCGCTGCCTGGGCTCCTGCAGCCTCTCCCTAAGTC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR GCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACAGCCAAAGGCTTCACCTaGCTCCTCTTGGAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTAKGFT*LLLELR
Trigger: TCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGC...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp AATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCCTTTTCCAGCAGAGAAGCTaGCAAAGGCTTCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: NLLGFWWHILWNKFHWFLFQQRS*QRLHLP
Trigger: AGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAA...AAGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCAGCAAAGAATGGATCTaGTATATCCTCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSGSRVSYRNLLGFWWHISKEWI*YILFRR
Trigger: GCGGCGGAAGAGGATATAGCAGATCCATTCTTTGCT...GATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp CTGGGCAATTTTTCCCTTGGAACCCAGGCCTGGGGTCTGGTAGATCGAGCTAGTATAATTCACAAAATCTaGAGTGAGAGCTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LGNFSLGTQAWGLVDRASIIHKI*SESWLL
Trigger: AAGCAACCAGCTCTCACTGCAGATTTTGTGAATTAT...ACTAGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCCTTGGAACCCAGGCCTaGGGTCTGGTAGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPLGTQA*GLVDRA
Trigger: AGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAG...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AACCCCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCTTCGTTTTCGTCCTCTaGTTCTCGTGTTTCTTATCG +
Preference number: 4 (lower is better)
Translates to: NPSSSKARVFTKATLLGTFVFVL*FSCFLS
Trigger: CGATAAGAAACACGAGAACCAGAGGACGAAAACGAA...GGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp AGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTGGAATATCCATAAGGAATCCGTaGGGTGGTCGTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SKARVFTKATLLGTIFGISIRNP*GGRLEK
Trigger: CTTCTCCAAACGACCACCTCACGGATTCCTTATGGA...TATTCCAAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp GGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCTAGGGCACAAACAATATaGACCCATCTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GFLSLGARKIAGIFNFCPRAQTI*THLPAS
Trigger: AGATGCTGGAAGATGGGTTCATATTGTTTGTGCCCT...AGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTTTCCGCCGCTGCCTCTaGAAGCAGACCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCFRRCL*KQTFLL
Trigger: CAAAAGGAAGGTCTGCTTTCAGAGGCAGCGGCGGAA...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATGCTGAAGCCGGGCATTaGTCCTTGCCTGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: INSITTFMDCNATIVTLNAEAGH*SLPVLL
Trigger: CAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGC...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp ATCCTGATTAGGACACAGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCTCAACTTCTGCCCTGTaGTTCTGCCTAGTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ILIRTQFTARRNTTFTGISTSAL*FCLVKP
Trigger: GGGCTTTACTAGGCAGAATCACAGGGCAGAAGTTGA...GATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACTGTGTCCTAATCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTTCCAGCAGAGAAGCTaGCAAAGGCTTCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIFQQRS*QRLHLP
Trigger: AGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAA...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp AGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTGGCTCTGCACATCCCTaGATCACAGCTAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SSSKARVFTKATLLGTIFGSAHP*ITANAN
Trigger: GTTTGCATTAGCTGTGATGCAGGGATGTGCAGAGCC...AAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATGCAGTGAGAGCTGGTTaGTTATGTTTTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYAVRAG*LCFLLP
Trigger: TGGAAGGAGAAAACATAAGCAACCAGCTCTCACTGC...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp GATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCCTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: DICTDPHEFCFPHKFTNSLLPCH*SLPGHI
Trigger: AATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAG...GCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTCGTGAGGTGGTCGTTTaGAGAAGACTTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIREVVV*RRLRER
Trigger: CCTCTCCCTAAGTCTTCTCCAAACGACCACCTCACG...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTTGGTTTTCTCTCCTTaGGTGCTCGCAAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: IGIFLGSGGTSCGTNFTGLVFSP*VLAKLP
Trigger: CGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA...ACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AATGCAAACCCCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTCTGGTAGGGTTTCCATaGCCATATCTGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: NANPSSSKARVFTKATLLLVGFP*PYLLPC
Trigger: ACATGGAAGCAGATATGGCCATGGAAACCCTACCAG...AAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGGGGTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCGCCTCCTTGATCGTTTaGTTCCATCTGGTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LVFSPWVLAKLPVYSTSAASLIV*FHLVGF
Trigger: AAACCCTACCAGATGGAACCAAACGATCAAGGAGGC...GGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CAA 72 bp CGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTaGGGTTCTGGTGGCACATCCTGTGGAACAAATTTC +
Preference number: 4 (lower is better)
Translates to: RPLVLVFLIGIF*GSGGTSCGTNF
Trigger: GAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp GATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTCCATAAGGAATCCGTaGGGTGGTCGTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DICTDPHEFCFPHKFTNSSIRNP*GGRLEK
Trigger: CTTCTCCAAACGACCACCTCACGGATTCCTTATGGA...GCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TGCCTCCTTGATCGTTTGGTTCCATCTGGTAGGGTTTCCATGGCCATATCTGCTGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: CLLDRLVPSGRVSMAISAGVFRS*THNRVT
Trigger: AGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCC...AGCAGATATGGCCATGGAAACCCTACCAGATGGAACCAAACGATCAAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGCTGAAGCCGGGCATTaGTCCTTGCCTGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLAEAGH*SLPVLL
Trigger: CAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGCTGAAGCCGGGCATTaGTCCTTGCCTGTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPAEAGH*SLPVLL
Trigger: CAGAAGCACAGGCAAGGATCAATGCCCGGCTTCAGC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTCCTTAAGTTTACGAATAGCTaGAGCACTGCTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: NLLGFWWHILWNKFHWFLKFTNS*STAGEW
Trigger: CCACTCACCAGCAGTGCTTCAGCTATTCGTAAACTT...AAGGAACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp ATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTAGAATCAGCGAGTCCTaGGGCATCTCCAACTTTAAA +
Preference number: 4 (lower is better)
Translates to: IGIFLGSGGTSCGTNFTGRISES*GISNFK
Trigger: TTTAAAGTTGGAGATGCCTCAGGACTCGCTGATTCT...ACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGCCAAAGGCTTCACCTaGCTCCTCTTGGAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLAKGFT*LLLELR
Trigger: TCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AATGCAAACCCCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGCAGTGAGAGCTGGTTaGTTATGTTTTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NANPSSSKARVFTKATLLAVRAG*LCFLLP
Trigger: TGGAAGGAGAAAACATAAGCAACCAGCTCTCACTGC...AAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGGGGTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TTGGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCTTTTCTCTCCTTGGGTaGTCGCAAAATTGCCGGTAT +
Preference number: 4 (lower is better)
Translates to: LVFSPWVLAKLPVYSTSAFSLLG*SQNCRY
Trigger: ATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAA...GGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTTCCATGGCCATATCTaGTTCCATGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIFHGHI*FHVTAP
Trigger: GGGAGCAGTGACATGGAAGCAGATATGGCCATGGAA...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACACGTGAGGTGGTCGTTTaGAGAAGACTTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTREVVV*RRLRER
Trigger: CCTCTCCCTAAGTCTTCTCCAAACGACCACCTCACG...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACTTGGAACCCAGGCCTaGGGTCTGGTAGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPLGTQA*GLVDRA
Trigger: AGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp GTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAATCTGCAGTGAGAGCTaGTTGCTTATGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VLVFLIGIFLGSGGTSCGICSES*LLMFSP
Trigger: AGGAGAAAACATAAGCAACCAGCTCTCACTGCAGAT...TCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTCACTGCTCCCTGCCTaGTCACATTCCGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLSLLPA*SHSEHC
Trigger: GCAGTGCTCGGAATGTGACCAGGCAGGGAGCAGTGA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGGGGAGGGAGTAAAGTaGGCAGAGGGCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFGEGVK*AEGRSR
Trigger: CCTGGATCTGCCCTCTGCCCACTTTACTCCCTCCCC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGCTGAAGCACTGCTGGTaGGTGGTCTGGGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: FISVLTIISQTNTANQNMLKHCW*VVWAIF
Trigger: AAAAATTGCCCAGACCACTCACCAGCAGTGCTTCAG...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACATCAACTTCTGCCCTGTaGTTCTGCCTAGTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTSTSAL*FCLVKP
Trigger: GGGCTTTACTAGGCAGAATCACAGGGCAGAAGTTGA...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGATTGCCTCCGAGGATaGGCTGTGGCAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFDCLRG*AVAELG
Trigger: ACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCGAAAGACCAGAAATTaGACAGCGCGAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIRKTRN*TARGRL
Trigger: CAGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATGCCAAAGGCTTCACCTaGCTCCTCTTGGAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHAKGFT*LLLELR
