RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHEX (Homo sapiens)

Ensembl gene IDs: ENSG00000102174

Ensembl transcript IDs: ENST00000379374.5, ENST00000456621.1, ENST00000475778.2, ENST00000682888.1, ENST00000683162.1, ENST00000683214.1, ENST00000683289.1, ENST00000683917.1, ENST00000684143.1, ENST00000684356.1, ENST00000684745.1

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTaGCACTGTGCAACTGTCTCAGGATGCCATAAACCAGCGTCCCAG +
Preference number: 1 (lower is better)
Translates to: PGLKQWAMKAQCSLR*HCATVSGCHKPASQ
Trigger: CTGGGACGCTGGTTTATGGCATCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR TCA 90 bp ATCCGTTACCTAGTAGCCTTTCTGCGAGCTTTGTTCATGCTGACTTaGACAGGGCAATCTGCTACATCAGATGCAAGCTGTGAGACACAG +
Preference number: 1 (lower is better)
Translates to: IRYLVAFLRALFMLT*TGQSATSDASCETQ
Trigger: CTGTGTCTCACAGCTTGCATCTGATGTAGCAGATTGCCCTGTTCAAGTCAGCATGAACAAAGCTCGCAGAAAGGCTACTAGGTAACGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 90 bp ACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTaGATTCCACAGAGCAGCAAGCCCTCCCAGGTATTCATGCACATG +
Preference number: 1 (lower is better)
Translates to: TVEECCVITVHKNVH*IPQSSKPSQVFMHM
Trigger: CATGTGCATGAATACCTGGGAGGGCTTGCTGCTCTGTGGAATGCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 90 bp AAAGGATACATCAATTTAGGCTTCCCACAAAGCTATAGATTGAAATaGTATGTACCACATAACTGTGGCCAACACCCTAAAATGGACAAT +
Preference number: 1 (lower is better)
Translates to: KGYINLGFPQSYRLK*YVPHNCGQHPKMDN
Trigger: ATTGTCCATTTTAGGGTGTTGGCCACAGTTATGTGGTACATAGCATTTCAATCTATAGCTTTGTGGGAAGCCTAAATTGATGTATCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 90 bp TTCATTCTTATATTCCACTTTATAAGCCCTACAACTTTGAACAGATaGTGTCTAGATCCAAGCAGGTCACCTACCCAAATAATGAAAATG +
Preference number: 1 (lower is better)
Translates to: FILIFHFISPTTLNR*CLDPSRSPTQIMKM
Trigger: CATTTTCATTATTTGGGTAGGTGACCTGCTTGGATCTAGACAGCATCTGTTCAAAGTTGTAGGGCTTATAAAGTGGAATATAAGAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR TCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGTCTCCCTCCTCAATGTaGTGTTTGTTCCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCASPSSM*CLFLCT
Trigger: AGTGCAAAGGAACAAACATCACATTGAGGAGGGAGA...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR TCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGATAATTGTTTCCTCATaGTGGTGCCCCTCCATTTTT +
Preference number: 2 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAIIVSS*WCPSIF
Trigger: AAAAATGGAGGGGCACCATCATGAGGAAACAATTAT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCCAGTGCAGCCTCCGCTaGCACTGTGCAACTGTCTCA +
Preference number: 2 (lower is better)
Translates to: YLTVEECCVITVHKNVHCQCSLR*HCATVS
Trigger: TGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTG...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGGCGATGAAGGCTCAGTaGAGCCTCCGCTGGCACTGT +
Preference number: 2 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWAMKAQ*SLRWHC
Trigger: ACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGC...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACCCAGGCCTAAAGCAATaGGCGATGAAGGCTCAGTGC +
Preference number: 2 (lower is better)
Translates to: GNNFKAITILSYTHTHTHPGLKQ*AMKAQC
Trigger: GCACTGAGCCTTCATCGCCCATTGCTTTAGGCCTGG...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGGACTGGACAAAATTTTaGAGATTTCATCTCCTAGTT +
Preference number: 2 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCADWTKF*RFHLLV
Trigger: AACTAGGAGATGAAATCTCCAAAATTTTGTCCAGTC...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACGCAACTGTCTCAGGATaGCATAAACCAGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHATVSG*HKPASQ
Trigger: CTGGGACGCTGGTTTATGGCATCCTGAGACAGTTGC...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR TCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACGAGCTTTGTTCATGCTaGCTTGAACAGGGCAATCTG +
Preference number: 2 (lower is better)
Translates to: GNNFKAITILSYTHTHTHELCSC*LEQGNL
Trigger: CAGATTGCCCTGTTCAAGTCAGCATGAACAAAGCTC...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR TCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACATCAGATGCAAGCTGTaGGACACAGTTTCATTCCAA +
Preference number: 2 (lower is better)
Translates to: GNNFKAITILSYTHTHTHIRCKL*DTVSFQ
Trigger: TTGGAATGAAACTGTGTCTCACAGCTTGCATCTGAT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCATAAAAACGTGCACTaGATTCCACAGAGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWHKNVH*IPQSSK
Trigger: CTTGCTGCTCTGTGGAATGCAGTGCACGTTTTTATG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACCTGTCCATAAAAACGTaGACTGCATTCCACAGAGCA +
Preference number: 2 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHLSIKT*TAFHRA
Trigger: TGCTCTGTGGAATGCAGTGCACGTTTTTATGGACAG...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACACTAGGAGGTTTTGCTaGTTCTGGGACCTAAAGATA +
Preference number: 2 (lower is better)
Translates to: GNNFKAITILSYTHTHTHTRRFC*FWDLKI
Trigger: TATCTTTAGGTCCCAGAAGCAGCAAAACCTCCTAGT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACAACTTTGAACAGATaGTGTCTAGATCCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHTTLNR*CLDPSR
Trigger: CCTGCTTGGATCTAGACAGCATCTGTTCAAAGTTGT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACTTGAACAGGGCAATCTaGTACATCAGATGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNLNRAI*YIRCKL
Trigger: CAGCTTGCATCTGATGTAGCAGATTGCCCTGTTCAA...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CAA 90 bp ACTTTTAAAGGATACATCAATTTAGGCTTCCCACAAAGCTATAGATaGAAATGCTATGTACCACATAACTGTGGCCAACACCCTAAAATG +
Preference number: 2 (lower is better)
Translates to: TFKGYINLGFPQSYR*KCYVPHNCGQHPKM
Trigger: CATTTTAGGGTGTTGGCCACAGTTATGTGGTACATAGCATTTCAATCTATAGCTTTGTGGGAAGCCTAAATTGATGTATCCTTTAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACCTTACAGTTGAGGAATaGTGTGTAATTACTGTCCAT +
Preference number: 2 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHLTVEE*CVITVH
Trigger: ATGGACAGTAATTACACAGCATTCCTCAACTGTAAG...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTATCAAAACCAGTACAATaGACACATATGAAGGTAATG +
Preference number: 2 (lower is better)
Translates to: QSVSKRKDNENVIGRVELSKPVQ*THMKVM
Trigger: CATTACCTTCATATGTGTGCATTGTACTGGTTTTGA...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 72 bp TCTCCAGGCCTAAAGCAATGGGCGATGAAGGCTCAGTaGAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGA +
Preference number: 3 (lower is better)
Translates to: SPGLKQWAMKAQ*SLRWHCATVSG
Trigger: TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CCA 72 bp AAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTaGCACTGTGCAACTGTCTCAGGATGCCATAAACCA +
Preference number: 3 (lower is better)
Translates to: KQWAMKAQCSLR*HCATVSGCHKP
Trigger: TGGTTTATGGCATCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 72 bp TGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTaGGAATCAGAGAACTGTATTATAGCAGCCCTAGTC +
Preference number: 3 (lower is better)
Translates to: CPDNSSLAEHLV*ESENCIIAALV
Trigger: GACTAGGGCTGCTATAATACAGTTCTCTGATTCGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CCA 72 bp AACCTAACTCCTTCCAATGCCCAGACAACAGTTCGCTaGCAGAACATCTGGTGTGCGAATCAGAGAACTGTA +
Preference number: 3 (lower is better)
Translates to: NLTPSNAQTTVR*QNIWCANQRTV
Trigger: TACAGTTCTCTGATTCGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 72 bp GAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTaGATTCCACAGAGCAGCAAGCCCTCCCAGGTATTC +
Preference number: 3 (lower is better)
Translates to: ECCVITVHKNVH*IPQSSKPSQVF
Trigger: GAATACCTGGGAGGGCTTGCTGCTCTGTGGAATGCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CAA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGTTTGAGATTTTCCTATaGGCCCACTTAACCCAGCAC +
Preference number: 3 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWFEIFL*AHLTQH
Trigger: GTGCTGGGTTAAGTGGGCCAATAGGAAAATCTCAAA...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR GCA 72 bp ATCAATTTAGGCTTCCCACAAAGCTATAGATTGAAATaGTATGTACCACATAACTGTGGCCAACACCCTAAA +
Preference number: 3 (lower is better)
Translates to: INLGFPQSYRLK*YVPHNCGQHPK
Trigger: TTTAGGGTGTTGGCCACAGTTATGTGGTACATAGCATTTCAATCTATAGCTTTGTGGGAAGCCTAAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CAA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACATAAGCCCTACAACTTaGAACAGATGCTGTCTAGAT +
Preference number: 3 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHISPTT*NRCCLD
Trigger: ATCTAGACAGCATCTGTTCAAAGTTGTAGGGCTTAT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CAA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAGCTAGTAGTGATGATTaGGTATTGCTGCTTTTGGTT +
Preference number: 3 (lower is better)
Translates to: QSVSKRKDNENVIGRVELASSDD*VLLLLV
Trigger: AACCAAAAGCAGCAATACCAAATCATCACTACTAGC...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR-3UTR CAA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACAGACTGGACAAAATTTaGGAGATTTCATCTCCTAGT +
Preference number: 3 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNRLDKI*EISSPS
Trigger: ACTAGGAGATGAAATCTCCAAAATTTTGTCCAGTCT...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR TCA 72 bp TGCGAATCAGAGAACTGTATTATAGCAGCCCTAGTCTaGGATCCAATATCTAATATCCTTTTAATTTACCAT +
Preference number: 3 (lower is better)
Translates to: CESENCIIAALV*DPISNILLIYH
Trigger: ATGGTAAATTAAAAGGATATTAGATATTGGATCTCAGACTAGGGCTGCTATAATACAGTTCTCTGATTCGCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR TCA 72 bp AGCAATCGTATATTCTTCCATAATGTAATATGCAACTaGGGCGTTATGTTAAATGTATCAAGGAAGAAGCCT +
Preference number: 3 (lower is better)
Translates to: SNRIFFHNVICN*GVMLNVSRKKP
Trigger: AGGCTTCTTCCTTGATACATTTAACATAACGCCTCAGTTGCATATTACATTATGGAAGAATATACGATTGCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCCAGCAGCCGCTTCGATaGATTCTGGCTTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCQQPLR*ILASGS
