RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHACTR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000204138

Ensembl transcript IDs: ENST00000373836.4, ENST00000373839.8, ENST00000463428.5, ENST00000493669.2, ENST00000632202.1, ENST00000632421.1, ENST00000632964.1, ENST00000633167.1, ENST00000633371.1

Found 756 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGTCATGGGAAGTGGGCTGGTGAGGGCCTGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: GVMGSGLVRACWIRI*SGSGGSLEGIWGSP
Trigger: TGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCATGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp GGGAGGGATAGGGGGCTGCTTGGCAGGGACCATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGTGCTGGCAGGAGCAGCAGGCAGAGT +
Preference number: 1 (lower is better)
Translates to: GRDRGLLGRDHMSEA*GSSSVSAGRSSRQS
Trigger: ACTCTGCCTGCTGCTCCTGCCAGCACTAACACTACTGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAAGCAGCCCCCTATCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 90 bp GCCCCAGCACCAACCATACTGGTTATAGTGTGGAAGAGGGGCGGGTaGGGTGGAAGCTGCCAGAGAGAGCAGGAGGATCAGCACTGGAGT +
Preference number: 1 (lower is better)
Translates to: APAPTILVIVWKRGG*GGSCQREQEDQHWS
Trigger: ACTCCAGTGCTGATCCTCCTGCTCTCTCTGGCAGCTTCCACCTCACCCGCCCCTCTTCCACACTATAACCAGTATGGTTGGTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR CCA 90 bp CATGGGAAGTGGGCTGGTGAGGGCCTGCTGGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTT +
Preference number: 1 (lower is better)
Translates to: HGKWAGEGLLDSNMQ*EWRQPRGYMGLPKV
Trigger: AACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp AGCAGTAGTGTTAGTGCTGGCAGGAGCAGCAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCT +
Preference number: 1 (lower is better)
Translates to: SSSVSAGRSSRQSPG*WGRGDREINSLCKA
Trigger: AGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCTGCTGCTCCTGCCAGCACTAACACTACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp CGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTGGATTCGAATATGCAGTGGGAGTGG +
Preference number: 1 (lower is better)
Translates to: RMSSVRTLQNRSHGK*AGEGLLDSNMQWEW
Trigger: CCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 90 bp CCGCCAGAGGAAGTGGCATCCTTTGCTTGCCCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTG +
Preference number: 1 (lower is better)
Translates to: PPEEVASFACPSLAS*EEDKGLLGGSKGGL
Trigger: CAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp AGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: SAVHLRRSQRMQFWL*WEVLKFPPYVTLEK
Trigger: CTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp GCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTGTGCTaGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAA +
Preference number: 1 (lower is better)
Translates to: AVHLRRSQRMQFWLC*EVLKFPPYVTLEKE
Trigger: TTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp ACTTGGACTGGACTAGATGATCTGGCATTCCCTATGGGGGTGGTATaGCCATTCTTTAACATGGCATCGCTTGGCTTTCCTGGATCCTCA +
Preference number: 1 (lower is better)
Translates to: TWTGLDDLAFPMGVV*PFFNMASLGFPGSS
Trigger: TGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAAAGAATGGCCATACCACCCCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp TGGAAACTCAATTTCTGGCACAACTTGAAAAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTCTGGAGGTATATGAGTAGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: WKLNFWHNLKSLSRE*RGAWRLWRYMSRQW
Trigger: CCACTGCCTACTCATATACCTCCAGAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATTGAGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 90 bp AAGTGTTGTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGA +
Preference number: 1 (lower is better)
Translates to: KCCFAPGAAHKTLFQ*NATFKVLSTSEDPR
Trigger: TCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAACAACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp GCCTCAAGAGGACTGTATTGCTGTGTTACGAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGA +
Preference number: 1 (lower is better)
Translates to: ASRGLYCCVTRGTVQ*FHLICQCGKKAFPG
Trigger: TCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAAGCATTGCACTGTACCTCTCGTAACACAGCAATACAGTCCTCTTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp ATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTaGCAGTGTGTCTTTCCTCTTCACTTTGTTGGCGAGAGCACTCTG +
Preference number: 1 (lower is better)
Translates to: IQVQLWFTGSVVQLH*QCVFPLHFVGESTL
Trigger: CAGAGTGCTCTCGCCAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp ATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTaGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTG +
Preference number: 1 (lower is better)
Translates to: IQSAVHLRRSQRMQF*LCWEVLKFPPYVTL
Trigger: CAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR TCA 90 bp GACTGTATTGCTGTGTTACGAGAGGTACAGTGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACT +
Preference number: 1 (lower is better)
Translates to: DCIAVLREVQCNAFI*YASVVRRLSLEVET
Trigger: AGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAAGCATTGCACTGTACCTCTCGTAACACAGCAATACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp ATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTGGCATTCCCTATGGGGGTGGTATGG +
Preference number: 1 (lower is better)
Translates to: IAFLRLANLTGSSST*TGLDDLAFPMGVVW
Trigger: CCATACCACCCCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp CCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTaGTTCACTGGGTCTGTGGTTCAACTTCATTGCCAGTGTGTCTTT +
Preference number: 1 (lower is better)
Translates to: PLLLAFTRPRIQVQL*FTGSVVQLHCQCVF
Trigger: AAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp TCAGTGTGTTTCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTaGTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGG +
Preference number: 1 (lower is better)
Translates to: SVCFQSGAVFHSTPP*FYKAKNSGSTLVHW
Trigger: CCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAACACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp CCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTaGGTCTGTGGTTCAACTTCATTGCCAGTGTGTCTTTCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: PCFYKAKNSGSTLVH*VCGSTSLPVCLSSS
Trigger: TGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp TATTGCTGTGTTACGAGAGGTACAGTGCAATGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTT +
Preference number: 1 (lower is better)
Translates to: YCCVTRGTVQCFHLI*QCGKKAFPGGRDSF
Trigger: AAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAAGCATTGCACTGTACCTCTCGTAACACAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 90 bp TTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGTGTGTCTTTCCTCTTCACTTTGTTG +
Preference number: 1 (lower is better)
Translates to: LQGQEFRFNSGSLGL*FNFIASVSFLFTLL
Trigger: CAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 90 bp TTGACTGAGCTTTCTAGTGAGCCGACGTTTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATTTTTAGCCAAGTAGTGCTGAGAGAA +
Preference number: 1 (lower is better)
Translates to: LTELSSEPTFNFSFF*LTISFIFSQVVLRE
Trigger: TTCTCTCAGCACTACTTGGCTAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAGCTCAGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR GCA 90 bp ACTGAGGTAGGTGTCATTTCTTCACTGAATGTGGATGGACAGGTTTaGTCCTCTTCTTCTTCATCGTCTGGAACTTTTAGCATTTCAATA +
Preference number: 1 (lower is better)
Translates to: TEVGVISSLNVDGQV*SSSSSSSGTFSISI
Trigger: TATTGAAATGCTAAAAGTTCCAGACGATGAAGAAGAAGAGGAGCAAACCTGTCCATCCACATTCAGTGAAGAAATGACACCTACCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 90 bp CTGAGCTTTCTAGTGAGCCGACGTTTAATTTCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTAGGTTGCAATATATTGCGTTGTTCT +
Preference number: 1 (lower is better)
Translates to: LSFLVSRRLISRFSA*RSASFLGCNILRCS
Trigger: AGAACAACGCAATATATTGCAACCTAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAGCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR GCA 90 bp TTGACTGAGCTTTCTAGTGAGCCGACGTTTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATTTTTAGGTTGCAATATATTGCGTTG +
Preference number: 1 (lower is better)
Translates to: LTELSSEPTFNFSFF*LTISFIFRLQYIAL
Trigger: CAACGCAATATATTGCAACCTAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAGCTCAGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR CAA 90 bp GCACTGAGAAGAAGAGGGGAGCAGTGGGCCATGATTGTGCCCTTCTaGCTTCTCCAGAGACCCTTTCCTATGCAGCACCCCACACCCAGC +
Preference number: 2 (lower is better)
Translates to: ALRRRGEQWAMIVPF*LLQRPFPMQHPTPS
Trigger: GCTGGGTGTGGGGTGCTGCATAGGAAAGGGTCTCTGGAGAAGCAAGAAGGGCACAATCATGGCCCACTGCTCCCCTCTTCTTCTCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR-3UTR CCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGAGCCTCCCCAGTGGCTaGGACTACAAGGCACAAGCC +
Preference number: 2 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLSLPSG*DYKAQA
Trigger: GGCTTGTGCCTTGTAGTCCCAGCCACTGGGGAGGCT...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR-3UTR CCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSISLSRE*RGAWRL
Trigger: GAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACT...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCATGGGAAGTGGGCTGGTaGGGGCCTGCTGGATTCGAA +
Preference number: 2 (lower is better)
Translates to: SHNQGRAGKANGANCVSAWEVGW*GPAGFE
Trigger: TTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCA...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGTGAGATCATTGGTAGTAGTTCCGAGCCCATAGAACACGTGCTCTTCTCTCTTGGCTTGTGGCAGCAGTaGTGGCAGCGGGTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GEIIGSSSEPIEHVLFSLGLWQQ*WQRVLW
Trigger: CCACAGCACCCGCTGCCACCACTGCTGCCACAAGCC...AAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGATCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGGCTATTTCTGTGAGCTaGTTTAGGGGGAGGGATAGG +
Preference number: 2 (lower is better)
Translates to: WEWRQPRGYMGLPKVLVQAISVS*FRGRDR
Trigger: CCTATCCCTCCCCCTAAACCAGCTCACAGAAATAGC...CTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCTGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSICWIRI*SGSGGS
Trigger: GCTGCCTCCACTCCCACTGCATATTCGAATCCAGCA...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTATCGCTTGGCTTTCCTaGATCCTCACCACCTTGCTC +
Preference number: 2 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGIAWLS*ILTTLL
Trigger: GAGCAAGGTGGTGAGGATCCAGGAAAGCCAAGCGAT...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGTGCCGCCAGAGGAAGTaGCATCCTTTGCTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLCRQRK*HPLLAL
Trigger: AAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCA...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGGGTGCGTGGAGGCTCTaGAGGTATATGAGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLGAWRL*RYMSRQ
Trigger: CTGCCTACTCATATACCTCCAGAGCCTCCACGCACC...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTGTGTGGGAGTGGGCCTaGGCACAGGGGCTCAAAACG +
Preference number: 2 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPVWEWA*AQGLKT
Trigger: CGTTTTGAGCCCCTGTGCTCAGGCCCACTCCCACAC...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR-3UTR TCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCTTGGTGTTTTTGTGGTaGTGGCAGCAGCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSILVFLW*WQQQTP
Trigger: TGGAGTCTGCTGCTGCCATCACCACAAAAACACCAA...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGGGGATTACAGATGCGTaGCACCACGCCAGGCTAATT +
Preference number: 2 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLGITDA*HHARLI
Trigger: AATTAGCCTGGCGTGGTGGCACGCATCTGTAATCCC...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGCAGGGGTCAGTTTaGTCCAAGGTTTGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: SHNQGRAGKANGANCVSAQQGSV*SKVCRL
Trigger: GAGCCGACAAACCTTGGACCAAACTGACCCCTGCTG...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 90 bp CAGGGCTTGAAGATCTTGCCAAAGCCTGAGAACTTGCTCTTCCTTTaGGTAGGAGGTGTTGTGTCTCCTGCTTCCACACTGTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: QGLKILPKPENLLFL*VGGVVSPASTLSRT
Trigger: GGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCTACCAAAAGGAAGAGCAAGTTCTCAGGCTTTGGCAAGATCTTCAAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR-3UTR TCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCCTGGTCTTGAACTCCTaGACTCAGGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVLVLNS*TQVIHP
Trigger: CGGGTGGATCACCTGAGTTCAGGAGTTCAAGACCAG...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR-3UTR GCA 90 bp AGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCCTCTTGGAAGTGGCATCCTTTaGTTGCCCTTCACTTGCTTC +
Preference number: 2 (lower is better)
Translates to: RQPRGYMGLPKVLVQYPLGSGIL*LPFTCF
Trigger: GAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCC...AAGAGGATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCATCACTTGGTGTTTTTGTGGTGATGGCAGCAGCAGACTCCAAGGTGGGTACTGGAGATGATGAACCTTaGCGTGCCGCCAGAGGAAGT +
Preference number: 2 (lower is better)
Translates to: SSLGVFVVMAAADSKVGTGDDEP*RAARGS
Trigger: ACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCC...AGTACCCACCTTGGAGTCTGCTGCTGCCATCACCACAAAAACACCAAGTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGA +
Preference number: 2 (lower is better)
Translates to: LAFTRPRIQVQLWFTGSVRQSPG*WGRGDR
Trigger: TCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCT...CACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGRSHGK*AGEGLL
Trigger: CAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCT...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGGGGACAGTTCAGCAATaGCAGGGTTGCTATTTCTGT +
Preference number: 2 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLGTVQQ*QGCYFC
Trigger: ACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCC...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCATTGGTGTTTTTGTGGTaGTGGCAGCAGCAGACTCCA +
Preference number: 2 (lower is better)
Translates to: SHNQGRAGKANGANCVSALVFLW*WQQQTP
Trigger: TGGAGTCTGCTGCTGCCATCACCACAAAAACACCAA...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTAATGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVMILAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCAT...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCATCACTTGGTGTTTTTGTGGTGATGGCAGCAGCAGACTCCAAGGTGGGTACTGGATCCTCACCACCTTaGTCAGGGTCTTCCAACAGA +
Preference number: 2 (lower is better)
Translates to: SSLGVFVVMAAADSKVGTGSSPP*SGSSNR
Trigger: TCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCC...AGTACCCACCTTGGAGTCTGCTGCTGCCATCACCACAAAAACACCAAGTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GCCCATAGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGA +
Preference number: 2 (lower is better)
Translates to: AHRTRALLSFITWCFCGDRQSPG*WGRGDR
Trigger: TCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCT...ATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTAGGTGTTGTGTCTCCTaGTTCCACACTGTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTRCCVS*FHTVQD
Trigger: GTCCTGGACAGTGTGGAAGCAGGAGACACAACACCT...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR-3UTR CCA 90 bp TGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCGTAGACACTATCTGGCATTCCCTATaGGGGTGGTATGGCCATTCT +
Preference number: 2 (lower is better)
Translates to: WDLLNQSRSPSLLPPVDTIWHSL*GWYGHS
Trigger: AGAATGGCCATACCACCCCCATAGGGAATGCCAGAT...AGTGTCTACGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 90 bp CCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTG +
Preference number: 2 (lower is better)
Translates to: PSICHFGEGSSKAAM*IPLSTFGIMDDGSV
Trigger: CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTTTGGCAGGGACCATATaGGTGAGGCTTGGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: GQEFRFNSGSLGLWFNFILAGTI*VRLGVA
Trigger: TGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAA...AATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTATCCATTTCCAGGGCTTaGAGATCTTGCCAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVSISRA*RSCQSL
Trigger: CAGGCTTTGGCAAGATCTTCAAGCCCTGGAAATGGA...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR-3UTR GCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCTGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSICFHLI*QCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCA...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGTGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCTTGTGGCACTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: GAGEGVTERLTVFARLVALHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...TGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAATCGCTTGGCTTTCCTaGATCCTCACCACCTTGCTC +
Preference number: 2 (lower is better)
Translates to: AGESPGVDLRMVETQFLAIAWLS*ILTTLL
Trigger: GAGCAAGGTGGTGAGGATCCAGGAAAGCCAAGCGAT...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACCTATGGGGGTGGTATaGCCATTCTTTAACATGGCA +
Preference number: 2 (lower is better)
Translates to: SHNQGRAGKANGANCVSAPMGVV*PFFNMA
Trigger: TGCCATGTTAAAGAATGGCCATACCACCCCCATAGG...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTG +
Preference number: 2 (lower is better)
Translates to: SHNQGRAGKANGANCVSAGSSST*TGLDDL
Trigger: CAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCC...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATGCCGCCAGAGGAAGTaGCATCCTTTGCTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: KAKNSGSTLVHWVCGSTSCRQRK*HPLLAL
Trigger: AAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCA...TGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCATCGTCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGAAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: SSSGTFSISIVMGRDLVRSLSRE*RGAWRL
Trigger: GAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACT...TCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 90 bp CCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAA +
Preference number: 2 (lower is better)
Translates to: PPGIGFDGWNLEPTH*GLTIRAGQVRLMVQ
Trigger: TTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGAAGGTTCAAAAGCACTaGCAAAGTGTTGTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLKVQKH*QSVVLP