Trigger: TCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGC...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTAGCAAAGAATGGATCTaGTATATCCTCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CFLSESSWVLVAHPVEQISKEWI*YILFRR
Trigger: GCGGCGGAAGAGGATATAGCAGATCCATTCTTTGCT...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACATGTCACTGCTCCCTaGCTGGTCACATTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPHVTAP*LVTFRA
Trigger: TGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCTTGGAACCCAGGCCTaGGGTCTGGTAGATCGAGCT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFLGTQA*GLVDRA
Trigger: AGCTCGATCTACCAGACCCCAGGCCTGGGTTCCAAG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGGGCAATTTTTCCCTTaGAACCCAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPGQFFP*NPGLGS
Trigger: AGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACAAGCACTGCTGGTGAGTaGTCTGGGCAATTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTSTAGE*SGQFFP
Trigger: AGGGAAAAATTGCCCAGACCACTCACCAGCAGTGCT...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCAGCACTGCTGGTGAGTaGTCTGGGCAATTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPSTAGE*SGQFFP
Trigger: AGGGAAAAATTGCCCAGACCACTCACCAGCAGTGCT...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGATCTGCAGTGAGAGCTaGTTGCTTATGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWICSES*LLMFSP
Trigger: AGGAGAAAACATAAGCAACCAGCTCTCACTGCAGAT...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp GGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCTGCCAATAACTGTTTTTaGTCTTTCTTGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GFLSLGARKIAGIFNFCPANNCF*SFLASL
Trigger: CAAGGATGCCAAGAAAGACCAAAAACAGTTATTGGC...AGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp GATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCCTGGTAGGGTTTCCATaGCCATATCTGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: DICTDPHEFCFPHKFTNSLVGFP*PYLLPC
Trigger: ACATGGAAGCAGATATGGCCATGGAAACCCTACCAG...GCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGTTCGTTTTCGTCCTCTaGTTCTCGTGTTTCTTATCG +
Preference number: 4 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWFVFVL*FSCFLS
Trigger: CGATAAGAAACACGAGAACCAGAGGACGAAAACGAA...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp ATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTTGAAAATTCCATCCTaGTTAGGACACAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: IGIFLGSGGTSCGTNFTGLKIPS*LGHSSQ
Trigger: CTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAA...ACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCATGAGTTCTAGCAGACCTTCCTTTTaGGCACAGGTCACATGGAAA +
Preference number: 4 (lower is better)
Translates to: LVSELSTGKISVLIPMSSSRPSF*AQVTWK
Trigger: TTTCCATGTGACCTGTGCTCAAAAGGAAGGTCTGCT...AGAACTCATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTCCGCCGCTGCCTCTaGAAGCAGACCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIFRRCL*KQTFLL
Trigger: CAAAAGGAAGGTCTGCTTTCAGAGGCAGCGGCGGAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTTCCGCCGCTGCCTCTaGAAGCAGACCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHFRRCL*KQTFLL
Trigger: CAAAAGGAAGGTCTGCTTTCAGAGGCAGCGGCGGAA...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCTTGGCACGATACTGCTaGAGCCGGGCATTGATCCTT +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIILARYC*SRALIL
Trigger: AAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAA...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATTGGCACGATACTGCTaGAGCCGGGCATTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRLARYC*SRALIL
Trigger: AAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp CTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCATGAGTTCTAAGTTTACGAATAGCTaGAGCACTGCTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LVSELSTGKISVLIPMSSKFTNS*STAGEW
Trigger: CCACTCACCAGCAGTGCTTCAGCTATTCGTAAACTT...AGAACTCATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATACTAGAACTAGTATCTaGATTGTCCACTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYTRTSI*IVHWKD
Trigger: ATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGT...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp AGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTTCACAAAATCTGCAGTaGGAGCTGGTTGCTTATGTT +
Preference number: 4 (lower is better)
Translates to: SSSKARVFTKATLLGTIFSQNLQ*ELVAYV
Trigger: AACATAAGCAACCAGCTCTCACTGCAGATTTTGTGA...AAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACACTTAATCTGCCTCCTTaGTCGTTTGGTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTLNLPP*SFGSIW
Trigger: CCAGATGGAACCAAACGATCAAGGAGGCAGATTAAG...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp AATGCAAACCCCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTCTCATGAAGGGTATCTaGCAAGATTTTCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: NANPSSSKARVFTKATLLLMKGI*QDFHCL
Trigger: GAGACAATGAAAATCTTGTCAGATACCCTTCATGAG...AAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGGGGTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521747.5
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGGGTCCTCACTTGCCTaGAAACTATCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLGSSLA*KLSATA
Trigger: AGCAGTGGCTGATAGTTTTCAGGCAAGTGAGGACCC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATTCCAGCAGAGAAGCTaGCAAAGGCTTCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPFQQRS*QRLHLP
Trigger: AGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATCATGGAAATAGGCTCTaGACATCCCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: INSITTFMDCNATIVTLNHGNRL*TSLHHS
Trigger: GCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATG...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTGGGTGCTCGCAAAATTaGCGGTATATTCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIGCSQN*RYIQLL
Trigger: CAGAAGTTGAATATACCGGCAATTTTGCGAGCACCC...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCATGTCACTGCTCCCTaGCTGGTCACATTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFHVTAP*LVTFRA
Trigger: TGCTCGGAATGTGACCAGGCAGGGAGCAGTGACATG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRLLPCH*SLPGHI
Trigger: AATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp GATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCGCCTTGGGCTTCTTTTaGAACACAGACTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: DICTDPHEFCFPHKFTNSALGFF*NTDCLC
Trigger: ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGC...GCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACGTGAGGTGGTCGTTTaGAGAAGACTTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRREVVV*RRLRER
Trigger: CCTCTCCCTAAGTCTTCTCCAAACGACCACCTCACG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp GATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCAAGGAATCCGTGAGGTaGTCGTTTGGAGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: DICTDPHEFCFPHKFTNSKESVR*SFGEDL
Trigger: TAAGTCTTCTCCAAACGACCACCTCACGGATTCCTT...GCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATGAGCTAGTTCTGCTTTaGCACGATACTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: INSITTFMDCNATIVTLNELVLL*HDTAEA
Trigger: GGCTTCAGCAGTATCGTGCCAAAGCAGAACTAGCTC...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAGGGCAATTTTTCCCTTaGAACCCAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRGQFFP*NPGLGS
Trigger: AGACCCCAGGCCTGGGTTCCAAGGGAAAAATTGCCC...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGTTGGTTTTCTCTCCTTaGGTGCTCGCAAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: FISVLTIISQTNTANQNMLVFSP*VLAKLP
Trigger: CGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTAATCTTCTTGGGTTCTaGTGGCACATCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ISVLIPMSSAFRISLRIANLLGF*WHILWN
Trigger: GTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TCAGTTCTTAAATCTTCAGCCTTGGGCTTCTTTTGCAACACAGACTGTCTTTGTAATCTTCTTGGGTTCTaGTGGCACATCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SVLKSSALGFFCNTDCLCNLLGF*WHILWN
Trigger: GTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT...ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACAAGGGCACAAACAATATaGACCCATCTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTRAQTI*THLPAS
Trigger: AGATGCTGGAAGATGGGTTCATATTGTTTGTGCCCT...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTGGCACGATACTGCTaGAGCCGGGCATTGATCCTT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILARYC*SRALIL
Trigger: AAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGACTAGAACTAGTATCTaGATTGTCCACTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWTRTSI*IVHWKD
Trigger: ATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGT...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACAAAATCTGCAGTaGGAGCTGGTTGCTTATGTT +
Preference number: 4 (lower is better)
Translates to: CFLSESSWVLVAHPVEQISQNLQ*ELVAYV
Trigger: AACATAAGCAACCAGCTCTCACTGCAGATTTTGTGA...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATCAACTTCTGCCCTGTaGTTCTGCCTAGTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSTSAL*FCLVKP
Trigger: GGGCTTTACTAGGCAGAATCACAGGGCAGAAGTTGA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCCAGAGTTGGGTCTCATaGAGGGTATCTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPQSWVS*RVSDKI
Trigger: AATCTTGTCAGATACCCTTCATGAGACCCAACTCTG...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521747.5
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACTTTTGTCCTTGGAATaGGGACCAGGAGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPLLSLE*GPGVSC
Trigger: ACAGCTGACTCCTGGTCCTCATTCCAAGGACAAAAG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTTCCAGCAGAGAAGCTaGCAAAGGCTTCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHFQQRS*QRLHLP
Trigger: AGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAA...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGGCTCTGCACATCCCTaGATCACAGCTAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPGSAHP*ITANAN