Trigger: ACTGCCTGAAGCCAGAATGCATCGAAGCGGCTGCTG...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACGGCAGTATCCACCATaGACTTGTAAAGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGRQYPP*TCKGHP
Trigger: GGGATGCCCTTTACAAGTTCATGGTGGATACTGCCG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCGAGGCAGCAAAGTTGTaGTCCCCTGGATTACCCTTG +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCEAAKL*SPGLPL
Trigger: CAAGGGTAATCCAGGGGACCACAACTTTGCTGCCTC...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACTGGAGCTCTCCTGCTaGAAATCGGATCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGLELSC*KSDLVG
Trigger: ACCAACCAGATCCGATTTCCAGCAGGAGAGCTCCAG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACAGACAACAGTTCGCTaGCAGAACATCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGQTTVR*QNIWCA
Trigger: CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCCCTAACTCCTTCCAATaGCCAGACAACAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCPNSFQ*PDNSSL
Trigger: CAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAGG...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCTCCAGCCATCTATACTaGAAGCGCCTGCTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCSSHLY*KRLLRF
Trigger: AAACCTTAGCAGGCGCTTTCAGTATAGATGGCTGGA...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCGAGCTTTGTTCATGCTaGCTTGAACAGGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCELCSC*LEQGNL
Trigger: CAGATTGCCCTGTTCAAGTCAGCATGAACAAAGCTC...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCATGGCTCTCCTCCATTaGACGTGCTTAGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCMALLH*TCLARN
Trigger: ATTCCTTGCTAAGCACGTTCAATGGAGGAGAGCCAT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGAGACAGCTTAAGAAACTaGCGTCAGGAAATCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGDSLRN*RQEISP
Trigger: AGGGGAGATTTCCTGACGGCAGTTTCTTAAGCTGTC...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCCTTCATGTCATGCTCTaGTCTGGAACTGTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCLHVML*SGTVSS
Trigger: GGAGCTAACAGTTCCAGAGCAGAGCATGACATGAAG...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCATCGGATCTGGTTGGTaGATGCACTGTAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCIGSGW*MHCRRH
Trigger: ATGCCTTCTACAGTGCATCCACCAACCAGATCCGAT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACACAGGGACACACAATaGCTTCCTGTGGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGHRDTQ*LPVVNL
Trigger: CAGATTAACCACAGGAAGCCATTGTGTGTCCCTGTG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACCAAAATATTGGTTaGCTTGGCTTTCCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCNQNIG*LGFPPD
Trigger: GTCAGGGGGAAAGCCAAGGCAACCAATATTTTGGTT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACAGTGGCTTGGCATCTaGTTTTTCAATCGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGQWLGI*FFNRFL
Trigger: GAGAAAGCGATTGAAAAAGCAGATGCCAAGCCACTG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCCAGACAGACAATCACTaGAGTTCATACAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCQTDNH*SSYRLD
Trigger: GTCCAGTCTGTATGAACTGCAGTGATTGTCTGTCTG...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGAGCTTCTCCACTTCTCTaGCACAAGCATAATCTGTCT +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGASPLL*HKHNLS
Trigger: AGACAGATTATGCTTGTGCCAGAGAAGTGGAGAAGC...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGAGATATGTTCATTGGATaGTTTGTCATCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGDMFIG*FVIRGH
Trigger: GTGTCCCCTGATGACAAAGCATCCAATGAACATATC...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCACTGACTTCATGTCATaGTCTGCTCTGGAACTGTTA +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCTDFMS*SALELL
Trigger: TAACAGTTCCAGAGCAGAGCATGACATGAAGTCAGT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCCCAGCCAGTCGAACTaGGGAATCATAGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAPSQSN*GIIALS
Trigger: ACTGAGTGCTATGATTCCCCAGTTCGACTGGCTGGG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCATTCAAACGTTCCCATaGCTACAAAAGGACATGGCA +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCIQTFP*LQKDMA
Trigger: TGCCATGTCCTTTTGTAGCCATGGGAACGTTTGAAT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGGGGTCCTCTTCCCCTTaGCATTTAAGCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAGSSSP*HLSQLS
Trigger: AGAAAGCTGGCTTAAATGTCAAGGGGAAGAGGACCC...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACATATCTTCGGGAATTaGATTATTGCTTATCCAGCC +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGHIFGN*IIAYPA
Trigger: GGCTGGATAAGCAATAATCCAATTCCCGAAGATATG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCCTTGGCTTTCCCCCTaGCTAGACAAAACAAACAGT +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAPWLSP*LDKTNS
Trigger: ACTGTTTGTTTTGTCTAGTCAGGGGGAAAGCCAAGG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCCTCATTCATGCAGGATaGATAAAGGATTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCLIHAG*IKDFGF
Trigger: AAAGCCAAAATCCTTTATTCATCCTGCATGAATGAG...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCACACATACAAACGGATaGACACAGAATTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCTHTNG*TQNCCI
Trigger: AATACAGCAATTCTGTGTTCATCCGTTTGTATGTGT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGACACATTTGTCCCATTaGGGCAGCAAAGTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCATHLSH*GSKVVV
Trigger: GACCACAACTTTGCTGCCTCAATGGGACAAATGTGT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAAAATCGCTCTCCTCTaGCTAATGCAGTATAATTGT +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCKIALL*LMQYNC
Trigger: ACAATTATACTGCATTAGTCAGAGGAGAGCGATTTT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCGTCCATCTCATAAAATaGATAAATGAGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCVHLIK*INENRR
Trigger: CCTCCTGTTCTCATTTATTCATTTTATGAGATGGAC...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGAGTGTATGATAGCATGTaGCAAAAATCAGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGVYDSM*QKSVIV
Trigger: GACTATGACTGATTTTTGGCACATGCTATCATACAC...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGAAATCTTTAAAGTACTaGGGGACGCGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAKSLKY*GTRTTT
Trigger: TGTGGTGGTCCGCGTCCCGCAGTACTTTAAAGATTT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCATGAATAAAGGATTTTaGCTTTCTGTATGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCMNKGF*LSVWLR
Trigger: CCGAAGCCATACAGAAAGCCAAAATCCTTTATTCAT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGTGTACATGGCCTCGCTaGTTCGGTTTTCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCACTWPR*FGFHVE
Trigger: TTCCACATGAAAACCGAACCAGCGAGGCCATGTACA...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGTTACTTTACTTAAGATaGCAGCAGCCGCTTCGATGC +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCALLYLR*QQPLRC
Trigger: GCATCGAAGCGGCTGCTGCCATCTTAAGTAAAGTAA...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGAAAGTTGTGGTCCCCTaGATTACCCTTGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAKVVVP*ITLENS
Trigger: GGAATTCTCAAGGGTAATCCAGGGGACCACAACTTT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CAA 72 bp CCTAGTAGCCTTTCTGCGAGCTTTGTTCATGCTGACTaGAACAGGGCAATCTGCTACATCAGATGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PSSLSASFVHAD*NRAICYIRCKL
Trigger: CAGCTTGCATCTGATGTAGCAGATTGCCCTGTTCAAGTCAGCATGAACAAAGCTCGCAGAAAGGCTACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCCCTCCGCTGGCACTGTaGAACTGTCTCAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCPPLAL*NCLRMP
Trigger: TGGCATCCTGAGACAGTTGCACAGTGCCAGCGGAGG...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACGCGATGAAGGCTCAGTaGAGCCTCCGCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHAMKAQ*SLRWHC
Trigger: ACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGC...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CAA 72 bp AAAGCCCAAAGACTACCTTTCCTTCCTGTGGAATACTaGACAAGGGATTTCAGGCTTCTCCACTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KAQRLPFLPVEY*TRDFRLLHFSG
Trigger: GCCAGAGAAGTGGAGAAGCCTGAAATCCCTTGTCAAGTATTCCACAGGAAGGAAAGGTAGTCTTTGGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTCAAGAGCGAGGCGTTaGCATCCAAGGCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCSRARR*HPRLSC
Trigger: GCAAGAAAGCCTTGGATGTCAACGCCTCGCTCTTGA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCCTTTTCGTGGTTTGGTaGCTGGTCTCAAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCLFVVW*LVSRAR
Trigger: CCTCGCTCTTGAGACCAGCCACCAAACCACGAAAAG...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCCGCTTCGATGCATTCTaGCTTCAGGCAGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCRFDAF*LQAVLL
Trigger: CAGGAGTACTGCCTGAAGCCAGAATGCATCGAAGCG...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACTGCCCAGAACTAGGGTaGCACCGACAAACACGACCA +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHCPELG*HRQTRP
Trigger: TGGTCGTGTTTGTCGGTGGCACCCTAGTTCTGGGCA...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACCTAGAAAGAGGATCGTaGCCAGAACTAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHLERGS*PELGCH
Trigger: GTGGCACCCTAGTTCTGGGCACGATCCTCTTTCTAG...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCAGCAAAGTCCCTGTTTaGCAGGCTCTTCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCSKVPV*QALLSS
Trigger: GCTTGAGAGAAGAGCCTGCCAAACAGGGACTTTGCT...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCAGTGCAGCCTCCGCTaGCACTGTGCAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNQCSLR*HCATVS
Trigger: TGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCATTCTCGGAGGGGCTaGTGTCTTTCAGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNHSRRG*CLSDGG
Trigger: ACCCCCATCTGAAAGACATCAGCCCCTCCGAGAATG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCGTTGCTTTATCTTGGTaGTCTCCCTCAGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCVALSW*SPSAKS
Trigger: GGACTTTGCTGAGGGAGAGCACCAAGATAAAGCAAC...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCCAGGGCAATTCGAGTaGCTCTGTTGGCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWPGQFE*LCWPSF
