RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112511, ENSG00000225553, ENSG00000239756

Ensembl transcript IDs: ENST00000374512.7, ENST00000374516.8, ENST00000418028.1, ENST00000419154.5, ENST00000421466.5, ENST00000427004.5, ENST00000427826.1, ENST00000427869.6, ENST00000428274.5, ENST00000441437.1, ENST00000442136.1, ENST00000447305.5, ENST00000454914.6, ENST00000459809.5, ENST00000465760.5, ENST00000475137.5, ENST00000479029.1, ENST00000482971.1, ENST00000487460.5, ENST00000487667.5, ENST00000488767.1, ENST00000495185.5, ENST00000495509.6, ENST00000496666.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGAACATCCGGATGGGGTaGCCTGGGCAGGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: QSHQAVLSEQGPGQGPLGNIRMG*PGQAAG
Trigger: GCCCGCTGCCTGCCCAGGTCACCCCATCCGGATGTT...CCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427826.1
3UTR-3UTR CCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCGGATGGGGCTGCTaGGCAGGCAGCGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDSGWGC*AGSGHL
Trigger: CAGATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGA...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495509.6
3UTR-3UTR GCA 90 bp GAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGAACATCCGGATGGGGCTaGTGGGCAGGCAGCGGGCAT +
Preference number: 2 (lower is better)
Translates to: EQGPGQGPLGTGNQPHLGTSGWG*WAGSGH
Trigger: ATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGATGT...TCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495509.6
3UTR-3UTR CCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
3UTR-3UTR GCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
3UTR-3UTR CCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 2 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
3UTR-3UTR CCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCAAGCAAACATCCGGATaGGGTGACCTGGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSKQTSG*GDLGRQ
Trigger: CTGCCTGCCCAGGTCACCCCATCCGGATGTTTGCTT...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427826.1
3UTR-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
3UTR-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACGAGGCAGTCATCGAGTaGGGGGCACTTTTAGGGATG +
Preference number: 2 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNEAVIE*GALLGM
Trigger: CATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTC...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
3UTR-3UTR CCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTGAGGCAGTCATCGAGTaGGGGGCACTTTTAGGGATG +
Preference number: 2 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPEAVIE*GALLGM
Trigger: CATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTC...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427826.1
3UTR-3UTR GCA 90 bp GACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTGGGCACTCAACCAGGTACTaGACAGAGCCATCAGGCCGT +
Preference number: 2 (lower is better)
Translates to: DKLRHRGEGGAERLGRPGHSTRY*TEPSGR
Trigger: ACGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTG...CCCAGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
3UTR-3UTR GCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTACACTCAACCAGGTACTaGACAGAGCCATCAGGCCGT +
Preference number: 2 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLHSTRY*TEPSGR
Trigger: ACGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTG...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
3UTR-3UTR GCA 90 bp TCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGGCAGCAGGGCCATAGAACCAGAAACTaGGAATCATCCTCAAACTGG +
Preference number: 2 (lower is better)
Translates to: SQSDRHNRGVPLQGGQQGHRTRN*ESSSNW
Trigger: CCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATG...GCCCTGCTGCCCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
3UTR CCA 72 bp CCGGATGGGGTGACCTGGGCAGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAAC +
Preference number: 3 (lower is better)
Translates to: PDGVTWAGSGHL*AGSCSRCCPGN
Trigger: GTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCAGGTCACCCCATCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427826.1
3UTR CCA 72 bp TCCGGATGGGGCTGCTGGGCAGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAAC +
Preference number: 3 (lower is better)
Translates to: SGWGCWAGSGHL*AGSCSRCCPGN
Trigger: GTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
3UTR CCA 72 bp CTGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTaGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: LSPEVPAVLAEG*KEANIRMGLLG
Trigger: GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
3UTR GCA 72 bp TGTCTGGGGGTCCACTGTCCCCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGA +
Preference number: 3 (lower is better)
Translates to: CLGVHCPQRSLR*WQKGGRKQTSG
Trigger: TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACAGTGGACCCCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTCCTCCTCAGGGGCTCTaGCTCCGGCCTCCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGPPQGL*LRPPAL
Trigger: AAGCGCCGGAGGCCGGAGCCAGAGCCCCTGAGGAGG...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACCCTCCCCCAGGGCCCTaGCCTGGTGAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDPPPGP*PGECSI
Trigger: GATGGAGCACTCACCAGGGCAGGGCCCTGGGGGAGG...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGCCTCCTCAGGGGCTCTaGCTCCGGCCTCCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRPPQGL*LRPPAL
Trigger: AAGCGCCGGAGGCCGGAGCCAGAGCCCCTGAGGAGG...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCCTCCTCAGGGGCTCTaGCTCCGGCCTCCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNPPQGL*LRPPAL
Trigger: AAGCGCCGGAGGCCGGAGCCAGAGCCCCTGAGGAGG...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTTCCGGATGGGGCTGCTaGGCAGGCAGCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGSGWGC*AGSGHL
Trigger: CAGATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGA...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCTCCGGATGGGGCTGCTaGGCAGGCAGCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSSGWGC*AGSGHL
Trigger: CAGATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGA...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCCTGATTGCGCACTGCTaGGGGTGGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSLIAHC*GWPQLL
Trigger: GAGGAGCTGGGGCCACCCTCAGCAGTGCGCAATCAG...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTACTGATTGCGCACTGCTaGGGGTGGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVLIAHC*GWPQLL
Trigger: GAGGAGCTGGGGCCACCCTCAGCAGTGCGCAATCAG...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495509.6
CDS-3UTR TCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACAACATCCGGATGGGGTaGCCTGGGCAGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNNIRMG*PGQAAG
Trigger: GCCCGCTGCCTGCCCAGGTCACCCCATCCGGATGTT...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427826.1
CDS-3UTR GCA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCGGGGCTCGGGCTGATTaGGCACTGCTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPGARAD*ALLRVA
Trigger: GGCCACCCTCAGCAGTGCGCAATCAGCCCGAGCCCC...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACGGGGCTCGGGCTGATTaGGCACTGCTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDGARAD*ALLRVA
Trigger: GGCCACCCTCAGCAGTGCGCAATCAGCCCGAGCCCC...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCGGGGCTCGGGCTGATTaGGCACTGCTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTGARAD*ALLRVA
Trigger: GGCCACCCTCAGCAGTGCGCAATCAGCCCGAGCCCC...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACCCTCCCCCAGGGCCCTaGCCTGGTGAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDPPPGP*PGECSI
Trigger: GATGGAGCACTCACCAGGGCAGGGCCCTGGGGGAGG...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACCTCCCCCAGGGCCCTaGCCTGGTGAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGPPPGP*PGECSI
Trigger: GATGGAGCACTCACCAGGGCAGGGCCCTGGGGGAGG...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp GAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACCCAAAGCCGAGGCCTaGGGCCAGAGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EQGPGQGPLGTGNQPHLGPKAEA*GQRWEQ
Trigger: CTGCTCCCACCTCTGGCCCCAGGCCTCGGCTTTGGG...TCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGCCCAAAGCCGAGGCCTaGGGCCAGAGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRPKAEA*GQRWEQ
Trigger: CTGCTCCCACCTCTGGCCCCAGGCCTCGGCTTTGGG...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCCTCCTCAGGGGCTCTaGCTCCGGCCTCCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPPPQGL*LRPPAL
Trigger: AAGCGCCGGAGGCCGGAGCCAGAGCCCCTGAGGAGG...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCTCCGGATGGGGCTGCTaGGCAGGCAGCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTSGWGC*AGSGHL
Trigger: CAGATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGA...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCTCCTGGGGCTCGGGCTaGTTGCGCACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLSWGSG*LRTAEG
Trigger: ACCCTCAGCAGTGCGCAATCAGCCCGAGCCCCAGGA...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACTCCTGGGGCTCGGGCTaGTTGCGCACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNSWGSG*LRTAEG
Trigger: ACCCTCAGCAGTGCGCAATCAGCCCGAGCCCCAGGA...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAGTGCCCTCTGCAGATaGGCCCGCTCCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTSALCR*ARSLCS
Trigger: GGAGCAGAGGGAGCGGGCTCATCTGCAGAGGGCACT...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGAAGTGCCCTCTGCAGATaGGCCCGCTCCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGSALCR*ARSLCS
Trigger: GGAGCAGAGGGAGCGGGCTCATCTGCAGAGGGCACT...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp CAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGGGATGGTGGAGACACTaGGGCCTGCAGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QSHQAVLSEQGPGQGPLGGWWRH*GLQCPL
Trigger: CAGAGGGCACTGCAGGCCTCAGTGTCTCCACCATCC...CCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000475137.5
CDS-3UTR GCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACACATCCGGATGGGGCTaGTGGGCAGGCAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDTSGWG*WAGSGH