Trigger: GGGCAAAACAACACTTTGTCAGTGCTTTTGAACCTT...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGAAGGTTCAAAAGCACTaGCAAAGTGTTGTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRKVQKH*QSVVLP
Trigger: GGGCAAAACAACACTTTGTCAGTGCTTTTGAACCTT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGTCTGGTGTTGGTCTTTaGCTCAGTCGCCGGATCAGT +
Preference number: 2 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILSGVGL*LSRRIS
Trigger: ACTGATCCGGCGACTGAGTCAAAGACCAACACCAGA...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTGCGACAGTTGGCCTTTaGCTGAGCTTTCTAGTGAGC +
Preference number: 2 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPATVGL*LSFLVS
Trigger: GCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGC...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGATGCTACATTCAAAGTaGTGTCCACCTCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRMLHSK*CPPQKI
Trigger: GATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGATGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQMILAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCAT...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR-3UTR GCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAGGAAGTGGCATCCTTTaGTTGCCCTTCACTTGCTTC +
Preference number: 2 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAAGSGIL*LPFTCF
Trigger: GAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCC...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: SHNQGRAGKANGANCVSALHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: GSHNQGRAGKANGANCVSSGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGTGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCTTGTGGCAAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: GAGEGVTERLTVFARLVASGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...TGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGCCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGACCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAGCAGCCAGTAAAACCTaGAACCTGCAAGTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAAAASKT*NLQVVQ
Trigger: CTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGC...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp ACAGGTGTGTACCACTGCACCAGGCCCCTGCCGTGTAAAATGTTTGCTCTCTTCGAAGTAAAGGTGGTTTaGGTACATTCTCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: TGVYHCTRPLPCKMFALFEVKVV*VHSQEQ
Trigger: CTGTTCCTGAGAATGTACCCAAACCACCTTTACTTC...GAAGAGAGCAAACATTTTACACGGCAGGGGCCTGGTGCAGTGGTACACACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR-3UTR CCA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGCATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGT +
Preference number: 2 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVHMSEA*GSSSVS
Trigger: ACTAACACTACTGCTACCCCAAGCCTCACTCATATG...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTGCCAGGTGCGTGGAGGCTCTaGAGGTATATGAGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: KNSGSTLVHWVCGSTSLPGAWRL*RYMSRQ
Trigger: CTGCCTACTCATATACCTCCAGAGCCTCCACGCACC...TGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CATCTCGGTACTGAATGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: HLGTEWDLLNQSRSPSLLDSNMQ*EWRQPR
Trigger: TCTAGGCTGCCTCCACTCCCACTGCATATTCGAATC...AAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGATTGGACTGGACTAGATaGTCTGGCATTCCCTATGGG +
Preference number: 2 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRLDWTR*SGIPYG
Trigger: CCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAA...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAGGGACAGTTCAGCAATaGCAGGGTTGCTATTTCTGT +
Preference number: 2 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSGTVQQ*QGCYFC
Trigger: ACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCC...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp ACAGGTGTGTACCACTGCACCAGGCCCCTGCCGTGTAAAATGTTTGCTCTCTTCTCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTA +
Preference number: 2 (lower is better)
Translates to: TGVYHCTRPLPCKMFALFSRFSA*RSASFL
Trigger: TAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGA...GAAGAGAGCAAACATTTTACACGGCAGGGGCCTGGTGCAGTGGTACACACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR-3UTR GCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTGCAAACTGTGTCTCTaGACAGGCAGTCATCTAGGG +
Preference number: 2 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLCKLCL*TGSHLG
Trigger: CCCTAGATGACTGCCTGTGCAGAGACACAGTTTGCA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGCCTCTCAGGCTTGAGTaGCTCAAGAGGACTGTATTG +
Preference number: 2 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILPLRLE*LKRTVL
Trigger: CAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGG...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCCAGCCTCAGGAACAGACTCTaGTTCAGAATTAGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: SGTFSISIVMGRDLVRPSLRNRL*FRIRLA
Trigger: AGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAG...GCTGGGTCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGACTCAGGAACAGACTCTaGTTCAGAATTAGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: EDKGLLGGSKGGLGTFSGLRNRL*FRIRLA
Trigger: AGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAG...TCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCATCACTTGGTGTTTTTGTGGTGATGGCAGCAGCAGACTCCAAGGTGGGTACTTGCTTGCCCTTCACTTaGTTCATGAGAAGAGGACAA +
Preference number: 2 (lower is better)
Translates to: SSLGVFVVMAAADSKVGTCLPFT*FMRRGQ
Trigger: TTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCA...AGTACCCACCTTGGAGTCTGCTGCTGCCATCACCACAAAAACACCAAGTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTCTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: KNMSDPELPLRLECLKRTLHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 2 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTGCCACCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: KNSGSTLVHWVCGSTSLPPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...TGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGCTTTTATCAGAAGGTTaGGGGTCTCCAGAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: RTCQILSFLSGLSASRGLLLSEG*GSPEGF
Trigger: AAAACCTTCTGGAGACCCCCAACCTTCTGATAAAAG...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CCA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAAATCTGGCATTCCCTATaGGGGTGGTATGGCCATTCT +
Preference number: 2 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKIWHSL*GWYGHS
Trigger: AGAATGGCCATACCACCCCCATAGGGAATGCCAGAT...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGT +
Preference number: 2 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTGSLGL*FNFIAS
Trigger: ACTGGCAATGAAGTTGAACCACAGACCCAGTGAACC...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR CAA 90 bp GTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATT +
Preference number: 2 (lower is better)
Translates to: VVQPVKPGTCKWFRT*VASKGKTPQACYNI
Trigger: AATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CAA 90 bp AATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCTTCACTTTGTTGGCGAGAGCACTCT +
Preference number: 2 (lower is better)
Translates to: NSGSTLVHWVCGSTS*PVCLSSSLCWREHS
Trigger: AGAGTGCTCTCGCCAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCGTAGACACTAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: WDLLNQSRSPSLLPPVDTKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...AGTGTCTACGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp CACCGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAATGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGA +
Preference number: 2 (lower is better)
Translates to: HRAWPHLTNLDSGWSSGKCNAFI*YASVVR
Trigger: TCTTACCACACTGGCATATCAGATGAAAGCATTGCA...TTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR TCA 90 bp GTTTCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCACCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTT +
Preference number: 2 (lower is better)
Translates to: VSNLVPYFIPLLLAFTRPPSLAS*EEDKGL
Trigger: AAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGG...TGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp AAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCACCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTT +
Preference number: 2 (lower is better)
Translates to: KAKNSGSTLVHWVCGSTSPSLAS*EEDKGL
Trigger: AAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGG...TGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCGGGTTGCTATTTCTGTaGGCTGGTTTAGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: ASKGKTPQACYNIERFKSGLLFL*AGLGGG
Trigger: CCCTCCCCCTAAACCAGCTCACAGAAATAGCAACCC...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCATCTTCATCTCGGTACTaGATGGGACCTTCTGAATCA +
Preference number: 2 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAASSSRY*MGPSES
Trigger: TGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGA...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp CATCTCGGTACTGAATGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: HLGTEWDLLNQSRSPSLLMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...AAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCATGCTACATTCAAAGTaGTGTCCACCTCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVMLHSK*CPPQKI
Trigger: GATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 2 (lower is better)
Translates to: TFGSHNQGRAGKANGANCVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...ACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 2 (lower is better)
Translates to: KNMSDPELPLRLECLKRTVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR GCA 90 bp GAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: EDAILAVLGSAKVPSICHCFHLI*QCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCA...GTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCTCAAGAGGACTGTATTaGTGTGTTACGAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVSRGLY*CVTRGT
Trigger: TGTACCTCTCGTAACACAGCAATACAGTCCTCTTGA...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GGTGAGATCATTGGTAGTAGTTCCGAGCCCATAGAACACGTGCTCTTCTCTCTTTGCTTGCCCTTCACTTaGTTCATGAGAAGAGGACAA +
Preference number: 2 (lower is better)
Translates to: GEIIGSSSEPIEHVLFSLCLPFT*FMRRGQ
Trigger: TTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCA...AAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGATCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCCAGCGAGATTAACAGTCTTTaGAAGGCTTGTGGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SGTFSISIVMGRDLVRPSEINSL*KACGSS
Trigger: ACTGCTGCCACAAGCCTTGCAAAGACTGTTAATCTC...GCTGGGTCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCCAGCGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 2 (lower is better)
Translates to: SGTFSISIVMGRDLVRPSGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...GCTGGGTCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 2 (lower is better)
Translates to: AGESPGVDLRMVETQFLAGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GCCCATAGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGCAGCCAGTAAAACCTaGAACCTGCAAGTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: AHRTRALLSFITWCFCGDAASKT*NLQVVQ
Trigger: CTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGC...ATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGGCAGCGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTG +
Preference number: 2 (lower is better)
Translates to: RTRALLSFITWCFCGDGSGSSST*TGLDDL
Trigger: CAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCC...GCTGCCATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 2 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSTRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCATGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGA +
Preference number: 2 (lower is better)
Translates to: AGESPGVDLRMVETQFLACNAFI*YASVVR
Trigger: TCTTACCACACTGGCATATCAGATGAAAGCATTGCA...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGATCTTGCCAAAGCCTaGGAACTTGCTCTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLDLAKA*ELALPF
Trigger: AAAAGGAAGAGCAAGTTCTCAGGCTTTGGCAAGATC...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR-3UTR GCA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAG +
Preference number: 2 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTRGTVQ*FHLICQ
Trigger: CTGGCATATCAGATGAAAGCATTGCACTGTACCTCT...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR GCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAG +
Preference number: 2 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSRGTVQ*FHLICQ
Trigger: CTGGCATATCAGATGAAAGCATTGCACTGTACCTCT...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTCCTCTCAGGCTTGAGTaGCTCAAGAGGACTGTATTG +
Preference number: 2 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSPLRLE*LKRTVL
Trigger: CAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGG...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCACATTCCACTCCTCCTTaGTTTTACAAGGCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAAHSTPP*FYKAKN
Trigger: ATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATG...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 2 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 2 (lower is better)
Translates to: RTCQILSFLSGLSASRGLIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CCA 90 bp GGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTAGGACAAGGGTCTTTTaGGAGGAAGTAAAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: GQEFRFNSGSLGLWFNFIRTRVF*EEVKVV
Trigger: AACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCT...AATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CATGAGAAGAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATAGGACAAGGGTCTTTTaGGAGGAAGTAAAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: HEKRTRVFWEEVKVVWVHRTRVF*EEVKVV
Trigger: AACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCT...ATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTCTTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGACATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGT +
Preference number: 2 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRHMSEA*GSSSVS
Trigger: ACTAACACTACTGCTACCCCAAGCCTCACTCATATG...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGCATCTCGGTACTGAATaGGACCTTCTGAATCAGAGT +
Preference number: 2 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQHLGTE*DLLNQS
Trigger: ACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 90 bp ATCAGTGTGTTTCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTG +
Preference number: 2 (lower is better)
Translates to: ISVFPIWCRISFHSS*LLQGQEFRFNSGSL
Trigger: CAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAACACACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 90 bp AGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATAATCTaGAGCATCTGTTACCTCTACATATTCATTAAACCTCAGAATCTT +
Preference number: 2 (lower is better)
Translates to: RGQFGPRFVGSPVII*SICYLYIFIKPQNL
Trigger: AAGATTCTGAGGTTTAATGAATATGTAGAGGTAACAGATGCTCAAGATTATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAG +
Preference number: 2 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRRGTVQ*FHLICQ
Trigger: CTGGCATATCAGATGAAAGCATTGCACTGTACCTCT...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp CGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACGTGGATGGACAGGTTTaGTCCTCTTCTTCTTCATCG +
Preference number: 2 (lower is better)
Translates to: RISFHSSLLLQGQEFRFNVDGQV*SSSSSS
Trigger: CGATGAAGAAGAAGAGGAGCAAACCTGTCCATCCAC...GTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPSGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGCTTTTATCAGAAGGTTaGGGGTCTCCAGAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILLLSEG*GSPEGF
Trigger: AAAACCTTCTGGAGACCCCCAACCTTCTGATAAAAG...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GTTTCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCACCACTGTTTATTGCTTaGGACAGTTCAGCAATGACA +
Preference number: 2 (lower is better)
Translates to: VSNLVPYFIPLLLAFTRPPLFIA*DSSAMT
Trigger: TGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGG...TGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp AGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGGCAGCCCACTGTTTATTGCTTaGGACAGTTCAGCAATGACA +
Preference number: 2 (lower is better)
Translates to: RTRALLSFITWCFCGDGSPLFIA*DSSAMT
Trigger: TGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGG...GCTGCCATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTTGCTGGGGAATCTCCTaGTGTAGATCTAAGGATGGT +
Preference number: 2 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSCWGIS*CRSKDG
Trigger: ACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGT +
Preference number: 2 (lower is better)
Translates to: RISFHSSLLLQGQEFRFNGSLGL*FNFIAS
Trigger: ACTGGCAATGAAGTTGAACCACAGACCCAGTGAACC...GTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp CGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 2 (lower is better)
Translates to: RISFHSSLLLQGQEFRFNTRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...GTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp GTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 2 (lower is better)
Translates to: VVRRLSLEVETLLSEGWGKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...CCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 2 (lower is better)
Translates to: AGESPGVDLRMVETQFLAIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 2 (lower is better)
Translates to: ASKGKTPQACYNIERFKSTRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR GCA 90 bp TTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGACTAGATGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 2 (lower is better)