Trigger: GAAAGAAGGCCAACAGAGGCACTCGAATTGCCCTGG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACCAGCGGAAAGGTGAATaGCGTAGGATGTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHQRKGE*RRMCSS
Trigger: ACTGCTACACATCCTACGGCATTCACCTTTCCGCTG...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAGGCCAGGGAGAGTGTTaGTTGGTCCAGCTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELGQGEC*LVQLQD
Trigger: ATCTTGAAGCTGGACCAAGCAACACTCTCCCTGGCC...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCGGCTCCTCAAGTCCCTaGCTTCTGTCATTTATCCAT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCGSSSP*LLSFIH
Trigger: ATGGATAAATGACAGAAGGCAGGGACTTGAGGAGCC...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAGTCGGCAGGAGTCCATaGCTCTGTTCATCGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELVGRSP*LCSSWN
Trigger: ATTCCACGATGAACAGAGGCATGGACTCCTGCCGAC...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCGCCATAGTTCCTAGCTaGTTCTTAGTGATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCAIVPS*FLVMLQ
Trigger: CTGGAGCATCACTAAGAAGCAGCTAGGAACTATGGC...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACTCGTGGTTTGGTGGCTaGTCTCAAGAGCGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNSWFGG*SQERGV
Trigger: AACGCCTCGCTCTTGAGACCAGCCACCAAACCACGA...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCCAGGCCTAAAGCAATaGGCGATGAAGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNPGLKQ*AMKAQC
Trigger: GCACTGAGCCTTCATCGCCCATTGCTTTAGGCCTGG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAACAGGAGGCCAATGCTaGGCACTTAGTGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELTGGQC*ALSEKL
Trigger: GAGCTTTTCACTAAGTGCTCAGCATTGGCCTCCTGT...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTGGATAGCCAACTTTTaGCAAAACAGCTCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCWIANF*QNSSRL
Trigger: AAGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCCTGTCCATAAAAACGTaGACTGCATTCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCLSIKT*TAFHRA
Trigger: TGCTCTGTGGAATGCAGTGCACGTTTTTATGGACAG...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCAGTGTTGCTTTATCTTaGTGCTCTCCCTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCSVALS*CSPSAK
Trigger: CTTTGCTGAGGGAGAGCACCAAGATAAAGCAACACT...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTATTCGAGTGCCTCTGTTaGCCTTCTTTCCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELFECLC*PSFQSP
Trigger: TGGAGACTGGAAAGAAGGCCAACAGAGGCACTCGAA...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGTTTTGGCTTTCTGTATaGCTTCGGTGTCCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWFWLSV*LRCPAF
Trigger: GAAGGCGGGACACCGAAGCCATACAGAAAGCCAAAA...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCG +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCCVAVA*HLLFQS
Trigger: CGATTGAAAAAGCAGATGCCAAGCCACTGCTACACA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCAGGGAGAGTGTTGCTTaGTCCAGCTTCAAGATATGT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCRESVA*SSFKIC
Trigger: ACATATCTTGAAGCTGGACCAAGCAACACTCTCCCT...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACTTCTCGGGCAGCTTCTaGTCTGTAGGAATTGCACCT +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHFSGSF*SVGIAP
Trigger: AGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAA...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCACAGAATTGCTGTATTaGCCACGAAACGTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCTELLY*PRNVAS
Trigger: ACTTGCAACGTTTCGTGGTCAATACAGCAATTCTGT...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCCCCTGGATTACCCTTaGGAATTCCAGCCATCTATA +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWPLDYP*EFQPSI
Trigger: TATAGATGGCTGGAATTCTCAAGGGTAATCCAGGGG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCATCAGATGCAAGCTGTaGGACACAGTTTCATTCCAA +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCIRCKL*DTVSFQ
Trigger: TTGGAATGAAACTGTGTCTCACAGCTTGCATCTGAT...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACAACGTTGCAAGTGTCTaGAGAAGGCTGAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHNVASV*RRLNFL
Trigger: GAGAAAGTTCAGCCTTCTGCAGACACTTGCAACGTT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACTTGACCACGAAACGTTaGAAGTGTCTGCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHLTTKR*KCLQKA
Trigger: AGCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAA...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAGATCTGGTTGGTGGATaGACTGTAGAAGGCATTGAC +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELDLVGG*TVEGID
Trigger: GTCAATGCCTTCTACAGTGCATCCACCAACCAGATC...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCTTCTGGAGCTCTCCTaGTGGAAATCGGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNLLELS*WKSDLV
Trigger: AACCAGATCCGATTTCCAGCAGGAGAGCTCCAGAAG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACGGAGGACAAGGTAGCTaGCCTTCACAAGTTTATCCA +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHGGQGS*PSQVYP
Trigger: TGGATAAACTTGTGAAGGGCAGCTACCTTGTCCTCC...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCGTGCTTAGCAAGGAATaGCAAAATCCTGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCVLSKE*QNPVFS
Trigger: AGAGAAGACAGGATTTTGGCATTCCTTGCTAAGCAC...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCGCAGAACATCTGGTGTaGGAATCAGAGAACTGTATT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCAEHLV*ESENCI
Trigger: AATACAGTTCTCTGATTCGCACACCAGATGTTCTGC...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACTCACTTTTCGTGGTTTaGTGGCTGGTCTCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNSLFVV*WLVSRA
Trigger: CGCTCTTGAGACCAGCCACCAAACCACGAAAAGTGA...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAGAAATCGGATCTGGTTaGTGGATGCACTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELEIGSG*WMHCRR
Trigger: CCTTCTACAGTGCATCCACCAACCAGATCCGATTTC...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCGCTGGCAGAACATCTaGTGTGCGAATCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNRWQNI*CANQRT
Trigger: AGTTCTCTGATTCGCACACCAGATGTTCTGCCAGCG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACAAGCTCAGTACACTTTaGGCAATGGTCATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHKLSTL*AMVMSP
Trigger: TGGGCTCATGACCATTGCCCAAAGTGTACTGAGCTT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACTGTCCCGCCTTCTACTaGTTGATTTCTCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHCPAFY*LISPKV
Trigger: AACTTTTGGAGAAATCAATCAGTAGAAGGCGGGACA...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTATCTCCCTCCTCAATGTaGTGTTTGTTCCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELSPSSM*CLFLCT
Trigger: AGTGCAAAGGAACAAACATCACATTGAGGAGGGAGA...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACGAGTTTGTAGGACGTTaGCAAAGTAGTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNEFVGR*QSSRLL
Trigger: CAGAAGCCGACTACTTTGGCAACGTCCTACAAACTC...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTACTGGTCTGTAGGAATTaGACCTCACATGAGCATAAC +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELLVCRN*TSHEHN
Trigger: GTTATGCTCATGTGAGGTGCAATTCCTACAGACCAG...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTACATAAAAACGTGCACTaGATTCCACAGAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELHKNVH*IPQSSK
Trigger: CTTGCTGCTCTGTGGAATGCAGTGCACGTTTTTATG...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGTTGAACAGGGCAATCTaGTACATCAGATGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWLNRAI*YIRCKL
Trigger: CAGCTTGCATCTGATGTAGCAGATTGCCCTGTTCAA...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGGAAAGTCACTTTTCGTaGTTTGGTGGCTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWESHFS*FGGWSQ
Trigger: TTGAGACCAGCCACCAAACCACGAAAAGTGACTTTC...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACGCGCCTGCTAAGGTTTaGAATTCTGGAATAAACCAT +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHAPAKV*NSGINH
Trigger: ATGGTTTATTCCAGAATTCCAAACCTTAGCAGGCGC...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACCTCAGGAAGAAGAGCTaGTTGTTGGTGAATGTGATG +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHLRKKS*LLVNVM
Trigger: CATCACATTCACCAACAACCAGCTCTTCTTCCTGAG...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CAA 72 bp GGATACATCAATTTAGGCTTCCCACAAAGCTATAGATaGAAATGCTATGTACCACATAACTGTGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: GYINLGFPQSYR*KCYVPHNCGQH
Trigger: GTGTTGGCCACAGTTATGTGGTACATAGCATTTCAATCTATAGCTTTGTGGGAAGCCTAAATTGATGTATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACTTGTTCTGCTTTGTTTaGGTAATGGACATCCTACCT +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHLFCFV*VMDILP
Trigger: AGGTAGGATGTCCATTACTCAAACAAAGCAGAACAA...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACATAGCAGCCCTAGTCTaGGATCCAATATCTAATATC +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHIAALV*DPISNI
Trigger: GATATTAGATATTGGATCTCAGACTAGGGCTGCTAT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCATCCAAGGCTTTCTTaGTCTTCTACTAATGGACAG +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWHPRLS*SSTNGQ
Trigger: CTGTCCATTAGTAGAAGAGCAAGAAAGCCTTGGATG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACTTTCCTTTTCGTTCCTaGATCCATCCACTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHFPFRS*IHPLIF
Trigger: GAAAATGAGTGGATGGATGCAGGAACGAAAAGGAAA...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGACTGTGCTAAATACTTaGGAGTTTGTAGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWTVLNT*EFVGRC
Trigger: GCAACGTCCTACAAACTCGCAAGTATTTAGCACAGT...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTATGAATCCTGTGTTTaGATTAGTGATGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCYESCV*ISDVQV
Trigger: GACTTGGACATCACTAATGCAAACACAGGATTCATA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACCATCCCGATAAGACTTaGCTTCTGTACTGTTATCAA +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHHPDKT*LLYCYQ