Trigger: GTTTGCATTAGCTGTGATGCAGGGATGTGCAGAGCC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACATGGAAATAGGCTCTaGACATCCCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRHGNRL*TSLHHS
Trigger: GCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATCTGCTTCCATGTCACTaGTCCCTGCCTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHLLPCH*SLPGHI
Trigger: AATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAG...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATTCCATGGCCATATCTaGTTCCATGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPFHGHI*FHVTAP
Trigger: GGGAGCAGTGACATGGAAGCAGATATGGCCATGGAA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTTCCATGGCCATATCTaGTTCCATGTCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLFHGHI*FHVTAP
Trigger: GGGAGCAGTGACATGGAAGCAGATATGGCCATGGAA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACAGCCTTGGGCTTCTTTTaGAACACAGACTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTALGFF*NTDCLC
Trigger: ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGC...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACAAAGGAATCCGTGAGGTaGTCGTTTGGAGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: VSVTGRNLSISPKATPGTKESVR*SFGEDL
Trigger: TAAGTCTTCTCCAAACGACCACCTCACGGATTCCTT...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATGCAACCCCCTTCACTaGCAGGGCTACTATGATCTT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPCNPLH*QGYYDL
Trigger: AAGATCATAGTAGCCCTGCCAGTGAAGGGGGTTGCA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGAAAAGCTACACTCCTTaGCACCATATTTGGAATAGT +
Preference number: 4 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWKSYTP*HHIWNS
Trigger: ACTATTCCAAATATGGTGCCAAGGAGTGTAGCTTTT...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGAGCTAGTTCTGCTTTaGCACGATACTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLELVLL*HDTAEA
Trigger: GGCTTCAGCAGTATCGTGCCAAAGCAGAACTAGCTC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAGCACTGCTGGTGAGTaGTCTGGGCAATTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLSTAGE*SGQFFP
Trigger: AGGGAAAAATTGCCCAGACCACTCACCAGCAGTGCT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCTTATCGGAATCTTCTTaGGTTCTGGTGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPLSESS*VLVAHP
Trigger: AGGATGTGCCACCAGAACCCAAGAAGATTCCGATAA...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTTTAAATCTTCAGCCTTaGGCTTCTTTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: SSSKARVFTKATLLGTIFLNLQP*ASFATQ
Trigger: CTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAA...AAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
3UTR CAA 72 bp TTTCTCCTTCCATCCACACTAGAACTAGTATCTGAATaGTCCACTGGAAAGATATCTGTACTGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: FLLPSTLELVSE*STGKISVLIPM
Trigger: CATGGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTCCATAAGGAATCCGTaGGGTGGTCGTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFSIRNP*GGRLEK
Trigger: CTTCTCCAAACGACCACCTCACGGATTCCTTATGGA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATCACTTCCCTCTTTCTaGGACGCAGATCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSLPSF*DADLPF
Trigger: AAAAGGGAGATCTGCGTCTCAGAAAGAGGGAAGTGA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR TCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCCCACAATTGTCACACTaGATTATTTCATCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPPQLSH*IISSAS
Trigger: GGACGCTGATGAAATAATTCAGTGTGACAATTGTGG...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp AGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCACAAAACCAAGGTTCATTGAAAATTCCATCCTaGTTAGGACACAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SSQLGETPHLQASQNQGSLKIPS*LGHSSQ
Trigger: CTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAA...TGAACCTTGGTTTTGTGATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAGCAGACCTTCCTTTTaGGCACAGGTCACATGGAAA +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSRPSF*AQVTWK
Trigger: TTTCCATGTGACCTGTGCTCAAAAGGAAGGTCTGCT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCTGAAGCACTGCTGGTaGGTGGTCTGGGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILKHCW*VVWAIF
Trigger: AAAAATTGCCCAGACCACTCACCAGCAGTGCTTCAG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCTGAAGCACTGCTGGTaGGTGGTCTGGGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFLKHCW*VVWAIF
Trigger: AAAAATTGCCCAGACCACTCACCAGCAGTGCTTCAG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAAGTTTACGAATAGCTaGAGCACTGCTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLKFTNS*STAGEW
Trigger: CCACTCACCAGCAGTGCTTCAGCTATTCGTAAACTT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTCAACTTCTGCCCTGTaGTTCTGCCTAGTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLISTSAL*FCLVKP
Trigger: GGGCTTTACTAGGCAGAATCACAGGGCAGAAGTTGA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACTTAATCTGCCTCCTTaGTCGTTTGGTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPLNLPP*SFGSIW
Trigger: CCAGATGGAACCAAACGATCAAGGAGGCAGATTAAG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTCAGCCACTGCTTCCTaGTATTTTCGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLSATAS*YFRCVC
Trigger: GCAAACACACCGAAAATATCAGGAAGCAGTGGCTGA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGTACCTGAACAGCAGTaGATCTTATCGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIVPEQQ*ILSAGL
Trigger: TAGGCCTGCCGATAAGATTCACTGCTGTTCAGGTAC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAAGCAGTACAACCTGCTaGGCTCAAGCTCCATGTAAC +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRSSTTC*AQAPCN
Trigger: GTTACATGGAGCTTGAGCTCAGCAGGTTGTACTGCT...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGACAAGTCCGAAAGATaGTATTTAAAACCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPDKSER*YLKPAR
Trigger: GCGCGCCGGTTTTAAATAGCATCTTTCGGACTTGTC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR GCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGGCTCTGCACATCCCTaGATCACAGCTAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFGSAHP*ITANAN
Trigger: GTTTGCATTAGCTGTGATGCAGGGATGTGCAGAGCC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATCATGGAAATAGGCTCTaGACATCCCTGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHHGNRL*TSLHHS
Trigger: GCTGTGATGCAGGGATGTGCAGAGCCTATTTCCATG...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAGCAAAGAATGGATCTaGTATATCCTCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSKEWI*YILFRR
Trigger: GCGGCGGAAGAGGATATAGCAGATCCATTCTTTGCT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp ATCCTGATTAGGACACAGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCATAATTCACAAAATCTaGAGTGAGAGCTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ILIRTQFTARRNTTFTGIIIHKI*SESWLL
Trigger: AAGCAACCAGCTCTCACTGCAGATTTTGTGAATTAT...GATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACTGTGTCCTAATCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGGGTATATTCAACTTCTaGCCTGTGATTCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: FISVLTIISQTNTANQNMGIFNF*PVILPS
Trigger: ACTAGGCAGAATCACAGGGCAGAAGTTGAATATACC...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCGGTATATTCAACTTCTaGCCTGTGATTCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: TLELVSELSTGKISVLIPGIFNF*PVILPS
Trigger: ACTAGGCAGAATCACAGGGCAGAAGTTGAATATACC...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATGGGTGCTCGCAAAATTaGCGGTATATTCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: INSITTFMDCNATIVTLNGCSQN*RYIQLL
Trigger: CAGAAGTTGAATATACCGGCAATTTTGCGAGCACCC...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATTCAGGGTCCTCACTTaGCTGAAAACTATCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRFRVLT*LKTISH
Trigger: GTGGCTGATAGTTTTCAGGCAAGTGAGGACCCTGAA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGGGTCAGGCTATCATTaGTCAGTTCCTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLGSGYH*SVPHHQ
Trigger: CTGATGATGAGGAACTGACCAATGATAGCCTGACCC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGAGCTAGTTCTGCTTTaGCACGATACTGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFELVLL*HDTAEA
Trigger: GGCTTCAGCAGTATCGTGCCAAAGCAGAACTAGCTC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAAGCACTGCTGGTGAGTaGTCTGGGCAATTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRSTAGE*SGQFFP
Trigger: AGGGAAAAATTGCCCAGACCACTCACCAGCAGTGCT...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTTGGTTTTCTCTCCTTaGGTGCTCGCAAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLLVFSP*VLAKLP
Trigger: CGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp AGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCACAAAACCAAGGTTCAGCCAATAACTGTTTTTaGTCTTTCTTGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SSQLGETPHLQASQNQGSANNCF*SFLASL
Trigger: CAAGGATGCCAAGAAAGACCAAAAACAGTTATTGGC...TGAACCTTGGTTTTGTGATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTCTGGTAGGGTTTCCATaGCCATATCTGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLLVGFP*PYLLPC
Trigger: ACATGGAAGCAGATATGGCCATGGAAACCCTACCAG...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCGCCTCCTTGATCGTTTaGTTCCATCTGGTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIIASLIV*FHLVGF
Trigger: AAACCCTACCAGATGGAACCAAACGATCAAGGAGGC...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAATCTTCTTGGGTTCTaGTGGCACATCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLNLLGF*WHILWN
Trigger: GTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCTGGCAGGGCTACTATaGTCTTCATCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFLAGLL*SSSLPS
Trigger: TGAAGGCAATGATGAAGATCATAGTAGCCCTGCCAG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR TCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: ISVLIPMSSAFRISLRIAGVFRS*THNRVT
Trigger: AGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCC...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTAGCAGACCTTCCTTTTaGGCACAGGTCACATGGAAA +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLISRPSF*AQVTWK