Translates to: FLRLANLTGSSSTWTGLDVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...ATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 2 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTCAATTCTGGCTGTGCTaGGAAGTGCTAAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLQFWLC*EVLKFP
Trigger: AGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTG...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTCTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: KLLKHATILKGSKALTKCLHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR TCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: SKGKTPQACYNIERFKSTKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp AGGGGGCTGCTTGGCAGGGACCATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGTGCTGGCAGGAGCAGC +
Preference number: 3 (lower is better)
Translates to: RGLLGRDHMSEA*GSSSVSAGRSS
Trigger: GCTGCTCCTGCCAGCACTAACACTACTGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAAGCAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp TGGGCTGGTGAGGGCCTGCTGGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTC +
Preference number: 3 (lower is better)
Translates to: WAGEGLLDSNMQ*EWRQPRGYMGL
Trigger: GAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: WEWRQPRGYMGLPKVLVQSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...CTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp TGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTaGAAGGCTTGTGGCAGCAGTGGTGGCAGCGGGTGC +
Preference number: 3 (lower is better)
Translates to: CWGRGDREINSL*KACGSSGGSGC
Trigger: GCACCCGCTGCCACCACTGCTGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp GGAAGTGGGCTGGTGAGGGCCTGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGCCTAGAGGGTATATGG +
Preference number: 3 (lower is better)
Translates to: GSGLVRACWIRI*SGSGGSLEGIW
Trigger: CCATATACCCTCTAGGCTGCCTCCACTCCCACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp CCAACCATACTGGTTATAGTGTGGAAGAGGGGCGGGTaGGGTGGAAGCTGCCAGAGAGAGCAGGAGGATCAG +
Preference number: 3 (lower is better)
Translates to: PTILVIVWKRGG*GGSCQREQEDQ
Trigger: CTGATCCTCCTGCTCTCTCTGGCAGCTTCCACCTCACCCGCCCCTCTTCCACACTATAACCAGTATGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR GCA 72 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGA +
Preference number: 3 (lower is better)
Translates to: GRGVVQPVKPGT*KWFRTLVASKG
Trigger: TCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp CTTGCTCTTCCTTTTGGTAGGAGGTGTTGTGTCTCCTaGTTCCACACTGTCCAGGACCATGCCTGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: LALPFGRRCCVS*FHTVQDHAWLC
Trigger: ACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCTACCAAAAGGAAGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR CCA 72 bp TCTGTGAGAACCCTCCAGAATAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTGGATTCGAATATGCAG +
Preference number: 3 (lower is better)
Translates to: SVRTLQNRSHGK*AGEGLLDSNMQ
Trigger: CTGCATATTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCTATTCTGGAGGGTTCTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp TTGTGCCCTTCTTGCTTCTCCAGAGACCCTTTCCTATaGAGCACCCCACACCCAGCCAGACCTTATTGTGAT +
Preference number: 3 (lower is better)
Translates to: LCPSCFSRDPFL*STPHPARPYCD
Trigger: ATCACAATAAGGTCTGGCTGGGTGTGGGGTGCTGCATAGGAAAGGGTCTCTGGAGAAGCAAGAAGGGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR GCA 72 bp GCCAGAGGAAGTGGCATCCTTTGCTTGCCCTTCACTTaGTTCATGAGAAGAGGACAAGGGTCTTTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ARGSGILCLPFT*FMRRGQGSFGR
Trigger: CCTCCCAAAAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGCCTCATCTAACCAATTaGGATTCTGGTTGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: WEWRQPRGYMGLPKVLVQPHLTN*DSGWSS
Trigger: TGAACTCCAACCAGAATCCAAATTGGTTAGATGAGG...CTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGGAGGACAAGGGTCTTTaGGGAGGAAGTAAAGGTGGT +
Preference number: 3 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLEDKGL*GGSKGG
Trigger: ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCATTCTGGTGTTGGTCTTaGACTCAGTCGCCGGATCAG +
Preference number: 3 (lower is better)
Translates to: SHNQGRAGKANGANCVSAFWCWS*TQSPDQ
Trigger: CTGATCCGGCGACTGAGTCAAAGACCAACACCAGAA...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 3 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGATGATTGTGCCCTTCTaGCTTCTCCAGAGACCCTTT +
Preference number: 3 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLMIVPF*LLQRPF
Trigger: AAAGGGTCTCTGGAGAAGCAAGAAGGGCACAATCAT...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR CCA 72 bp CTTTTCTTATGGCAGCCTTGTCAGCAGGGGTCAGTTTaGTCCAAGGTTTGTCGGCTCGCCGGTCATAATCTT +
Preference number: 3 (lower is better)
Translates to: LFLWQPCQQGSV*SKVCRLAGHNL
Trigger: AAGATTATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 3 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTCCTCCATATGTCACTTaGGAGAAGGAAGCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASPPYVT*EKEAAK
Trigger: CTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGG...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGTCTTTTATCAGAAGGTaGGGGGTCTCCAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLSFIRR*GVSRRF
Trigger: AAACCTTCTGGAGACCCCCAACCTTCTGATAAAAGA...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp ACAGGTGTGTACCACTGCACCAGGCCCCTGCCGTGTAAAATGTTTGCTCTCTTCTCTTTTATCAGAAGGTaGGGGGTCTCCAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: TGVYHCTRPLPCKMFALFSFIRR*GVSRRF
Trigger: AAACCTTCTGGAGACCCCCAACCTTCTGATAAAAGA...GAAGAGAGCAAACATTTTACACGGCAGGGGCCTGGTGCAGTGGTACACACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR-3UTR CAA 90 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGTGGATCCTCACCACCTaGCTCAGGGTCTTCCAACAG +
Preference number: 3 (lower is better)
Translates to: LAFTRPRIQVQLWFTGSVWILTT*LRVFQQ
Trigger: CTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCCA...CACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCTTTCTTATGGCAGCCTaGTCAGCAGGGGTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVFLMAA*SAGVSL
Trigger: CAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAA...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp TCTTACTGGCTCTTCCTCTACTTGGACTGGACTAGATaGTCTGGCATTCCCTATGGGGGTGGTATGGCCATT +
Preference number: 3 (lower is better)
Translates to: SYWLFLYLDWTR*SGIPYGGGMAI
Trigger: AATGGCCATACCACCCCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp AACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTaGCTCAAGAGGACTGTATTGCTGTGTTACGAGAGG +
Preference number: 3 (lower is better)
Translates to: NMSDPELPLRLE*LKRTVLLCYER
Trigger: CCTCTCGTAACACAGCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR CCA 72 bp GGACTAGATGATCTGGCATTCCCTATGGGGGTGGTATaGCCATTCTTTAACATGGCATCGCTTGGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: GLDDLAFPMGVV*PFFNMASLGFP
Trigger: AGGAAAGCCAAGCGATGCCATGTTAAAGAATGGCCATACCACCCCCATAGGGAATGCCAGATCATCTAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCATTAACATGGCATCGCTaGGCTTTCCTGGATCCTCAC +
Preference number: 3 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSLTWHR*AFLDPH
Trigger: GTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAA...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp GCTGTGTTACGAGAGGTACAGTGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: AVLREVQCNAFI*YASVVRRLSLE
Trigger: CTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAAGCATTGCACTGTACCTCTCGTAACACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp TTCATCTTCTTCATCTCGGTACTGAATGGGACCTTCTaGATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCG +
Preference number: 3 (lower is better)
Translates to: FIFFISVLNGTF*IRVALLLFFLP
Trigger: CGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGAAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp CAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTaGCAGTGTGTCTTTCCTCTTCACTTTGTTGGCGAG +
Preference number: 3 (lower is better)
Translates to: QLWFTGSVVQLH*QCVFPLHFVGE
Trigger: CTCGCCAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp AATTTCTGGCACAACTTGAAAAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTCTGGAGGTATATGAGT +
Preference number: 3 (lower is better)
Translates to: NFWHNLKSLSRE*RGAWRLWRYMS
Trigger: ACTCATATACCTCCAGAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 3 (lower is better)
Translates to: KNMSDPELPLRLECLKRTSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CAA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: KNMSDPELPLRLECLKRTKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCTTTCCCCACCAGGAATaGGATTTGATGGCTGGAATT +
Preference number: 3 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVFPHQE*DLMAGI
Trigger: AATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAA...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGTGAGATCATTGGTAGTAGTTCCGAGCCCATAGAACACGTGCTCTTCTCTCTTCTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTAC +
Preference number: 3 (lower is better)
Translates to: GEIIGSSSEPIEHVLFSLLKRTV*LCYERY
Trigger: GTACCTCTCGTAACACAGCAATACAGTCCTCTTGAG...AAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGATCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp CATCTCGGTACTGAATGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTAGGGTGGGGACGGTTTaGATAACAATGTACCACTGT +
Preference number: 3 (lower is better)
Translates to: HLGTEWDLLNQSRSPSLLRVGTV*ITMYHC
Trigger: ACAGTGGTACATTGTTATCAAAACCGTCCCCACCCT...AAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TGGTCCAAGGTTTGTCGGCTCGCCGGTCATAATCTTGAGCATCTGTTACCTCTATGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: WSKVCRLAGHNLEHLLPLCGSTS*PVCLSS
Trigger: AGAGGAAAGACACACTGGCAATGAAGTTGAACCACA...TAGAGGTAACAGATGCTCAAGATTATGACCGGCGAGCCGACAAACCTTGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCA +
Preference number: 3 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSLEPTH*GLTIRA
Trigger: TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAA...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GTTTCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCATTAGAGCCTACACATTaGGGTCTCACAATCAGGGCA +
Preference number: 3 (lower is better)
Translates to: VSNLVPYFIPLLLAFTRPLEPTH*GLTIRA
Trigger: TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAA...TGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGACTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTAC +
Preference number: 3 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRLKRTV*LCYERY
Trigger: GTACCTCTCGTAACACAGCAATACAGTCCTCTTGAG...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTTTGCTTGCCCTTCACTaGCTTCATGAGAAGAGGACA +
Preference number: 3 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGLLALH*LHEKRT
Trigger: TGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAA...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp GGTCTCCAGAAGGTTTTCCCCACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCCTACACATTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: GLQKVFPTRNWI*WLEFRAYTFGS
Trigger: AGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp GAAGTGGCATCCTTTGCTTGCCCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTTTTGGGAGGAAGTAAA +
Preference number: 3 (lower is better)
Translates to: EVASFACPSLAS*EEDKGLLGGSK
Trigger: TTTACTTCCTCCCAAAAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR TCA 72 bp TCTAAGGATGGTGGAAACTCAATTTCTGGCACAACTTaGAAAGTCTTAGCAGGGAATGGAGGGGTGCGTGGA +
Preference number: 3 (lower is better)
Translates to: SKDGGNSISGTT*KVLAGNGGVRG
Trigger: TCCACGCACCCCTCCATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATTGAGTTTCCACCATCCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp TTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTaGTGTGTTACGAGAGGTACAGTGCAATGCTTTCAT +
Preference number: 3 (lower is better)
Translates to: FLSGLSASRGLY*CVTRGTVQCFH
Trigger: ATGAAAGCATTGCACTGTACCTCTCGTAACACAGCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp CTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTGGCATTCCCTATGGGG +
Preference number: 3 (lower is better)
Translates to: LRLANLTGSSST*TGLDDLAFPMG
Trigger: CCCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: GQEFRFNSGSLGLWFNFIKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...AATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTTTAACATGGCATCGCTaGGCTTTCCTGGATCCTCAC +
Preference number: 3 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSLTWHR*AFLDPH
Trigger: GTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAA...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp CGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACGAGGACAAGGGTCTTTaGGGAGGAAGTAAAGGTGGT +
Preference number: 3 (lower is better)
Translates to: RISFHSSLLLQGQEFRFNEDKGL*GGSKGG
Trigger: ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC...GTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTTCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAA +
Preference number: 3 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPSFHSS*LLQGQE
Trigger: TTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGA...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp GGACTGTATTGCTGTGTTACGAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAGTGTGGTAAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: GLYCCVTRGTVQ*FHLICQCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCATTGCACTGTACCTCTCGTAACACAGCAATACAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp CAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGTGTGTCTTTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: QEFRFNSGSLGL*FNFIASVSFLF
Trigger: GAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTaGTTCACTGGGTCTGTGGTTCAACTTCATTGCCAG +
Preference number: 3 (lower is better)
Translates to: LAFTRPRIQVQL*FTGSVVQLHCQ
Trigger: CTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp AAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTGCCAAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 3 (lower is better)
Translates to: KNSGSTLVHWVCGSTSLPSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...TGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp TCATCGTCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGATTTCCCCACCAGGAATaGGATTTGATGGCTGGAATT +
Preference number: 3 (lower is better)
Translates to: SSSGTFSISIVMGRDLVRFPHQE*DLMAGI
Trigger: AATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAA...TCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CCA 72 bp AGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTaGAATTTAGAGCCTACACATTTGGGTCTCACAATC +
Preference number: 3 (lower is better)
Translates to: RRFSPPGIGFDG*NLEPTHLGLTI
Trigger: GATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGAATTTCTGGCACAACTaGAAAAGTCTTAGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: LAFTRPRIQVQLWFTGSVNFWHN*KSLSRE
Trigger: TTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATT...CACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCTTCCTCTCTCAACCTTaGGCATCATGGACGATGGTA +
Preference number: 3 (lower is better)
Translates to: ASKGKTPQACYNIERFKSFLSQP*ASWTMV
Trigger: TACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAA...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR-3UTR CAA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: ASKGKTPQACYNIERFKSKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR GCA 72 bp CTTTCTAGTGAGCCGACGTTTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATTTTTAGCCAAGTAGTG +
Preference number: 3 (lower is better)
Translates to: LSSEPTFNFSFF*LTISFIFSQVV
Trigger: CACTACTTGGCTAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR-3UTR CAA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCCCTCATCTAACCAATTaGGATTCTGGTTGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: ASKGKTPQACYNIERFKSPHLTN*DSGWSS
Trigger: TGAACTCCAACCAGAATCCAAATTGGTTAGATGAGG...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
3UTR-3UTR CAA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTAACTTGCTCTTCCTTTaGGTAGGAGGTGTTGTGTCT +
Preference number: 3 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLNLLFL*VGGVVS
Trigger: AGACACAACACCTCCTACCAAAAGGAAGAGCAAGTT...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR GCA 72 bp CAGCTCATAAATGCTCCCACAGAGTTGATACAACTCTaGTTTAAGGAGGAGAATACATTTATTGGTCGAAGT +
Preference number: 3 (lower is better)
Translates to: QLINAPTELIQL*FKEENTFIGRS
Trigger: ACTTCGACCAATAAATGTATTCTCCTCCTTAAAGCAGAGTTGTATCAACTCTGTGGGAGCATTTATGAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
3UTR TCA 72 bp CTAGTGAGCCGACGTTTAATTTCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTAGGTTGCAATATATTG +
Preference number: 3 (lower is better)
Translates to: LVSRRLISRFSA*RSASFLGCNIL
Trigger: CAATATATTGCAACCTAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR GCA 72 bp CTTTCTAGTGAGCCGACGTTTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATTTTTAGGTTGCAATAT +
Preference number: 3 (lower is better)
Translates to: LSSEPTFNFSFF*LTISFIFRLQY
Trigger: ATATTGCAACCTAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATTAAACGTCGGCTCACTAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR TCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTTGGAAGAGGGGCGGGTaGGGTGGAAGCTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSWKRGG*GGSCQR
Trigger: TCTCTGGCAGCTTCCACCTCACCCGCCCCTCTTCCA...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTTCCTACCTGGCCCGTTaGCCGCCAGGCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILASYLAR*PPGSSR
Trigger: CCGGCTGCTGCCTGGCGGCCAACGGGCCAGGTAGGA...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR TCA 90 bp GATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCTTGCCCTTCACTTTGGCAGGGACCATATaGGTGAGGCTTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: DEPCRAARGSGILCLPFTLAGTI*VRLGVA