Trigger: ATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGATGT...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCACATCCGGATGGGGCTaGTGGGCAGGCAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTTSGWG*WAGSGH
Trigger: ATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGATGT...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACGCTTCATACCCAGCATaGCCCGGGCATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDASYPA*PGHRGP
Trigger: AGGGCCCCTATGCCCGGGCCATGCTGGGTATGAAGC...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAGCTTCATACCCAGCATaGCCCGGGCATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVASYPA*PGHRGP
Trigger: AGGGCCCCTATGCCCGGGCCATGCTGGGTATGAAGC...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427826.1
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGAGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000475137.5
CDS-3UTR CCA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGTGGCCCTCCGCGGCTTaGGGAGCGAAGAGTCGGACC +
Preference number: 4 (lower is better)
Translates to: AAGICGPEVVAAAALVTLWPSAA*GAKSRT
Trigger: GGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCA...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTCCTGAGATTCGCCCTTaGGGCACGAGGGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGPEIRP*GTRESP
Trigger: GGGGGATTCCCTCGTGCCCCAAGGGCGAATCTCAGG...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR TCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSDTSHS*PAGSQG
Trigger: TCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCTGATTGCGCACTGCTaGGGGTGGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPLIAHC*GWPQLL
Trigger: GAGGAGCTGGGGCCACCCTCAGCAGTGCGCAATCAG...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp ACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCTCCTGGGGCTCGGGCTaGTTGCGCACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TAQSHQAVLSEQGPGQGPSWGSG*LRTAEG
Trigger: ACCCTCAGCAGTGCGCAATCAGCCCGAGCCCCAGGA...GGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp ACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCAGTGCCCTCTGCAGATaGGCCCGCTCCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAQSHQAVLSEQGPGQGPSALCR*ARSLCS
Trigger: GGAGCAGAGGGAGCGGGCTCATCTGCAGAGGGCACT...GGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACGGATGGTGGAGACACTaGGGCCTGCAGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNGWWRH*GLQCPL
Trigger: CAGAGGGCACTGCAGGCCTCAGTGTCTCCACCATCC...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427826.1
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGGTGAAGTTCCAGGGGTaGCCTGTCTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: QSHQAVLSEQGPGQGPLGVKFQG*PVWGST
Trigger: AGTGGACCCCCAGACAGGTCACCCCTGGAACTTCAC...CCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAGTGAAGTTCCAGGGGTaGCCTGTCTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVVKFQG*PVWGST
Trigger: AGTGGACCCCCAGACAGGTCACCCCTGGAACTTCAC...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCGTGAAGTTCCAGGGGTaGCCTGTCTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSVKFQG*PVWGST
Trigger: AGTGGACCCCCAGACAGGTCACCCCTGGAACTTCAC...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGAGGCATACCCAGGATGTaGCCTCTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EQGPGQGPLGTGNQPHLGGIPRM*PLPLQG
Trigger: CCCCTGGAGAGGGAGAGGGCACATCCTGGGTATGCC...TCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCGGCATACCCAGGATGTaGCCTCTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLGIPRM*PLPLQG
Trigger: CCCCTGGAGAGGGAGAGGGCACATCCTGGGTATGCC...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRASWNH*RQLRHC
Trigger: GCAGTGCCGGAGCTGCCTGCAGTGGTTCCATGAGGC...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR GCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLASWNH*RQLRHC
Trigger: GCAGTGCCGGAGCTGCCTGCAGTGGTTCCATGAGGC...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp GGTACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTGGGGCTCGGGCTGATTaGGCACTGCTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GTAQSHQAVLSEQGPGQGGARAD*ALLRVA
Trigger: GGCCACCCTCAGCAGTGCGCAATCAGCCCGAGCCCC...ACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCACATCCGGATGGGGCTaGTGGGCAGGCAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGTSGWG*WAGSGH
Trigger: ATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGATGT...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACCCCTGCCCTGGTGAGTaGTCCATCTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDPCPGE*SISSRG
Trigger: CCCCCTACTGGAGATGGAGCACTCACCAGGGCAGGG...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCATGGGGCTGCTGCAGTaGCCTCTGCAGATGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLMGLLQ*PLQMSP
Trigger: CGGGCTCATCTGCAGAGGGCACTGCAGCAGCCCCAT...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR GCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCATGGGGCTGCTGCAGTaGCCTCTGCAGATGAGCCCG +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTMGLLQ*PLQMSP
Trigger: CGGGCTCATCTGCAGAGGGCACTGCAGCAGCCCCAT...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGACCCAAAGCCGAGGCCTaGGGCCAGAGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGPKAEA*GQRWEQ
Trigger: CTGCTCCCACCTCTGGCCCCAGGCCTCGGCTTTGGG...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACCAGGGGCTGGAGCCCTaGGAACATGGCAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDQGLEP*EHGSPG
Trigger: ACCAGGACTGCCATGTTCCCAGGGCTCCAGCCCCTG...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACTCCCTCTCCAGGGGCTaGAGCCCTGGGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNSLSRG*SPGNMA
Trigger: TGCCATGTTCCCAGGGCTCCAGCCCCTGGAGAGGGA...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCGGGCACCTCCCCTCTTaGTGGCGATCGCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSGHLPS*WRSQRH
Trigger: GTGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCC...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCGCTTCATACCCAGCATaGCCCGGGCATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPASYPA*PGHRGP
Trigger: AGGGCCCCTATGCCCGGGCCATGCTGGGTATGAAGC...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp CAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QSHQAVLSEQGPGQGPLGRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...CCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGTGGCCCTCCGCGGCTTaGGGAGCGAAGAGTCGGACC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRWPSAA*GAKSRT
Trigger: GGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCA...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGACGCCGAAGAAGAGGCTaGCCCTCCGCGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGRRRRG*PSAAWG
Trigger: TCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCG...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR TCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGAGCTGGGTCCCAAAGTaGGGAGGCACCAGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGSWVPK*GGTRAA
Trigger: AGCCGCTCTGGTGCCTCCTCACTTTGGGACCCAGCT...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCAGCTGGGTCCCAAAGTaGGGAGGCACCAGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGSWVPK*GGTRAA
Trigger: AGCCGCTCTGGTGCCTCCTCACTTTGGGACCCAGCT...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGAGCTGGGTCCCAAAGTaGGGAGGCACCAGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: AAGICGPEVVAAAALVTLSWVPK*GGTRAA
Trigger: AGCCGCTCTGGTGCCTCCTCACTTTGGGACCCAGCT...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGLASTS*PSQSRG
Trigger: GCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAG...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTDTSHS*PAGSQG
Trigger: TCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp CAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGTCCTTTGGGGGTGTCTaGAAGCTCCCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QSHQAVLSEQGPGQGPLGSFGGV*KLPQEQ
Trigger: TTGCTCCTGGGGGAGCTTTCAGACACCCCCAAAGGA...CCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCCTGGGGCTCGGGCTaGTTGCGCACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGSWGSG*LRTAEG
Trigger: ACCCTCAGCAGTGCGCAATCAGCCCGAGCCCCAGGA...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
CDS-3UTR TCA 90 bp ACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCGGATGGTGGAGACACTaGGGCCTGCAGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TAQSHQAVLSEQGPGQGPGWWRH*GLQCPL
Trigger: CAGAGGGCACTGCAGGCCTCAGTGTCTCCACCATCC...GGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000475137.5
CDS-3UTR TCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCCCCTTCCTCCGACCTaGGATTCGCCCTTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLPLPPT*DSPLGH
Trigger: GTGCCCCAAGGGCGAATCTCAGGTCGGAGGAAGGGG...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR TCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCTCTGGTTAGGGTGCTaGGGGTGGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRLWLGC*GWPQLL
Trigger: GAGGAGCTGGGGCCACCCTCAGCACCCTAACCAGAG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR GCA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: AAGICGPEVVAAAALVTLASWNH*RQLRHC
Trigger: GCAGTGCCGGAGCTGCCTGCAGTGGTTCCATGAGGC...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGASWNH*RQLRHC
Trigger: GCAGTGCCGGAGCTGCCTGCAGTGGTTCCATGAGGC...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACCATAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDHRGGA*SDTGCR
Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTATG...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAGGGGCTCGGGCTGATTaGGCACTGCTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGGARAD*ALLRVA
Trigger: GGCCACCCTCAGCAGTGCGCAATCAGCCCGAGCCCC...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGACATCCGGATGGGGCTaGTGGGCAGGCAGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWTSGWG*WAGSGH