Trigger: TTTCCATGTGACCTGTGCTCAAAAGGAAGGTCTGCT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCTTAATCTGCCTCCTTaGTCGTTTGGTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILNLPP*SFGSIW
Trigger: CCAGATGGAACCAAACGATCAAGGAGGCAGATTAAG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAGAGTTGGGTCTCATaGAGGGTATCTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRQSWVS*RVSDKI
Trigger: AATCTTGTCAGATACCCTTCATGAGACCCAACTCTG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTCAGAGTTGGGTCTCATaGAGGGTATCTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLQSWVS*RVSDKI
Trigger: AATCTTGTCAGATACCCTTCATGAGACCCAACTCTG...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCAGAATCAGCGAGTCCTaGGGCATCTCCAACTTTAAA +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIIRISES*GISNFK
Trigger: TTTAAAGTTGGAGATGCCTCAGGACTCGCTGATTCT...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAGAATCAGCGAGTCCTaGGGCATCTCCAACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRRISES*GISNFK
Trigger: TTTAAAGTTGGAGATGCCTCAGGACTCGCTGATTCT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGATAGGCAAGTTCTCTaGGGTTCTAGCTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPDRQVL*GSSSLK
Trigger: TTTGAGTGAGCTAGAACCTCAGAGAACTTGCCTATC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAGTCCTCATTACTCTTaGTTTGAGATAGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSPHYS*FEIGSG
Trigger: GCCTGACCCTATCTCAAAGCAAGAGTAATGAGGACT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATAGCAAAGAATGGATCTaGTATATCCTCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHSKEWI*YILFRR
Trigger: GCGGCGGAAGAGGATATAGCAGATCCATTCTTTGCT...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAGGGTGCTCGCAAAATTaGCGGTATATTCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRGCSQN*RYIQLL
Trigger: CAGAAGTTGAATATACCGGCAATTTTGCGAGCACCC...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCTTTTCTCTCCTTGGGTaGTCGCAAAATTGCCGGTAT +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIIFSLLG*SQNCRY
Trigger: ATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAA...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATGTCTCCAGTTCCCTTaGAAGTTGCACATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPCLQFP*KLHIQF
Trigger: GAACTGAATGTGCAACTTGCAAGGGAACTGGAGACA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCTGTCTCCAGTTCCCTTaGAAGTTGCACATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIICLQFP*KLHIQF
Trigger: GAACTGAATGTGCAACTTGCAAGGGAACTGGAGACA...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTGTCTCCAGTTCCCTTaGAAGTTGCACATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLCLQFP*KLHIQF
Trigger: GAACTGAATGTGCAACTTGCAAGGGAACTGGAGACA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp GATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCAAAACTTTATTAGCCTaGACCAGAAGCAACGAAAGA +
Preference number: 4 (lower is better)
Translates to: DICTDPHEFCFPHKFTNSKTLLA*TRSNER
Trigger: TCTTTCGTTGCTTCTGGTCCAGGCTAATAAAGTTTT...GCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAAGGAATCCGTGAGGTaGTCGTTTGGAGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLKESVR*SFGEDL
Trigger: TAAGTCTTCTCCAAACGACCACCTCACGGATTCCTT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACACAAAATCCAGAAGTaGTCGGTTTCGTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRHKIQK*SVSSKV
Trigger: AACCTTCGACGAAACCGACCACTTCTGGATTTTGTG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTTGGTTTTCTCTCCTTaGGTGCTCGCAAAATTGCCG +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFLVFSP*VLAKLP
Trigger: CGGCAATTTTGCGAGCACCCAAGGAGAGAAAACCAA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCTGGTAGGGTTTCCATaGCCATATCTGCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILVGFP*PYLLPC
Trigger: ACATGGAAGCAGATATGGCCATGGAAACCCTACCAG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGCCTCCTTGATCGTTTaGTTCCATCTGGTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIASLIV*FHLVGF
Trigger: AAACCCTACCAGATGGAACCAAACGATCAAGGAGGC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGCCTCCTTGATCGTTTaGTTCCATCTGGTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFASLIV*FHLVGF
Trigger: AAACCCTACCAGATGGAACCAAACGATCAAGGAGGC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTAATCTTCTTGGGTTCTaGTGGCACATCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLINLLGF*WHILWN
Trigger: GTTCCACAGGATGTGCCACCAGAACCCAAGAAGATT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCTTATCGGAATCTTCTTaGGTTCTGGTGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIILSESS*VLVAHP
Trigger: AGGATGTGCCACCAGAACCCAAGAAGATTCCGATAA...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTTTAAATCTTCAGCCTTaGGCTTCTTTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: ISVLIPMSSAFRISLRIALNLQP*ASFATQ
Trigger: CTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAA...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTCAGCCTTTTGTCCTTaGAATGAGGACCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFSAFCP*NEDQES
Trigger: TGACTCCTGGTCCTCATTCCAAGGACAAAAGGCTGA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACCACAATTGTCACACTaGATTATTTCATCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRPQLSH*IISSAS
Trigger: GGACGCTGATGAAATAATTCAGTGTGACAATTGTGG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTAGGGCACAAACAATATaGACCCATCTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIRAQTI*THLPAS
Trigger: AGATGCTGGAAGATGGGTTCATATTGTTTGTGCCCT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATAGGGCACAAACAATATaGACCCATCTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHRAQTI*THLPAS
Trigger: AGATGCTGGAAGATGGGTTCATATTGTTTGTGCCCT...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATCACAAAATCTGCAGTaGGAGCTGGTTGCTTATGTT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSQNLQ*ELVAYV
Trigger: AACATAAGCAACCAGCTCTCACTGCAGATTTTGTGA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTCACAAAATCTGCAGTaGGAGCTGGTTGCTTATGTT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLSQNLQ*ELVAYV
Trigger: AACATAAGCAACCAGCTCTCACTGCAGATTTTGTGA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGGCAACTTTTTGCAGTaGCAAGCTTATAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPGNFLQ*QAYRKD
Trigger: GTCCTTTCTATAAGCTTGTCACTGCAAAAAGTTGCC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGGCAACTTTTTGCAGTaGCAAGCTTATAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLGNFLQ*QAYRKD
Trigger: GTCCTTTCTATAAGCTTGTCACTGCAAAAAGTTGCC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATCTTACTGGACACAAGTaGACTCTAGCAGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHLTGHK*TLAELA
Trigger: TGCAAGTTCTGCTAGAGTTCACTTGTGTCCAGTAAG...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGATCCCCATGAGTTCTaGTTTCCGCATAAGTTTACG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIDPHEF*FPHKFT
Trigger: CGTAAACTTATGCGGAAAGCAGAACTCATGGGGATC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGCAGTGAGAGCTGGTTaGTTATGTTTTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFAVRAG*LCFLLP
Trigger: TGGAAGGAGAAAACATAAGCAACCAGCTCTCACTGC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGGTATATTCAACTTCTaGCCTGTGATTCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPGIFNF*PVILPS
Trigger: ACTAGGCAGAATCACAGGGCAGAAGTTGAATATACC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATGGGTGCTCGCAAAATTaGCGGTATATTCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHGCSQN*RYIQLL
Trigger: CAGAAGTTGAATATACCGGCAATTTTGCGAGCACCC...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTTTCTCTCCTTGGGTaGTCGCAAAATTGCCGGTAT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIFSLLG*SQNCRY
Trigger: ATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTTTTCTCTCCTTGGGTaGTCGCAAAATTGCCGGTAT +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHFSLLG*SQNCRY
Trigger: ATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAA...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AACTCTTTCCTCATGTTTTTCTTCCTCAGGAACGAAGCTTCGTTTTCGTCCTCTACAACTATAAAGTACTaGAGGAAGAGTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: NSFLMFFFLRNEASFSSSTTIKY*RKSRCL
Trigger: AAGACATCTACTCTTCCTGCAGTACTTTATAGTTGT...AGAGGACGAAAACGAAGCTTCGTTCCTGAGGAAGAAAAACATGAGGAAAGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGCCTTGGGCTTCTTTTaGAACACAGACTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIALGFF*NTDCLC
Trigger: ACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp GCTGGTTGCTTATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTGAATTGCCTTGGCACCATATTTaGAATAGTTCATTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: AGCLCFLLPSTLELVSELPWHHI*NSSFPL
Trigger: TAACGGAAATGAACTATTCCAAATATGGTGCCAAGG...CAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACATAAGCAACCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTCCTTGGCACCATATTTaGAATAGTTCATTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: ISVLIPMSSAFRISLRIAPWHHI*NSSFPL
Trigger: TAACGGAAATGAACTATTCCAAATATGGTGCCAAGG...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAATCTGCAGTGAGAGCTaGTTGCTTATGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPICSES*LLMFSP
Trigger: AGGAGAAAACATAAGCAACCAGCTCTCACTGCAGAT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTTATCGGAATCTTCTTaGGTTCTGGTGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFLSESS*VLVAHP
Trigger: AGGATGTGCCACCAGAACCCAAGAAGATTCCGATAA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGATTATCGGAATCTTCTTaGGTTCTGGTGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRLSESS*VLVAHP
Trigger: AGGATGTGCCACCAGAACCCAAGAAGATTCCGATAA...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATCTCCTTATAGTAGTTaGACCGATTATGGACACGGA +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRSPYSS*TDYGHG
Trigger: TCCGTGTCCATAATCGGTCCAACTACTATAAGGAGA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAGAATGGTTCTTAATGTaGTGTTCCAGGCCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLREWFLM*CSRPVA