Trigger: TGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAA...AGTGAAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGCCTTGTCAGCAGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATATCCGACCCAGCGTACTaGTGTCCTCAGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLVSRGQFGPRFVGSPVISDPAY*CPQKSC
Trigger: ACAGCTTTTCTGAGGACAGCAGTACGCTGGGTCGGA...TATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTTGCCGCCAGAGGAAGTaGCATCCTTTGCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGCRQRK*HPLLAL
Trigger: AAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCA...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTGGCTTGTGGCAGCAGTaGTGGCAGCGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGGLWQQ*WQRVLW
Trigger: CCACAGCACCCGCTGCCACCACTGCTGCCACAAGCC...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGGGCTTGTGGCAGCAGTaGTGGCAGCGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRGLWQQ*WQRVLW
Trigger: CCACAGCACCCGCTGCCACCACTGCTGCCACAAGCC...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTGGCTTGTGGCAGCAGTaGTGGCAGCGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTGLWQQ*WQRVLW
Trigger: CCACAGCACCCGCTGCCACCACTGCTGCCACAAGCC...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCGGTGCGTGGAGGCTCTaGAGGTATATGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSIGAWRL*RYMSRQ
Trigger: CTGCCTACTCATATACCTCCAGAGCCTCCACGCACC...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSARSHGK*AGEGLL
Trigger: CAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCT...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCGTAGACACTAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: WDLLNQSRSPSLLPPVDTRSHGK*AGEGLL
Trigger: CAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCT...AGTGTCTACGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGGTGTGGGAGTGGGCCTaGGCACAGGGGCTCAAAACG +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRVWEWA*AQGLKT
Trigger: CGTTTTGAGCCCCTGTGCTCAGGCCCACTCCCACAC...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR TCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTCTGGTCTTGAACTCCTaGACTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTLVLNS*TQVIHP
Trigger: CGGGTGGATCACCTGAGTTCAGGAGTTCAAGACCAG...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR TCA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTGGGAGCAGTGGGCCATaGTTGTGCCCTTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSGSSGP*LCPSCF
Trigger: GAAGCAAGAAGGGCACAATCATGGCCCACTGCTCCC...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR GCA 90 bp AGCCTTGTCAGCAGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATAGGAAGTGGCATCCTTTaGTTGCCCTTCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLVSRGQFGPRFVGSPVIGSGIL*LPFTCF
Trigger: GAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCC...TATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGTCTTTGCAAGGCTTGTaGCAGCAGTGGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQSLQGL*QQWWQR
Trigger: CCGCTGCCACCACTGCTGCCACAAGCCTTGCAAAGA...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCTTGTGGCAGAATGGAGGGGTGCGTaGAGGCTCTGGAGGTATATG +
Preference number: 4 (lower is better)
Translates to: GAGEGVTERLTVFARLVAEWRGA*RLWRYM
Trigger: CATATACCTCCAGAGCCTCCACGCACCCCTCCATTC...TGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGCCCGGAAATCCTACCTaGCCCGTTGGCCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLPGNPT*PVGRQA
Trigger: TGCCTGGCGGCCAACGGGCCAGGTAGGATTTCCGGG...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTTGGCAGGGACCATATaGGTGAGGCTTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RTCQILSFLSGLSASRGLLAGTI*VRLGVA
Trigger: TGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAA...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTTGGGAAGTGGGCTGGTaGGGGCCTGCTGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAWEVGW*GPAGFE
Trigger: TTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCA...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGTCTGGTGTTGGTCTTTaGCTCAGTCGCCGGATCAGT +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRSGVGL*LSRRIS
Trigger: ACTGATCCGGCGACTGAGTCAAAGACCAACACCAGA...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCGACAGTTGGCCTTTaGCTGAGCTTTCTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSATVGL*LSFLVS
Trigger: GCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGC...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTAGTGGGAGGATTGCTTaGGCCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTSGRIA*AWEAEV
Trigger: AACCTCTGCCTCCCAGGCTCAAGCAATCCTCCCACT...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR GCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTGTAGTGGGCTGGTCTaGTTCCTCAACTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTCSGLV*FLNCIW
Trigger: CCAGATGCAGTTGAGGAAGCAGACCAGCCCACTACA...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR GCA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGGGAGATGATGAACCTTaGCGTGCCGCCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RTCQILSFLSGLSASRGLGDDEP*RAARGS
Trigger: ACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCC...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSRQSPG*WGRGDR
Trigger: TCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCT...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: EDKGLLGGSKGGLGTFSGRQSPG*WGRGDR
Trigger: TCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCT...TCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGTGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLCWIRI*SGSGGS
Trigger: GCTGCCTCCACTCCCACTGCATATTCGAATCCAGCA...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGAGAGACCCTTTCCTATaGAGCACCCCACACCCAGCC +
Preference number: 4 (lower is better)
Translates to: VVRRLSLEVETLLSEGWGRDPFL*STPHPA
Trigger: GGCTGGGTGTGGGGTGCTGCATAGGAAAGGGTCTCT...CCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCTGCCGCCAGAGGAAGTaGCATCCTTTGCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CQILSFLSGLSASRGLYCCRQRK*HPLLAL
Trigger: AAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCA...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTCTTTGCAAGGCTTGTaGCAGCAGTGGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICSLQGL*QQWWQR
Trigger: CCGCTGCCACCACTGCTGCCACAAGCCTTGCAAAGA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGGGTGCGTGGAGGCTCTaGAGGTATATGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQGAWRL*RYMSRQ
Trigger: CTGCCTACTCATATACCTCCAGAGCCTCCACGCACC...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAGAATGGAGGGGTGCGTaGAGGCTCTGGAGGTATATG +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSAEWRGA*RLWRYM
Trigger: CATATACCTCCAGAGCCTCCACGCACCCCTCCATTC...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICSLSRE*RGAWRL
Trigger: GAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTGGCTCCCCAAAGTTCTaGTCCAGTATCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSGSPKF*SSILLG
Trigger: CCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCC...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTCTGGTGAGGGCCTGCTaGATTCGAATATGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASLVRAC*IRICSG
Trigger: CCCACTGCATATTCGAATCCAGCAGGCCCTCACCAG...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTRSHGK*AGEGLL
Trigger: CAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCT...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGCAGCAGGGGTCAGTTTaGTCCAAGGTTTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQQQGSV*SKVCRL
Trigger: GAGCCGACAAACCTTGGACCAAACTGACCCCTGCTG...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCTTGTGGCACCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GAGEGVTERLTVFARLVAPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...TGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGTCCATTTCCAGGGCTTaGAGATCTTGCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRSISRA*RSCQSL
Trigger: CAGGCTTTGGCAAGATCTTCAAGCCCTGGAAATGGA...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTTCCATTTCCAGGGCTTaGAGATCTTGCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSSISRA*RSCQSL
Trigger: CAGGCTTTGGCAAGATCTTCAAGCCCTGGAAATGGA...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGACTGGACTAGATaGTCTGGCATTCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTLDWTR*SGIPYG
Trigger: CCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAA...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTTGGCAGGGACCATATaGGTGAGGCTTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICLAGTI*VRLGVA
Trigger: TGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGGGGACTTCCTTTTTCTaGTCTTCCTGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLGTSFF*SSCWGI
Trigger: GATTCCCCAGCAGGAAGATCAGAAAAAGGAAGTCCC...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGTGGGAAGTGGGCTGGTaGGGGCCTGCTGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWWEVGW*GPAGFE
Trigger: TTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCA...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAATGGGAAGTGGGCTGGTaGGGGCCTGCTGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKWEVGW*GPAGFE
Trigger: TTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCA...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTTGGGAAGTGGGCTGGTaGGGGCCTGCTGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: GQEFRFNSGSLGLWFNFIWEVGW*GPAGFE
Trigger: TTCGAATCCAGCAGGCCCTCACCAGCCCACTTCCCA...AATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTTCTGGTGTTGGTCTTTaGCTCAGTCGCCGGATCAGT +
Preference number: 4 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASSGVGL*LSRRIS
Trigger: ACTGATCCGGCGACTGAGTCAAAGACCAACACCAGA...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAGCGACAGTTGGCCTTTaGCTGAGCTTTCTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSAATVGL*LSFLVS
Trigger: GCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGC...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTACAGGCGTGAGCCACTaGATCTGGCTAAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSTGVSH*IWLRLF
Trigger: AAAAAGCCTTAGCCAGATTCAGTGGCTCACGCCTGT...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR TCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGAGGCTGGTCTCAAAGTaGTCCTCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLRLVSK*SSHLGL
Trigger: GAGGCCGAGGTGGGAGGATCACTTTGAGACCAGCCT...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR GCA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTGGATCCTCACCACCTTaGTCAGGGTCTTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSGSSPP*SGSSNR
Trigger: TCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCC...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCGGAGATGATGAACCTTaGCGTGCCGCCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSGDDEP*RAARGS
Trigger: ACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCC...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAAAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKRQSPG*WGRGDR
Trigger: TCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCT...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAAAGGCAGAGTCCTGGGTaGTGGGGAAGGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKRQSPG*WGRGDR
Trigger: TCTGTCACCCCTTCCCCAGCACCCAGGACTCTGCCT...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGTGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQCWIRI*SGSGGS
Trigger: GCTGCCTCCACTCCCACTGCATATTCGAATCCAGCA...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCATGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSACWIRI*SGSGGS
Trigger: GCTGCCTCCACTCCCACTGCATATTCGAATCCAGCA...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCGTGGATGGACAGGTTTaGTCCTCTTCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSIVDGQV*SSSSSS
Trigger: CGATGAAGAAGAAGAGGAGCAAACCTGTCCATCCAC...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGAGGTGGAGATGATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCTGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GGGDDEPCRAARGSGILCCFHLI*QCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCA...GCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAG +
Preference number: 4 (lower is better)
Translates to: WEWRQPRGYMGLPKVLVQRGTVQ*FHLICQ
Trigger: CTGGCATATCAGATGAAAGCATTGCACTGTACCTCT...CTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTCCTCTCAGGCTTGAGTaGCTCAAGAGGACTGTATTG +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSPLRLE*LKRTVL
Trigger: CAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGG...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGGCTATTTCTGTGAGCTaGTTTAGGGGGAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRAISVS*FRGRDR
Trigger: CCTATCCCTCCCCCTAAACCAGCTCACAGAAATAGC...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGGGTGCGTGGAGGCTCTaGAGGTATATGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VVRRLSLEVETLLSEGWGGAWRL*RYMSRQ
Trigger: CTGCCTACTCATATACCTCCAGAGCCTCCACGCACC...CCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCAC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAASLSRE*RGAWRL
Trigger: GAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACT...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCAGTCTTAGCAGGGAATaGAGGGGTGCGTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGSLSRE*RGAWRL
Trigger: GAGCCTCCACGCACCCCTCCATTCCCTGCTAAGACT...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSDSNMQ*EWRQPR
Trigger: TCTAGGCTGCCTCCACTCCCACTGCATATTCGAATC...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTCTGGTGAGGGCCTGCTaGATTCGAATATGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTLVRAC*IRICSG
Trigger: CCCACTGCATATTCGAATCCAGCAGGCCCTCACCAG...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACCTGGTGAGGGCCTGCTaGATTCGAATATGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EDAILAVLGSAKVPSICHLVRAC*IRICSG
Trigger: CCCACTGCATATTCGAATCCAGCAGGCCCTCACCAG...GTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTACTGGTGAGGGCCTGCTaGATTCGAATATGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVLVRAC*IRICSG
Trigger: CCCACTGCATATTCGAATCCAGCAGGCCCTCACCAG...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTAGGAGTCATGGGAAGTaGGCTGGTGAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPRSHGK*AGEGLL
Trigger: CAGCAGGCCCTCACCAGCCCACTTCCCATGACTCCT...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCTTGCCCTTCACTCATCTCGGTACTGAATaGGACCTTCTGAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: DEPCRAARGSGILCLPFTHLGTE*DLLNQS
Trigger: ACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG...AGTGAAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTACCTCAGAATCTTCCTaGCAAGGAGTTCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSTSESS*QGVQRQ
Trigger: CTGTCGCTGAACTCCTTGCCAGGAAGATTCTGAGGT...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGAGGTGGAGATGATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GGGDDEPCRAARGSGILCSGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...GCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGACCCGGAAATCCTACCTaGCCCGTTGGCCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IAFLRLANLTGSSSTWTGPGNPT*PVGRQA
Trigger: TGCCTGGCGGCCAACGGGCCAGGTAGGATTTCCGGG...TCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGGGCTCTGTAGTGGGCTaGTCTGCTTCCTCAAATGGA +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQGSVVG*SASSNG
Trigger: TCCATTTGAGGAAGCAGACCAGCCCACTACAGAGCC...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTAGCCTCCCCAGTGGCTaGGACTACAAGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGSLPSG*DYKAQA
Trigger: GGCTTGTGCCTTGTAGTCCCAGCCACTGGGGAGGCT...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp GAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGGAGGCGAAGATaGGCAGATTCCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EDAILAVLGSAKVPSICHFGRRR*ADSLSP
Trigger: GGGGCTCAAGGAATCTGCCCATCTTCGCCTCCCAAA...GTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCGCGTGTTTCCCAGGCTaGTCTCAAAGTGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSACFPG*SQSDPP
Trigger: GGGAGGATCACTTTGAGACCAGCCTGGGAAACACGC...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR TCA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCTCCATTTCCAGGGCTTaGAGATCTTGCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CQILSFLSGLSASRGLYCSISRA*RSCQSL
Trigger: CAGGCTTTGGCAAGATCTTCAAGCCCTGGAAATGGA...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCATTGGCAGGGACCATATaGGTGAGGCTTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAALAGTI*VRLGVA
Trigger: TGCTACCCCAAGCCTCACTCATATGGTCCCTGCCAA...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTGGGTTGCTATTTCTGTaGGCTGGTTTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAGLLFL*AGLGGG
Trigger: CCCTCCCCCTAAACCAGCTCACAGAAATAGCAACCC...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCGGGTTGCTATTTCTGTaGGCTGGTTTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGGLLFL*AGLGGG
Trigger: CCCTCCCCCTAAACCAGCTCACAGAAATAGCAACCC...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAGGGTTGCTATTTCTGTaGGCTGGTTTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGESPGVDLRMVETQFLAGLLFL*AGLGGG
Trigger: CCCTCCCCCTAAACCAGCTCACAGAAATAGCAACCC...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACAGGTGTGTACCACTGCACCAGGCCCCTGCCGTGTAAAATGTTTGCTCTCTTCGGGACAGTTCAGCAATaGCAGGGTTGCTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TGVYHCTRPLPCKMFALFGTVQQ*QGCYFC
Trigger: ACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCC...GAAGAGAGCAAACATTTTACACGGCAGGGGCCTGGTGCAGTGGTACACACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR TCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGTTGGTGTTTTTGTGGTaGTGGCAGCAGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQLVFLW*WQQQTP
Trigger: TGGAGTCTGCTGCTGCCATCACCACAAAAACACCAA...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGTGTTTGCTCTCTTCATaGACCTCCATCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRCLLSS*TSISEL