Trigger: TTGATAACAGTACAGAAGCCAAGTCTTATCGGGATG...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTACCAAATAGTTGGCAATaGTCTTCTTTCTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELPNSWQ*SSFSQT
Trigger: GGTCTGAGAGAAAGAAGACCATTGCCAACTATTTGG...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCATCGTGGAATTGGGTaGACAGTTAAAAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWHRGIG*TVKSFL
Trigger: CAGAAAGCTTTTAACTGTCCACCCAATTCCACGATG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTTTTGTAAAACTTCATaGCTCTCCTCCATTGAACGT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCFCKTS*LSSIER
Trigger: ACGTTCAATGGAGGAGAGCCATGAAGTTTTACAAAA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379374.5
3UTR CAA 72 bp TTCATTCTTATATTCCACTTTATAAGCCCTACAACTTaGAACAGATGCTGTCTAGATCCAAGCAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: FILIFHFISPTT*NRCCLDPSRSP
Trigger: AGGTGACCTGCTTGGATCTAGACAGCATCTGTTCAAAGTTGTAGGGCTTATAAAGTGGAATATAAGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACATCATTCTGCTTGCCTaGATTGTCTTCATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHIILLA*IVFIKD
Trigger: ATCTTTGATGAAGACAATTCAGGCAAGCAGAATGAT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCCGCCTTCTACTGATTaGTTTCTCCAAAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNPPSTD*FLQKFL
Trigger: AAGGAACTTTTGGAGAAATCAATCAGTAGAAGGCGG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACAAAGTAGTCGGCTTCTaGAAACTTGATAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHKVVGF*KLDSFE
Trigger: CTCAAAGCTATCAAGTTTTCAGAAGCCGACTACTTT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACATAATTGTTTCCTCATaGTGGTGCCCCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHIIVSS*WCPSIF
Trigger: AAAAATGGAGGGGCACCATCATGAGGAAACAATTAT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGTGCTTTAAGCTCCATTaGGGCAAGGCACTAAATAAA +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWCFKLH*GKALNK
Trigger: TTTATTTAGTGCCTTGCCTCAATGGAGCTTAAAGCA...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCGGGAATTGGATTATTaGTTATCCAGCCATCACAAG +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNRELDY*LSSHHK
Trigger: CTTGTGATGGCTGGATAAGCAATAATCCAATTCCCG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTCGCTTTCTCATTCATaGAGGATGAATAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: YLTVEECCVITVHKNVHCSLSHS*RMNKGF
Trigger: AAATCCTTTATTCATCCTGCATGAATGAGAAAGCGA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACACTAGGAGGTTTTGCTaGTTCTGGGACCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNTRRFC*FWDLKI
Trigger: TATCTTTAGGTCCCAGAAGCAGCAAAACCTCCTAGT...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGTCCACACCAAATAGTTaGCAATGGTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWSTPNS*QWSSFS
Trigger: AGAGAAAGAAGACCATTGCCAACTATTTGGTGTGGA...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCATAAAATGAATAAATaGGAACAGGAGGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWHKMNK*EQEANA
Trigger: AGCATTGGCCTCCTGTTCTCATTTATTCATTTTATG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACAAGAATCATTCTGCTTaGCTGAATTGTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: GNNFKAITILSYTHTHTHKNHSA*LNCLHQ
Trigger: TTGATGAAGACAATTCAGGCAAGCAGAATGATTCTT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTACTTACAGTTGAGGAATaGTGTGTAATTACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELLTVEE*CVITVH
Trigger: ATGGACAGTAATTACACAGCATTCCTCAACTGTAAG...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAGTTCCTAGGATATCCTaGAGCATTTTATTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QSVSKRKDNENVIGRVELVPRIS*SILFQE
Trigger: TTCCTGAAATAAAATGCTCCAGGATATCCTAGGAAC...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGGGTTCGGTTTTCATGTaGAATCATTATCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWGSVFM*NHYLSY
Trigger: ATAGCTGAGATAATGATTCCACATGAAAACCGAACC...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR TCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACAAAGTTCCTTCAACTTaGGGTCAACATTATGTCTCA +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNKVPST*GQHYVS
Trigger: TGAGACATAATGTTGACCTCAAGTTGAAGGAACTTT...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACTTCAAAGTTACTAATTaGACCATTGACCCTAAACTG +
Preference number: 4 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHFKVTN*TIDPKL
Trigger: CAGTTTAGGGTCAATGGTGCAATTAGTAACTTTGAA...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACTTGTTTTATCAAAACTaGATTCTCGTGAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNLFYQN*ILVKLP
Trigger: GGGGAGTTTCACGAGAATCCAGTTTTGATAAAACAA...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCTAGTAGTGATGATTTaGTATTGCTGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWLVVMI*YCCFWF
Trigger: AAACCAAAAGCAGCAATACCAAATCATCACTACTAG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR GCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACTCAAAACCAGTACAATaGACACATATGAAGGTAATG +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNSKPVQ*THMKVM
Trigger: CATTACCTTCATATGTGTGCATTGTACTGGTTTTGA...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CCA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACGACTGGACAAAATTTTaGAGATTTCATCTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNDWTKF*RFHLLV
Trigger: AACTAGGAGATGAAATCTCCAAAATTTTGTCCAGTC...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 90 bp AAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGATaGCATAAACCAGCGTCCCAGCTACCAGAGTCGGCAGGAGTCCAT +
Preference number: 5 (lower is better)
Translates to: KAQCSLRWHCATVSG*HKPASQLPESAGVH
Trigger: ATGGACTCCTGCCGACTCTGGTAGCTGGGACGCTGGTTTATGGCATCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000683162.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS-3UTR CAA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACTCAAGAGCGAGGCGTaGACATCCAAGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGLKSEA*TSKAFL
Trigger: CAAGAAAGCCTTGGATGTCAACGCCTCGCTCTTGAG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 90 bp CCAGAACTAGGGTGCCACCGACAAACACGACCAGGGCAATTCGAGTaGCTCTGTTGGCCTTCTTTCCAGTCTCCACGCTGCTCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PELGCHRQTRPGQFE*LCWPSFQSPRCSLF
Trigger: AAACAGGGAGCAGCGTGGAGACTGGAAAGAAGGCCAACAGAGGCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCACCCTAGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS-3UTR CAA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGAGCTCTCGCCTTTTCTTaGGCTTTCCTTTTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGALAFS*AFLFVP
Trigger: AGGAACGAAAAGGAAAGCCAAAGAAAAGGCGAGAGC...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAAGAAGAGCTGGTTGTaGGTGAATGTGATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCKKSWL*VNVMPG
Trigger: ACCAGGCATCACATTCACCAACAACCAGCTCTTCTT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 90 bp AGAGACCTTGACTCACTAGAAAGAGGATCGTGCCCAGAACTAGGGTaGCACCGACAAACACGACCAGGGCAATTCGAGTGCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: RDLDSLERGSCPELG*HRQTRPGQFECLCW
Trigger: CCAACAGAGGCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCACCCTAGTTCTGGGCACGATCCTCTTTCTAGTGAGTCAAGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS-3UTR CAA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGAAAAATATTGGTTGCCTaGGCTTTCCCCCTGACTAGA +
Preference number: 5 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGKILVA*AFPLTR
Trigger: TCTAGTCAGGGGGAAAGCCAAGGCAACCAATATTTT...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGACACAGAATTGCTGTATaGACCACGAAACGTTGCAAG +
Preference number: 5 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGHRIAV*TTKRCK
Trigger: CTTGCAACGTTTCGTGGTCAATACAGCAATTCTGTG...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCGACTGTGCTAAATACTaGCGAGTTTGTAGGACGTTG +
Preference number: 5 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCDCAKY*RVCRTL
Trigger: CAACGTCCTACAAACTCGCAAGTATTTAGCACAGTC...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGATTTGTTCATGCTGACTaGAACAGGGCAATCTGCTAC +
Preference number: 5 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGFVHAD*NRAICY
Trigger: GTAGCAGATTGCCCTGTTCAAGTCAGCATGAACAAA...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS CCA 90 bp ATCAGAAGGGCCGTAGAGAGCACACGAGAAGAAAGTCACTTTTCGTaGTTTGGTGGCTGGTCTCAAGAGCGAGGCGTTGACATCCAAGGC +
Preference number: 5 (lower is better)
Translates to: IRRAVESTREESHFS*FGGWSQERGVDIQG
Trigger: GCCTTGGATGTCAACGCCTCGCTCTTGAGACCAGCCACCAAACCACGAAAAGTGACTTTCTTCTCGTGTGCTCTCTACGGCCCTTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS CCA 90 bp CGGGCCAGCGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCGCTTCTAGAAAGAGGATCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: RASGKVNAVGCVAVA*HLLFQSLLERGSCP
Trigger: TGGGCACGATCCTCTTTCTAGAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683214.1
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCAGCAAAGTCCCTGTTaGGCAGGCTCTTCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAQQSPC*AGSSLK
Trigger: CTTGAGAGAAGAGCCTGCCAAACAGGGACTTTGCTG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGGTCACTTTTCGTGGTTaGGTGGCTGGTCTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAVTFRG*VAGLKS
Trigger: GCTCTTGAGACCAGCCACCAAACCACGAAAAGTGAC...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGACTGTGAGCACCAATTaGGACTTGTTCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCATVSTN*DLFSGS
Trigger: GCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 90 bp CTTTTTCAATCGCTTCTAGAAAGAGGATCGTGCCCAGAACTAGGGTaGCACCGACAAACACGACCAGGGCAATTCGAGTGCCTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LFQSLLERGSCPELG*HRQTRPGQFECLCW