Trigger: TGCTACTGGCCTGGAACACCACATTAAGAACCATTC...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CAA 72 bp ACTATCAGCCACTGCTTCCTGATATTTTCGGTGTGTTaGCTTAAGCATAAATTCCCCAACAACAATCTGTTA +
Preference number: 4 (lower is better)
Translates to: TISHCFLIFSVC*LKHKFPNNNLL
Trigger: TAACAGATTGTTGTTGGGGAATTTATGCTTAAGCAAACACACCGAAAATATCAGGAAGCAGTGGCTGATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTACTCCCTTCAGAATCTaGGGCATCTCCAACTTTAAA +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLITPFRI*GISNFK
Trigger: TTTAAAGTTGGAGATGCCTCAGATTCTGAAGGGAGT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTCATTACTCTTGCTTTaGGATAGGGTCAGGCTATCA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFSLLLL*DRVRLS
Trigger: TGATAGCCTGACCCTATCTCAAAGCAAGAGTAATGA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR TCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCCACAATTGTCACACTaGATTATTTCATCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFPQLSH*IISSAS
Trigger: GGACGCTGATGAAATAATTCAGTGTGACAATTGTGG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAGGAGTTTTCAGAAGCTaGACTCATAATAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRGVFRS*THNRVT
Trigger: AGTGACTCTATTATGAGTTCAGCTTCTGAAAACTCC...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTTGAAAATTCCATCCTaGTTAGGACACAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLLKIPS*LGHSSQ
Trigger: CTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACTCATGAAGGGTATCTaGCAAGATTTTCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRLMKGI*QDFHCL
Trigger: GAGACAATGAAAATCTTGTCAGATACCCTTCATGAG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACTCATGAAGGGTATCTaGCAAGATTTTCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPLMKGI*QDFHCL
Trigger: GAGACAATGAAAATCTTGTCAGATACCCTTCATGAG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATCTAACGTGGAGGGCTTaGACCTATTTCATTAATACC +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHLTWRA*TYFINT
Trigger: GGTATTAATGAAATAGGTTCAAGCCCTCCACGTTAG...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAAAATATCCAGAGAACTaGTGGGTTGGATTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPKYPEN*WVGFSN
Trigger: GTTGGAAAATCCAACCCATCAGTTCTCTGGATATTT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGGTATATTCAACTTCTaGCCTGTGATTCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFGIFNF*PVILPS
Trigger: ACTAGGCAGAATCACAGGGCAGAAGTTGAATATACC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAAAACTATCAGCCACTaGTTCCTGATATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRKTISH*FLIFSV
Trigger: CACCGAAAATATCAGGAAGCAGTGGCTGATAGTTTT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAAAGAATAACATATGCTaGTACAGGTCTAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPKNNIC*YRSSSV
Trigger: CACACTGCTAGACCTGTAGCAGCATATGTTATTCTT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTACAAAGCCCAGCATGTaGATCCAATTACATTACATC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLTKPSM*IQLHYI
Trigger: GATGTAATGTAATTGGATGCACATGCTGGGCTTTGT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCATTCAGCTCTTCCATaGACACAAAATCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIHSALP*TQNPEV
Trigger: CACTTCTGGATTTTGTGTCCATGGAAGAGCTGAATG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCATCTGCAGTGAGAGCTaGTTGCTTATGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFICSES*LLMFSP
Trigger: AGGAGAAAACATAAGCAACCAGCTCTCACTGCAGAT...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGCCAATAACTGTTTTTaGTCTTTCTTGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLANNCF*SFLASL
Trigger: CAAGGATGCCAAGAAAGACCAAAAACAGTTATTGGC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTCGTTTTCGTCCTCTaGTTCTCGTGTTTCTTATCG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIFVFVL*FSCFLS
Trigger: CGATAAGAAACACGAGAACCAGAGGACGAAAACGAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATTAAATCTTCAGCCTTaGGCTTCTTTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPLNLQP*ASFATQ
Trigger: CTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATAATATTCTGCTCTGCTaGAGAGTCCTTCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHNILLC*RVLLNS
Trigger: GGAATTCAGAAGGACTCTCCAGCAGAGCAGAATATT...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTACAGAAACATCTTACTaGACACAAGTGAACTCTAGC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLTETSY*TQVNSS
Trigger: GCTAGAGTTCACTTGTGTCCAGTAAGATGTTTCTGT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGATTGAAAATTCCATCCTaGTTAGGACACAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRLKIPS*LGHSSQ
Trigger: CTGTGAACTGTGTCCTAATCAGGATGGAATTTTCAA...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAACATACTTCTGCCGTTaGCTTAAAACTGGATCATTA +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPTYFCR*LKTGSL
Trigger: TAATGATCCAGTTTTAAGTCAACGGCAGAAGTATGT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAAAAGCAGGGACTTATTaGAAATTAAAGCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRKAGTY*KLKHAL
Trigger: CAGAGCGTGCTTTAATTTTCAATAAGTCCCTGCTTT...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAATATCCACCACCACTaGAAATGCAAGATGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRNIHHH*KCKMEN
Trigger: ATTTTCCATCTTGCATTTTCAGTGGTGGTGGATATT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAGGATGAGTGAATTGTaGACACAGGCTATGTTTATT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRRMSEL*TQAMFI
Trigger: AATAAACATAGCCTGTGTTCACAATTCACTCATCCT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATGTTCTTTAATAAACTaGTTTCCATCTGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPCSLIN*FPSAHA
Trigger: GGCATGAGCAGATGGAAATCAGTTTATTAAAGAACA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTAGACATTTCCATACCTaGAACATGTCTGCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIRHFHT*NMSALF
Trigger: GAACAAAGCAGACATGTTTCAGGTATGGAAATGTCT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGTAAAAAGAAGCAGCTaGTTTATTTCATCGAATGCC +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLVKRSS*FISSNA
Trigger: GGCATTCGATGAAATAAATCAGCTGCTTCTTTTTAC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAGTTCCAATCTGTTGCTaGTTTCAACTACTCGTACAA +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRVPICC*FQLLVQ
Trigger: TTGTACGAGTAGTTGAAATCAGCAACAGATTGGAAC...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAATAATTCACAAAATCTaGAGTGAGAGCTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRIIHKI*SESWLL
Trigger: AAGCAACCAGCTCTCACTGCAGATTTTGTGAATTAT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAAACTGATTTCCATCTaGTCATGCCCTTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLKLISI*SCPWKF
Trigger: AAATTTCCAAGGGCATGAGCAGATGGAAATCAGTTT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTGGGACTATAATCATCTaGTACCTAAAAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIGTIII*YLKAAM
Trigger: CATTGCAGCTTTTAGGTAGCAGATGATTATAGTCCC...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAAACCAAGAACAAGTTTaGTACACTAACACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPNQEQV*YTNTVP
Trigger: TGGAACTGTGTTAGTGTAGCAAACTTGTTCTTGGTT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCAAAACTTTATTAGCCTaGACCAGAAGCAACGAAAGA +
Preference number: 4 (lower is better)
Translates to: CNATIVTLNYFISVLTIIKTLLA*TRSNER
Trigger: TCTTTCGTTGCTTCTGGTCCAGGCTAATAAAGTTTT...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACCTTGGCACCATATTTaGAATAGTTCATTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRPWHHI*NSSFPL
Trigger: TAACGGAAATGAACTATTCCAAATATGGTGCCAAGG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAAAAGCTACACTCCTTaGCACCATATTTGGAATAGT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLKSYTP*HHIWNS
Trigger: ACTATTCCAAATATGGTGCCAAGGAGTGTAGCTTTT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAAAAGCTACACTCCTTaGCACCATATTTGGAATAGT +
Preference number: 4 (lower is better)
Translates to: LCINICQRSKRERHYLIRKSYTP*HHIWNS
Trigger: ACTATTCCAAATATGGTGCCAAGGAGTGTAGCTTTT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGCCAATAACTGTTTTTaGTCTTTCTTGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFANNCF*SFLASL
Trigger: CAAGGATGCCAAGAAAGACCAAAAACAGTTATTGGC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTAAATCTTCAGCCTTaGGCTTCTTTTGCAACACAG +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILNLQP*ASFATQ
Trigger: CTGTGTTGCAAAAGAAGCCCAAGGCTGAAGATTTAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTTAACTTTAGGTTTTTaGGTAGTGCGCCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHLTLGF*VVRQSS
Trigger: TGAACTCTGGCGCACTACCCAAAAACCTAAAGTTAA...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAAATCAAAGAACAATGTaGATGGCCAAAATAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPNQRTM*MAKIVA
Trigger: AGCCACTATTTTGGCCATCCACATTGTTCTTTGATT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATACTTAGTCGACATGTaGAACTCTCATGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPYLVDM*NSHVFV
Trigger: CACAAATACATGAGAGTTCCACATGTCGACTAAGTA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTACTAGAACTAGTATCTaGATTGTCCACTGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLITRTSI*IVHWKD
Trigger: ATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTATTCTATCCAAACCTaGCAAGCAAAAGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIYSIQT*QAKGNF
Trigger: AAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATTACATCTTATGTACCTaGACAGCAGTGAATCTTATC +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHYILCT*TAVNLI
Trigger: GATAAGATTCACTGCTGTTCAGGTACATAAGATGTA...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR TCA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATAGTCAGGTGTTTACCTaGCTATTGAGAATATGCAAA +
Preference number: 4 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHSQVFT*LLRICK