Trigger: AAGCTCCGAGATGGAGGTTCATGAAGAGAGCAAACA...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGGSLEGIWGSPKFWSSITRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...GATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGCCTTGTCAGCAGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATATGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: SLVSRGQFGPRFVGSPVICNAFI*YASVVR
Trigger: TCTTACCACACTGGCATATCAGATGAAAGCATTGCA...TATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTGGAAGTGGCATCCTTTaGTTGCCCTTCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSGSGIL*LPFTCF
Trigger: GAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCC...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTTGCTGGATTCGAATATaGAGTGGGAGTGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTCWIRI*SGSGGS
Trigger: GCTGCCTCCACTCCCACTGCATATTCGAATCCAGCA...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTGGGCTGGTGAGGGCCTaGTGGATTCGAATATGCAGT +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTGLVRA*WIRICS
Trigger: ACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCC...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp GATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCTTGCCCTTCACTCATTCCACTCCTCCTTaGTTTTACAAGGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: DEPCRAARGSGILCLPFTHSTPP*FYKAKN
Trigger: ATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATG...AGTGAAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGCCTCTCAGGCTTGAGTaGCTCAAGAGGACTGTATTG +
Preference number: 4 (lower is better)
Translates to: RTCQILSFLSGLSASRGLPLRLE*LKRTVL
Trigger: CAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGG...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCATGTAGTGGGCTGGTCTaGTTCCTCTACTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSACSGLV*FLYCSK
Trigger: CTTGGAACAGTAGAGGAAGCAGACCAGCCCACTACA...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTATCGCTTGGCTTTCCTaGATCCTCACCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICIAWLS*ILTTLL
Trigger: GAGCAAGGTGGTGAGGATCCAGGAAAGCCAAGCGAT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCATCGCTTGGCTTTCCTaGATCCTCACCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVIAWLS*ILTTLL
Trigger: GAGCAAGGTGGTGAGGATCCAGGAAAGCCAAGCGAT...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTCCTATGGGGGTGGTATaGCCATTCTTTAACATGGCA +
Preference number: 4 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTPMGVV*PFFNMA
Trigger: TGCCATGTTAAAGAATGGCCATACCACCCCCATAGG...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCCTATGGGGGTGGTATaGCCATTCTTTAACATGGCA +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLPMGVV*PFFNMA
Trigger: TGCCATGTTAAAGAATGGCCATACCACCCCCATAGG...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTTCTTTGCAAGGCTTGTaGCAGCAGTGGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GQEFRFNSGSLGLWFNFISLQGL*QQWWQR
Trigger: CCGCTGCCACCACTGCTGCCACAAGCCTTGCAAAGA...AATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CATGAGAAGAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTTTGCAAGGCTTGTaGCAGCAGTGGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HEKRTRVFWEEVKVVWVHSLQGL*QQWWQR
Trigger: CCGCTGCCACCACTGCTGCCACAAGCCTTGCAAAGA...ATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTCTTCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CATCTCGGTACTGAATGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTGGTGCGTGGAGGCTCTaGAGGTATATGAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: HLGTEWDLLNQSRSPSLLGAWRL*RYMSRQ
Trigger: CTGCCTACTCATATACCTCCAGAGCCTCCACGCACC...AAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAGGCTCCCCAAAGTTCTaGTCCAGTATCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AGESPGVDLRMVETQFLAGSPKF*SSILLG
Trigger: CCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCC...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTGAGATCATTGGTAGTAGTTCCGAGCCCATAGAACACGTGCTCTTCTCTCTTGGCTCCCCAAAGTTCTaGTCCAGTATCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GEIIGSSSEPIEHVLFSLGSPKF*SSILLG
Trigger: CCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCC...AAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGATCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTAGCCTAGAGGGTATATaGGGCTCCCCAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTSLEGI*GSPKFW
Trigger: CCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCT...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTAGCCTAGAGGGTATATaGGGCTCCCCAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICSLEGI*GSPKFW
Trigger: CCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCCTCTTTCCTCTTCACTTTGTTaGCGAGAGCACTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: RQPRGYMGLPKVLVQYPLSSSLC*REHSDS
Trigger: GCTATCAGAGTGCTCTCGCCAACAAAGTGAAGAGGA...AAGAGGATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTACCTCAGAATCTTCCTaGCAAGGAGTTCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASTSESS*QGVQRQ
Trigger: CTGTCGCTGAACTCCTTGCCAGGAAGATTCTGAGGT...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AGCCTTGTCAGCAGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATAAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SLVSRGQFGPRFVGSPVISGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...TATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCTTGCCCTTCACTCTTTTATCAGAAGGTTaGGGGTCTCCAGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: DEPCRAARGSGILCLPFTLLSEG*GSPEGF
Trigger: AAAACCTTCTGGAGACCCCCAACCTTCTGATAAAAG...AGTGAAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCAATCTCCGCCTCCTaGGTTCAAGCGACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILAISAS*VQATLL
Trigger: CAGGAGAGTCGCTTGAACCCAGGAGGCGGAGATTGC...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR TCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSAPSLAS*EEDKGL
Trigger: AAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGG...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAGGGTTGCTATTTCTGTaGGCTGGTTTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRGLLFL*AGLGGG
Trigger: CCCTCCCCCTAAACCAGCTCACAGAAATAGCAACCC...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CACCGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAGGGACTTCCTTTTTCTaGTCTTCCTGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: HRAWPHLTNLDSGWSSGKGTSFF*SSCWGI
Trigger: GATTCCCCAGCAGGAAGATCAGAAAAAGGAAGTCCC...TTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp CACCGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAACTGAATGGGACCTTCTaGATCAGAGTCGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HRAWPHLTNLDSGWSSGKLNGTF*IRVALL
Trigger: AAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAG...TTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGTCTGGTGTTGGTCTTTaGCTCAGTCGCCGGATCAGT +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMSGVGL*LSRRIS
Trigger: ACTGATCCGGCGACTGAGTCAAAGACCAACACCAGA...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAGGATCCTCACCACCTTaGTCAGGGTCTTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: EDKGLLGGSKGGLGTFSGGSSPP*SGSSNR
Trigger: TCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCC...TCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAGGAGATGATGAACCTTaGCGTGCCGCCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPRGDDEP*RAARGS
Trigger: ACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCC...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTGGAGATGATGAACCTTaGCGTGCCGCCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTGDDEP*RAARGS
Trigger: ACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCC...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGTGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCTTGTGGCAGAGATTAACAGTCTTTaGAAGGCTTGTGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GAGEGVTERLTVFARLVAEINSL*KACGSS
Trigger: ACTGCTGCCACAAGCCTTGCAAAGACTGTTAATCTC...TGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGCTGGTGAGGGCCTaGTGGATTCGAATATGCAGT +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLGLVRA*WIRICS
Trigger: ACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCC...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTGGGCTGGTGAGGGCCTaGTGGATTCGAATATGCAGT +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSGLVRA*WIRICS
Trigger: ACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCC...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTGCAAACTGTGTCTCTaGACAGGCAGTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICCKLCL*TGSHLG
Trigger: CCCTAGATGACTGCCTGTGCAGAGACACAGTTTGCA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTTGCAAACTGTGTCTCTaGACAGGCAGTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: TFGSHNQGRAGKANGANCCKLCL*TGSHLG
Trigger: CCCTAGATGACTGCCTGTGCAGAGACACAGTTTGCA...ACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTTTCAAGCGACTCTCCTaGCTCAGCGTCCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAFKRLS*LSVLSS
Trigger: ACTACTCAGGACGCTGAGGCAGGAGAGTCGCTTGAA...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR GCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCATGTAGTGGGCTGGTCTaGTTCCTCTTAGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAACSGLV*FLLGQV
Trigger: CACCTGACCTAAGAGGAAGCAGACCAGCCCACTACA...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTATCGCTTGGCTTTCCTaGATCCTCACCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGIAWLS*ILTTLL
Trigger: GAGCAAGGTGGTGAGGATCCAGGAAAGCCAAGCGAT...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATGCCGCCAGAGGAAGTaGCATCCTTTGCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQCRQRK*HPLLAL
Trigger: AAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCA...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTAGCTATTTCTGTGAGCTaGTTTAGGGGGAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVAISVS*FRGRDR
Trigger: CCTATCCCTCCCCCTAAACCAGCTCACAGAAATAGC...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGCTATTTCTGTGAGCTaGTTTAGGGGGAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTAISVS*FRGRDR
Trigger: CCTATCCCTCCCCCTAAACCAGCTCACAGAAATAGC...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTCCACTGTTTATTGCTTaGGACAGTTCAGCAATGACA +
Preference number: 4 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGPLFIA*DSSAMT
Trigger: TGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGG...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGAATGGAGGGGTGCGTaGAGGCTCTGGAGGTATATG +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLEWRGA*RLWRYM
Trigger: CATATACCTCCAGAGCCTCCACGCACCCCTCCATTC...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAGAATGGAGGGGTGCGTaGAGGCTCTGGAGGTATATG +
Preference number: 4 (lower is better)
Translates to: SNLVPYFIPLLLAFTRPREWRGA*RLWRYM
Trigger: CATATACCTCCAGAGCCTCCACGCACCCCTCCATTC...TCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGCTCCCCAAAGTTCTaGTCCAGTATCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFGSPKF*SSILLG
Trigger: CCCCAAGAGGATACTGGACCAGAACTTTGGGGAGCC...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGAGCCTAGAGGGTATATaGGGCTCCCCAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMSLEGI*GSPKFW
Trigger: CCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCT...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVGSLGL*FNFIAS
Trigger: ACTGGCAATGAAGTTGAACCACAGACCCAGTGAACC...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTGAGTTCAGCGACAGTTaGCCTTTGACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSEFSDS*PLTELS
Trigger: AGAAAGCTCAGTCAAAGGCCAACTGTCGCTGAACTC...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGCAGCAGGGGTCAGTTTaGTCCAAGGTTTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILQQGSV*SKVCRL
Trigger: GAGCCGACAAACCTTGGACCAAACTGACCCCTGCTG...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTCAGCAGGGGTCAGTTTaGTCCAAGGTTTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSQQGSV*SKVCRL
Trigger: GAGCCGACAAACCTTGGACCAAACTGACCCCTGCTG...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTCAACCTTTGGCATCATaGACGATGGTAGCGTGTAAA +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSQPLAS*TMVACK
Trigger: TTTACACGCTACCATCGTCCATGATGCCAAAGGTTG...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTCCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGCAGCCAGTAAAACCTaGAACCTGCAAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTAASKT*NLQVVQ
Trigger: CTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGC...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 4 (lower is better)
Translates to: WEWRQPRGYMGLPKVLVQIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...CTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGCAACCTTTGGCATCATaGACGATGGTAGCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVQPLAS*TMVACF
Trigger: GAAACACGCTACCATCGTCCATGATGCCAAAGGTTG...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR TCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGTTGGACTGGACTAGATaGTCTGGCATTCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRLDWTR*SGIPYG
Trigger: CCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAA...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTGGGACAGTTCAGCAATaGCAGGGTTGCTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICGTVQQ*QGCYFC
Trigger: ACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCC...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGATTGGTGTTTTTGTGGTaGTGGCAGCAGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: EDKGLLGGSKGGLGTFSGLVFLW*WQQQTP
Trigger: TGGAGTCTGCTGCTGCCATCACCACAAAAACACCAA...TCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCACTGAATGGGACCTTCTaGATCAGAGTCGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAALNGTF*IRVALL
Trigger: AAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAG...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCACTGAATGGGACCTTCTaGATCAGAGTCGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSLNGTF*IRVALL
Trigger: AAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAG...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATCTGGTGTTGGTCTTTaGCTCAGTCGCCGGATCAGT +
Preference number: 4 (lower is better)
Translates to: KAKNSGSTLVHWVCGSTSSGVGL*LSRRIS
Trigger: ACTGATCCGGCGACTGAGTCAAAGACCAACACCAGA...TGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCGACAGTTGGCCTTTaGCTGAGCTTTCTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILATVGL*LSFLVS
Trigger: GCTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGC...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTATGTTTGCTCTCTTCATaGACCTCCATCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVCLLSS*TSISEL
Trigger: AAGCTCCGAGATGGAGGTTCATGAAGAGAGCAAACA...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACAGGTGTGTACCACTGCACCAGGCCCCTGCCGTGTAAAATGTTTGCTCTCTTCAAGGTTCAAAAGCACTaGCAAAGTGTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TGVYHCTRPLPCKMFALFKVQKH*QSVVLP
Trigger: GGGCAAAACAACACTTTGTCAGTGCTTTTGAACCTT...GAAGAGAGCAAACATTTTACACGGCAGGGGCCTGGTGCAGTGGTACACACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR TCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQTRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCGTAGACACTACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: WDLLNQSRSPSLLPPVDTTRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...AGTGTCTACGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGAGGTGTTGTGTCTCCTaGTTCCACACTGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWRCCVS*FHTVQD
Trigger: GTCCTGGACAGTGTGGAAGCAGGAGACACAACACCT...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTGGATCCTCACCACCTTaGTCAGGGTCTTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSGSSPP*SGSSNR
Trigger: TCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCC...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGATCCTCACCACCTTaGTCAGGGTCTTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRAGSSPP*SGSSNR
Trigger: TCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCC...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTGGAAGTGGCATCCTTTaGTTGCCCTTCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAGSGIL*LPFTCF
Trigger: GAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCC...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAGGAAGTGGCATCCTTTaGTTGCCCTTCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGESPGVDLRMVETQFLAGSGIL*LPFTCF
Trigger: GAAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCC...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAGAGATTAACAGTCTTTaGAAGGCTTGTGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSAEINSL*KACGSS
Trigger: ACTGCTGCCACAAGCCTTGCAAAGACTGTTAATCTC...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTGAGATTAACAGTCTTTaGAAGGCTTGTGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASEINSL*KACGSS
Trigger: ACTGCTGCCACAAGCCTTGCAAAGACTGTTAATCTC...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GCCCATAGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGGGCTGGTGAGGGCCTaGTGGATTCGAATATGCAGT +
Preference number: 4 (lower is better)
Translates to: AHRTRALLSFITWCFCGDGLVRA*WIRICS
Trigger: ACTGCATATTCGAATCCAGCAGGCCCTCACCAGCCC...ATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTTCCGACCCAGCGTACTaGTGTCCTCAGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPSDPAY*CPQKSC
Trigger: ACAGCTTTTCTGAGGACAGCAGTACGCTGGGTCGGA...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTTCCGACCCAGCGTACTaGTGTCCTCAGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGSDPAY*CPQKSC
Trigger: ACAGCTTTTCTGAGGACAGCAGTACGCTGGGTCGGA...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTCATTCCACTCCTCCTTaGTTTTACAAGGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSHSTPP*FYKAKN
Trigger: ATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATG...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ATCCTCACCACCTTGCTCAGGGTCTTCCAACAGAACCCCTCTTTTAACCAGCTCGTGTTTCCAATCTGGTaGCGTATTTCATTCCACTCC +