Trigger: CCAACAGAGGCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCACCCTAGTTCTGGGCACGATCCTCTTTCTAGAAGCGATTGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683214.1
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCTGGATAGCCAACTTTaGCCAAAACAGCTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCALDSQL*PKQLSP
Trigger: AGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp TGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGATTGTCCTTAAAATGCTaGTTCACATCGTTTCACGAG +
Preference number: 5 (lower is better)
Translates to: WAMKAQCSLRWHCATVSGLSLKC*FTSFHE
Trigger: CTCGTGAAACGATGTGAACAAGCATTTTAAGGACAA...TCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGAGGAAGAAGAGCTGGTaGTTGGTGAATGTGATGCCT +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCARKKSW*LVNVMP
Trigger: AGGCATCACATTCACCAACAACCAGCTCTTCTTCCT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCAGACTGGACAAAATTTaGGAGATTTCATCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCRLDKI*EISSPS
Trigger: ACTAGGAGATGAAATCTCCAAAATTTTGTCCAGTCT...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp AGGCCTAAAGCAATGGGCGATGAAGGCTCAGTGCAGCCTCCGCTGGCACTGTGCCTGGTGATGAGAATGTaGTTATATGAAGCAATCGTA +
Preference number: 5 (lower is better)
Translates to: RPKAMGDEGSVQPPLALCLVMRM*LYEAIV
Trigger: TACGATTGCTTCATATAACAACATTCTCATCACCAG...GCACAGTGCCAGCGGAGGCTGCACTGAGCCTTCATCGCCCATTGCTTTAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS TCA 90 bp ACCACGAAACGTTGCAAGTGTCTGCAGAAGGCTGAACTTTCTCTCTaGCCAAACCCCTTCAGGGCCAATATTAGATTCAAGCACGGGCCA +
Preference number: 5 (lower is better)
Translates to: TTKRCKCLQKAELSL*PNPFRANIRFKHGP
Trigger: TGGCCCGTGCTTGAATCTAATATTGGCCCTGAAGGGGTTTGGTCAGAGAGAAAGTTCAGCCTTCTGCAGACACTTGCAACGTTTCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS GCA 90 bp TCAGGGCCAATATTAGATTCAAGCACGGGCCAGCGGAAAGGTGAATaGCGTAGGATGTGTAGCAGTGGCTTGGCATCTGCTTTTTCAATC +
Preference number: 5 (lower is better)
Translates to: SGPILDSSTGQRKGE*RRMCSSGLASAFSI
Trigger: GATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCGTGCTTGAATCTAATATTGGCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS CCA 90 bp GTAGAGAGCACACGAGAAGAAAGTCACTTTTCGTGGTTTGGTGGCTaGTCTCAAGAGCGAGGCGTTGACATCCAAGGCTTTCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VESTREESHFSWFGG*SQERGVDIQGFLAL
Trigger: AAGAGCAAGAAAGCCTTGGATGTCAACGCCTCGCTCTTGAGACCAGCCACCAAACCACGAAAAGTGACTTTCTTCTCGTGTGCTCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS CCA 90 bp CGGGCCAGCGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCGCTTTCTCATTCATGCAGGATGAAT +
Preference number: 5 (lower is better)
Translates to: RASGKVNAVGCVAVA*HLLFQSLSHSCRMN
Trigger: ATTCATCCTGCATGAATGAGAAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379374.5
ENST00000475778.2
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGTTTGAGATTTTCCTATaGGCCCACTTAACCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAFEIFL*AHLTQH
Trigger: GTGCTGGGTTAAGTGGGCCAATAGGAAAATCTCAAA...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCTTCCTGTGGAATACTaGACAAGGGATTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCALPVEY*TRDFRL
Trigger: AAGCCTGAAATCCCTTGTCAAGTATTCCACAGGAAG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS TCA 90 bp CTCGCCCTTCACGGGAGCAGAGGCATCCTCATTTATCTTTTACAGTaGACACCCCTAGCAAAGAGTACAACAAAGCCACATCCACACACT +
Preference number: 5 (lower is better)
Translates to: LALHGSRGILIYLLQ*TPLAKSTTKPHPHT
Trigger: AGTGTGTGGATGTGGCTTTGTTGTACTCTTTGCTAGGGGTGTTCACTGTAAAAGATAAATGAGGATGCCTCTGCTCCCGTGAAGGGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CCA 90 bp CGGGCCAGCGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCGTCTCATTCATGCAGGATGAATAAA +
Preference number: 5 (lower is better)
Translates to: RASGKVNAVGCVAVA*HLLFQSSHSCRMNK
Trigger: TTTATTCATCCTGCATGAATGAGACGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000684143.1
ENST00000684745.1
CDS CCA 90 bp GCCACGTCGTTGCCGTGTCTCCACCACTTGTTGACCACAGCTAATTaGACCAAAAGTAGACACTTAACTCAGGGAAACCAATTCAGAACC +
Preference number: 5 (lower is better)
Translates to: ATSLPCLHHLLTTAN*TKSRHLTQGNQFRT
Trigger: GGTTCTGAATTGGTTTCCCTGAGTTAAGTGTCTACTTTTGGTCCAATTAGCTGTGGTCAACAAGTGGTGGAGACACGGCAACGACGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS TCA 90 bp AAGTCACTTTTCGTGGTTTGGTGGCTGGTCTCAAGAGCGAGGCGTTaGCATCCAAGGCTTTCTTGCTCTTCTACTAATGGACAGCTTAAG +
Preference number: 5 (lower is better)
Translates to: KSLFVVWWLVSRARR*HPRLSCSSTNGQLK
Trigger: CTTAAGCTGTCCATTAGTAGAAGAGCAAGAAAGCCTTGGATGTCAACGCCTCGCTCTTGAGACCAGCCACCAAACCACGAAAAGTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCAAGAATCATTCTGCTaGCCTGAATTGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAQESFC*PELSSS
Trigger: TGATGAAGACAATTCAGGCAAGCAGAATGATTCTTG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGATAAGCCCTACAACTTaGAACAGATGCTGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAISPTT*NRCCLD
Trigger: ATCTAGACAGCATCTGTTCAAAGTTGTAGGGCTTAT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGGCTAGTAGTGATGATTaGGTATTGCTGCTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAASSDD*VLLLLV
Trigger: AACCAAAAGCAGCAATACCAAATCATCACTACTAGC...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 90 bp TTCTTTCTCTCAGACCCTAATATCCTAAACAAATCTTTAAAGTACTaGGGGACGCGGACCACCACATTCTCGGAGGGGCTGATGTCTTTC +
Preference number: 5 (lower is better)
Translates to: FFLSDPNILNKSLKY*GTRTTTFSEGLMSF
Trigger: GAAAGACATCAGCCCCTCCGAGAATGTGGTGGTCCGCGTCCCGCAGTACTTTAAAGATTTGTTTAGGATATTAGGGTCTGAGAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGAAAAGTTCCTTCAACTaGAGGTCAACATTATGTCTC +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAKSSFN*RSTLCL
Trigger: GAGACATAATGTTGACCTCAAGTTGAAGGAACTTTT...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CTAACTCCTTCCAATGCCCAGACAACAGTTCGCTGGCAGAACATCTGGTGTGCGCACATGTCTTCATCATaGAGAGGCTACAAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: LTPSNAQTTVRWQNIWCAHMSSS*RGYKFN
Trigger: ATTAAACTTGTAGCCTCTCAATGATGAAGACATGTG...CGCACACCAGATGTTCTGCCAGCGAACTGTTGTCTGGGCATTGGAAGGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS TCA 90 bp TCATCAGGGGACACATACAAACGGATGAACACAGAATTGCTGTATTaGCCACGAAACGTTGCAAGTGTCTGCAGAAGGCTGAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: SSGDTYKRMNTELLY*PRNVASVCRRLNFL
Trigger: GAGAAAGTTCAGCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS GCA 90 bp ATCCAAGGCTTTCTTGCTCTTCTACTAATGGACAGCTTAAGAAACTaGCGTCAGGAAATCTCCCCTCGCCACCCTTTCTCAAATAATTCT +
Preference number: 5 (lower is better)
Translates to: IQGFLALLLMDSLRN*RQEISPRHPFSNNS
Trigger: AGAATTATTTGAGAAAGGGTGGCGAGGGGAGATTTCCTGACGGCAGTTTCTTAAGCTGTCCATTAGTAGAAGAGCAAGAAAGCCTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS CCA 90 bp TCTCAGCCAAGGATAAACCCCATAGCTTGGCATATCTTCGGGAATTaGATTATTGCTTATCCAGCCATCACAAGCGAACCGGAAGAAATT +
Preference number: 5 (lower is better)
Translates to: SQPRINPIAWHIFGN*IIAYPAITSEPEEI
Trigger: AATTTCTTCCGGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACATTCGAGTGCCTCTGTaGGCCTTCTTTCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHIRVPL*AFFPVS
Trigger: GGAGACTGGAAAGAAGGCCAACAGAGGCACTCGAAT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCCAGGGAGAGTGTTGCTaGGTCCAGCTTCAAGATATG +
Preference number: 5 (lower is better)
Translates to: YLTVEECCVITVHKNVHCQGECC*VQLQDM
Trigger: CATATCTTGAAGCTGGACCAAGCAACACTCTCCCTG...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACCGGCCAGGGAGAGTGTaGCTTGGTCCAGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNRPGRV*LGPASR
Trigger: TCTTGAAGCTGGACCAAGCAACACTCTCCCTGGCCG...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACAGCACCAATTTGGACTaGTTCTCGGGCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHSTNLD*FSGSFW
Trigger: CCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS TCA 90 bp CATGCTGACTTGAACAGGGCAATCTGCTACATCAGATGCAAGCTGTaGGACACAGTTTCATTCCAACAGACTCCAAAGCCAAATAATGAA +
Preference number: 5 (lower is better)
Translates to: HADLNRAICYIRCKL*DTVSFQQTPKPNNE
Trigger: TTCATTATTTGGCTTTGGAGTCTGTTGGAATGAAACTGTGTCTCACAGCTTGCATCTGATGTAGCAGATTGCCCTGTTCAAGTCAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683917.1
CDS GCA 90 bp GAACGGCTTTTCTTAGCCAGAAGAAATCAGACTGTGCTAAATACTTaGGAGTTTGTAGGACGTTGCCAAAGTAGTCGGCTTCTGAAAACT +
Preference number: 5 (lower is better)
Translates to: ERLFLARRNQTVLNT*EFVGRCQSSRLLKT
Trigger: AGTTTTCAGAAGCCGACTACTTTGGCAACGTCCTACAAACTCGCAAGTATTTAGCACAGTCTGATTTCTTCTGGCTAAGAAAAGCCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379374.5
ENST00000682888.1
ENST00000683162.1
ENST00000683289.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CCA 90 bp CTTGAGGTCAACATTATGTCTCAGCCAAGGATAAACCCCATAGCTTaGCATATCTTCGGGAATTGGATTATTGCTTATCCAGCCATCACA +
Preference number: 5 (lower is better)
Translates to: LEVNIMSQPRINPIA*HIFGNWIIAYPAIT
Trigger: TGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGACATAATGTTGACCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CCA 90 bp TTGTGTCCTAAGATCAGGTGTTGTAGTTTAGTCCCTGCTGGAAGGTaGTTTCTCCAAACCTCAGGAAAACCATGTCTTCTTCATCTTATC +
Preference number: 5 (lower is better)
Translates to: LCPKIRCCSLVPAGR*FLQTSGKPCLLHLI
Trigger: GATAAGATGAAGAAGACATGGTTTTCCTGAGGTTTGGAGAAACCACCTTCCAGCAGGGACTAAACTACAACACCTGATCTTAGGACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS-3UTR CAA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACATTGAGGCAGCAAAGTaGTGGTCCCCTGGATTACCC +
Preference number: 5 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHIEAAK*WSPGLP
Trigger: GGGTAATCCAGGGGACCACAACTTTGCTGCCTCAAT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACAAAGCTCAGTACACTTaGGGCAATGGTCATGAGCCC +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHKAQYT*GNGHEP
Trigger: GGGCTCATGACCATTGCCCAAAGTGTACTGAGCTTT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS TCA 90 bp TATGTTCATTGGATGCTTTGTCATCAGGGGACACATACAAACGGATaGACACAGAATTGCTGTATTGACCACGAAACGTTGCAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: YVHWMLCHQGTHTNG*TQNCCIDHETLQVS