Trigger: ATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGATGT...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp ACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TAQSHQAVLSEQGPGQGPQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...GGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGCCCTGCCCTGGTGAGTaGTCCATCTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGPCPGE*SISSRG
Trigger: CCCCCTACTGGAGATGGAGCACTCACCAGGGCAGGG...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCCTCCCCCAGGGCCCTaGCCTGGTGAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDPPPGP*PGECSI
Trigger: GATGGAGCACTCACCAGGGCAGGGCCCTGGGGGAGG...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495509.6
CDS-3UTR CCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCCCAAAGCCGAGGCCTaGGGCCAGAGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDPKAEA*GQRWEQ
Trigger: CTGCTCCCACCTCTGGCCCCAGGCCTCGGCTTTGGG...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCCAGGGGCTGGAGCCCTaGGAACATGGCAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGQGLEP*EHGSPG
Trigger: ACCAGGACTGCCATGTTCCCAGGGCTCCAGCCCCTG...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGTCCCTCTCCAGGGGCTaGAGCCCTGGGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGSLSRG*SPGNMA
Trigger: TGCCATGTTCCCAGGGCTCCAGCCCCTGGAGAGGGA...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGTCCCTCTCCAGGGGCTaGAGCCCTGGGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: AAGICGPEVVAAAALVTLSLSRG*SPGNMA
Trigger: TGCCATGTTCCCAGGGCTCCAGCCCCTGGAGAGGGA...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCGGGCACCTCCCCTCTTaGTGGCGATCGCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTGHLPS*WRSQRH
Trigger: GTGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCC...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVGLLRH*VQASWN
Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCTCCGGATGGGGCTGCTaGGCAGGCAGCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSSGWGC*AGSGHL
Trigger: CAGATGCCCGCTGCCTGCCCAGCAGCCCCATCCGGA...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTCCCACTCCCCACTCTTaGATTCCAGCCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGPTPHS*IPAWAV
Trigger: TACTGCCCAGGCTGGAATCCAAGAGTGGGGAGTGGG...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427826.1
CDS-3UTR CCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCAAGCAAACATCCGGATaGGGCTGCTGCAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSKQTSG*GCCSAL
Trigger: GAGGGCACTGCAGCAGCCCCATCCGGATGTTTGCTT...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCCGCCGAAGAAGAGGCTaGCCCTCCGCGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSRRRRG*PSAAWG
Trigger: TCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCG...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTACCGGATGGGGTGACCTaGGCAGGCAGCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLPDGVT*AGSGHL
Trigger: CAGATGCCCGCTGCCTGCCCAGGTCACCCCATCCGG...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427826.1
CDS-3UTR CCA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAAGCAAACATCCGGATaGGGTGACCTGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDKQTSG*GDLGRQ
Trigger: CTGCCTGCCCAGGTCACCCCATCCGGATGTTTGCTT...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427826.1
CDS-3UTR TCA 90 bp GGTACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTAGCTGGGTCCCAAAGTaGGGAGGCACCAGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GTAQSHQAVLSEQGPGQGSWVPK*GGTRAA
Trigger: AGCCGCTCTGGTGCCTCCTCACTTTGGGACCCAGCT...ACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR TCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGLASTS*PSQSRG
Trigger: GCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAG...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRLASTS*PSQSRG
Trigger: GCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGDTSHS*PAGSQG
Trigger: TCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp GAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGATCCTTTGGGGGTGTCTaGAAGCTCCCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: EQGPGQGPLGTGNQPHLGSFGGV*KLPQEQ
Trigger: TTGCTCCTGGGGGAGCTTTCAGACACCCCCAAAGGA...TCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGTCCTTTGGGGGTGTCTaGAAGCTCCCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRSFGGV*KLPQEQ
Trigger: TTGCTCCTGGGGGAGCTTTCAGACACCCCCAAAGGA...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATAGTGCCCTCTGCAGATaGGCCCGCTCCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDSALCR*ARSLCS
Trigger: GGAGCAGAGGGAGCGGGCTCATCTGCAGAGGGCACT...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000495509.6
CDS-3UTR TCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCCCCTTCCTCCGACCTaGGATTCGCCCTTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDPLPPT*DSPLGH
Trigger: GTGCCCCAAGGGCGAATCTCAGGTCGGAGGAAGGGG...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR TCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCTCTGGTTAGGGTGCTaGGGGTGGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDLWLGC*GWPQLL
Trigger: GAGGAGCTGGGGCCACCCTCAGCACCCTAACCAGAG...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR GCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAGGCATACCCAGGATGTaGCCTCTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGGIPRM*PLPLQG
Trigger: CCCCTGGAGAGGGAGAGGGCACATCCTGGGTATGCC...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGGGCATACCCAGGATGTaGCCTCTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRGIPRM*PLPLQG
Trigger: CCCCTGGAGAGGGAGAGGGCACATCCTGGGTATGCC...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAGCCTCATGGAACCACTaGAGGCAGCTCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGASWNH*RQLRHC
Trigger: GCAGTGCCGGAGCTGCCTGCAGTGGTTCCATGAGGC...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACTGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT +
Preference number: 4 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDCSDTG*RPHGTT
Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTATGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVCSDTG*RPHGTT
Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCATAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLHRGGA*SDTGCR
Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTATG...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCGCCCATCAGTCCATCTaGCCAGCACATCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: GPGQGPLGTGNQPHLGLLAHQSI*PAHLDP
Trigger: AGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGC...GAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCAGGGGCTGGAGCCCTaGGAACATGGCAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLQGLEP*EHGSPG
Trigger: ACCAGGACTGCCATGTTCCCAGGGCTCCAGCCCCTG...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCAGGGGCTGGAGCCCTaGGAACATGGCAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRQGLEP*EHGSPG
Trigger: ACCAGGACTGCCATGTTCCCAGGGCTCCAGCCCCTG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGTCCCTCTCCAGGGGCTaGAGCCCTGGGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGSLSRG*SPGNMA
Trigger: TGCCATGTTCCCAGGGCTCCAGCCCCTGGAGAGGGA...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCGGGCACCTCCCCTCTTaGTGGCGATCGCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGGHLPS*WRSQRH
Trigger: GTGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCC...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGGCTTCATACCCAGCATaGCCCGGGCATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGASYPA*PGHRGP
Trigger: AGGGCCCCTATGCCCGGGCCATGCTGGGTATGAAGC...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAGCTTCATACCCAGCATaGCCCGGGCATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGASYPA*PGHRGP
Trigger: AGGGCCCCTATGCCCGGGCCATGCTGGGTATGAAGC...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTGLLRH*VQASWN
Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLGLLRH*VQASWN
Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTGGGGGCAGCGGGCATCTGTaGGCCGGAAGTTGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: DKLRHRGEGGAERLGRPGGSGHL*AGSCSR
Trigger: GCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCC...CCCAGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000427826.1
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGGAGGCAGTCATCGAGTaGGGGGCACTTTTAGGGATG +
Preference number: 4 (lower is better)
Translates to: QSHQAVLSEQGPGQGPLGEAVIE*GALLGM
Trigger: CATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTC...CCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCCTGAGATTCGCCCTTaGGGCACGAGGGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLPEIRP*GTRESP
Trigger: GGGGGATTCCCTCGTGCCCCAAGGGCGAATCTCAGG...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCACCTCCAACAGGCCTaGAGGGCGCCGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRHLQQA*RAPKKR
Trigger: CCTCTTCTTCGGCGCCCTCCAGGCCTGTTGGAGGTG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGCACCTCCAACAGGCCTaGAGGGCGCCGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWHLQQA*RAPKKR
Trigger: CCTCTTCTTCGGCGCCCTCCAGGCCTGTTGGAGGTG...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR TCA 90 bp GACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTGGGCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: DKLRHRGEGGAERLGRPGLASTS*PSQSRG
Trigger: GCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAG...CCCAGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRDTSHS*PAGSQG
Trigger: TCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTC...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCAGCAAACACTGAGGTaGTACAGGACAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GPGQGPLGTGNQPHLGLLQQTLR*YRTRWA
Trigger: GGCCCATCTTGTCCTGTATCACCTCAGTGTTTGCTG...GAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTCTGATTGCGCACTGCTaGGGGTGGCCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GDKLRHRGEGGAERLGRPLIAHC*GWPQLL
Trigger: GAGGAGCTGGGGCCACCCTCAGCAGTGCGCAATCAG...AGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTTCCTGGGGCTCGGGCTaGTTGCGCACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GDKLRHRGEGGAERLGRPSWGSG*LRTAEG
Trigger: ACCCTCAGCAGTGCGCAATCAGCCCGAGCCCCAGGA...AGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGTGAAGTTCCAGGGGTaGCCTGTCTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWVKFQG*PVWGST
