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Pregenerated sensors for PHC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111752

Ensembl transcript IDs: ENST00000540574.5

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCAGTGAGGGTGGTGGCTTGCGGCTGCTGCTGTTGCTGCTGTTaGTGTTGTTGCTGCTGCTGCTGCTGCGCCAACTGGAGGTGTGTA +
Preference number: 1 (lower is better)
Translates to: GAVRVVACGCCCCCC*CCCCCCCCANWRCV
Trigger: TACACACCTCCAGTTGGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR CAA 90 bp AGGGGCAGTGAGGGTGGTGGCTTGCGGCTGCTGCTGTTGCTGCTGTaGCTGTTGTTGCTGCTGCTGCTGCTGCGCCAACTGGAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: RGSEGGGLRLLLLLL*LLLLLLLLRQLEVC
Trigger: ACACACCTCCAGTTGGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR CAA 90 bp AGTGAGGGTGGTGGCTTGCGGCTGCTGCTGTTGCTGCTGTTGCTGTaGTTGCTGCTGCTGCTGCTGCGCCAACTGGAGGTGTGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: SEGGGLRLLLLLLLL*LLLLLLRQLEVCSC
Trigger: ACAGCTACACACCTCCAGTTGGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR GCA 72 bp GCAGTGAGGGTGGTGGCTTGCGGCTGCTGCTGTTGCTaGTGTTGCTGTTGTTGCTGCTGCTGCTGCTGCGCC +
Preference number: 3 (lower is better)
Translates to: AVRVVACGCCCC*CCCCCCCCCCA
Trigger: GGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR GCA 72 bp GGGGCAGTGAGGGTGGTGGCTTGCGGCTGCTGCTGTTaGTGCTGTTGCTGTTGTTGCTGCTGCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: GAVRVVACGCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR GCA 72 bp GGCTGCTGCTGTTGCTGCTGTTGCTGTTGTTGCTGCTaGTGCTGCTGCGCCAACTGGAGGTGTGTAGCTGTG +
Preference number: 3 (lower is better)
Translates to: GCCCCCCCCCCC*CCCANWRCVAV
Trigger: CACAGCTACACACCTCCAGTTGGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR GCA 72 bp TGCGGCTGCTGCTGTTGCTGCTGTTGCTGTTGTTGCTaGTGCTGCTGCTGCGCCAACTGGAGGTGTGTAGCT +
Preference number: 3 (lower is better)
Translates to: CGCCCCCCCCCC*CCCCANWRCVA
Trigger: AGCTACACACCTCCAGTTGGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540574.5
3UTR CAA 72 bp AGGGGCAGTGAGGGTGGTGGCTTGCGGCTGCTGCTGTaGCTGCTGTTGCTGTTGTTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGSEGGGLRLLL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540574.5
CDS CCA 90 bp AGAGGCAGCACGGCACAGTTTTATAGATTACTGGATTTAGTTCACTaGACTCAGAGACACGAGACCCCTTTGCTAGGTATAGAGAACATA +
Preference number: 5 (lower is better)
Translates to: RGSTAQFYRLLDLVH*TQRHETPLLGIENI
Trigger: TATGTTCTCTATACCTAGCAAAGGGGTCTCGTGTCTCTGAGTCCAGTGAACTAAATCCAGTAATCTATAAAACTGTGCCGTGCTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540574.5
CDS CCA 72 bp ACGGCACAGTTTTATAGATTACTGGATTTAGTTCACTaGACTCAGAGACACGAGACCCCTTTGCTAGGTATA +
Preference number: 6 (lower is better)
Translates to: TAQFYRLLDLVH*TQRHETPLLGI
Trigger: TATACCTAGCAAAGGGGTCTCGTGTCTCTGAGTCCAGTGAACTAAATCCAGTAATCTATAAAACTGTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540574.5
CDS CAA 72 bp GATTTAGTTCACTGGACTCAGAGACACGAGACCCCTTaGCTAGGTATAGAGAACATAATTCCTACATTCACA +
Preference number: 6 (lower is better)
Translates to: DLVHWTQRHETP*LGIENIIPTFT
Trigger: TGTGAATGTAGGAATTATGTTCTCTATACCTAGCAAAGGGGTCTCGTGTCTCTGAGTCCAGTGAACTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540574.5
CDS TCA 72 bp GCTAGGTATAGAGAACATAATTCCTACATTCACATGTaGAAATACAAACCGTATGACCCCTCGTCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: ARYREHNSYIHM*KYKPYDPSSSQ
Trigger: TTGGGAAGACGAGGGGTCATACGGTTTGTATTTTCACATGTGAATGTAGGAATTATGTTCTCTATACCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540574.5
CDS CAA 90 bp AGATTACTGGATTTAGTTCACTGGACTCAGAGACACGAGACCCCTTaGCTAGGTATAGAGAACATAATTCCTACATTCACATGTGAAAAT +
Preference number: 6 (lower is better)
Translates to: RLLDLVHWTQRHETP*LGIENIIPTFTCEN
Trigger: ATTTTCACATGTGAATGTAGGAATTATGTTCTCTATACCTAGCAAAGGGGTCTCGTGTCTCTGAGTCCAGTGAACTAAATCCAGTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540574.5