Trigger: AGACACTTGCAACGTTTCGTGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGACAAAGCATCCAATGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS GCA 90 bp AAGGATAAACCCCATAGCTTGGCATATCTTCGGGAATTGGATTATTaGTTATCCAGCCATCACAAGCGAACCGGAAGAAATTATCACAAG +
Preference number: 5 (lower is better)
Translates to: KDKPHSLAYLRELDY*LSSHHKRTGRNYHK
Trigger: CTTGTGATAATTTCTTCCGGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CCA 90 bp CATTTGTTATCATTGCAGCAAGTAAATTACACCAGACAGTGCTTTTaGCCAGTTCATCACAAAGGACACCGGGATTTTCCCTATGACTCT +
Preference number: 5 (lower is better)
Translates to: HLLSLQQVNYTRQCF*PVHHKGHRDFPYDS
Trigger: AGAGTCATAGGGAAAATCCCGGTGTCCTTTGTGATGAACTGGCCAAAAGCACTGTCTGGTGTAATTTACTTGCTGCAATGATAACAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475778.2
CDS CCA 90 bp AGCTTTGAGGTCTTCATTAACATGAGTATCATTCATTATAAACTCTaGATAGCCAACTTTTGCCAAAACAGCTCTCGCCTGCCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: SFEVFINMSIIHYKL*IANFCQNSSRLPGS
Trigger: TGAACCGGGCAGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACTCATGTTAATGAAGACCTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682888.1
ENST00000683162.1
CDS CCA 90 bp AGCTTTGAGGTCTTCATTAACATGAGTATCATTCATTATAAACTCTaGATAGCCAACTTTTGCCAAAACAGCTCTCGCCCTTCACGGGAG +
Preference number: 5 (lower is better)
Translates to: SFEVFINMSIIHYKL*IANFCQNSSRPSRE
Trigger: CTCCCGTGAAGGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACTCATGTTAATGAAGACCTCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS-3UTR CAA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCGATAAACCCCATAGCTaGGCATATCTTCGGGAATTG +
Preference number: 5 (lower is better)
Translates to: YLTVEECCVITVHKNVHCDKPHS*AYLREL
Trigger: CAATTCCCGAAGATATGCCAAGCTATGGGGTTTATC...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp CAATCGGTATCCAAGAGAAAGGACAATGAGAATGTAATTGGAAGAGTTGAGTTAATTGACCACGAAACGTaGCAAGTGTCTGCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: QSVSKRKDNENVIGRVELIDHET*QVSAEG
Trigger: GCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAAT...TAACTCAACTCTTCCAATTACATTCTCATTGTCCTTTCTCTTGGATACCGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS CCA 90 bp AGCTTTGAGGTCTTCATTAACATGAGTATCATTCATTATAAACTCTaGATAGCCAACTTTTGCCAAAACAGCTCTCGCCAGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SFEVFINMSIIHYKL*IANFCQNSSRQEEQ
Trigger: CTGCTCTTCCTGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACTCATGTTAATGAAGACCTCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683917.1
CDS CCA 90 bp AGCTTTGAGGTCTTCATTAACATGAGTATCATTCATTATAAACTCTaGATAGCCAACTTTTGCCAAAACAGCTCTCGCCTGGGTAGTTCC +
Preference number: 5 (lower is better)
Translates to: SFEVFINMSIIHYKL*IANFCQNSSRLGSS
Trigger: GGAACTACCCAGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACTCATGTTAATGAAGACCTCAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684356.1
CDS-3UTR CAA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCAGTGTTGCTTTATCTaGGTGCTCTCCCTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWQCCFI*VLSLSK
Trigger: TTTGCTGAGGGAGAGCACCAAGATAAAGCAACACTG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACTACACATTTGTCCCATaGAGGCAGCAAAGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHYTFVP*RQQSCG
Trigger: ACCACAACTTTGCTGCCTCAATGGGACAAATGTGTA...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACGAAATGTTCATTTTGTaGTACATGGCCTCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHEMFIL*YMASLV
Trigger: AACCAGCGAGGCCATGTACAACAAAATGAACATTTC...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGCTGTTCATCGTGGAATaGGGTGGACAGTTAAAAGCT +
Preference number: 5 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWLFIVE*GGQLKA
Trigger: AGCTTTTAACTGTCCACCCAATTCCACGATGAACAG...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp TACCTTACAGTTGAGGAATGCTGTGTAATTACTGTCCATAAAAACGTGCACTGCTTCTGCTTGCCTGAATaGTCTTCATCAAAGATATTC +
Preference number: 5 (lower is better)
Translates to: YLTVEECCVITVHKNVHCFCLPE*SSSKIF
Trigger: GAATATCTTTGATGAAGACAATTCAGGCAAGCAGAA...GCAGTGCACGTTTTTATGGACAGTAATTACACAGCATTCCTCAACTGTAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACATAAAAACCAAAATATaGGTTGCCTTGGCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHIKTKI*VALAFP
Trigger: GGGGAAAGCCAAGGCAACCAATATTTTGGTTTTTAT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp AAAACACATAATCCAAGAATATCTTTCTTCAAACCAGTAGGACACTGTCACTGGTCGGGAATTGGATTATaGCTTATCCAGCCATCACAA +
Preference number: 5 (lower is better)
Translates to: KTHNPRISFFKPVGHCHWSGIGL*LIQPSQ
Trigger: TTGTGATGGCTGGATAAGCAATAATCCAATTCCCGA...CCAGTGACAGTGTCCTACTGGTTTGAAGAAAGATATTCTTGGATTATGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp ACAGTTACAGCAAGTAAAGTTAATCAGGATAAGGTAAGCTTCTCATCTAGAAACTGTTCATTGGATGCTTaGTCATCAGGGGACACATAC +
Preference number: 5 (lower is better)
Translates to: TVTASKVNQDKVSFSSRNCSLDA*SSGDTY
Trigger: GTATGTGTCCCCTGATGACAAAGCATCCAATGAACA...GTTTCTAGATGAGAAGCTTACCTTATCCTGATTAACTTTACTTGCTGTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 90 bp TCTCCAAACCTCAGGAAAACCATGTCTTCTTCATCTTATCCACAGTaGTCAGCATTATACAAAGAGCTCTTCAATACCTTGATTCATAAA +
Preference number: 5 (lower is better)
Translates to: SPNLRKTMSSSSYPQ*SALYKELFNTLIHK
Trigger: TTTATGAATCAAGGTATTGAAGAGCTCTTTGTATAATGCTGAGCACTGTGGATAAGATGAAGAAGACATGGTTTTCCTGAGGTTTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS-3UTR CAA 90 bp AAATGCCAGGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACAATCACCAACCAGTTTaGCTAAACCAACAAGTGACT +
Preference number: 5 (lower is better)
Translates to: KCQVTTLRPLQFYPTHTHNHQPV*LNQQVT
Trigger: AGTCACTTGTTGGTTTAGCAAAACTGGTTGGTGATT...GTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACCTGGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS-3UTR CAA 90 bp GGTAACAACTTTAAGGCCATTACAATTTTATCCTACACACACACACACACACACAGTGATGATTTGGTATaGCTGCTTTTGGTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: GNNFKAITILSYTHTHTHSDDLV*LLLVCC
Trigger: ACAACAAACCAAAAGCAGCAATACCAAATCATCACT...GTGTGTGTGTGTGTGTGTGTAGGATAAAATTGTAATGGCCTTAAAGTTGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS GCA 72 bp GGGTGCCACCGACAAACACGACCAGGGCAATTCGAGTaGCTCTGTTGGCCTTCTTTCCAGTCTCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: GCHRQTRPGQFE*LCWPSFQSPRC
Trigger: GCAGCGTGGAGACTGGAAAGAAGGCCAACAGAGGCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS GCA 72 bp TGCAGCCTCCGCTGGCACTGTGCAACTGTCTCAGGATaGCATAAACCAGCGTCCCAGCTACCAGAGTCGGCA +
Preference number: 6 (lower is better)
Translates to: CSLRWHCATVSG*HKPASQLPESA
Trigger: TGCCGACTCTGGTAGCTGGGACGCTGGTTTATGGCATCCTGAGACAGTTGCACAGTGCCAGCGGAGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000683162.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS TCA 72 bp ACTGCGGGACGCGGACCACCACATTCTCGGAGGGGCTaGTGTCTTTCAGATGGGGGTAGAGTCTGGTGTCAA +
Preference number: 6 (lower is better)
Translates to: TAGRGPPHSRRG*CLSDGGRVWCQ
Trigger: TTGACACCAGACTCTACCCCCATCTGAAAGACATCAGCCCCTCCGAGAATGTGGTGGTCCGCGTCCCGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS CAA 72 bp CCGACAAACACGACCAGGGCAATTCGAGTGCCTCTGTaGGCCTTCTTTCCAGTCTCCACGCTGCTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: PTNTTRAIRVPL*AFFPVSTLLPV
Trigger: AACAGGGAGCAGCGTGGAGACTGGAAAGAAGGCCAACAGAGGCACTCGAATTGCCCTGGTCGTGTTTGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS GCA 72 bp GACTCACTAGAAAGAGGATCGTGCCCAGAACTAGGGTaGCACCGACAAACACGACCAGGGCAATTCGAGTGC +
Preference number: 6 (lower is better)
Translates to: DSLERGSCPELG*HRQTRPGQFEC
Trigger: GCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCACCCTAGTTCTGGGCACGATCCTCTTTCTAGTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS GCA 72 bp TCGCTTCTAGAAAGAGGATCGTGCCCAGAACTAGGGTaGCACCGACAAACACGACCAGGGCAATTCGAGTGC +
Preference number: 6 (lower is better)
Translates to: SLLERGSCPELG*HRQTRPGQFEC
Trigger: GCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCACCCTAGTTCTGGGCACGATCCTCTTTCTAGAAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683214.1
CDS CCA 72 bp GCCGTAGAGAGCACACGAGAAGAAAGTCACTTTTCGTaGTTTGGTGGCTGGTCTCAAGAGCGAGGCGTTGAC +
Preference number: 6 (lower is better)
Translates to: AVESTREESHFS*FGGWSQERGVD
Trigger: GTCAACGCCTCGCTCTTGAGACCAGCCACCAAACCACGAAAAGTGACTTTCTTCTCGTGTGCTCTCTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS CAA 72 bp GACCCCGAAGCCACGTCGTTGCCGTGTCTCCACCACTaGTTGACCACAGCTAATTGGACCAAAAGTAGACAC +
Preference number: 6 (lower is better)
Translates to: DPEATSLPCLHH*LTTANWTKSRH
Trigger: GTGTCTACTTTTGGTCCAATTAGCTGTGGTCAACAAGTGGTGGAGACACGGCAACGACGTGGCTTCGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CAA 90 bp ACGGGCCAGCGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTaGGCATCTGCTTTTTCAATCGCTTCTAGAAAGAGGATCGTGCCC +
Preference number: 6 (lower is better)
Translates to: TGQRKGECRRMCSSG*ASAFSIASRKRIVP
Trigger: GGGCACGATCCTCTTTCTAGAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683214.1
CDS CCA 72 bp AACAGCTCTCGCCTGGGTAGTTCCTGGGGACAGATGTaGAGTCAAGGAGCAGAAATGACCAAGAAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: NSSRLGSSWGQM*SQGAEMTKKEP
Trigger: AGGCTCTTTCTTGGTCATTTCTGCTCCTTGACTCCACATCTGTCCCCAGGAACTACCCAGGCGAGAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684356.1
CDS CAA 90 bp ACCATTGACCCTAAACTGAGGGGGACTGTGAGCACCAATTTGGACTaGTTCTCGGGCAGCTTCTGGTCTGTAGGAATTGCACCTCACATG +
Preference number: 6 (lower is better)
Translates to: TIDPKLRGTVSTNLD*FSGSFWSVGIAPHM
Trigger: CATGTGAGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGGGTCAATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CAA 90 bp TGCTGGTTGACTAAACTGAGGGGGACTGTGAGCACCAATTTGGACTaGTTCTCGGGCAGCTTCTGGTCTGTAGGAATTGCACCTCACATG +
Preference number: 6 (lower is better)