Trigger: AGTGGACCCCCAGACAGGTCACCCCTGGAACTTCAC...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGCATACCCAGGATGTaGCCTCTCCCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLGIPRM*PLPLQG
Trigger: CCCCTGGAGAGGGAGAGGGCACATCCTGGGTATGCC...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDCSDTG*RPHGTT
Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGCATAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGHRGGA*SDTGCR
Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTATG...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGGAAGTTGTAGCCGCTaGTGCCCTGGTAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRGSCSR*CPGNSG
Trigger: ACCAGAGTTACCAGGGCAGCAGCGGCTACAACTTCC...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427826.1
ENST00000475137.5
CDS-3UTR GCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGACAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCCAGAGGTCCCTGCGGTaGTGGCAGAAGGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSQRSLR*WQKGGR
Trigger: CCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTG...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCACTCAACCAGGTACTaGACAGAGCCATCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNHSTRY*TEPSGR
Trigger: ACGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTG...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCACTCAACCAGGTACTaGACAGAGCCATCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLHSTRY*TEPSGR
Trigger: ACGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTG...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTACCCTGCCCTGGTGAGTaGTCCATCTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLPCPGE*SISSRG
Trigger: CCCCCTACTGGAGATGGAGCACTCACCAGGGCAGGG...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CAGGGACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGACCCAAAGCCGAGGCCTaGGGCCAGAGGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGPQSQSDRHNRGVPLQGPKAEA*GQRWEQ
Trigger: CTGCTCCCACCTCTGGCCCCAGGCCTCGGCTTTGGG...TCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR CCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCGCCCATCAGTCCATCTaGCCAGCACATCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLAHQSI*PAHLDP
Trigger: AGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGC...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTGGGCAGGGGCTGGAGCCCTaGGAACATGGCAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DKLRHRGEGGAERLGRPGQGLEP*EHGSPG
Trigger: ACCAGGACTGCCATGTTCCCAGGGCTCCAGCCCCTG...CCCAGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCATCGCAAAGACACACTaGCGGCATACCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSIAKTH*RHTQDV
Trigger: CACATCCTGGGTATGCCGCCAGTGTGTCTTTGCGAT...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCACCTCCCCTCTTGGTaGCGATCGCAAAGACACACT +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNHLPSW*RSQRHT
Trigger: AGTGTGTCTTTGCGATCGCCACCAAGAGGGGAGGTG...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGGLLRH*VQASWN
Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427826.1
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACGAGGCAGTCATCGAGTaGGGGGCACTTTTAGGGATG +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDEAVIE*GALLGM
Trigger: CATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTC...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGAGAGGCAGTCATCGAGTaGGGGGCACTTTTAGGGATG +
Preference number: 4 (lower is better)
Translates to: EQGPGQGPLGTGNQPHLGEAVIE*GALLGM
Trigger: CATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTC...TCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp ACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCCCACTCCCCACTCTTaGATTCCAGCCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: TAQSHQAVLSEQGPGQGPPTPHS*IPAWAV
Trigger: TACTGCCCAGGCTGGAATCCAAGAGTGGGGAGTGGG...GGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
CDS-3UTR CCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAAAGAGTCGGACCCGGTaGGAGAGGGAATCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGKSRTR*ERESPQ
Trigger: CTGAGGGGATTCCCTCTCCCACCGGGTCCGACTCTT...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGAAGAGTCGGACCCGGTaGGAGAGGGAATCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWKSRTR*ERESPQ
Trigger: CTGAGGGGATTCCCTCTCCCACCGGGTCCGACTCTT...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR TCA 90 bp GGGACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GTTVSERQTQQRSSSPGRLASTS*PSQSRG
Trigger: GCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAG...CCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR TCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGCAAACACTGAGGTaGTACAGGACAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGQQTLR*YRTRWA
Trigger: GGCCCATCTTGTCCTGTATCACCTCAGTGTTTGCTG...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCCCCAATTCTCAGAAGTaGAGGGGAGGATCTCACGAT +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSPNSQK*RGGSHD
Trigger: ATCGTGAGATCCTCCCCTTCACTTCTGAGAATTGGG...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTCCCAATTCTCAGAAGTaGAGGGGAGGATCTCACGAT +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGPNSQK*RGGSHD
Trigger: ATCGTGAGATCCTCCCCTTCACTTCTGAGAATTGGG...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGTCCTTTGGGGGTGTCTaGAAGCTCCCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRSFGGV*KLPQEQ
Trigger: TTGCTCCTGGGGGAGCTTTCAGACACCCCCAAAGGA...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGTCCTTTGGGGGTGTCTaGAAGCTCCCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGSFGGV*KLPQEQ
Trigger: TTGCTCCTGGGGGAGCTTTCAGACACCCCCAAAGGA...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTATCTCTCTCCCTGAAATaGAACGGTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQAAGICGPEVVAAAALVSLSLK*NGPCGC
Trigger: ACAGCCACAAGGACCGTTTCATTTCAGGGAGAGAGA...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAGTGAAGTTCCAGGGGTaGCCTGTCTGGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGVKFQG*PVWGST
Trigger: AGTGGACCCCCAGACAGGTCACCCCTGGAACTTCAC...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCGTGGGGAAACCAATGTaGAGTTCCAGGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGVGKPM*SSRGDL
Trigger: CAGGTCACCCCTGGAACTTCACATTGGTTTCCCCAC...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CAGGGACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGACCCCTTCCTCCGACCTaGGATTCGCCCTTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QGPQSQSDRHNRGVPLQGPLPPT*DSPLGH
Trigger: GTGCCCCAAGGGCGAATCTCAGGTCGGAGGAAGGGG...TCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR GCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTNSAVG*SDVQHP
Trigger: GGGATGCTGGACATCTGAGCAACCGACAGCAGAGTT...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTNSAVG*SDVQHP
Trigger: GGGATGCTGGACATCTGAGCAACCGACAGCAGAGTT...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGTGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGCSDTG*RPHGTT
Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTTGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT +
Preference number: 4 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPCSDTG*RPHGTT
Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGACATAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGHRGGA*SDTGCR
Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTATG...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGAGGGAAGCTGGTGAGTaGTCCATCTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWREAGE*SISSRG
Trigger: CCCCCTACTGGAGATGGAGCACTCACCAGCTTCCCT...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCGGAAGTTGTAGCCGCTaGTGCCCTGGTAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGGSCSR*CPGNSG
Trigger: ACCAGAGTTACCAGGGCAGCAGCGGCTACAACTTCC...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTGCCCATCAGTCCATCTaGCCAGCACATCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPAHQSI*PAHLDP
Trigger: AGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGC...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCATCGCAAAGACACACTaGCGGCATACCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLIAKTH*RHTQDV
Trigger: CACATCCTGGGTATGCCGCCAGTGTGTCTTTGCGAT...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGGCACCTCCCCTCTTaGTGGCGATCGCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSGHLPS*WRSQRH
Trigger: GTGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCC...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWGLLRH*VQASWN
Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGGTCCCTGCGGTGCTaGCAGAAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGRSLRC*QKGGRK
Trigger: CTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCT...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GGTACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTAAGCAAACATCCGGATaGGGCTGCTGCAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GTAQSHQAVLSEQGPGQGKQTSG*GCCSAL
Trigger: GAGGGCACTGCAGCAGCCCCATCCGGATGTTTGCTT...ACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp TCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGGCAGCAGGGCAAGAGTCGGACCCGGTaGGAGAGGGAATCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQSDRHNRGVPLQGGQQGKSRTR*ERESPQ
Trigger: CTGAGGGGATTCCCTCTCCCACCGGGTCCGACTCTT...GCCCTGCTGCCCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR TCA 90 bp GGTTCCCAGGGACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCAGCTGGGTCCCAAAGTaGGGAGGCACCAGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GSQGPQSQSDRHNRGVPLSWVPK*GGTRAA
Trigger: AGCCGCTCTGGTGCCTCCTCACTTTGGGACCCAGCT...GAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTCCCTGGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR TCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACCCAATTCTCAGAAGTaGAGGGGAGGATCTCACGAT +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGPNSQK*RGGSHD