Preference number: 4 (lower is better)
Translates to: ILTTLLRVFQQNPSFNQLVFPIW*RISFHS
Trigger: GGAGTGGAATGAAATACGGCACCAGATTGGAAACAC...GAGCTGGTTAAAAGAGGGGTTCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTTGCAAACTGTGTCTCTaGACAGGCAGTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILACKLCL*TGSHLG
Trigger: CCCTAGATGACTGCCTGTGCAGAGACACAGTTTGCA...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGTCAAGAGGACTGTATTaGTGTGTTACGAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLSRGLY*CVTRGT
Trigger: TGTACCTCTCGTAACACAGCAATACAGTCCTCTTGA...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGCTGGATTTACCGGTCTaGAGACATCAGCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRLDLPV*RHQLVP
Trigger: TGGGACAAGCTGATGTCTCCAGACCGGTAAATCCAG...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR CCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCTTCCTCAACTGCATCTaGATTTACCGGTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVFLNCI*IYRSGD
Trigger: GTCTCCAGACCGGTAAATCCAGATGCAGTTGAGGAA...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTATCTGGCATTCCCTATaGGGGTGGTATGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAIWHSL*GWYGHS
Trigger: AGAATGGCCATACCACCCCCATAGGGAATGCCAGAT...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTGAGATCATTGGTAGTAGTTCCGAGCCCATAGAACACGTGCTCTTCTCTCTTATCTGGCATTCCCTATaGGGGTGGTATGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: GEIIGSSSEPIEHVLFSLIWHSL*GWYGHS
Trigger: AGAATGGCCATACCACCCCCATAGGGAATGCCAGAT...AAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTG +
Preference number: 4 (lower is better)
Translates to: TFGSHNQGRAGKANGANCGSSST*TGLDDL
Trigger: CAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCC...ACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGAGGACAAGGGTCTTTTaGGAGGAAGTAAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVRTRVF*EEVKVV
Trigger: AACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCT...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTGGCTTGTGGCAGCAGTaGTGGCAGCGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCGLWQQ*WQRVLW
Trigger: CCACAGCACCCGCTGCCACCACTGCTGCCACAAGCC...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCCACTGTTTATTGCTTaGGACAGTTCAGCAATGACA +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLPLFIA*DSSAMT
Trigger: TGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGG...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTGCTGGGGAATCTCCTaGTGTAGATCTAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: EDAILAVLGSAKVPSICHCWGIS*CRSKDG
Trigger: ACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA...GTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGAGCCTAGAGGGTATATaGGGCTCCCCAAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILSLEGI*GSPKFW
Trigger: CCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCT...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSDSNMQ*EWRQPR
Trigger: TCTAGGCTGCCTCCACTCCCACTGCATATTCGAATC...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTCCTCTTCACTTTGTTaGCGAGAGCACTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICSSSLC*REHSDS
Trigger: GCTATCAGAGTGCTCTCGCCAACAAAGTGAAGAGGA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CACCGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HRAWPHLTNLDSGWSSGKGSLGL*FNFIAS
Trigger: ACTGGCAATGAAGTTGAACCACAGACCCAGTGAACC...TTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGT +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTGSLGL*FNFIAS
Trigger: ACTGGCAATGAAGTTGAACCACAGACCCAGTGAACC...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTAGTGTGTTTCCAATCTaGTGCCGTATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTSVFPI*CRISFH
Trigger: GTGGAATGAAATACGGCACCAGATTGGAAACACACT...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGAGTGTGTTTCCAATCTaGTGCCGTATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRSVFPI*CRISFH
Trigger: GTGGAATGAAATACGGCACCAGATTGGAAACACACT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGTTAATTCTTTTCTTATaGCAGCCTTGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLLILFL*QPCQQG
Trigger: CCCCTGCTGACAAGGCTGCCATAAGAAAAGAATTAA...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTTTAATTCTTTTCTTATaGCAGCCTTGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSHNQGRAGKANGANCVSLILFL*QPCQQG
Trigger: CCCCTGCTGACAAGGCTGCCATAAGAAAAGAATTAA...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTACAATTCTGGCTGTGCTaGGAAGTGCTAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVQFWLC*EVLKFP
Trigger: AGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTG...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: CQILSFLSGLSASRGLYCGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTCCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAGCAGCCAGTAAAACCTaGAACCTGCAAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSAASKT*NLQVVQ
Trigger: CTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGC...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGCTCTGTAGTGGGCTaGTCTGCTTCCTCTACTGTT +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFGSVVG*SASSTV
Trigger: AACAGTAGAGGAAGCAGACCAGCCCACTACAGAGCC...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR CCA 90 bp ATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGACTAATCCCAGCACTTTaGGAGGCCAAGCGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: IAFLRLANLTGSSSTWTGLIPAL*EAKRGL
Trigger: CAACCCCCGCTTGGCCTCCCAAAGTGCTGGGATTAG...TCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632421.1
3UTR CAA 72 bp CCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAAACTCCTCAAGCATGC +
Preference number: 4 (lower is better)
Translates to: PVKPGTCKWFRT*VASKGKTPQAC
Trigger: GCATGCTTGAGGAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CAA 72 bp CTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTACAGTGCAATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LPLRLECLKRTV*LCYERYSAMLS
Trigger: TGAAAGCATTGCACTGTACCTCTCGTAACACAGCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CAA 72 bp TTCCAGGGCTTGAAGATCTTGCCAAAGCCTGAGAACTaGCTCTTCCTTTTGGTAGGAGGTGTTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FQGLKILPKPEN*LFLLVGGVVSP
Trigger: AGGAGACACAACACCTCCTACCAAAAGGAAGAGCAAGTTCTCAGGCTTTGGCAAGATCTTCAAGCCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR TCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGGTTTCCCATACAGCCTaGGCACTTGCAGTTCTTACA +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMVSHTA*ALAVLT
Trigger: TGTAAGAACTGCAAGTGCTCAGGCTGTATGGGAAAC...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR TCA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATCCATTTCCAGGGCTTaGAGATCTTGCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQSISRA*RSCQSL
Trigger: CAGGCTTTGGCAAGATCTTCAAGCCCTGGAAATGGA...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCACCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSPSLAS*EEDKGL
Trigger: AAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGG...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCGGGACAGTTCAGCAATaGCAGGGTTGCTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGGTVQQ*QGCYFC
Trigger: ACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCC...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCCTCTTATTTCTGGCACAACTTaGAAAGTCTTAGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: RQPRGYMGLPKVLVQYPLISGTT*KVLAGN
Trigger: ATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAAT...AAGAGGATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAAGGGACTTCCTTTTTCTaGTCTTCCTGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKGTSFF*SSCWGI
Trigger: GATTCCCCAGCAGGAAGATCAGAAAAAGGAAGTCCC...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTGGGACTTCCTTTTTCTaGTCTTCCTGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGGTSFF*SSCWGI
Trigger: GATTCCCCAGCAGGAAGATCAGAAAAAGGAAGTCCC...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGTCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTA +
Preference number: 4 (lower is better)
Translates to: GLTIRAGQVRLMVQTVSLSRFSA*RSASFL
Trigger: TAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGA...CAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTTGTTTGCTCTCTTCATaGACCTCCATCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTCLLSS*TSISEL
Trigger: AAGCTCCGAGATGGAGGTTCATGAAGAGAGCAAACA...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTACCAGGAATTGGATTTaGTGGCTGGAATTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTTRNWI*WLEFRA
Trigger: GGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGT...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCATGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSACNAFI*YASVVR
Trigger: TCTTACCACACTGGCATATCAGATGAAAGCATTGCA...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCACTCAGGAACAGACTCTaGTTCAGAATTAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAALRNRL*FRIRLA
Trigger: AGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAG...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCTCAGGAACAGACTCTaGTTCAGAATTAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMLRNRL*FRIRLA
Trigger: AGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAG...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTGCTTGCCCTTCACTTaGTTCATGAGAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICCLPFT*FMRRGQ
Trigger: TTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACGTGTTTCCAATCTGGTaGCGTATTTCATTCCACTCC +
Preference number: 4 (lower is better)
Translates to: EDAILAVLGSAKVPSICHVFPIW*RISFHS
Trigger: GGAGTGGAATGAAATACGGCACCAGATTGGAAACAC...GTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAATGCTACATTCAAAGTaGTGTCCACCTCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSAMLHSK*CPPQKI
Trigger: GATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTGCAAACTGTGTCTCTaGACAGGCAGTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSCKLCL*TGSHLG
Trigger: CCCTAGATGACTGCCTGTGCAGAGACACAGTTTGCA...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTAGTGGGCTGGTCTaGTTCCTCAAATGGATCTTC +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGCSGLV*FLKWIF
Trigger: GAAGATCCATTTGAGGAAGCAGACCAGCCCACTACA...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGCCTATGGGGGTGGTATaGCCATTCTTTAACATGGCA +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRPMGVV*PFFNMA
Trigger: TGCCATGTTAAAGAATGGCCATACCACCCCCATAGG...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GAGGACAAGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTG +
Preference number: 4 (lower is better)
Translates to: EDKGLLGGSKGGLGTFSGGSSST*TGLDDL
Trigger: CAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCC...TCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTGAAGTAAAGGTGGTTTaGGTACATTCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASEVKVV*VHSQEQ
Trigger: CTGTTCCTGAGAATGTACCCAAACCACCTTTACTTC...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCAGCCATGTTGATTCCTCTCTCAACCTTTGGCATCATGGACGATGGTAGCGTGGAAGTAAAGGTGGTTTaGGTACATTCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: AAMLIPLSTFGIMDDGSVEVKVV*VHSQEQ
Trigger: CTGTTCCTGAGAATGTACCCAAACCACCTTTACTTC...CACGCTACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAATCAACATGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGAGGACAAGGGTCTTTTaGGAGGAAGTAAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VVRRLSLEVETLLSEGWGRTRVF*EEVKVV
Trigger: AACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCT...CCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTCATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTHMSEA*GSSSVS
Trigger: ACTAACACTACTGCTACCCCAAGCCTCACTCATATG...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTCATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTHMSEA*GSSSVS
Trigger: ACTAACACTACTGCTACCCCAAGCCTCACTCATATG...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGGCAGCGCTATTTCTGTGAGCTaGTTTAGGGGGAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: RTRALLSFITWCFCGDGSAISVS*FRGRDR
Trigger: CCTATCCCTCCCCCTAAACCAGCTCACAGAAATAGC...GCTGCCATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRADSNMQ*EWRQPR
Trigger: TCTAGGCTGCCTCCACTCCCACTGCATATTCGAATC...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTGATTCGAATATGCAGTaGGAGTGGAGGCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPDSNMQ*EWRQPR
Trigger: TCTAGGCTGCCTCCACTCCCACTGCATATTCGAATC...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTTTCACTGAATGTGGATaGACAGGTTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTFTECG*TGLLLF
Trigger: GAAGAGGAGCAAACCTGTCCATCCACATTCAGTGAA...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTCACTGAATGTGGATaGACAGGTTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EDAILAVLGSAKVPSICHFTECG*TGLLLF
Trigger: GAAGAGGAGCAAACCTGTCCATCCACATTCAGTGAA...GTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCTCCTCTTCACTTTGTTaGCGAGAGCACTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGSSSLC*REHSDS
Trigger: GCTATCAGAGTGCTCTCGCCAACAAAGTGAAGAGGA...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTGAGTTCAGCGACAGTTaGCCTTTGACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAEFSDS*PLTELS
Trigger: AGAAAGCTCAGTCAAAGGCCAACTGTCGCTGAACTC...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGGAGTTCAGCGACAGTTaGCCTTTGACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQREFSDS*PLTELS
Trigger: AGAAAGCTCAGTCAAAGGCCAACTGTCGCTGAACTC...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGACCTCAGAATCTTCCTaGCAAGGAGTTCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLTSESS*QGVQRQ
Trigger: CTGTCGCTGAACTCCTTGCCAGGAAGATTCTGAGGT...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGACCTCAGAATCTTCCTaGCAAGGAGTTCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQTSESS*QGVQRQ
Trigger: CTGTCGCTGAACTCCTTGCCAGGAAGATTCTGAGGT...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCCAACCTTTGGCATCATaGACGATGGTAGCGTGTAAA +
Preference number: 4 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSQPLAS*TMVACK
Trigger: TTTACACGCTACCATCGTCCATGATGCCAAAGGTTG...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCCAACCTTTGGCATCATaGACGATGGTAGCGTGTAAA +
Preference number: 4 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVQPLAS*TMVACK
Trigger: TTTACACGCTACCATCGTCCATGATGCCAAAGGTTG...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCCTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVLHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSASGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTGCAGCCAGTAAAACCTaGAACCTGCAAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSAASKT*NLQVVQ
Trigger: CTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGC...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCAGTCTGCTTCCTCAAATaGATCTTCCATGCCACTATT +
Preference number: 4 (lower is better)
Translates to: SHNQGRAGKANGANCVSAVCFLK*IFHATI
Trigger: AATAGTGGCATGGAAGATCCATTTGAGGAAGCAGAC...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTGTGAACCACCATGCCTaGCCTAGGTTTTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICVNHHA*PRFCFE
Trigger: TTCAAAACAAAACCTAGGCCAGGCATGGTGGTTCAC...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCACTACTTAGACTGAAGTaGGAGGATTGCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAALLRLK*EDCLSL
Trigger: CAGGCTCAAGCAATCCTCCCACTTCAGTCTAAGTAG...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTAAACCCCATCTCAAATaGATCTTCCATGCCACTATT +
Preference number: 4 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTKPHLK*IFHATI
Trigger: AATAGTGGCATGGAAGATCCATTTGAGATGGGGTTT...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR TCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAGGTCAGTTCATCTGCTaGAGTTTCTGTTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAAGQFIC*SFCFPY
Trigger: GTATGGGAAACAGAAACTTCAGCAGATGAACTGACC...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR TCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGGATCTTGCCAAAGCCTaGGAACTTGCTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMDLAKA*ELALPF
Trigger: AAAAGGAAGAGCAAGTTCTCAGGCTTTGGCAAGATC...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGGGACAGTTCAGCAATaGCAGGGTTGCTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LAFTRPRIQVQLWFTGSVGTVQQ*QGCYFC
Trigger: ACAGAAATAGCAACCCTGTCATTGCTGAACTGTCCC...CACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGATTTCTGGCACAACTTaGAAAGTCTTAGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQISGTT*KVLAGN
Trigger: ATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAAT...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCATTTCTGGCACAACTTaGAAAGTCTTAGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: CQILSFLSGLSASRGLYCISGTT*KVLAGN
Trigger: ATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAAT...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTCTTCATCTCGGTACTaGATGGGACCTTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGSSSRY*MGPSES
Trigger: TGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGA...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCTCTTCATCTCGGTACTaGATGGGACCTTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGSSSRY*MGPSES
Trigger: TGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGA...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGTCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTA +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQSRFSA*RSASFL
Trigger: TAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGA...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTGTTTGCTCTCTTCATaGACCTCCATCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLCLLSS*TSISEL
Trigger: AAGCTCCGAGATGGAGGTTCATGAAGAGAGCAAACA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTAAGGTTCAAAAGCACTaGCAAAGTGTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTKVQKH*QSVVLP