Trigger: TTTGCATATTCTCAATAGTCAGGTAAACACCTGACT...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAATAATTCACAAAATCTaGAGTGAGAGCTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRIIHKI*SESWLL
Trigger: AAGCAACCAGCTCTCACTGCAGATTTTGTGAATTAT...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAACAACTATAAAGTACTaGAGGAAGAGTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPTTIKY*RKSRCL
Trigger: AAGACATCTACTCTTCCTGCAGTACTTTATAGTTGT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTACAACTATAAAGTACTaGAGGAAGAGTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLTTIKY*RKSRCL
Trigger: AAGACATCTACTCTTCCTGCAGTACTTTATAGTTGT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACAAAAGGCAACTTTTTaGAGTGACAAGCTTATAGAA +
Preference number: 4 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPQKATF*SDKLIE
Trigger: TTCTATAAGCTTGTCACTGCAAAAAGTTGCCTTTTG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCTGCTACCTAAAAGCTaGAATGGAGTTAAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILLPKS*NGVKVV
Trigger: AACTACTTTAACTCCATTGCAGCTTTTAGGTAGCAG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCAAAACTTTATTAGCCTaGACCAGAAGCAACGAAAGA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFKTLLA*TRSNER
Trigger: TCTTTCGTTGCTTCTGGTCCAGGCTAATAAAGTTTT...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCCTTGGCACCATATTTaGAATAGTTCATTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFPWHHI*NSSFPL
Trigger: TAACGGAAATGAACTATTCCAAATATGGTGCCAAGG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTTTTTAACAAAGAATTaGACAAAACGCCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLFLTKN*TKRPAK
Trigger: CTTTGCTGGGCGTTTTGTCCAATTCTTTGTTAAAAA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAGAGAACTGATGGGTTaGATTTTCCAACTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: YILSKPDKQKATFCSDKLRELMG*IFQLFH
Trigger: ATGAAAAAGTTGGAAAATCCAACCCATCAGTTCTCT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CAA 72 bp TATGGGAAAGAGGCTTCCACTTTTATAGAGAAATATTaGCAAAGCATGCCTATCTTAGAAATCACAATCCTT +
Preference number: 4 (lower is better)
Translates to: YGKEASTFIEKY*QSMPILEITIL
Trigger: AAGGATTGTGATTTCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTCCCATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
3UTR CAA 72 bp AACTTTAGGTTTTTGGGTAGTGCGCCAGAGTTCAGATaGCTAATAATCAAAGTTCTTGATGAAGTATTAACA +
Preference number: 4 (lower is better)
Translates to: NFRFLGSAPEFR*LIIKVLDEVLT
Trigger: TGTTAATACTTCATCAAGAACTTTGATTATTAGCAATCTGAACTCTGGCGCACTACCCAAAAACCTAAAGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTATGATCTTCATCATTaGCTTCATCATTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFYDLHH*LHHSRL
Trigger: AAGACGAGAATGATGAAGGCAATGATGAAGATCATA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR GCA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTATTTTCGGTGTGTTTaGTTAAGCATAAATTCCCCA +
Preference number: 4 (lower is better)
Translates to: INICQRSKRERHYLIRQFYFRCV*LSINSP
Trigger: TGGGGAATTTATGCTTAAGCAAACACACCGAAAATA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR GCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTGAGAACCACTACTTaGTATTATGTCATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILRTTT*YYVILP
Trigger: AGGAAGAATGACATAATAGCAAGTAGTGGTTCTCAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CCA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTAATACTACCTATGAATaGTTCTTAATGTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLINTTYE*FLMWCS
Trigger: GGAACACCACATTAAGAACCATTCATAGGTAGTATT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATACGAAAGACCAGAAATaGCACAGCGCGAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYTKDQK*HSARAA
Trigger: AGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCGT...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS GCA 90 bp AAAAACTTTATTAGCCTGGACCAGAAGCAACGAAAGACCAGAAATTaGACAGCGCGAGGGCGGCTGCCTCAGACAATAGGGAAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: KNFISLDQKQRKTRN*TARGRLPQTIGKAA
Trigger: CGCTGCTTTCCCTATTGTCTGAGGCAGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCGTTGCTTCTGGTCCAGGCTAATAAAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000403050.7
ENST00000423760.6
ENST00000476009.5
ENST00000521747.5
ENST00000634607.2
CDS-3UTR CAA 90 bp GGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCTAAGAGGTTTCCGGGATaGCCTCCGAGGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GFLSLGARKIAGIFNFCPKRFPG*PPRMSC
Trigger: ACAGCTCATCCTCGGAGGCAATCCCGGAAACCTCTT...AGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521747.5
CDS TCA 90 bp CTTCACCTGCCTCCTCTTGGAGCTGCGATCCACGGTAGAGGATCGTaGCTGCAAGTTGTCCAGGTTCTTGGCGTTTTTAACAAAGAATTG +
Preference number: 5 (lower is better)
Translates to: LHLPPLGAAIHGRGS*LQVVQVLGVFNKEL
Trigger: CAATTCTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAGCTCCAAGAGGAGGCAGGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS GCA 90 bp ACCTGCCTCCTCTTGGAGCTGCGATCCACGGTAGAGGATCGTGACTaGAAGTTGTCCAGGTTCTTGGCGTTTTTAACAAAGAATTGGACA +
Preference number: 5 (lower is better)
Translates to: TCLLLELRSTVEDRD*KLSRFLAFLTKNWT
Trigger: TGTCCAATTCTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAGCTCCAAGAGGAGGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp GCTGGTTGCTTATGTTTTCTCCTTCCATCCACACTAGAACTAGTATCTGAATTGACGAAAGACCAGAAATaGCACAGCGCGAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: AGCLCFLLPSTLELVSELTKDQK*HSARAA
Trigger: AGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCGT...CAATTCAGATACTAGTTCTAGTGTGGATGGAAGGAGAAAACATAAGCAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp TCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTCACTGGTTTGCCTCCTTGATCGTTaGGTTCCATCTGGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: SESSWVLVAHPVEQISLVCLLDR*VPSGRV
Trigger: AACCCTACCAGATGGAACCAAACGATCAAGGAGGCA...AACCAGTGAAATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS TCA 90 bp TTACTCTTCTTCTTCTTGCAACCCCCTTCACTGGCAGGGCTACTATaGTCTTCATCATTGCCTTCATCATTCTCGTCTTCATCACTCCCG +
Preference number: 5 (lower is better)
Translates to: LLFFFLQPPSLAGLL*SSSLPSSFSSSSLP
Trigger: CGGGAGTGATGAAGACGAGAATGATGAAGGCAATGATGAAGATCATAGTAGCCCTGCCAGTGAAGGGGGTTGCAAGAAGAAGAAGAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403050.7
ENST00000490957.5
ENST00000634607.2
CDS-3UTR CAA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGTTCACCTGCCTCCTCTaGGAGCTGCGATCCATAAGG +
Preference number: 5 (lower is better)
Translates to: FISVLTIISQTNTANQNMFTCLL*ELRSIR
Trigger: CCTTATGGATCGCAGCTCCAAGAGGAGGCAGGTGAA...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp GGTTTTCTCTCCTTGGGTGCTCGCAAAATTGCCGGTATATTCAACTTCTGCCCTTGGGTGCTCGCAAAATaGCCGGTATATTCAACTTCT +
Preference number: 5 (lower is better)
Translates to: GFLSLGARKIAGIFNFCPWVLAK*PVYSTS
Trigger: AGAAGTTGAATATACCGGCAATTTTGCGAGCACCCA...AGGGCAGAAGTTGAATATACCGGCAATTTTGCGAGCACCCAAGGAGAGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp CCAGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTGTCTCCAGTTCCCTaGCAAGTTGCACATTCAGTT +
Preference number: 5 (lower is better)
Translates to: PVLAKRGSSQKLHSLAPYLSPVP*QVAHSV
Trigger: AACTGAATGTGCAACTTGCAAGGGAACTGGAGACAA...ATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS CCA 90 bp TGTCATCCTCACTGTCATAGTCATCCATGTCATTCAGCTCTTCCATaGACACAAAATCCAGAAGTGGTCGGTTTCGTCGAAGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: CHPHCHSHPCHSALP*TQNPEVVGFVEGSI
Trigger: AATGGAACCTTCGACGAAACCGACCACTTCTGGATTTTGTGTCCATGGAAGAGCTGAATGACATGGATGACTATGACAGTGAGGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403050.7
ENST00000490957.5
ENST00000634607.2
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTACGAAAGACCAGAAATaGCACAGCGCGAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLTKDQK*HSARAA
Trigger: AGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCGT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CAA 90 bp AACTCTTTCCTCATGTTTTTCTTCCTCAGGAACGAAGCTTCGTTTTCGTCCTCTTGCCTCCTTGATCGTTaGGTTCCATCTGGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: NSFLMFFFLRNEASFSSSCLLDR*VPSGRV
Trigger: AACCCTACCAGATGGAACCAAACGATCAAGGAGGCA...AGAGGACGAAAACGAAGCTTCGTTCCTGAGGAAGAAAAACATGAGGAAAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp AACTCTTTCCTCATGTTTTTCTTCCTCAGGAACGAAGCTTCGTTTTCGTCCTCTCTTATCGGAATCTTCTaGGGTTCTGGTGGCACATCC +
Preference number: 5 (lower is better)
Translates to: NSFLMFFFLRNEASFSSSLIGIF*GSGGTS
Trigger: GGATGTGCCACCAGAACCCAAGAAGATTCCGATAAG...AGAGGACGAAAACGAAGCTTCGTTCCTGAGGAAGAAAAACATGAGGAAAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp TTTTCGTCCTCTGGTTCTCGTGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCAACACAGACTGTCTTaGTCTTCTCTCTCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: FSSSGSRVSYRNLLGFWWQHRLS*SSLSRN
Trigger: GTTCCTAGAGAGAGAAGACAAAGACAGTCTGTGTTG...CCACCAGAACCCAAGAAGATTCCGATAAGAAACACGAGAACCAGAGGACGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATTCACCTGCCTCCTCTaGGAGCTGCGATCCATAAGG +
Preference number: 5 (lower is better)
Translates to: LCINICQRSKRERHYLIRFTCLL*ELRSIR
Trigger: CCTTATGGATCGCAGCTCCAAGAGGAGGCAGGTGAA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CAA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTTGCAGTGAGAGCTGGTaGCTTATGTTTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CFLSESSWVLVAHPVEQICSESW*LMFSPS
Trigger: GGAAGGAGAAAACATAAGCAACCAGCTCTCACTGCA...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTTCACCTGCCTCCTCTaGGAGCTGCGATCCACGGTA +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFFTCLL*ELRSTV
Trigger: TACCGTGGATCGCAGCTCCAAGAGGAGGCAGGTGAA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS CCA 90 bp AGAGCTTTGATCAATGTCTTCATTTCCGCTAAAATTAGCAGCCTCTaGACCGTTGGGAAAAGCCAATGTGCAGCATCAGCTAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: RALINVFISAKISSL*TVGKSQCAASAKIS
Trigger: AGAAATCTTAGCTGATGCTGCACATTGGCTTTTCCCAACGGTCCAGAGGCTGCTAATTTTAGCGGAAATGAAGACATTGATCAAAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489305.1