Trigger: ATCGTGAGATCCTCCCCTTCACTTCTGAGAATTGGG...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATTCCTTTGGGGGTGTCTaGAAGCTCCCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDSFGGV*KLPQEQ
Trigger: TTGCTCCTGGGGGAGCTTTCAGACACCCCCAAAGGA...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGTCTCTCTCCCTGAAATaGAACGGTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TEPSGRTLRARTRTGSPRSLSLK*NGPCGC
Trigger: ACAGCCACAAGGACCGTTTCATTTCAGGGAGAGAGA...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCTCTCTCTCCCTGAAATaGAACGGTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLSLSLK*NGPCGC
Trigger: ACAGCCACAAGGACCGTTTCATTTCAGGGAGAGAGA...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGCTCAGACACTGGGTaGAGGCCTCATGGAACCACT +
Preference number: 4 (lower is better)
Translates to: PQRSLRCWQKGGRKQTSGCSDTG*RPHGTT
Trigger: AGTGGTTCCATGAGGCCTGCACCCAGTGTCTGAGCA...TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTACATAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLHRGGA*SDTGCR
Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTATG...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCCATAGAGGAGGGGCTTaGTCAGACACTGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSHRGGA*SDTGCR
Trigger: CCTGCACCCAGTGTCTGAGCAAGCCCCTCCTCTATG...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCAGGGAAGCTGGTGAGTaGTCCATCTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSREAGE*SISSRG
Trigger: CCCCCTACTGGAGATGGAGCACTCACCAGCTTCCCT...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR GCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGGAAGTTGTAGCCGCTaGTGCCCTGGTAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWGSCSR*CPGNSG
Trigger: ACCAGAGTTACCAGGGCAGCAGCGGCTACAACTTCC...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp GGTACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCACTCAACCAGGTACTaGACAGAGCCATCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GTAQSHQAVLSEQGPGQGHSTRY*TEPSGR
Trigger: ACGGCCTGATGGCTCTGTGCAGTACCTGGTTGAGTG...ACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGGCCCATCAGTCCATCTaGCCAGCACATCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLAHQSI*PAHLDP
Trigger: AGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGC...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGGCCCATCAGTCCATCTaGCCAGCACATCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRAHQSI*PAHLDP
Trigger: AGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGC...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCGAATCATCCTCAAACTaGACCAGACACACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: DPDRVPSGQVTNPTSDSSESSSN*TRHTSL
Trigger: TAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTC...GGAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp TGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTATCGCAAAGACACACTaGCGGCATACCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: CTEPSGRTLRARTRTGSPIAKTH*RHTQDV
Trigger: CACATCCTGGGTATGCCGCCAGTGTGTCTTTGCGAT...AGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCATCGCAAAGACACACTaGCGGCATACCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGIAKTH*RHTQDV
Trigger: CACATCCTGGGTATGCCGCCAGTGTGTCTTTGCGAT...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCACCTCCCCTCTTGGTaGCGATCGCAAAGACACACT +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLHLPSW*RSQRHT
Trigger: AGTGTGTCTTTGCGATCGCCACCAAGAGGGGAGGTG...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCACCTCCCCTCTTGGTaGCGATCGCAAAGACACACT +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGHLPSW*RSQRHT
Trigger: AGTGTGTCTTTGCGATCGCCACCAAGAGGGGAGGTG...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAGGCTTGCTCAGACACTaGGTGCAGGCCTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGGLLRH*VQASWN
Trigger: GTTCCATGAGGCCTGCACCCAGTGTCTGAGCAAGCC...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCAAGAACGTTCTCCTTTaGGGGTGTCTGAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPKNVLL*GCLKAP
Trigger: GGGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTT...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACAAGAACGTTCTCCTTTaGGGGTGTCTGAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDKNVLL*GCLKAP
Trigger: GGGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTT...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGMKRSL*LLRAER
Trigger: CCTCTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTACCCACTCCCCACTCTTaGATTCCAGCCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLPTPHS*IPAWAV
Trigger: TACTGCCCAGGCTGGAATCCAAGAGTGGGGAGTGGG...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
CDS-3UTR CCA 90 bp ACACAACAGAGGAGTTCCTCTCCAGGGAGGGCAGCAGGGCTAATGTCTTTCCATCGCCGAAGAAGAGGCTaGCCCTCCGCGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TQQRSSSPGRAAGLMSFHRRRRG*PSAAWG
Trigger: TCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCG...ATGGAAAGACATTAGCCCTGCTGCCCTCCCTGGAGAGGAACTCCTCTGTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR TCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTCACTGTCCACCTTTTTaGTGGTACCCAAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGHCPPF*WYPSIA
Trigger: TGCTATACTTGGGTACCATCAAAAAGGTGGACAGTG...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGTACTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCAGCAAACACTGAGGTaGTACAGGACAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GTAQSHQAVLSEQGPGQGQQTLR*YRTRWA
Trigger: GGCCCATCTTGTCCTGTATCACCTCAGTGTTTGCTG...ACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCAGCAAACACTGAGGTaGTACAGGACAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRQQTLR*YRTRWA
Trigger: GGCCCATCTTGTCCTGTATCACCTCAGTGTTTGCTG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCAGCAAACACTGAGGTaGTACAGGACAAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLQQTLR*YRTRWA
Trigger: GGCCCATCTTGTCCTGTATCACCTCAGTGTTTGCTG...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCCTTAATCTCTCTCCCTaGAATGAAACGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GPGQGPLGTGNQPHLGLLLNLSP*NETVLV
Trigger: CACAAGGACCGTTTCATTTCAGGGAGAGAGATTAAG...GAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRNSAVG*SDVQHP
Trigger: GGGATGCTGGACATCTGAGCAACCGACAGCAGAGTT...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGNSAVG*SDVQHP
Trigger: GGGATGCTGGACATCTGAGCAACCGACAGCAGAGTT...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCGAATCATCCTCAAACTaGACCAGACACACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTESSSN*TRHTSL
Trigger: TAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTC...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGATCGCAAAGACACACTaGCGGCATACCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLIAKTH*RHTQDV
Trigger: CACATCCTGGGTATGCCGCCAGTGTGTCTTTGCGAT...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTACACCTCCCCTCTTGGTaGCGATCGCAAAGACACACT +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLHLPSW*RSQRHT
Trigger: AGTGTGTCTTTGCGATCGCCACCAAGAGGGGAGGTG...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCACCTCCCCTCTTGGTaGCGATCGCAAAGACACACT +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDHLPSW*RSQRHT
Trigger: AGTGTGTCTTTGCGATCGCCACCAAGAGGGGAGGTG...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCCCCTTCAGTCCATATaGCAGAGAAAGCTTCATACC +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNPLQSI*QRKLHT
Trigger: GGTATGAAGCTTTCTCTGCCATATGGACTGAAGGGG...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCCCCTTCAGTCCATATaGCAGAGAAAGCTTCATACC +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLPLQSI*QRKLHT
Trigger: GGTATGAAGCTTTCTCTGCCATATGGACTGAAGGGG...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCAAGAACGTTCTCCTTTaGGGGTGTCTGAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGKNVLL*GCLKAP
Trigger: GGGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTT...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGAATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGMKRSL*LLRAER
Trigger: CCTCTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNMKRSL*LLRAER
Trigger: CCTCTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGAGGCAGTCATCGAGTaGGGGGCACTTTTAGGGATG +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLEAVIE*GALLGM
Trigger: CATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTC...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000374512.7
ENST00000427826.1
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CCA 90 bp AGTTCCTCTCCAGGGAGGGCAGCAGGGCTAATGTCTTTCCATAGAACCAGAAACTGGCCCTCCGCGGCTTaGGGAGCGAAGAGTCGGACC +
Preference number: 4 (lower is better)
Translates to: SSSPGRAAGLMSFHRTRNWPSAA*GAKSRT
Trigger: GGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCA...GTTTCTGGTTCTATGGAAAGACATTAGCCCTGCTGCCCTCCCTGGAGAGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR CCA 90 bp ACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGGCAGCAGGGCTAATGTCTTTGGCCTCCAACAGGCCTaGAGGGCGCCGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TDTTEEFLSREGSRANVFGLQQA*RAPKKR
Trigger: CCTCTTCTTCGGCGCCCTCCAGGCCTGTTGGAGGCC...AAAGACATTAGCCCTGCTGCCCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR TCA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCCACTGTCCACCTTTTTaGTGGTACCCAAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPHCPPF*WYPSIA
Trigger: TGCTATACTTGGGTACCATCAAAAAGGTGGACAGTG...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR TCA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTTCTTACAGCAAACACTaGGGTGATACAGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGSYSKH*GDTGQD
Trigger: ATCTTGTCCTGTATCACCTCAGTGTTTGCTGTAAGA...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCCCAATTCTCAGAAGTaGAGGGGAGGATCTCACGAT +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLPNSQK*RGGSHD
Trigger: ATCGTGAGATCCTCCCCTTCACTTCTGAGAATTGGG...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGCCCAATTCTCAGAAGTaGAGGGGAGGATCTCACGAT +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWPNSQK*RGGSHD
Trigger: ATCGTGAGATCCTCCCCTTCACTTCTGAGAATTGGG...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGTCTCTCTCCCTGAAATaGAACGGTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGSLSLK*NGPCGC