Trigger: GGGCAAAACAACACTTTGTCAGTGCTTTTGAACCTT...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCACCAGTTTAGGGAGGTaGGATACTGTTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGTSLGR*DTVSRS
Trigger: AGATCTGGAAACAGTATCTCACCTCCCTAAACTGGT...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCCAGCACCAGTTTAGGGAGGTaGGATACTGTTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SGTFSISIVMGRDLVRPSTSLGR*DTVSRS
Trigger: AGATCTGGAAACAGTATCTCACCTCCCTAAACTGGT...GCTGGGTCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTATGCTCCCACAGAGTTaGTACAACTCTGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGMLPQS*YNSALR
Trigger: CCTTAAAGCAGAGTTGTATCAACTCTGTGGGAGCAT...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR GCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTCTCTTTCAGTGTCACTaGCAAACATCAGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTLFQCH*QTSGNG
Trigger: GCCATTTCCTGATGTTTGGCAGTGACACTGAAAGAG...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR GCA 90 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGCTCAGGAACAGACTCTaGTTCAGAATTAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LAFTRPRIQVQLWFTGSVLRNRL*FRIRLA
Trigger: AGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAG...CACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTTGCTTGCCCTTCACTTaGTTCATGAGAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTCLPFT*FMRRGQ
Trigger: TTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCA...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTTGTACCACTGTTTATTaGTTGGGACAGTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASCTTVY*LGQFSN
Trigger: ATTGCTGAACTGTCCCAAGCAATAAACAGTGGTACA...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGTGGATGGACAGGTTTaGTCCTCTTCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILVDGQV*SSSSSS
Trigger: CGATGAAGAAGAAGAGGAGCAAACCTGTCCATCCAC...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGTGGATGGACAGGTTTaGTCCTCTTCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWVDGQV*SSSSSS
Trigger: CGATGAAGAAGAAGAGGAGCAAACCTGTCCATCCAC...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTGGATGGACAGGTTTaGTCCTCTTCTTCTTCATCG +
Preference number: 4 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQVDGQV*SSSSSS
Trigger: CGATGAAGAAGAAGAGGAGCAAACCTGTCCATCCAC...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTTGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTCFHLI*QCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCA...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCTGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSCFHLI*QCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCA...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAG +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICRGTVQ*FHLICQ
Trigger: CTGGCATATCAGATGAAAGCATTGCACTGTACCTCT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGAGGTACAGTGCAATaGTTTCATCTGATATGCCAG +
Preference number: 4 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSRGTVQ*FHLICQ
Trigger: CTGGCATATCAGATGAAAGCATTGCACTGTACCTCT...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCATCGTCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCTCTCAGGCTTGAGTaGCTCAAGAGGACTGTATTG +
Preference number: 4 (lower is better)
Translates to: SSSGTFSISIVMGRDLVRPLRLE*LKRTVL
Trigger: CAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGG...TCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAACCTATGGGGGTGGTATaGCCATTCTTTAACATGGCA +
Preference number: 4 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKPMGVV*PFFNMA
Trigger: TGCCATGTTAAAGAATGGCCATACCACCCCCATAGG...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTG +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFGSSST*TGLDDL
Trigger: CAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCC...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGGCTCTTCCTCTACTTaGACTGGACTAGATGATCTG +
Preference number: 4 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQGSSST*TGLDDL
Trigger: CAGATCATCTAGTCCAGTCCAAGTAGAGGAAGAGCC...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTAGGACAAGGGTCTTTTaGGAGGAAGTAAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILARTRVF*EEVKVV
Trigger: AACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCT...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCATGCTGGGGAATCTCCTaGTGTAGATCTAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRACWGIS*CRSKDG
Trigger: ACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGTGCTGGGGAATCTCCTaGTGTAGATCTAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILCWGIS*CRSKDG
Trigger: ACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTTTCACTGAATGTGGATaGACAGGTTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAFTECG*TGLLLF
Trigger: GAAGAGGAGCAAACCTGTCCATCCACATTCAGTGAA...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGAGTTCAGCGACAGTTaGCCTTTGACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFEFSDS*PLTELS
Trigger: AGAAAGCTCAGTCAAAGGCCAACTGTCGCTGAACTC...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTTAATTCTTTTCTTATaGCAGCCTTGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PEDAILAVLGSAKVPSICLILFL*QPCQQG
Trigger: CCCCTGCTGACAAGGCTGCCATAAGAAAAGAATTAA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCACAATTCTGGCTGTGCTaGGAAGTGCTAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRAQFWLC*EVLKFP
Trigger: AGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTG...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTCAATTCTGGCTGTGCTaGGAAGTGCTAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTQFWLC*EVLKFP
Trigger: AGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTG...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 72 bp ATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: IGFDGWNLEPTH*GLTIRAGQVRL
Trigger: TAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
3UTR CAA 72 bp TCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCTTCACTTTGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: STLVHWVCGSTS*PVCLSSSLCWR
Trigger: TCGCCAACAAAGTGAAGAGGAAAGACACACTGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAAGATCTTGCCAAAGCCTaGGAACTTGCTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKDLAKA*ELALPF
Trigger: AAAAGGAAGAGCAAGTTCTCAGGCTTTGGCAAGATC...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTTGGACTGGACTAGATaGTCTGGCATTCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: RISFHSSLLLQGQEFRFNLDWTR*SGIPYG
Trigger: CCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAA...GTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTGCCACCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KNSGSTLVHWVCGSTSLPPSLAS*EEDKGL
Trigger: AAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGG...TGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGACTAGATCTGAATGGGACCTTCTaGATCAGAGTCGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FLRLANLTGSSSTWTGLDLNGTF*IRVALL
Trigger: AAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAG...ATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTTCTTCATCTCGGTACTaGATGGGACCTTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTSSSRY*MGPSES
Trigger: TGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGA...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAATGGATTGGTCAGACTaGACATGCTCACAAATAGCC +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRAMDWSD*TCSQIA
Trigger: GGCTATTTGTGAGCATGTTCAGTCTGACCAATCCAT...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR GCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCTGTACCACTGTTTATTaGTTGGGACAGTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVCTTVY*LGQFSN
Trigger: ATTGCTGAACTGTCCCAAGCAATAAACAGTGGTACA...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGTGTTTCCAATCTGGTaGCGTATTTCATTCCACTCC +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLVFPIW*RISFHS
Trigger: GGAGTGGAATGAAATACGGCACCAGATTGGAAACAC...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSNFSFF*LTISFI
Trigger: AATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATT...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTATGCAATTCTGGCTGTaGTGGGAAGTGCTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFMQFWL*WEVLKF
Trigger: GAACTTTAGCACTTCCCAGCACAGCCAGAATTGCAT...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGATGCTACATTCAAAGTaGTGTCCACCTCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMMLHSK*CPPQKI
Trigger: GATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCCAGCATGCTACATTCAAAGTaGTGTCCACCTCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: SGTFSISIVMGRDLVRPSMLHSK*CPPQKI
Trigger: GATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT...GCTGGGTCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAATGCTACATTCAAAGTaGTGTCCACCTCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSMLHSK*CPPQKI
Trigger: GATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCATCAAGAGGACTGTATTaGTGTGTTACGAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAASRGLY*CVTRGT
Trigger: TGTACCTCTCGTAACACAGCAATACAGTCCTCTTGA...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTTCAAGAGGACTGTATTaGTGTGTTACGAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTSRGLY*CVTRGT
Trigger: TGTACCTCTCGTAACACAGCAATACAGTCCTCTTGA...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGCTGACAGCTCATAAATaGTCCCACAGAGTTGATACA +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRLTAHK*SHRVDT
Trigger: TGTATCAACTCTGTGGGAGCATTTATGAGCTGTCAG...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR GCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCGGGATTACAGATGCGTaGCACCACGCCAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: ASKGKTPQACYNIERFKSGITDA*HHARLI
Trigger: AATTAGCCTGGCGTGGTGGCACGCATCTGTAATCCC...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCAGAAGTAAAGGTGGTTTaGGTACATTCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: AGESPGVDLRMVETQFLAEVKVV*VHSQEQ
Trigger: CTGTTCCTGAGAATGTACCCAAACCACCTTTACTTC...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCACATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRAHMSEA*GSSSVS
Trigger: ACTAACACTACTGCTACCCCAAGCCTCACTCATATG...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAACATATGAGTGAGGCTTaGGGTAGCAGTAGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQHMSEA*GSSSVS
Trigger: ACTAACACTACTGCTACCCCAAGCCTCACTCATATG...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCATCTCGGTACTGAATaGGACCTTCTGAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGHLGTE*DLLNQS
Trigger: ACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTGGAGAAGGAAGCAGCAAAGCAGCCATGTTGATTCCTCTCTCAACCTTTGGCAGTGTGTTTCCAATCTaGTGCCGTATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: FGEGSSKAAMLIPLSTFGSVFPI*CRISFH
Trigger: GTGGAATGAAATACGGCACCAGATTGGAAACACACT...GCCAAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCTGCTTCCTTCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGCTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWLHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGCTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLLHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTCTTTTATCAGAAGGTTaGGGGTCTCCAGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGLLSEG*GSPEGF
Trigger: AAAACCTTCTGGAGACCCCCAACCTTCTGATAAAAG...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACAGGAATTTGGATTCTGGTTaGAGTTCAGGAAAAACTAAG +
Preference number: 4 (lower is better)
Translates to: TIRAGQVRLMVQTVSLHRNLDSG*SSGKTK
Trigger: CTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATT...CCTGTGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAGGGCAGAACCAATTTGGATTCTaGTTGGAGTTCAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DGWNLEPTHLGLTIRAGQNQFGF*LEFRKN
Trigger: GTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTT...CTGCCCTGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTAACTTCAAGGAGATGTaGATTCAGGGCTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSNFKEM*IQGLLS
Trigger: GGAAAGCAAGCCCTGAATCCACATCTCCTTGAAGTT...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR TCA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCATCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTA +
Preference number: 4 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAASRFSA*RSASFL
Trigger: TAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGA...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAAAGACTCTGTTCCAGTaGAATGCTACATTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSKTLFQ*NATFKV
Trigger: CACTTTGAATGTAGCATTTCACTGGAACAGAGTCTT...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTAAGGTTCAAAAGCACTaGCAAAGTGTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGKVQKH*QSVVLP
Trigger: GGGCAAAACAACACTTTGTCAGTGCTTTTGAACCTT...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTAAGGTTCAAAAGCACTaGCAAAGTGTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GQEFRFNSGSLGLWFNFIKVQKH*QSVVLP
Trigger: GGGCAAAACAACACTTTGTCAGTGCTTTTGAACCTT...AATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGTGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILCNAFI*YASVVR
Trigger: TCTTACCACACTGGCATATCAGATGAAAGCATTGCA...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTAAATCATGATGACTTGTaGGGAAAAGGAAGAACATGT +
Preference number: 4 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVNHDDL*GKGRTC
Trigger: ACATGTTCTTCCTTTTCCTCACAAGTCATCATGATT...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp CGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACCTCAGGAACAGACTCTaGTTCAGAATTAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RISFHSSLLLQGQEFRFNLRNRL*FRIRLA
Trigger: AGCCAGCCTAATTCTGAAGCAGAGTCTGTTCCTGAG...GTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGTGTACCACTGTTTATTaGTTGGGACAGTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRCTTVY*LGQFSN
Trigger: ATTGCTGAACTGTCCCAAGCAATAAACAGTGGTACA...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTCATTCCACTCCTCCTTaGTTTTACAAGGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFHSTPP*FYKAKN
Trigger: ATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATG...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGTGCTTTCATCTGATATaGCAGTGTGGTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWCFHLI*QCGKKA
Trigger: AGCCTTCTTACCACACTGGCATATCAGATGAAAGCA...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTTCAAGAGGACTGTATTaGTGTGTTACGAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGSRGLY*CVTRGT
Trigger: TGTACCTCTCGTAACACAGCAATACAGTCCTCTTGA...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAAATGATGACTCACACCTaGTATCTCAGAACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKMMTHT*YLRTLG
Trigger: TCCCAAAGTTCTGAGATAGCAGGTGTGAGTCATCAT...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTTGCCGCCAGAGGAAGTaGCATCCTTTGCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLCRQRK*HPLLAL
Trigger: AAGGGCAAGCAAAGGATGCCACTTCCTCTGGCGGCA...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTCCACTGTTTATTGCTTaGGACAGTTCAGCAATGACA +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFPLFIA*DSSAMT
Trigger: TGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGG...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCTCTTCTGGAATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTTGCTGGGGAATCTCCTaGTGTAGATCTAAGGATGGT +
Preference number: 4 (lower is better)
Translates to: SSSGIAFLRLANLTGSSSCWGIS*CRSKDG
Trigger: ACCATCCTTAGATCTACACCAGGAGATTCCCCAGCA...AGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTATTCCAGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCCATAGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATTTCACTGAATGTGGATaGACAGGTTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AHRTRALLSFITWCFCGDFTECG*TGLLLF
Trigger: GAAGAGGAGCAAACCTGTCCATCCACATTCAGTGAA...ATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTCAGCAGGGGTCAGTTTaGTCCAAGGTTTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTQQGSV*SKVCRL
Trigger: GAGCCGACAAACCTTGGACCAAACTGACCCCTGCTG...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTTAATTCTTTTCTTATaGCAGCCTTGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLLILFL*QPCQQG
Trigger: CCCCTGCTGACAAGGCTGCCATAAGAAAAGAATTAA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAAGTGGTTCAGAACTTTaGTGGCCAGTAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRASGSEL*WPVREK
Trigger: TTTTTCCCTTACTGGCCACCAAAGTTCTGAACCACT...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCGCAGCCAGTAAAACCTaGAACCTGCAAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ASKGKTPQACYNIERFKSAASKT*NLQVVQ
Trigger: CTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGC...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTTTTATCAGAAGGTTaGGGGTCTCCAGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGLLSEG*GSPEGF
Trigger: AAAACCTTCTGGAGACCCCCAACCTTCTGATAAAAG...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCAACCAATTTGGATTCTaGTTGGAGTTCAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GKKAFPGGRDSFIRRLGVNQFGF*LEFRKN
Trigger: GTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTT...GACCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTAGAAGAGGGGAGCAGTaGGCCATGATTGTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTRRGEQ*AMIVPF
Trigger: GAAGGGCACAATCATGGCCCACTGCTCCCCTCTTCT...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp GGTGAGATCATTGGTAGTAGTTCCGAGCCCATAGAACACGTGCTCTTCTCTCTTTCTGGAGAAGTCAAATaGATCTTCCATGCCACTATT +
Preference number: 4 (lower is better)
Translates to: GEIIGSSSEPIEHVLFSLSGEVK*IFHATI
Trigger: AATAGTGGCATGGAAGATCCATTTGACTTCTCCAGA...AAGAGAGAAGAGCACGTGTTCTATGGGCTCGGAACTACTACCAATGATCTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR CAA 72 bp GTTGCAATATATTGCGTTGTTCTAGTTCTTCTGGTGTaGGTCTTTGACTCAGTCGCCGGATCAGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VAIYCVVLVLLV*VFDSVAGSVCF