Translates to: CWLTKLRGTVSTNLD*FSGSFWSVGIAPHM
Trigger: CATGTGAGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGTCAACCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683162.1
CDS GCA 72 bp ATATTAGATTCAAGCACGGGCCAGCGGAAAGGTGAATaGCGTAGGATGTGTAGCAGTGGCTTGGCATCTGCT +
Preference number: 6 (lower is better)
Translates to: ILDSSTGQRKGE*RRMCSSGLASA
Trigger: AGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCGTGCTTGAATCTAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp GAGCTCTCCTGCTGGAAATCGGATCTGGTTGGTGGATaGACTGTAGAAGGCATTGACAGTCGTCGGATTTGT +
Preference number: 6 (lower is better)
Translates to: ELSCWKSDLVGG*TVEGIDSRRIC
Trigger: ACAAATCCGACGACTGTCAATGCCTTCTACAGTGCATCCACCAACCAGATCCGATTTCCAGCAGGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379374.5
ENST00000682888.1
ENST00000683162.1
ENST00000683289.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CAA 72 bp CCTAAACTGAGGGGGACTGTGAGCACCAATTTGGACTaGTTCTCGGGCAGCTTCTGGTCTGTAGGAATTGCA +
Preference number: 6 (lower is better)
Translates to: PKLRGTVSTNLD*FSGSFWSVGIA
Trigger: TGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CAA 72 bp ATTGACCCTAAACTGAGGGGGACTGTGAGCACCAATTaGGACTTGTTCTCGGGCAGCTTCTGGTCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: IDPKLRGTVSTN*DLFSGSFWSVG
Trigger: TCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGGGTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CAA 72 bp TGGTTGACTAAACTGAGGGGGACTGTGAGCACCAATTaGGACTTGTTCTCGGGCAGCTTCTGGTCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: WLTKLRGTVSTN*DLFSGSFWSVG
Trigger: TCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGTCAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683162.1
CDS CAA 90 bp ACGGGCCAGCGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTaGGCATCTGCTTTTTCAATCGCTTTCTCATTCATGCAGGATGAA +
Preference number: 6 (lower is better)
Translates to: TGQRKGECRRMCSSG*ASAFSIAFSFMQDE
Trigger: TTCATCCTGCATGAATGAGAAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCGCTGGCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379374.5
ENST00000475778.2
CDS CAA 90 bp AATTGCACCATTGACCCTAAACTGAGGGGGACTGTGAGCACCAATTaGGACTTGTTCTCGGGCAGCTTCTGGTCTGTAGGAATTGCACCT +
Preference number: 6 (lower is better)
Translates to: NCTIDPKLRGTVSTN*DLFSGSFWSVGIAP
Trigger: AGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGGGTCAATGGTGCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CAA 90 bp CATGTTTGCTGGTTGACTAAACTGAGGGGGACTGTGAGCACCAATTaGGACTTGTTCTCGGGCAGCTTCTGGTCTGTAGGAATTGCACCT +
Preference number: 6 (lower is better)
Translates to: HVCWLTKLRGTVSTN*DLFSGSFWSVGIAP
Trigger: AGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGTCAACCAGCAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683162.1
CDS GCA 72 bp ATCAAGGTAGTCTTCCCTCACGGCCAGGGAGAGTGTTaGTTGGTCCAGCTTCAAGATATGTTCATTGGATGC +
Preference number: 6 (lower is better)
Translates to: IKVVFPHGQGEC*LVQLQDMFIGC
Trigger: GCATCCAATGAACATATCTTGAAGCTGGACCAAGCAACACTCTCCCTGGCCGTGAGGGAAGACTACCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp TCAGACCCTAATATCCTAAACAAATCTTTAAAGTACTaGGGGACGCGGACCACCACATTCTCGGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SDPNILNKSLKY*GTRTTTFSEGL
Trigger: CAGCCCCTCCGAGAATGTGGTGGTCCGCGTCCCGCAGTACTTTAAAGATTTGTTTAGGATATTAGGGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS CCA 72 bp ACACGAGAAGAAAGTCACTTTTCGTGGTTTGGTGGCTaGTCTCAAGAGCGAGGCGTTGACATCCAAGGCTTT +
Preference number: 6 (lower is better)
Translates to: TREESHFSWFGG*SQERGVDIQGF
Trigger: AAAGCCTTGGATGTCAACGCCTCGCTCTTGAGACCAGCCACCAAACCACGAAAAGTGACTTTCTTCTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS CAA 72 bp ACTAAACTGAGGGGGACTGTGAGCACCAATTTGGACTaGTTCTCGGGCAGCTTCTGGTCTGTAGGAATTGCA +
Preference number: 6 (lower is better)
Translates to: TKLRGTVSTNLD*FSGSFWSVGIA
Trigger: TGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTCCCCCTCAGTTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683162.1
CDS CCA 72 bp GTGAGCACCAATTTGGACTTGTTCTCGGGCAGCTTCTaGTCTGTAGGAATTGCACCTCACATGAGCATAACT +
Preference number: 6 (lower is better)
Translates to: VSTNLDLFSGSF*SVGIAPHMSIT
Trigger: AGTTATGCTCATGTGAGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000683162.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CCA 72 bp GGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCGTCTCATTCATGCAGG +
Preference number: 6 (lower is better)
Translates to: GKVNAVGCVAVA*HLLFQSSHSCR
Trigger: CCTGCATGAATGAGACGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000684143.1
ENST00000684745.1
CDS CAA 72 bp TATCAAGGTAGTCTTCCCTCACGGCCAGGGAGAGTGTaGCTTGGTCCAGCTTCAAGATATGTTCATTGGATG +
Preference number: 6 (lower is better)
Translates to: YQGSLPSRPGRV*LGPASRYVHWM
Trigger: CATCCAATGAACATATCTTGAAGCTGGACCAAGCAACACTCTCCCTGGCCGTGAGGGAAGACTACCTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS CAA 72 bp CGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTaGGCATCTGCTTTTTCAATCGCTTCTAGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: RKGECRRMCSSG*ASAFSIASRKR
Trigger: CCTCTTTCTAGAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683214.1
CDS CAA 72 bp CGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTaGGCATCTGCTTTTTCAATCGTCTCATTCATGCAG +
Preference number: 6 (lower is better)
Translates to: RKGECRRMCSSG*ASAFSIVSFMQ
Trigger: CTGCATGAATGAGACGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000684143.1
ENST00000684745.1
CDS CAA 90 bp CCCCTAGCAAAGAGTACAACAAAGCCACATCCACACACTTCCATTTaGAGACGAGGTCATTGCTACAAAAGCCAAGGTATTAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PLAKSTTKPHPHTSI*RRGHCYKSQGIRPQ
Trigger: CTGAGGCCTAATACCTTGGCTTTTGTAGCAATGACCTCGTCTCAAAATGGAAGTGTGTGGATGTGGCTTTGTTGTACTCTTTGCTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS TCA 72 bp CGTTGCAAGTGTCTGCAGAAGGCTGAACTTTCTCTCTaGCCAAACCCCTTCAGGGCCAATATTAGATTCAAG +
Preference number: 6 (lower is better)
Translates to: RCKCLQKAELSL*PNPFRANIRFK
Trigger: CTTGAATCTAATATTGGCCCTGAAGGGGTTTGGTCAGAGAGAAAGTTCAGCCTTCTGCAGACACTTGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp TTTCTTGCTCTTCTACTAATGGACAGCTTAAGAAACTaGCGTCAGGAAATCTCCCCTCGCCACCCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: FLALLLMDSLRN*RQEISPRHPFS
Trigger: TGAGAAAGGGTGGCGAGGGGAGATTTCCTGACGGCAGTTTCTTAAGCTGTCCATTAGTAGAAGAGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
CDS CCA 72 bp GGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCGCTTTCTCATTCATGC +
Preference number: 6 (lower is better)
Translates to: GKVNAVGCVAVA*HLLFQSLSHSC
Trigger: GCATGAATGAGAAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379374.5
ENST00000475778.2
CDS CCA 72 bp AGTTTACACATTTGTCCCATTGAGGCAGCAAAGTTGTaGTCCCCTGGATTACCCTTGAGAATTCCAGCCATC +
Preference number: 6 (lower is better)
Translates to: SLHICPIEAAKL*SPGLPLRIPAI
Trigger: GATGGCTGGAATTCTCAAGGGTAATCCAGGGGACCACAACTTTGCTGCCTCAATGGGACAAATGTGTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000684143.1
ENST00000684745.1
CDS CCA 72 bp GGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTTaGCATCTGCTTTTTCAATCGCTTCTAGAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: GKVNAVGCVAVA*HLLFQSLLERG
Trigger: TCCTCTTTCTAGAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683214.1
CDS CAA 72 bp CGGAAAGGTGAATGCCGTAGGATGTGTAGCAGTGGCTaGGCATCTGCTTTTTCAATCGCTTTCTCATTCATG +
Preference number: 6 (lower is better)
Translates to: RKGECRRMCSSG*ASAFSIAFSFM
Trigger: CATGAATGAGAAAGCGATTGAAAAAGCAGATGCCAAGCCACTGCTACACATCCTACGGCATTCACCTTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379374.5
ENST00000475778.2
CDS CAA 72 bp AGTCGGCAGGAGTCCATGCCTCTGTTCATCGTGGAATaGGGTGGACAGTTAAAAGCTTTCTGGAATTCTTCA +
Preference number: 6 (lower is better)
Translates to: SRQESMPLFIVE*GGQLKAFWNSS
Trigger: TGAAGAATTCCAGAAAGCTTTTAACTGTCCACCCAATTCCACGATGAACAGAGGCATGGACTCCTGCCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000683162.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS CAA 90 bp GTCTCAGCCAAGGATAAACCCCATAGCTTGGCATATCTTCGGGAATaGGATTATTGCTTATCCAGCCATCACAAGCGAACCGGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: VSAKDKPHSLAYLRE*DYCLSSHHKRTGRN
Trigger: ATTTCTTCCGGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CAA 90 bp GTCATCAGGGGACACATACAAACGGATGAACACAGAATTGCTGTATaGACCACGAAACGTTGCAAGTGTCTGCAGAAGGCTGAACTTTCT +
Preference number: 6 (lower is better)
Translates to: VIRGHIQTDEHRIAV*TTKRCKCLQKAELS
Trigger: AGAAAGTTCAGCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS CAA 90 bp AGCTACCAGAGTCGGCAGGAGTCCATGCCTCTGTTCATCGTGGAATaGGGTGGACAGTTAAAAGCTTTCTGGAATTCTTCAAAGTTACTA +
Preference number: 6 (lower is better)
Translates to: SYQSRQESMPLFIVE*GGQLKAFWNSSKLL
Trigger: TAGTAACTTTGAAGAATTCCAGAAAGCTTTTAACTGTCCACCCAATTCCACGATGAACAGAGGCATGGACTCCTGCCGACTCTGGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000683162.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS TCA 72 bp GACACATACAAACGGATGAACACAGAATTGCTGTATTaGCCACGAAACGTTGCAAGTGTCTGCAGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: DTYKRMNTELLY*PRNVASVCRRL
Trigger: CAGCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp CCCCATAGCTTGGCATATCTTCGGGAATTGGATTATTaGTTATCCAGCCATCACAAGCGAACCGGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: PHSLAYLRELDY*LSSHHKRTGRN
Trigger: ATTTCTTCCGGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS GCA 72 bp AGTATCATTCATTATAAACTCTGGATAGCCAACTTTTaGCAAAACAGCTCTCGCCTGCCCGGTTCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: SIIHYKLWIANF*QNSSRLPGSGG
Trigger: ACCTCCTGAACCGGGCAGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682888.1
ENST00000683162.1
CDS GCA 72 bp CCACATCCACACACTTCCATTTTGAGACGAGGTCATTaGTACAAAAGCCAAGGTATTAGGCCTCAGAACACT +
Preference number: 6 (lower is better)