Trigger: ACAGCCACAAGGACCGTTTCATTTCAGGGAGAGAGA...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGTCTCTCTCCCTGAAATaGAACGGTCCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLSLSLK*NGPCGC
Trigger: ACAGCCACAAGGACCGTTTCATTTCAGGGAGAGAGA...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCCTTAATCTCTCTCCCTaGAATGAAACGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTLNLSP*NETVLV
Trigger: CACAAGGACCGTTTCATTTCAGGGAGAGAGATTAAG...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCTTAATCTCTCTCCCTaGAATGAAACGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNLNLSP*NETVLV
Trigger: CACAAGGACCGTTTCATTTCAGGGAGAGAGATTAAG...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTTAATCTCTCTCCCTaGAATGAAACGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EQGPGQGPLGTGNQPHLGLNLSP*NETVLV
Trigger: CACAAGGACCGTTTCATTTCAGGGAGAGAGATTAAG...TCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: PVPGDKLRHRGEGGAERLNSAVG*SDVQHP
Trigger: GGGATGCTGGACATCTGAGCAACCGACAGCAGAGTT...TAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GGGACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGGCCCATCAGTCCATCTaGCCAGCACATCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: GTTVSERQTQQRSSSPGRAHQSI*PAHLDP
Trigger: AGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGC...CCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR CCA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGGAATCATCCTCAAACTaGACCAGACACACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: AAGICGPEVVAAAALVTLESSSN*TRHTSL
Trigger: TAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTC...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAAGAACGTTCTCCTTTaGGGGTGTCTGAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRKNVLL*GCLKAP
Trigger: GGGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTT...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGAAGAACGTTCTCCTTTaGGGGTGTCTGAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLKNVLL*GCLKAP
Trigger: GGGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTT...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGMKRSL*LLRAER
Trigger: CCTCTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGCACTGTCCACCTTTTTaGTGGTACCCAAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGHCPPF*WYPSIA
Trigger: TGCTATACTTGGGTACCATCAAAAAGGTGGACAGTG...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR TCA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCTTACAGCAAACACTaGGGTGATACAGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPSYSKH*GDTGQD
Trigger: ATCTTGTCCTGTATCACCTCAGTGTTTGCTGTAAGA...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR TCA 90 bp AGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGATCTTACAGCAAACACTaGGGTGATACAGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: RAIRPYSPSKDPDRVPSGSYSKH*GDTGQD
Trigger: ATCTTGTCCTGTATCACCTCAGTGTTTGCTGTAAGA...TCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR GCA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCCATAGAACCAGAAACTaGGAATCATCCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTHRTRN*ESSSNW
Trigger: CCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATG...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR GCA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCATAGAACCAGAAACTaGGAATCATCCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLHRTRN*ESSSNW
Trigger: CCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATG...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGGAATCATCCTCAAACTaGACCAGACACACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLESSSN*TRHTSL
Trigger: TAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTC...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGCCCCTTCAGTCCATATaGCAGAGAAAGCTTCATACC +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWPLQSI*QRKLHT
Trigger: GGTATGAAGCTTTCTCTGCCATATGGACTGAAGGGG...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCCCCTTCAGTCCATATaGCAGAGAAAGCTTCATACC +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRPLQSI*QRKLHT
Trigger: GGTATGAAGCTTTCTCTGCCATATGGACTGAAGGGG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAAGAACGTTCTCCTTTaGGGGTGTCTGAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGKNVLL*GCLKAP
Trigger: GGGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTT...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCACTGTCCACCTTTTTaGTGGTACCCAAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRHCPPF*WYPSIA
Trigger: TGCTATACTTGGGTACCATCAAAAAGGTGGACAGTG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCACTGTCCACCTTTTTaGTGGTACCCAAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGHCPPF*WYPSIA
Trigger: TGCTATACTTGGGTACCATCAAAAAGGTGGACAGTG...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGTCTTACAGCAAACACTaGGGTGATACAGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGSYSKH*GDTGQD
Trigger: ATCTTGTCCTGTATCACCTCAGTGTTTGCTGTAAGA...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGCTCTTACAGCAAACACTaGGGTGATACAGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: AVLAEGWKEANIRMGLLGSYSKH*GDTGQD
Trigger: ATCTTGTCCTGTATCACCTCAGTGTTTGCTGTAAGA...GCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTCCCAATTCTCAGAAGTaGAGGGGAGGATCTCACGAT +
Preference number: 4 (lower is better)
Translates to: GDKLRHRGEGGAERLGRPPNSQK*RGGSHD
Trigger: ATCGTGAGATCCTCCCCTTCACTTCTGAGAATTGGG...AGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGCTTAATCTCTCTCCCTaGAATGAAACGGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWLNLSP*NETVLV
Trigger: CACAAGGACCGTTTCATTTCAGGGAGAGAGATTAAG...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPGDKLRHRGEGGAERLGMKRSL*LLRAER
Trigger: CCTCTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...TCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGTCTTACAGCAAACACTaGGGTGATACAGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWSYSKH*GDTGQD
Trigger: ATCTTGTCCTGTATCACCTCAGTGTTTGCTGTAAGA...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGCATAGAACCAGAAACTaGGAATCATCCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRHRTRN*ESSSNW
Trigger: CCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATG...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CCA 90 bp GGAGACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTATGAAACGGTCCTTGTaGCTGTTAAGAGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GDKLRHRGEGGAERLGRPMKRSL*LLRAER
Trigger: CCTCTCTGCTCTTAACAGCCACAAGGACCGTTTCAT...AGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR TCA 90 bp GACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGGCCTCCCTAGCACTTTTTaGTGGTACCCAAGTATAGCA +
Preference number: 4 (lower is better)
Translates to: DHSLRATDTTEEFLSREGLPSTF*WYPSIA
Trigger: TGCTATACTTGGGTACCATCAAAAAGTGCTAGGGAG...GCCCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR GCA 90 bp CCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATCATAGAACCAGAAACTaGGAATCATCCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: PRGPCGAGRRVEGSKHPDHRTRN*ESSSNW
Trigger: CCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATG...ATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR GCA 90 bp CGACAGACACAACAGAGGAGTTCCTCTCCAGGGAGGGCAGCAGGGCTAATGTCTCATAGAACCAGAAACTaGGAATCATCCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RQTQQRSSSPGRAAGLMSHRTRN*ESSSNW
Trigger: CCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATG...AGACATTAGCCCTGCTGCCCTCCCTGGAGAGGAACTCCTCTGTTGTGTCTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR CCA 90 bp AGTTCCTCTCCAGGGAGGGCAGCAGGGCTAATGTCTTTCCATAGAACCAGAAACGAATCATCCTCAAACTaGACCAGACACACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SSSPGRAAGLMSFHRTRNESSSN*TRHTSL
Trigger: TAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTC...GTTTCTGGTTCTATGGAAAGACATTAGCCCTGCTGCCCTCCCTGGAGAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS CCA 90 bp ACCTCCCTCACCTCCAACAGGCCTGGAGGGCGCCGAAGAAGAGGCTaGCCCTCCGCGGCTTGGGGAGCGAAGAGTCGGACCCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: TSLTSNRPGGRRRRG*PSAAWGAKSRTRWE
Trigger: CTCCCACCGGGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCGCCCTCCAGGCCTGTTGGAGGTGAGGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442136.1
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CAA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTACTGGCCCTCCGCGGCTaGGGGAGCGAAGAGTCGGAC +
Preference number: 5 (lower is better)
Translates to: GQAAGICGPEVVAAAALVLALRG*GSEESD
Trigger: GTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAG...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS CCA 90 bp AACAGGCCTGGAGGGCGCCGAAGAAGAGGCTGGCCCTCCGCGGCTTaGGGAGCGAAGAGTCGGACCCGGTGGGAGAGGGAATCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: NRPGGRRRRGWPSAA*GAKSRTRWERESPQ
Trigger: CTGAGGGGATTCCCTCTCCCACCGGGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCGCCCTCCAGGCCTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000418028.1
ENST00000428274.5
ENST00000441437.1
ENST00000442136.1
ENST00000447305.5
ENST00000459809.5
ENST00000465760.5
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CAA 90 bp TGGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTTCTGGCCAGCACATCTaGACCCTCCCAAAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: WAGSGHLWAGSCSRCCPGSGQHI*TLPKPR
Trigger: CCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGA...ACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp GGGCAGGCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTATCTGGCCAGCACATCTaGACCCTCCCAAAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GQAAGICGPEVVAAAALVSGQHI*TLPKPR
Trigger: CCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGA...TACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp GGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCCTCAGGGCACCTCCCCTCTaGGTGGCGATCGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: GPGQGPLGTGNQPHLGLLRAPPL*VAIAKT