ENST00000490957.5
CDS-3UTR CAA 90 bp AGTTCTAGCAAAGCGAGGGTCTTCACAAAAGCTACACTCCTTGGCACCATATTTTTGAGAGCTCCAGTTTaGACTCTTCTCAAGAATCAG +
Preference number: 5 (lower is better)
Translates to: SSSKARVFTKATLLGTIFLRAPV*TLLKNQ
Trigger: CTGATTCTTGAGAAGAGTCAAAACTGGAGCTCTCAA...AAATATGGTGCCAAGGAGTGTAGCTTTTGTGAAGACCCTCGCTTTGCTAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTAAGAGGTTTCCGGGATaGCCTCCGAGGATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIKRFPG*PPRMSC
Trigger: ACAGCTCATCCTCGGAGGCAATCCCGGAAACCTCTT...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS GCA 90 bp ACTTTTTCAAAGGAGGATCCAAACAGCCAAAATGGTAGCAGAGTCTaGATTCATCACACCTGCAGGGTAAACAGATTTATAGGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: TFSKEDPNSQNGSRV*IHHTCRVNRFIGRC
Trigger: ACACCTACCTATAAATCTGTTTACCCTGCAGGTGTGATGAATGCAGACTCTGCTACCATTTTGGCTGTTTGGATCCTCCTTTGAAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473050.1
CDS-3UTR CAA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCTGGGTGCTCGCAAAATaGCCGGTATATTCAACTTCT +
Preference number: 5 (lower is better)
Translates to: TLELVSELSTGKISVLIPWVLAK*PVYSTS
Trigger: AGAAGTTGAATATACCGGCAATTTTGCGAGCACCCA...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATGCCTCCTTGATCGTTaGGTTCCATCTGGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPCLLDR*VPSGRV
Trigger: AACCCTACCAGATGGAACCAAACGATCAAGGAGGCA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTCTTATCGGAATCTTCTaGGGTTCTGGTGGCACATCC +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLLIGIF*GSGGTS
Trigger: GGATGTGCCACCAGAACCCAAGAAGATTCCGATAAG...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp ATCCTGATTAGGACACAGTTCACAGCTAGGAGAAACACCACATTTACAGGCATCCAGTTCCCTTGCAAGTaGCACATTCAGTTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: ILIRTQFTARRNTTFTGIQFPCK*HIQFLN
Trigger: ATTTAAGAACTGAATGTGCAACTTGCAAGGGAACTG...GATGCCTGTAAATGTGGTGTTTCTCCTAGCTGTGAACTGTGTCCTAATCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGTTGTCTCCAGTTCCCTaGCAAGTTGCACATTCAGTT +
Preference number: 5 (lower is better)
Translates to: FISVLTIISQTNTANQNMLSPVP*QVAHSV
Trigger: AACTGAATGTGCAACTTGCAAGGGAACTGGAGACAA...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS CCA 90 bp CGTGACTGCAAGTTGTCCAGGTTCTTGGCGTTTTTAACAAAGAATTaGACAAAACGCCCAGCAAAGCAAAGAAAGAATGAAGCAACAAAA +
Preference number: 5 (lower is better)
Translates to: RDCKLSRFLAFLTKN*TKRPAKQRKNEATK
Trigger: TTTTGTTGCTTCATTCTTTCTTTGCTTTGCTGGGCGTTTTGTCCAATTCTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTTTGGCTCGCTGACTaGTTCCTCTGTAGCGGTTGT +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIFWLAD*FLCSGC
Trigger: ACAACCGCTACAGAGGAACAAGTCAGCGAGCCAAAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CAA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAAGGGTCAGGCTATCATaGGTCAGTTCCTCATCATCA +
Preference number: 5 (lower is better)
Translates to: LCINICQRSKRERHYLIRRVRLS*VSSSSS
Trigger: TGATGATGAGGAACTGACCAATGATAGCCTGACCCT...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CAA 90 bp TGTTTCTTATCGGAATCTTCTTGGGTTCTGGTGGCACATCCTGTGGAACAAATTGTTACTGGTCGTAATTaGTCAATATCTCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: CFLSESSWVLVAHPVEQIVTGRN*SISPKA
Trigger: AGCCTTTGGAGATATTGACAAATTACGACCAGTAAC...AATTTGTTCCACAGGATGTGCCACCAGAACCCAAGAAGATTCCGATAAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATGCAGTGAGAGCTGGTaGCTTATGTTTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPCSESW*LMFSPS
Trigger: GGAAGGAGAAAACATAAGCAACCAGCTCTCACTGCA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCTGCAGTGAGAGCTGGTaGCTTATGTTTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CNATIVTLNYFISVLTIICSESW*LMFSPS
Trigger: GGAAGGAGAAAACATAAGCAACCAGCTCTCACTGCA...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGATGCCTCCTTGATCGTTaGGTTCCATCTGGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRCLLDR*VPSGRV
Trigger: AACCCTACCAGATGGAACCAAACGATCAAGGAGGCA...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCTTATCGGAATCTTCTaGGGTTCTGGTGGCACATCC +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILIGIF*GSGGTS
Trigger: GGATGTGCCACCAGAACCCAAGAAGATTCCGATAAG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp ATCAACTCCATAACAACCTTCATGGACTGTAATGCCACAATTGTCACACTGAATCAACACAGACTGTCTTaGTCTTCTCTCTCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: INSITTFMDCNATIVTLNQHRLS*SSLSRN
Trigger: GTTCCTAGAGAGAGAAGACAAAGACAGTCTGTGTTG...ATTCAGTGTGACAATTGTGGCATTACAGTCCATGAAGGTTGTTATGGAGTTGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTTACTCTTCTTCTTCTaGCAACCCCCTTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFLLFFF*QPPSLA
Trigger: TGCCAGTGAAGGGGGTTGCAAGAAGAAGAAGAGTAA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403050.7
CDS-3UTR CAA 90 bp GTTAGTGTTACTGGTCGTAATTTGTCAATATCTCCAAAGGCTACTCCAGGAACAGTTACTGGTCGTAATTaGTCAATATCTCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: VSVTGRNLSISPKATPGTVTGRN*SISPKA
Trigger: AGCCTTTGGAGATATTGACAAATTACGACCAGTAAC...TGTTCCTGGAGTAGCCTTTGGAGATATTGACAAATTACGACCAGTAACACTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCTGCAGTGAGAGCTGGTaGCTTATGTTTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFCSESW*LMFSPS
Trigger: GGAAGGAGAAAACATAAGCAACCAGCTCTCACTGCA...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTGGGTGCTCGCAAAATaGCCGGTATATTCAACTTCT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLWVLAK*PVYSTS
Trigger: AGAAGTTGAATATACCGGCAATTTTGCGAGCACCCA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCACAACACAGACTGTCTTaGTCTTCTCTCTCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPQHRLS*SSLSRN
Trigger: GTTCCTAGAGAGAGAAGACAAAGACAGTCTGTGTTG...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCCAGTTCCCTTGCAAGTaGCACATTCAGTTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: TLELVSELSTGKISVLIPQFPCK*HIQFLN
Trigger: ATTTAAGAACTGAATGTGCAACTTGCAAGGGAACTG...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGATTGTCTCCAGTTCCCTaGCAAGTTGCACATTCAGTT +
Preference number: 5 (lower is better)
Translates to: LCINICQRSKRERHYLIRLSPVP*QVAHSV
Trigger: AACTGAATGTGCAACTTGCAAGGGAACTGGAGACAA...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCATTGTCTCCAGTTCCCTaGCAAGTTGCACATTCAGTT +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPLSPVP*QVAHSV
Trigger: AACTGAATGTGCAACTTGCAAGGGAACTGGAGACAA...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACTTAACTTTAGGTTTTaGGGTAGTGCGCCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: LCINICQRSKRERHYLIRLNFRF*GSAPEF
Trigger: GAACTCTGGCGCACTACCCAAAAACCTAAAGTTAAG...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGATTTCAGGGTCCTCACTaGCCTGAAAACTATCAGCCA +
Preference number: 5 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRFQGPH*PENYQP
Trigger: TGGCTGATAGTTTTCAGGCAAGTGAGGACCCTGAAA...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TGTAATGCCACAATTGTCACACTGAATTATTTCATCAGCGTCCTCACTATTATCTTGAGAGCTCCAGTTTaGACTCTTCTCAAGAATCAG +
Preference number: 5 (lower is better)
Translates to: CNATIVTLNYFISVLTIILRAPV*TLLKNQ
Trigger: CTGATTCTTGAGAAGAGTCAAAACTGGAGCTCTCAA...GATAATAGTGAGGACGCTGATGAAATAATTCAGTGTGACAATTGTGGCATTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTTGAGAGCTCCAGTTTaGACTCTTCTCAAGAATCAG +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLLRAPV*TLLKNQ
Trigger: CTGATTCTTGAGAAGAGTCAAAACTGGAGCTCTCAA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCATCAGCGTCCTCACTATTATCTCCCAGACAAACACAGCAAATCAGAATATGAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: FISVLTIISQTNTANQNMNMVHF*RAPVLT
Trigger: AGTCAAAACTGGAGCTCTCAAAAAATGGACCATATT...CATATTCTGATTTGCTGTGTTTGTCTGGGAGATAATAGTGAGGACGCTGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp ACACTAGAACTAGTATCTGAATTGTCCACTGGAAAGATATCTGTACTGATCCCCAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: TLELVSELSTGKISVLIPNMVHF*RAPVLT
Trigger: AGTCAAAACTGGAGCTCTCAAAAAATGGACCATATT...GGGGATCAGTACAGATATCTTTCCAGTGGACAATTCAGATACTAGTTCTAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp ATATCTGTACTGATCCCCATGAGTTCTGCTTTCCGCATAAGTTTACGAATAGCTGAACTAGTATCTGAATaGTCCACTGGAAAGATATCT +
Preference number: 5 (lower is better)
Translates to: ISVLIPMSSAFRISLRIAELVSE*STGKIS
Trigger: AGATATCTTTCCAGTGGACAATTCAGATACTAGTTC...AGCTATTCGTAAACTTATGCGGAAAGCAGAACTCATGGGGATCAGTACAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423760.6
ENST00000521747.5
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCCAACACAGACTGTCTTaGTCTTCTCTCTCTAGGAAC +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFQHRLS*SSLSRN
Trigger: GTTCCTAGAGAGAGAAGACAAAGACAGTCTGTGTTG...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGGCAAATCTACTGCCTaGTTAGTCCAAGTAACAAAC +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLGKSTA*LVQVTN
Trigger: GTTTGTTACTTGGACTAACAAGGCAGTAGATTTGCC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGGCAAATCTACTGCCTaGTTAGTCCAAGTAACAAAC +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPGKSTA*LVQVTN
Trigger: GTTTGTTACTTGGACTAACAAGGCAGTAGATTTGCC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTTGAGAGCTCCAGTTTaGACTCTTCTCAAGAATCAG +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLILRAPV*TLLKNQ
Trigger: CTGATTCTTGAGAAGAGTCAAAACTGGAGCTCTCAA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGTTACTGGTCGTAATTaGTCAATATCTCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLVTGRN*SISPKA
Trigger: AGCCTTTGGAGATATTGACAAATTACGACCAGTAAC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTCAGTTCCCTTGCAAGTaGCACATTCAGTTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLQFPCK*HIQFLN
Trigger: ATTTAAGAACTGAATGTGCAACTTGCAAGGGAACTG...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTTCCAATGCACAACGTTaGAGAACCACTACTTGCTAT +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLISNAQR*RTTTCY