Translates to: PHPHTSILRRGH*YKSQGIRPQNT
Trigger: AGTGTTCTGAGGCCTAATACCTTGGCTTTTGTAGCAATGACCTCGTCTCAAAATGGAAGTGTGTGGATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS GCA 72 bp AGTATCATTCATTATAAACTCTGGATAGCCAACTTTTaGCAAAACAGCTCTCGCCCTTCACGGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SIIHYKLWIANF*QNSSRPSREQR
Trigger: CCTCTGCTCCCGTGAAGGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CCA 72 bp AGGATAAACCCCATAGCTTGGCATATCTTCGGGAATTaGATTATTGCTTATCCAGCCATCACAAGCGAACCG +
Preference number: 6 (lower is better)
Translates to: RINPIAWHIFGN*IIAYPAITSEP
Trigger: CGGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CAA 72 bp GGACACATACAAACGGATGAACACAGAATTGCTGTATaGACCACGAAACGTTGCAAGTGTCTGCAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: GHIQTDEHRIAV*TTKRCKCLQKA
Trigger: AGCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS CAA 72 bp GAGGGCACTTTCAATAAAGTTTACACATTTGTCCCATaGAGGCAGCAAAGTTGTGGTCCCCTGGATTACCCT +
Preference number: 6 (lower is better)
Translates to: EGTFNKVYTFVP*RQQSCGPLDYP
Trigger: AGGGTAATCCAGGGGACCACAACTTTGCTGCCTCAATGGGACAAATGTGTAAACTTTATTGAAAGTGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000684143.1
ENST00000684745.1
CDS CAA 90 bp GAGAGTGTTGCTTGGTCCAGCTTCAAGATATGTTCATTGGATGCTTaGTCATCAGGGGACACATACAAACGGATGAACACAGAATTGCTG +
Preference number: 6 (lower is better)
Translates to: ESVAWSSFKICSLDA*SSGDTYKRMNTELL
Trigger: CAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGACAAAGCATCCAATGAACATATCTTGAAGCTGGACCAAGCAACACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS TCA 72 bp TGGATGCTTTGTCATCAGGGGACACATACAAACGGATaGACACAGAATTGCTGTATTGACCACGAAACGTTG +
Preference number: 6 (lower is better)
Translates to: WMLCHQGTHTNG*TQNCCIDHETL
Trigger: CAACGTTTCGTGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCTGATGACAAAGCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000683214.1
ENST00000684143.1
ENST00000684745.1
CDS TCA 72 bp TGGCTTTCTGTATGGCTTCGGTGTCCCGCCTTCTACTaGTTGATTTCTCCAAAAGTTCTTGTAAAACAGGAC +
Preference number: 6 (lower is better)
Translates to: WLSVWLRCPAFY*LISPKVLVKQD
Trigger: GTCCTGTTTTACAAGAACTTTTGGAGAAATCAATCAGTAGAAGGCGGGACACCGAAGCCATACAGAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684745.1
CDS GCA 72 bp AGTATCATTCATTATAAACTCTGGATAGCCAACTTTTaGCAAAACAGCTCTCGCCAGGAAGAGCAGGCGAGT +
Preference number: 6 (lower is better)
Translates to: SIIHYKLWIANF*QNSSRQEEQAS
Trigger: ACTCGCCTGCTCTTCCTGGCGAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683917.1
CDS CCA 72 bp AAGATCAGGTGTTGTAGTTTAGTCCCTGCTGGAAGGTaGTTTCTCCAAACCTCAGGAAAACCATGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: KIRCCSLVPAGR*FLQTSGKPCLL
Trigger: AAGAAGACATGGTTTTCCTGAGGTTTGGAGAAACCACCTTCCAGCAGGGACTAAACTACAACACCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CAA 72 bp AAGGATAAACCCCATAGCTTGGCATATCTTCGGGAATaGGATTATTGCTTATCCAGCCATCACAAGCGAACC +
Preference number: 6 (lower is better)
Translates to: KDKPHSLAYLRE*DYCLSSHHKRT
Trigger: GGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CAA 72 bp GCTTGGTCCAGCTTCAAGATATGTTCATTGGATGCTTaGTCATCAGGGGACACATACAAACGGATGAACACA +
Preference number: 6 (lower is better)
Translates to: AWSSFKICSLDA*SSGDTYKRMNT
Trigger: TGTGTTCATCCGTTTGTATGTGTCCCCTGATGACAAAGCATCCAATGAACATATCTTGAAGCTGGACCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp TGTTGCTTGGTCCAGCTTCAAGATATGTTCATTGGATaGTTTGTCATCAGGGGACACATACAAACGGATGAA +
Preference number: 6 (lower is better)
Translates to: CCLVQLQDMFIG*FVIRGHIQTDE
Trigger: TTCATCCGTTTGTATGTGTCCCCTGATGACAAAGCATCCAATGAACATATCTTGAAGCTGGACCAAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp TTCTTAGCCAGAAGAAATCAGACTGTGCTAAATACTTaGGAGTTTGTAGGACGTTGCCAAAGTAGTCGGCTT +
Preference number: 6 (lower is better)
Translates to: FLARRNQTVLNT*EFVGRCQSSRL
Trigger: AAGCCGACTACTTTGGCAACGTCCTACAAACTCGCAAGTATTTAGCACAGTCTGATTTCTTCTGGCTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000379374.5
ENST00000682888.1
ENST00000683162.1
ENST00000683289.1
ENST00000683917.1
ENST00000684356.1
ENST00000684745.1
CDS GCA 72 bp CCTCTCAGGTGTCTAAGTGTTTCCGTAGGGGATAAATaGTACATTTTCTTCCAAGGACTGTTGTGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: PLRCLSVSVGDK*YIFFQGLLCLF
Trigger: AAAAAGGCACAACAGTCCTTGGAAGAAAATGTAGCATTTATCCCCTACGGAAACACTTAGACACCTGAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475778.2
CDS CAA 72 bp CAATTCAGAACCTTTGTCCCAAGCACACATCTTCTCTaGTGTCCTAAGATCAGGTGTTGTAGTTTAGTCCCT +
Preference number: 6 (lower is better)
Translates to: QFRTFVPSTHLL*CPKIRCCSLVP
Trigger: AGGGACTAAACTACAACACCTGATCTTAGGACACAAGAGAAGATGTGTGCTTGGGACAAAGGTTCTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS TCA 72 bp AGAGTACAACAAAGCCACATCCACACACTTCCATTTTaGGACGAGGTCATTGCTACAAAAGCCAAGGTATTA +
Preference number: 6 (lower is better)
Translates to: RVQQSHIHTLPF*DEVIATKAKVL
Trigger: TAATACCTTGGCTTTTGTAGCAATGACCTCGTCTCAAAATGGAAGTGTGTGGATGTGGCTTTGTTGTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CCA 72 bp TTCCAGCCATCTATACTGAAAGCGCCTGCTAAGGTTTaGAATTCTGGAATAAACCATTCTCCACACCAAATA +
Preference number: 6 (lower is better)
Translates to: FQPSILKAPAKV*NSGINHSPHQI
Trigger: TATTTGGTGTGGAGAATGGTTTATTCCAGAATTCCAAACCTTAGCAGGCGCTTTCAGTATAGATGGCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000684143.1
ENST00000684745.1
CDS CAA 72 bp CAACATTATGTCTCAGCCAAGGATAAACCCCATAGCTaGGCATATCTTCGGGAATTGGATTATTGCTTATCC +
Preference number: 6 (lower is better)
Translates to: QHYVSAKDKPHS*AYLRELDYCLS
Trigger: GGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGACATAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CAA 72 bp AAGAGTACAACAAAGCCACATCCACACACTTCCATTTaGAGACGAGGTCATTGCTACAAAAGCCAAGGTATT +
Preference number: 6 (lower is better)
Translates to: KSTTKPHPHTSI*RRGHCYKSQGI
Trigger: AATACCTTGGCTTTTGTAGCAATGACCTCGTCTCAAAATGGAAGTGTGTGGATGTGGCTTTGTTGTACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS GCA 72 bp CTCAGGAAAACCATGTCTTCTTCATCTTATCCACAGTaGTCAGCATTATACAAAGAGCTCTTCAATACCTTG +
Preference number: 6 (lower is better)
Translates to: LRKTMSSSSYPQ*SALYKELFNTL
Trigger: CAAGGTATTGAAGAGCTCTTTGTATAATGCTGAGCACTGTGGATAAGATGAAGAAGACATGGTTTTCCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS GCA 72 bp AGAACTTGGCTGTCTTGTAAGATTGGATTCATCTTTTaGAGCAGCAGCATTCTGGTAGAGAACAATAACTTC +
Preference number: 6 (lower is better)
Translates to: RTWLSCKIGFIF*SSSILVENNNF
Trigger: GAAGTTATTGTTCTCTACCAGAATGCTGCTGCTGCAAAAGATGAATCCAATCTTACAAGACAGCCAAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CCA 72 bp AACATTATGTCTCAGCCAAGGATAAACCCCATAGCTTaGCATATCTTCGGGAATTGGATTATTGCTTATCCA +
Preference number: 6 (lower is better)
Translates to: NIMSQPRINPIA*HIFGNWIIAYP
Trigger: TGGATAAGCAATAATCCAATTCCCGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGACATAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
CDS CCA 72 bp GTTCAGAAATGTTCATTTTGTTGTACATGGCCTCGCTaGTTCGGTTTTCATGTGGAATCATTATCTCAGCTA +
Preference number: 6 (lower is better)
Translates to: VQKCSFCCTWPR*FGFHVESLSQL
Trigger: TAGCTGAGATAATGATTCCACATGAAAACCGAACCAGCGAGGCCATGTACAACAAAATGAACATTTCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379374.5
ENST00000475778.2
ENST00000684143.1
ENST00000684745.1
CDS GCA 72 bp GCATTTTATTTCAGGAACTTTGTGTATGATAGCATGTaGCAAAAATCAGTCATAGTCCAGTGCAGTGCAAAG +
Preference number: 6 (lower is better)
Translates to: AFYFRNFVYDSM*QKSVIVQCSAK
Trigger: CTTTGCACTGCACTGGACTATGACTGATTTTTGGCACATGCTATCATACACAAAGTTCCTGAAATAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS TCA 72 bp AAGAGTTGGACATACAGATGTTCAGATAAGAAGTGTTaGCACCATTCCCTATGCAAAAACAATGAAACATGC +
Preference number: 6 (lower is better)
Translates to: KSWTYRCSDKKC*HHSLCKNNETC
Trigger: GCATGTTTCATTGTTTTTGCATAGGGAATGGTGTCAACACTTCTTATCTGAACATCTGTATGTCCAACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456621.1
CDS CAA 90 bp ATTCACCGGACCCACTTCAAGATCTCAATTAATCATGTAATTCTGTaGCAAGAATCATTCTGCTTGCCTGAATTGTCTTCATCAAAGATA +
Preference number: 6 (lower is better)
Translates to: IHRTHFKISINHVIL*QESFCLPELSSSKI
Trigger: TATCTTTGATGAAGACAATTCAGGCAAGCAGAATGATTCTTGCAACAGAATTACATGATTAATTGAGATCTTGAAGTGGGTCCGGTGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS CAA 90 bp TCTTATCCACAGTGCTCAGCATTATACAAAGAGCTCTTCAATACCTaGATTCATAAAGAACTTCAAGCCGTTTACAAAATCCTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: SYPQCSALYKELFNT*IHKELQAVYKILPV
Trigger: AACTGGAAGGATTTTGTAAACGGCTTGAAGTTCTTTATGAATCAAGGTATTGAAGAGCTCTTTGTATAATGCTGAGCACTGTGGATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS CAA 72 bp ACCCACTTCAAGATCTCAATTAATCATGTAATTCTGTaGCAAGAATCATTCTGCTTGCCTGAATTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: THFKISINHVIL*QESFCLPELSS
Trigger: TGAAGACAATTCAGGCAAGCAGAATGATTCTTGCAACAGAATTACATGATTAATTGAGATCTTGAAGTGGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS CAA 72 bp CAGTGCTCAGCATTATACAAAGAGCTCTTCAATACCTaGATTCATAAAGAACTTCAAGCCGTTTACAAAATC +
Preference number: 6 (lower is better)
Translates to: QCSALYKELFNT*IHKELQAVYKI
Trigger: GATTTTGTAAACGGCTTGAAGTTCTTTATGAATCAAGGTATTGAAGAGCTCTTTGTATAATGCTGAGCACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1
CDS TCA 72 bp TCATGTAATTCTGTTGCAAGAATCATTCTGCTTGCCTaGATTGTCTTCATCAAAGATATTCTTTCAGTGTGT +
Preference number: 6 (lower is better)
Translates to: SCNSVARIILLA*IVFIKDILSVC
Trigger: ACACACTGAAAGAATATCTTTGATGAAGACAATTCAGGCAAGCAGAATGATTCTTGCAACAGAATTACATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379374.5
CDS CAA 72 bp GATTCTATATTAGTAAAAGGCCTTAATAGTACCCTTTaGTATATAAATGTAGTCCTCCATGCTTGGGAACCA +
Preference number: 6 (lower is better)
Translates to: DSILVKGLNSTL*YINVVLHAWEP
Trigger: TGGTTCCCAAGCATGGAGGACTACATTTATATACAAAAGGGTACTATTAAGGCCTTTTACTAATATAGAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683289.1