Trigger: TGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCCT...GAGGAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCCTGGCCCTCCGCGGCTaGGGGAGCGAAGAGTCGGAC +
Preference number: 5 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSLALRG*GSEESD
Trigger: GTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAG...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487667.5
ENST00000495185.5
CDS-3UTR CAA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCTCTGGCCAGCACATCTaGACCCTCCCAAAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLSGQHI*TLPKPR
Trigger: CCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGA...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCTGGCCAGCACATCTaGACCCTCCCAAAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDSGQHI*TLPKPR
Trigger: CCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGA...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACAGGGCACCTCCCCTCTaGGTGGCGATCGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNRAPPL*VAIAKT
Trigger: TGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCCT...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGAGGGCACCTCCCCTCTaGGTGGCGATCGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: AAGICGPEVVAAAALVTLRAPPL*VAIAKT
Trigger: TGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCCT...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGAGGGCACCTCCCCTCTaGGTGGCGATCGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: SPEVPAVLAEGWKEANIRRAPPL*VAIAKT
Trigger: TGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCCT...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS TCA 90 bp GTACCCAAGTATAGCAGCCCATCAGTCCATCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGCCTGGGGCCAGAGGTGGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: VPKYSSPSVHLASTS*PSQSRGLGPEVGAG
Trigger: TCCTGCTCCCACCTCTGGCCCCAGGCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGCTGCTATACTTGGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000421466.5
ENST00000427004.5
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000459809.5
ENST00000465760.5
ENST00000487460.5
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp GACAAACTACGGCACAGGGGAGAAGGGGGTGCTGAGCGTCTAGGAAGACCTGGGAGGGCACCTCCCCTCTaGGTGGCGATCGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: DKLRHRGEGGAERLGRPGRAPPL*VAIAKT
Trigger: TGTCTTTGCGATCGCCACCAAGAGGGGAGGTGCCCT...CCCAGGTCTTCCTAGACGCTCAGCACCCCCTTCTCCCCTGTGCCGTAGTTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp CAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACTCGAAGAACGTTCTCCTTaGGGGGTGTCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGPGQGPLGTGNQPHLGLEERSP*GVSESS
Trigger: GGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTTC...GAGTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CAA 90 bp TCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCGAAGAACGTTCTCCTTaGGGGGTGTCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPSKDPDRVPSGQVTNPTEERSP*GVSESS
Trigger: GGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTTC...GGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CAA 90 bp CAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACGAAGAACGTTCTCCTTaGGGGGTGTCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: QAVLSEQGPGQGPLGTGNEERSP*GVSESS
Trigger: GGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTTC...GTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CAA 90 bp AGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCAACCCCACCTCGGACGAAGAACGTTCTCCTTaGGGGGTGTCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SKDPDRVPSGQVTNPTSDEERSP*GVSESS
Trigger: GGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTTC...GTCCGAGGTGGGGTTGGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CAA 90 bp GAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: EPSGRTLRARTRTGSPRDEMKRS*WLLRAE
Trigger: CTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...GTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS CCA 90 bp GTTGCTCAGATGTCCAGCATCCCAGTCCAGCCCCTTCAGTCCATATaGCAGAGAAAGCTTCATACCCAGCATGGCCCGGGCATAGGGGCC +
Preference number: 5 (lower is better)
Translates to: VAQMSSIPVQPLQSI*QRKLHTQHGPGIGA
Trigger: GGCCCCTATGCCCGGGCCATGCTGGGTATGAAGCTTTCTCTGCCATATGGACTGAAGGGGCTGGACTGGGATGCTGGACATCTGAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000488767.1
ENST00000495185.5
ENST00000495509.6
ENST00000496666.1
CDS-3UTR CAA 90 bp GGTTCCCAGGGACCACAGTCTCAGAGCGACAGACACAACAGAGGAGTTCCTCTCTCTGGCCAGCACATCTaGACCCTCCCAAAGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GSQGPQSQSDRHNRGVPLSGQHI*TLPKPR
Trigger: CCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGA...GAGAGGAACTCCTCTGTTGTGTCTGTCGCTCTGAGACTGTGGTCCCTGGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR CAA 90 bp CTGCACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCGCACTGTCCACCTTTTaGATGGTACCCAAGTATAGC +
Preference number: 5 (lower is better)
Translates to: LHRAIRPYSPSKDPDRVPALSTF*MVPKYS
Trigger: GCTATACTTGGGTACCATCAAAAAGGTGGACAGTGC...GGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS-3UTR CAA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCGCACTGTCCACCTTTTaGATGGTACCCAAGTATAGC +
Preference number: 5 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTALSTF*MVPKYS
Trigger: GCTATACTTGGGTACCATCAAAAAGGTGGACAGTGC...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp TCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGGAAGAACGTTCTCCTTaGGGGGTGTCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPEVPAVLAEGWKEANIREERSP*GVSESS
Trigger: GGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTTC...CCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp CTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGAAGAACGTTCTCCTTaGGGGGTGTCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LRCWQKGGRKQTSGWGCWEERSP*GVSESS
Trigger: GGAGCTTTCAGACACCCCCAAAGGAGAACGTTCTTC...CCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp ACAGAGCCATCAGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: TEPSGRTLRARTRTGSPREMKRS*WLLRAE
Trigger: CTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...CCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCTGATGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
CDS-3UTR CAA 90 bp AGGCCGTACTCTCCGAGCAAGGACCCGGACAGGGTCCCCTCGGGACAGGTAACCGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: RPYSPSKDPDRVPSGQVTEMKRS*WLLRAE
Trigger: CTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...GGTTACCTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGTACGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000475137.5
ENST00000495509.6
CDS-3UTR CAA 90 bp CCTCGGACTCCTCCCCCAGTCCCAGGAGACAAACTACGGCACAGGGGAGAAGGGGCACTGTCCACCTTTTaGATGGTACCCAAGTATAGC +
Preference number: 5 (lower is better)
Translates to: PRTPPPVPGDKLRHRGEGALSTF*MVPKYS
Trigger: GCTATACTTGGGTACCATCAAAAAGGTGGACAGTGC...CCCTTCTCCCCTGTGCCGTAGTTTGTCTCCTGGGACTGGGGGAGGAGTCCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374512.7
ENST00000454914.6
ENST00000495509.6
CDS-3UTR CAA 90 bp GCAGCGGGCATCTGTGGGCCGGAAGTTGTAGCCGCTGCTGCCCTGGTAACTCTGGCACTGTCCACCTTTTaGATGGTACCCAAGTATAGC +
Preference number: 5 (lower is better)
Translates to: AAGICGPEVVAAAALVTLALSTF*MVPKYS
Trigger: GCTATACTTGGGTACCATCAAAAAGGTGGACAGTGC...CAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATGCCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS GCA 90 bp TCCACTCCCCAGGGCCACCACAGTAACAGTAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCCAGTCCAGCCCCTTCAGTCCATATG +
Preference number: 5 (lower is better)
Translates to: STPQGHHSNSNSAVG*SDVQHPSPAPSVHM
Trigger: CATATGGACTGAAGGGGCTGGACTGGGATGCTGGACATCTGAGCAACCGACAGCAGAGTTACTGTTACTGTGGTGGCCCTGGGGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS GCA 90 bp CTCACTCCCCAGGGCCACCACAGTAACAGTAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCCAGTCCAGCCCCTTCAGTCCATATG +
Preference number: 5 (lower is better)
Translates to: LTPQGHHSNSNSAVG*SDVQHPSPAPSVHM
Trigger: CATATGGACTGAAGGGGCTGGACTGGGATGCTGGACATCTGAGCAACCGACAGCAGAGTTACTGTTACTGTGGTGGCCCTGGGGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487460.5
ENST00000488767.1
ENST00000496666.1
CDS-3UTR CAA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGGCACTGTCCACCTTTTaGATGGTACCCAAGTATAGC +
Preference number: 5 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLALSTF*MVPKYS
Trigger: GCTATACTTGGGTACCATCAAAAAGGTGGACAGTGC...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp GTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: VPAVLAEGWKEANIRMGLEMKRS*WLLRAE
Trigger: CTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...CAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp TGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: CGAGRRVEGSKHPDGAAGEMKRS*WLLRAE
Trigger: CTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...CCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS-3UTR CAA 90 bp TCTTTCCATAGAACCAGAAACTGCGAATCATCCTCAAACTGGACCAGACACACCCTGGCCCTCCGCGGCTaGGGGAGCGAAGAGTCGGAC +
Preference number: 5 (lower is better)
Translates to: SFHRTRNCESSSNWTRHTLALRG*GSEESD
Trigger: GTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAG...GGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459809.5
CDS-3UTR CAA 90 bp TGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTGGAAGGAAGCAAACATCCGAAATGAAACGGTCCTaGTGGCTGTTAAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: CPQRSLRCWQKGGRKQTSEMKRS*WLLRAE
Trigger: CTCTGCTCTTAACAGCCACAAGGACCGTTTCATTTC...GGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS GCA 90 bp CCAGGGAGGGCAGCAGGGCTAATGTCTTTCCATAGAACCAGAAACTaGGAATCATCCTCAAACTGGACCAGACACACCTCCCTAGCACTG +
Preference number: 5 (lower is better)
Translates to: PGRAAGLMSFHRTRN*ESSSNWTRHTSLAL
Trigger: CAGTGCTAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAAAGACATTAGCCCTGCTGCCCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000421466.5
ENST00000427004.5
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS GCA 90 bp CCAGGGAGGGCAGCAGGGCTAATGTCTTTCCATAGAACCAGAAACTaGGAATCATCCTCAAACTGGACCAGACACACCTCCCTAGCACTT +