Trigger: ATAGCAAGTAGTGGTTCTCAAACGTTGTGCATTGGA...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp CTGTGTATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGAGCATCAGCTGGGAACTaGTTAGAAATGCAAATTTTC +
Preference number: 5 (lower is better)
Translates to: LCINICQRSKRERHYLIRASAGN*LEMQIF
Trigger: GAAAATTTGCATTTCTAACAAGTTCCCAGCTGATGC...TCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGATACACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGATTTCAGAAGCAGTCATaGACCCACAAAAGTATAGGG +
Preference number: 5 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRFQKQS*THKSIG
Trigger: CCCTATACTTTTGTGGGTCAATGACTGCTTCTGAAA...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCACAGTTCCAATCTGTaGCTGATTTCAACTACTCGT +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIHSSNL*LISTTR
Trigger: ACGAGTAGTTGAAATCAGCAACAGATTGGAACTGTG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPNMVHF*RAPVLT
Trigger: AGTCAAAACTGGAGCTCTCAAAAAATGGACCATATT...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGTTACTGGTCGTAATTaGTCAATATCTCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFVTGRN*SISPKA
Trigger: AGCCTTTGGAGATATTGACAAATTACGACCAGTAAC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTGAACTAGTATCTGAATaGTCCACTGGAAAGATATCT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLELVSE*STGKIS
Trigger: AGATATCTTTCCAGTGGACAATTCAGATACTAGTTC...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp TTCTTTCAGCTGGTAGGTTGTATAGTCAATAATCTTTGTACTTCCCTCCTTATTCAGTTCCCTTGCAAGTaGCACATTCAGTTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: FFQLVGCIVNNLCTSLLIQFPCK*HIQFLN
Trigger: ATTTAAGAACTGAATGTGCAACTTGCAAGGGAACTG...AATAAGGAGGGAAGTACAAAGATTATTGACTATACAACCTACCAGCTGAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGAGCGCCAGAGTTCAGATaGCTAATAATCAAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRAPEFR*LIIKVL
Trigger: AAGAACTTTGATTATTAGCAATCTGAACTCTGGCGC...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTATATTTTCGGTGTGTTaGCTTAAGCATAAATTCCCC +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLIFSVC*LKHKFP
Trigger: GGGGAATTTATGCTTAAGCAAACACACCGAAAATAT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTAAAAGCAGGGACTTATaGAAAATTAAAGCACGCTCT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLKSRDL*KIKARS
Trigger: AGAGCGTGCTTTAATTTTCAATAAGTCCCTGCTTTT...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp AGCATATTGTATTTATTAAGTCCCACAGGCTTCAGTAACTCTTCAGTAAGTCCAGTTTTTAACAAAGAATaGGACAAAACGCCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SILYLLSPTGFSNSSVSPVFNKE*DKTPSK
Trigger: TTTGCTGGGCGTTTTGTCCAATTCTTTGTTAAAAAC...TGGACTTACTGAAGAGTTACTGAAGCCTGTGGGACTTAATAAATACAATATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTTCAGGAAACTCCAAGTaGAGTCTCTTAAACAAGTTT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLSGNSK*SLLNKF
Trigger: AAACTTGTTTAAGAGACTCAACTTGGAGTTTCCTGA...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp GAAAGAGGCTTCCACTTTTATAGAGAAATATTTGCAAAGCATGCCTATCTTAGACAGAGAACTGATGGGTaGGATTTTCCAACTTTTTCA +
Preference number: 5 (lower is better)
Translates to: ERGFHFYREIFAKHAYLRQRTDG*DFPTFS
Trigger: TGAAAAAGTTGGAAAATCCAACCCATCAGTTCTCTG...TCTAAGATAGGCATGCTTTGCAAATATTTCTCTATAAAAGTGGAAGCCTCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp TATATTCTATCCAAACCTGACAAGCAAAAGGCAACTTTTTGCAGTGACAAGCTTCAAAGGAAAAAGAATTaGCTTGTCAGAATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: YILSKPDKQKATFCSDKLQRKKN*LVRIRG
Trigger: ACCCCTAATTCTGACAAGCAAATTCTTTTTCCTTTG...AAGCTTGTCACTGCAAAAAGTTGCCTTTTGCTTGTCAGGTTTGGATAGAATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFNMVHF*RAPVLT
Trigger: AGTCAAAACTGGAGCTCTCAAAAAATGGACCATATT...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp ATCAACATTTGCCAAAGAAGCAAGAGGGAAAGACATTACTTAATACGACAATTCGAACTAGTATCTGAATaGTCCACTGGAAAGATATCT +
Preference number: 5 (lower is better)
Translates to: INICQRSKRERHYLIRQFELVSE*STGKIS
Trigger: AGATATCTTTCCAGTGGACAATTCAGATACTAGTTC...GAATTGTCGTATTAAGTAATGTCTTTCCCTCTTGCTTCTTTGGCAAATGTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403050.7
ENST00000642461.1
CDS-3UTR CAA 90 bp AAATACACAATAAGGTCAAGCAACTCTTCACAGCATGAGAGAAGAATTAGACATGGAAAAAGAATTTGCTaGTCAGAATTAGGGGTGATA +
Preference number: 5 (lower is better)
Translates to: KYTIRSSNSSQHERRIRHGKRIC*SELGVI
Trigger: TATCACCCCTAATTCTGACAAGCAAATTCTTTTTCC...ATGTCTAATTCTTCTCTCATGCTGTGAAGAGTTGCTTGACCTTATTGTGTATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS CAA 90 bp AGAGCTTCCAGCAGAGAAGCTGCCAAAGGCTTCACCTGCCTCCTCTaGGAGCTGCGATCCACGGTAGAGGATCGTGACTGCAAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: RASSREAAKGFTCLL*ELRSTVEDRDCKLS
Trigger: GGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS GCA 72 bp AGAGCTTCCAGCAGAGAAGCTGCCAAAGGCTTCACCTaGCTCCTCTTGGAGCTGCGATCCACGGTAGAGGAT +
Preference number: 6 (lower is better)
Translates to: RASSREAAKGFT*LLLELRSTVED
Trigger: ATCCTCTACCGTGGATCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS GCA 72 bp ATTAGCCTGGACCAGAAGCAACGAAAGACCAGAAATTaGACAGCGCGAGGGCGGCTGCCTCAGACAATAGGG +
Preference number: 6 (lower is better)
Translates to: ISLDQKQRKTRN*TARGRLPQTIG
Trigger: CCCTATTGTCTGAGGCAGCCGCCCTCGCGCTGTGCAATTTCTGGTCTTTCGTTGCTTCTGGTCCAGGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403050.7
ENST00000423760.6
ENST00000476009.5
ENST00000490957.5
ENST00000521747.5
ENST00000634607.2
CDS GCA 72 bp AGAGCTTCCAGCAGAGAAGCTGCCAAAGGCTTCACCTaGCTCCTCTTGGAGCTGCGATCCATAAGGAATCCG +
Preference number: 6 (lower is better)
Translates to: RASSREAAKGFT*LLLELRSIRNP
Trigger: CGGATTCCTTATGGATCGCAGCTCCAAGAGGAGGCAGGTGAAGCCTTTGGCAGCTTCTCTGCTGGAAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403050.7
ENST00000423760.6
ENST00000476009.5
ENST00000490957.5
ENST00000521747.5
ENST00000634607.2
CDS CCA 72 bp CCTCTTGGAGCTGCGATCCATAAGGAATCCGTGAGGTaGTCGTTTGGAGAAGACTTAGGGAGAGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PLGAAIHKESVR*SFGEDLGRGCR
Trigger: CCTGCAGCCTCTCCCTAAGTCTTCTCCAAACGACCACCTCACGGATTCCTTATGGATCGCAGCTCCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403050.7
ENST00000423760.6
ENST00000476009.5
ENST00000490957.5
ENST00000521747.5
ENST00000634607.2
CDS TCA 72 bp CCTCCTCTTGGAGCTGCGATCCACGGTAGAGGATCGTaGCTGCAAGTTGTCCAGGTTCTTGGCGTTTTTAAC +
Preference number: 6 (lower is better)
Translates to: PPLGAAIHGRGS*LQVVQVLGVFN
Trigger: GTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAGCTCCAAGAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS GCA 72 bp CTCTTGGAGCTGCGATCCACGGTAGAGGATCGTGACTaGAAGTTGTCCAGGTTCTTGGCGTTTTTAACAAAG +
Preference number: 6 (lower is better)
Translates to: LLELRSTVEDRD*KLSRFLAFLTK
Trigger: CTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAGCTCCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS CAA 90 bp CTCCTCTTGGAGCTGCGATCCACGGTAGAGGATCGTGACTGCAAGTaGTCCAGGTTCTTGGCGTTTTTAACAAAGAATTGGACAAAACGC +
Preference number: 6 (lower is better)
Translates to: LLLELRSTVEDRDCK*SRFLAFLTKNWTKR
Trigger: GCGTTTTGTCCAATTCTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAGCTCCAAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS CAA 90 bp CTGCGATCCACGGTAGAGGATCGTGACTGCAAGTTGTCCAGGTTCTaGGCGTTTTTAACAAAGAATTGGACAAAACGCCCAGCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: LRSTVEDRDCKLSRF*AFLTKNWTKRPAKQ
Trigger: TTGCTTTGCTGGGCGTTTTGTCCAATTCTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGTGGATCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS CCA 72 bp ATCAATGTCTTCATTTCCGCTAAAATTAGCAGCCTCTaGACCGTTGGGAAAAGCCAATGTGCAGCATCAGCT +
Preference number: 6 (lower is better)
Translates to: INVFISAKISSL*TVGKSQCAASA
Trigger: AGCTGATGCTGCACATTGGCTTTTCCCAACGGTCCAGAGGCTGCTAATTTTAGCGGAAATGAAGACATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489305.1
ENST00000490957.5
CDS CAA 72 bp ACGGTAGAGGATCGTGACTGCAAGTTGTCCAGGTTCTaGGCGTTTTTAACAAAGAATTGGACAAAACGCCCA +
Preference number: 6 (lower is better)
Translates to: TVEDRDCKLSRF*AFLTKNWTKRP
Trigger: TGGGCGTTTTGTCCAATTCTTTGTTAAAAACGCCAAGAACCTGGACAACTTGCAGTCACGATCCTCTACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642461.1
CDS TCA 72 bp TTCAGAATCACTACAGGAACCTTCTCCACTGTCCTTTaGAGCATCTTCACTTCCATTACCACTCCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: FRITTGTFSTVL*SIFTSITTPFR
Trigger: TCTGAAGGGAGTGGTAATGGAAGTGAAGATGCTTCAAAGGACAGTGGAGAAGGTTCCTGTAGTGATTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403050.7
ENST00000490957.5
ENST00000634607.2
CDS TCA 72 bp TTCTCAAGAATCAGCGAGTCCTCATTACTCTTGCTTTaGGATAGGGTCAGGCTATCATTGGTCAGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: FSRISESSLLLL*DRVRLSLVSSS
Trigger: TGAGGAACTGACCAATGATAGCCTGACCCTATCTCAAAGCAAGAGTAATGAGGACTCGCTGATTCTTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403050.7
ENST00000490957.5
ENST00000634607.2
CDS CAA 72 bp TCTTCATTTCCGCTAAAATTAGCAGCCTCTGGACCGTaGGGAAAAGCCAATGTGCAGCATCAGCTAAGATTT +
Preference number: 6 (lower is better)
Translates to: SSFPLKLAASGP*GKANVQHQLRF
Trigger: AAATCTTAGCTGATGCTGCACATTGGCTTTTCCCAACGGTCCAGAGGCTGCTAATTTTAGCGGAAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489305.1
ENST00000490957.5
CDS CAA 90 bp ATTATCTCCCAGACAAACACAGCAAATCAGAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACTCTTCTCAAGAATCAGCGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: IISQTNTANQNMVHF*RAPVLTLLKNQRVL
Trigger: GAGGACTCGCTGATTCTTGAGAAGAGTCAAAACTGGAGCTCTCAAAAAATGGACCATATTCTGATTTGCTGTGTTTGTCTGGGAGATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403050.7
ENST00000490957.5
ENST00000634607.2
CDS CAA 90 bp ATTATCTCCCAGACAAACACAGCAAATCAGAATATGGTCCATTTTTaGAGAGCTCCAGTTTTGACTCTTCTCAAGAATCAGCGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: IISQTNTANQNMVHF*RAPVLTLLKNQRVL
Trigger: CAGGACTCGCTGATTCTTGAGAAGAGTCAAAACTGGAGCTCTCAAAAAATGGACCATATTCTGATTTGCTGTGTTTGTCTGGGAGATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423760.6
ENST00000476009.5
ENST00000521747.5
ENST00000642461.1