Preference number: 5 (lower is better)
Translates to: PGRAAGLMSFHRTRN*ESSSNWTRHTSLAL
Trigger: AAGTGCTAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAAAGACATTAGCCCTGCTGCCCTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459809.5
ENST00000465760.5
CDS CCA 90 bp CAGAGCTCAAACACTACCCCCAAGGGACTCCCTTCCCCAGAATACTaGCTACCAGACACTAGTTCTAGAAGTCGGTCTAGGCCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: QSSNTTPKGLPSPEY*LPDTSSRSRSRPRS
Trigger: ACTTCTTGGCCTAGACCGACTTCTAGAACTAGTGTCTGGTAGCCAGTATTCTGGGGAAGGGAGTCCCTTGGGGGTAGTGTTTGAGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479029.1
ENST00000482971.1
CDS GCA 90 bp TCCAGGGGCTGGAGCCCTGGGAACATGGCAGTCCTGGTGATAAGCTaGAGTGATAATAGTAGACCACTTATTGCATACCTGTGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SRGWSPGNMAVLVIS*SDNSRPLIAYLCVL
Trigger: AAGCACACACAGGTATGCAATAAGTGGTCTACTATTATCACTGCAGCTTATCACCAGGACTGCCATGTTCCCAGGGCTCCAGCCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488767.1
ENST00000496666.1
CDS GCA 90 bp CCCATAACTGTCCCAAACCCTAAACTTACCTCCTATCCCCCTGAGTaGTACCCTCATCCTGTTCTTTTTCCTTCATTTCCTGGGATCCAC +
Preference number: 5 (lower is better)
Translates to: PITVPNPKLTSYPPE*YPHPVLFPSFPGIH
Trigger: GTGGATCCCAGGAAATGAAGGAAAAAGAACAGGATGAGGGTAGCACTCAGGGGGATAGGAGGTAAGTTTAGGGTTTGGGACAGTTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000487460.5
ENST00000488767.1
ENST00000496666.1
CDS CCA 90 bp CTAATGTCTTTCCATAGAACCAGAAACTGCGAATCATCCTCAAACTaGACCAGACACACCTCCCTAGCACTGTCCACCTTTTTGATGGTA +
Preference number: 5 (lower is better)
Translates to: LMSFHRTRNCESSSN*TRHTSLALSTFLMV
Trigger: TACCATCAAAAAGGTGGACAGTGCTAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAAAGACATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000421466.5
ENST00000427004.5
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS CCA 90 bp CTAATGTCTTTCCATAGAACCAGAAACTGCGAATCATCCTCAAACTaGACCAGACACACCTCCCTAGCACTTTTTGATGGTACCCAAGTA +
Preference number: 5 (lower is better)
Translates to: LMSFHRTRNCESSSN*TRHTSLALFDGTQV
Trigger: TACTTGGGTACCATCAAAAAGTGCTAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAAAGACATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459809.5
ENST00000465760.5
CDS CCA 72 bp GGAGGGCGCCGAAGAAGAGGCTGGCCCTCCGCGGCTTaGGGAGCGAAGAGTCGGACCCGGTGGGAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: GGRRRRGWPSAA*GAKSRTRWERE
Trigger: TTCCCTCTCCCACCGGGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000418028.1
ENST00000428274.5
ENST00000441437.1
ENST00000442136.1
ENST00000447305.5
ENST00000459809.5
ENST00000465760.5
ENST00000487667.5
ENST00000495185.5
CDS CAA 72 bp TGGAGGGCGCCGAAGAAGAGGCTGGCCCTCCGCGGCTaGGGGAGCGAAGAGTCGGACCCGGTGGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: WRAPKKRLALRG*GSEESDPVGEG
Trigger: TCCCTCTCCCACCGGGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCGCCCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000418028.1
ENST00000428274.5
ENST00000441437.1
ENST00000442136.1
ENST00000447305.5
ENST00000459809.5
ENST00000465760.5
ENST00000487667.5
ENST00000495185.5
CDS CAA 90 bp CAACAGGCCTGGAGGGCGCCGAAGAAGAGGCTGGCCCTCCGCGGCTaGGGGAGCGAAGAGTCGGACCCGGTGGGAGAGGGAATCCCCTCA +
Preference number: 6 (lower is better)
Translates to: QQAWRAPKKRLALRG*GSEESDPVGEGIPS
Trigger: TGAGGGGATTCCCTCTCCCACCGGGTCCGACTCTTCGCTCCCCAAGCCGCGGAGGGCCAGCCTCTTCTTCGGCGCCCTCCAGGCCTGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000418028.1
ENST00000428274.5
ENST00000441437.1
ENST00000442136.1
ENST00000447305.5
ENST00000459809.5
ENST00000465760.5
ENST00000487667.5
ENST00000495185.5
CDS CCA 72 bp CTGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTaGAAGGAAGCAAACATCCGGATGGGGCTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: LSPEVPAVLAEG*KEANIRMGLGR
Trigger: CCTGCCCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419154.5
CDS CCA 72 bp CTGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTaGAAGGAAGCAAACATCCGGATGGGGCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LSPEVPAVLAEG*KEANIRMGLLG
Trigger: CCCCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479029.1
ENST00000482971.1
CDS CCA 72 bp CTGTCCCCAGAGGTCCCTGCGGTGCTGGCAGAAGGGTaGAAGGAAGCAAACATCCGGATGGGGCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LSPEVPAVLAEG*KEANIRMGLLQ
Trigger: CTGCAGCAGCCCCATCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCAGGGACCTCTGGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374512.7
ENST00000454914.6
CDS CCA 72 bp GCACCTCCCCTCTTGGTGGCGATCGCAAAGACACACTaGCGGCATACCCAGGATGTGCCCTCTCCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: APPLLVAIAKTH*RHTQDVPSPSP
Trigger: TGGAGAGGGAGAGGGCACATCCTGGGTATGCCGCCAGTGTGTCTTTGCGATCGCCACCAAGAGGGGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487667.5
ENST00000488767.1
ENST00000495185.5
ENST00000495509.6
ENST00000496666.1
CDS TCA 72 bp TATAGCAGCCCATCAGTCCATCTGGCCAGCACATCTTaGCCCTCCCAAAGCCGAGGCCTGGGGCCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: YSSPSVHLASTS*PSQSRGLGPEV
Trigger: CACCTCTGGCCCCAGGCCTCGGCTTTGGGAGGGTCAAGATGTGCTGGCCAGATGGACTGATGGGCTGCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000421466.5
ENST00000427004.5
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000459809.5
ENST00000465760.5
ENST00000487460.5
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS CAA 90 bp GGGCGTGGGAGAACTGAGGGTGGAACACGAAGAAAGAGGGCATCCTaGGCTCCTAGAGAGTCTGCCTTGGTCTCACCTGTCCCCATAGAG +
Preference number: 6 (lower is better)
Translates to: GRGRTEGGTRRKRAS*APRESALVSPVPIE
Trigger: CTCTATGGGGACAGGTGAGACCAAGGCAGACTCTCTAGGAGCCAAGGATGCCCTCTTTCTTCGTGTTCCACCCTCAGTTCTCCCACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488767.1
ENST00000496666.1
CDS TCA 72 bp AGTCCTGGTGATAAGCATGGCGACACTTCTCACAGCTaGCCAGCCGGTTCCCAGGGACCACAGTCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: SPGDKHGDTSHS*PAGSQGPQSQS
Trigger: GCTCTGAGACTGTGGTCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTCGCCATGCTTATCACCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000421466.5
ENST00000427004.5
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS CCA 72 bp TCAGTCCATATGGCAGAGAAAGCTTCATACCCAGCATaGCCCGGGCATAGGGGCCCTTCTTCAGGGCACCTC +
Preference number: 6 (lower is better)
Translates to: SVHMAEKASYPA*PGHRGPSSGHL
Trigger: GAGGTGCCCTGAAGAAGGGCCCCTATGCCCGGGCCATGCTGGGTATGAAGCTTTCTCTGCCATATGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000488767.1
ENST00000495185.5
ENST00000495509.6
ENST00000496666.1
CDS CCA 72 bp ATGTCCAGCATCCCAGTCCAGCCCCTTCAGTCCATATaGCAGAGAAAGCTTCATACCCAGCATGGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: MSSIPVQPLQSI*QRKLHTQHGPG
Trigger: GCCCGGGCCATGCTGGGTATGAAGCTTTCTCTGCCATATGGACTGAAGGGGCTGGACTGGGATGCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000488767.1
ENST00000495185.5
ENST00000495509.6
ENST00000496666.1
CDS CAA 90 bp GGAACACGAAGAAAGAGGGCATCCTTGGCTCCTAGAGAGTCTGCCTaGGTCTCACCTGTCCCCATAGAGGAGGGGCTTGCTCAGACACTG +
Preference number: 6 (lower is better)
Translates to: GTRRKRASLAPRESA*VSPVPIEEGLAQTL
Trigger: CAGTGTCTGAGCAAGCCCCTCCTCTATGGGGACAGGTGAGACCAAGGCAGACTCTCTAGGAGCCAAGGATGCCCTCTTTCTTCGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488767.1
ENST00000496666.1
CDS GCA 72 bp CAGGGCCACCACAGTAACAGTAACTCTGCTGTCGGTTaGTCAGATGTCCAGCATCCCAGTCCAGCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: QGHHSNSNSAVG*SDVQHPSPAPS
Trigger: TGAAGGGGCTGGACTGGGATGCTGGACATCTGAGCAACCGACAGCAGAGTTACTGTTACTGTGGTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000488767.1
ENST00000495185.5
ENST00000495509.6
ENST00000496666.1
CDS CAA 72 bp AGAAAGAGGGCATCCTTGGCTCCTAGAGAGTCTGCCTaGGTCTCACCTGTCCCCATAGAGGAGGGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: RKRASLAPRESA*VSPVPIEEGLA
Trigger: AGCAAGCCCCTCCTCTATGGGGACAGGTGAGACCAAGGCAGACTCTCTAGGAGCCAAGGATGCCCTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488767.1
ENST00000496666.1
CDS CCA 72 bp GAACTGAGGGTGGAACACGAAGAAAGAGGGCATCCTTaGCTCCTAGAGAGTCTGCCTTGGTCTCACCTGTCC +
Preference number: 6 (lower is better)
Translates to: ELRVEHEERGHP*LLESLPWSHLS
Trigger: GGACAGGTGAGACCAAGGCAGACTCTCTAGGAGCCAAGGATGCCCTCTTTCTTCGTGTTCCACCCTCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488767.1
ENST00000496666.1
CDS CAA 72 bp AGAACTGAGGGTGGAACACGAAGAAAGAGGGCATCCTaGGCTCCTAGAGAGTCTGCCTTGGTCTCACCTGTC +
Preference number: 6 (lower is better)
Translates to: RTEGGTRRKRAS*APRESALVSPV
Trigger: GACAGGTGAGACCAAGGCAGACTCTCTAGGAGCCAAGGATGCCCTCTTTCTTCGTGTTCCACCCTCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488767.1
ENST00000496666.1
CDS CCA 72 bp AACACTACCCCCAAGGGACTCCCTTCCCCAGAATACTaGCTACCAGACACTAGTTCTAGAAGTCGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: NTTPKGLPSPEY*LPDTSSRSRSR
Trigger: CCTAGACCGACTTCTAGAACTAGTGTCTGGTAGCCAGTATTCTGGGGAAGGGAGTCCCTTGGGGGTAGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479029.1
ENST00000482971.1
CDS CCA 72 bp TTCCATAGAACCAGAAACTGCGAATCATCCTCAAACTaGACCAGACACACCTCCCTAGCACTGTCCACCTTT +
Preference number: 6 (lower is better)
Translates to: FHRTRNCESSSN*TRHTSLALSTF
Trigger: AAAGGTGGACAGTGCTAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374512.7
ENST00000374516.8
ENST00000421466.5
ENST00000427004.5
ENST00000427869.6
ENST00000428274.5
ENST00000447305.5
ENST00000454914.6
ENST00000487460.5
ENST00000487667.5
ENST00000495185.5
ENST00000495509.6
CDS GCA 72 bp GTCCCAAACCCTAAACTTACCTCCTATCCCCCTGAGTaGTACCCTCATCCTGTTCTTTTTCCTTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: VPNPKLTSYPPE*YPHPVLFPSFP
Trigger: AGGAAATGAAGGAAAAAGAACAGGATGAGGGTAGCACTCAGGGGGATAGGAGGTAAGTTTAGGGTTTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000487460.5
ENST00000488767.1
ENST00000496666.1
CDS CCA 72 bp TTCCATAGAACCAGAAACTGCGAATCATCCTCAAACTaGACCAGACACACCTCCCTAGCACTTTTTGATGGT +
Preference number: 6 (lower is better)
Translates to: FHRTRNCESSSN*TRHTSLALFDG
Trigger: ACCATCAAAAAGTGCTAGGGAGGTGTGTCTGGTCCAGTTTGAGGATGATTCGCAGTTTCTGGTTCTATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459809.5
ENST00000465760.5