Trigger: GAAACACACTGATCCGGCGACTGAGTCAAAGACCAACACCAGAAGAACTAGAACAACGCAATATATTGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTCATCAGCTTGTCCCATaGTTATATTGTCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGHQLVP*LYCLMY
Trigger: ATACATCAGACAATATAATCATGGGACAAGCTGATG...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR TCA 90 bp TCCTCCTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTATTTCTGGCACAACTTaGAAAGTCTTAGCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SSLLLQGQEFRFNSGSLGISGTT*KVLAGN
Trigger: ATTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAAT...ACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGTCTCGTTTTTCTGCCTaGCGATCAGCTTCATTTTTA +
Preference number: 4 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWSRFSA*RSASFL
Trigger: TAAAAATGAAGCTGATCGTCAGGCAGAAAAACGAGA...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTAGGTGTTGTGTCTCCTaGTTCCACACTGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLRCCVS*FHTVQD
Trigger: GTCCTGGACAGTGTGGAAGCAGGAGACACAACACCT...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp TTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGACTAGATTGCTTGCCCTTCACTTaGTTCATGAGAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: FLRLANLTGSSSTWTGLDCLPFT*FMRRGQ
Trigger: TTGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCA...ATCTAGTCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTTCCGACCCAGCGTACTaGTGTCCTCAGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTSDPAY*CPQKSC
Trigger: ACAGCTTTTCTGAGGACAGCAGTACGCTGGGTCGGA...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GCCCATAGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATCATTCCACTCCTCCTTaGTTTTACAAGGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: AHRTRALLSFITWCFCGDHSTPP*FYKAKN
Trigger: ATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATG...ATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCTATGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp TCATCGTCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGAGTAAAACCTGGAACCTaGAAGTGGTTCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: SSSGTFSISIVMGRDLVRVKPGT*KWFRTL
Trigger: CAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC...TCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTAACCTGCTAGTTTTCTaGCACGTTAGCATTAATATT +
Preference number: 4 (lower is better)
Translates to: KNMSDPELPLRLECLKRTNLLVF*HVSINI
Trigger: AATATTAATGCTAACGTGGCAGAAAACTAGCAGGTT...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTCATCTCGGTACTGAATaGGACCTTCTGAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSHLGTE*DLLNQS
Trigger: ACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTCTCCATATGTCACTTTaGAGAAGGAAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSLHMSL*RRKQQS
Trigger: GCTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAG...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTCCTGGAACCTGCAAGTaGTTCAGAACTTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCPGTCK*FRTLVA
Trigger: GGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGG...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILAIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTAACCAATTTGGATTCTaGTTGGAGTTCAGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILANQFGF*LEFRKN
Trigger: GTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTT...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTGTTCCAAGGTTCTCTaGAGAAGTCAAATGGATCTT +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSCSKVL*RSQMDL
Trigger: AAGATCCATTTGACTTCTCCAGAGAACCTTGGAACA...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493669.2
3UTR CAA 72 bp TTTCCAATCTGGTGCCGTATTTCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: FPIWCRISFHSS*LLQGQEFRFNS
Trigger: AGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAGATTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
3UTR CAA 72 bp TTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATAATCTaGAGCATCTGTTACCTCTACATATTCATTAAACCT +
Preference number: 4 (lower is better)
Translates to: FGPRFVGSPVII*SICYLYIFIKP
Trigger: AGGTTTAATGAATATGTAGAGGTAACAGATGCTCAAGATTATGACCGGCGAGCCGACAAACCTTGGACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTTGGACTGGACTAGATaGTCTGGCATTCCCTATGGG +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCLDWTR*SGIPYG
Trigger: CCCATAGGGAATGCCAGATCATCTAGTCCAGTCCAA...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTTTGGTGTTTTTGTGGTaGTGGCAGCAGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLLVFLW*WQQQTP
Trigger: TGGAGTCTGCTGCTGCCATCACCACAAAAACACCAA...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTAATCATGATGACTTGTaGGGAAAAGGAAGAACATGT +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSNHDDL*GKGRTC
Trigger: ACATGTTCTTCCTTTTCCTCACAAGTCATCATGATT...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAAAATCATGATGACTTGTaGGGAAAAGGAAGAACATGT +
Preference number: 4 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKNHDDL*GKGRTC
Trigger: ACATGTTCTTCCTTTTCCTCACAAGTCATCATGATT...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR GCA 90 bp ACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTGGTCTGCTTCCTCAACTaGATCTGGATTTACCGGTCT +
Preference number: 4 (lower is better)
Translates to: TPQACYNIERFKSTDKVLVCFLN*IWIYRS
Trigger: AGACCGGTAAATCCAGATGCAGTTGAGGAAGCAGAC...CAACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR GCA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSNFSFF*LTISFI
Trigger: AATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATT...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTNFSFF*LTISFI
Trigger: AATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATT...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTTGCTTTTACAAGGCCAAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGAATTTCTCGTTTTTCTaGCTGACGATCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: LAFTRPRIQVQLWFTGSVNFSFF*LTISFI
Trigger: AATGAAGCTGATCGTCAGGCAGAAAAACGAGAAATT...CACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTTGGCCTTGTAAAAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp GATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGAGTTGATACAACTCTaGTTTAAGGAGGAGAATACA +
Preference number: 4 (lower is better)
Translates to: DAILAVLGSAKVPSICHFELIQL*FKEENT
Trigger: TGTATTCTCCTCCTTAAAGCAGAGTTGTATCAACTC...AAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTATCTGGCATTCCCTATaGGGGTGGTATGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTIWHSL*GWYGHS
Trigger: AGAATGGCCATACCACCCCCATAGGGAATGCCAGAT...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTGGGTTCACTGGGTCTGTaGTTCAACTTCATTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TPQACYNIERFKSTDKVLGSLGL*FNFIAS
Trigger: ACTGGCAATGAAGTTGAACCACAGACCCAGTGAACC...CAACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTAATTTGGATTCTGGTTaGAGTTCAGGAAAAACTAAG +
Preference number: 4 (lower is better)
Translates to: LHSKCCPPQKIPEDAILANLDSG*SSGKTK
Trigger: CTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATT...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTCCTTCACTTGCTTCATaGGAAGAGGACAAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLPSLAS*EEDKGL
Trigger: AAGACCCTTGTCCTCTTCTCATGAAGCAAGTGAAGG...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR TCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCTGCAATGCTTTCATCTaGTATGCCAGTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ASKGKTPQACYNIERFKSCNAFI*YASVVR
Trigger: TCTTACCACACTGGCATATCAGATGAAAGCATTGCA...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTTGTACCACTGTTTATTaGTTGGGACAGTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSCTTVY*LGQFSN
Trigger: ATTGCTGAACTGTCCCAAGCAATAAACAGTGGTACA...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCCCACTGTTTATTGCTTaGGACAGTTCAGCAATGACA +
Preference number: 4 (lower is better)
Translates to: ASKGKTPQACYNIERFKSPLFIA*DSSAMT
Trigger: TGTCATTGCTGAACTGTCCCAAGCAATAAACAGTGG...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTTCCTCTTCACTTTGTTaGCGAGAGCACTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLSSSLC*REHSDS
Trigger: GCTATCAGAGTGCTCTCGCCAACAAAGTGAAGAGGA...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTCAATTCTGGCTGTGCTaGGAAGTGCTAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCQFWLC*EVLKFP
Trigger: AGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTG...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTCTTCATCTCGGTACTaGATGGGACCTTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCSSSRY*MGPSES
Trigger: TGATTCAGAAGGTCCCATTCAGTACCGAGATGAAGA...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR TCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTACCAGTTTAGGGAGGTaGGATACTGTTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCTSLGR*DTVSRS
Trigger: AGATCTGGAAACAGTATCTCACCTCCCTAAACTGGT...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTGAGATTAACAGTCTTTaGAAGGCTTGTGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCEINSL*KACGSS
Trigger: ACTGCTGCCACAAGCCTTGCAAAGACTGTTAATCTC...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp AAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTGCCAAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KNSGSTLVHWVCGSTSLPKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...TGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTAGGACAAGGGTCTTTTaGGAGGAAGTAAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLRTRVF*EEVKVV
Trigger: AACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCT...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTCATCTCGGTACTGAATaGGACCTTCTGAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLHLGTE*DLLNQS
Trigger: ACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGGTTCAGAACTTTGGTaGCCAGTAAGGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTGSELW*PVREKL
Trigger: GAGTTTTTCCCTTACTGGCCACCAAAGTTCTGAACC...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp ACTGTTTTCAAAAAGCAACGAATGAGCTCTGTGAGAACCCTCCAGAATAGGAGTATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 4 (lower is better)
Translates to: TVFKKQRMSSVRTLQNRSIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...ACTCCTATTCTGGAGGGTTCTCACAGAGCTCATTCGTTGCTTTTTGAAAACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTTTCTGGCTAGAAGTGTaGGGACTGACAGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTFWLEV*GLTAHK
Trigger: TTTATGAGCTGTCAGTCCCCACACTTCTAGCCAGAA...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTGAAGTAAAGGTGGTTTaGGTACATTCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCEVKVV*VHSQEQ
Trigger: CTGTTCCTGAGAATGTACCCAAACCACCTTTACTTC...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTAGTGTGTTTCCAATCTaGTGCCGTATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: KLLKHATILKGSKALTKCSVFPI*CRISFH
Trigger: GTGGAATGAAATACGGCACCAGATTGGAAACACACT...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CCA 90 bp GCCAGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCATTGGATTTGATGGCTaGAATTTAGAGCCTACACAT +
Preference number: 4 (lower is better)
Translates to: ASKGKTPQACYNIERFKSIGFDG*NLEPTH
Trigger: ATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAAT...GCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR GCA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTAAAACTCCTCAAGCATaGTACAATATTGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLKTPQA*YNIERF
Trigger: GAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTT...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CCA 90 bp AGTAAGGGAAAAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTAATTTGGATTCTGGTTaGAGTTCAGGAAAAACTAAG +
Preference number: 4 (lower is better)
Translates to: SKGKTPQACYNIERFKSTNLDSG*SSGKTK
Trigger: CTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATT...AGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTTTTCCCTTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCATCCTACCTGGCCCGTaGGCCGCCAGGCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: CQILSFLSGLSASRGLYCILPGP*AARQQP
Trigger: CGGCTGCTGCCTGGCGGCCAACGGGCCAGGTAGGAT...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GGAGGTGGAGATGATGAACCTTGCCGTGCCGCCAGAGGAAGTGGCATCCTTTGCGAGGCCAAGCGGGGGTaGCTTGAGTCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: GGGDDEPCRAARGSGILCEAKRG*LESRSS
Trigger: TGAACTCCTGGACTCAAGCAACCCCCGCTTGGCCTC...GCAAAGGATGCCACTTCCTCTGGCGGCACGGCAAGGTTCATCATCTCCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS CCA 90 bp AGGAGGTGTTGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCTTAGGTCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RRCCVSCFHTVQDHA*LCSGLVCFLLGQVQ
Trigger: CTGCACCTGACCTAAGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAAATCCTACCTGGCCCGTaGGCCGCCAGGCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQILPGP*AARQQP
Trigger: CGGCTGCTGCCTGGCGGCCAACGGGCCAGGTAGGAT...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS CCA 90 bp AGGAGGTGTTGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCAACTGCATCTGGATT +
Preference number: 5 (lower is better)
Translates to: RRCCVSCFHTVQDHA*LCSGLVCFLNCIWI
Trigger: AATCCAGATGCAGTTGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS CCA 90 bp AGGAGGTGTTGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCTACTGTTCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: RRCCVSCFHTVQDHA*LCSGLVCFLYCSKV
Trigger: AACCTTGGAACAGTAGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000633371.1
CDS CCA 90 bp AGGAGGTGTTGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCAAATGGATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RRCCVSCFHTVQDHA*LCSGLVCFLKWIFH
Trigger: ATGGAAGATCCATTTGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACAACACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000463428.5
CDS-3UTR CAA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTTGGATCCTCACCACCTaGCTCAGGGTCTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: GSHNQGRAGKANGANCVSWILTT*LRVFQQ
Trigger: CTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCCA...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGTATCCTCTTTGGATCCTCACCACCTaGCTCAGGGTCTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: RQPRGYMGLPKVLVQYPLWILTT*LRVFQQ
Trigger: CTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCCA...AAGAGGATACTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTAGGAAGTGGCATCCTTaGCTTGCCCTTCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGRKWHP*LALHLL
Trigger: AAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCCT...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGCCTTGTCAGCAGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATATCGCCGGTCATAATCTaGAGCATCTGTTACCTCTAC +
Preference number: 5 (lower is better)
Translates to: SLVSRGQFGPRFVGSPVISPVII*SICYLY
Trigger: GTAGAGGTAACAGATGCTCAAGATTATGACCGGCGA...TATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTCAGCAGGGGTCAGTTaGGTCCAAGGTTTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: RTCQILSFLSGLSASRGLSAGVS*VQGLSA
Trigger: AGCCGACAAACCTTGGACCAAACTGACCCCTGCTGA...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp TGGGAGTGGAGGCAGCCTAGAGGGTATATGGGGCTCCCCAAAGTTCTGGTCCAGAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 5 (lower is better)
Translates to: WEWRQPRGYMGLPKVLVQSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...CTGGACCAGAACTTTGGGGAGCCCCATATACCCTCTAGGCTGCCTCCACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RTCQILSFLSGLSASRGLSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp AGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGAGATGGGCAGATTCCTaGAGCCCCGGTGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: RTCQILSFLSGLSASRGLRWADS*SPGVQD
Trigger: GTCTTGAACACCGGGGCTCAAGGAATCTGCCCATCT...CAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CAA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTTCTAATCCCAGCACTTaGGGAGGCCAAGCGGGGGTT +
Preference number: 5 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTSNPST*GGQAGV
Trigger: AACCCCCGCTTGGCCTCCCAAAGTGCTGGGATTAGA...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR CAA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCTGGATCCTCACCACCTaGCTCAGGGTCTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSWILTT*LRVFQQ
Trigger: CTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCCA...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCAGCGAGGTGAGATCATaGGTAGTAGTTCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: CQILSFLSGLSASRGLYCSEVRS*VVVPSP
Trigger: TGGGCTCGGAACTACTACCAATGATCTCACCTCGCT...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTAGCGACAGTTGGCCTTaGACTGAGCTTTCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTSDSWP*TELSSE
Trigger: CTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGCT...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGGGTACTGAGGTTGATGGAATGCCTCTCTTAGGTGGTAAGGGTGGGGACGGTTTCCTCTCTCAACCTTaGGCATCATGGACGATGGTA +
Preference number: 5 (lower is better)
Translates to: VGTEVDGMPLLGGKGGDGFLSQP*ASWTMV
Trigger: TACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAA...ACCGTCCCCACCCTTACCACCTAAGAGAGGCATTCCATCAACCTCAGTACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PEDAILAVLGSAKVPSICSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGCAGTAGGCATGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: TFGSHNQGRAGKANGANCAVGMI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCATGCCTACTGC...ACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTCAGGGCTTGAAGATCTaGCCAAAGCCTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASQGLKI*PKPENL
Trigger: CAAGTTCTCAGGCTTTGGCAAGATCTTCAAGCCCTG...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCATGGATCCTCACCACCTaGCTCAGGGTCTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSWILTT*LRVFQQ
Trigger: CTGTTGGAAGACCCTGAGCAAGGTGGTGAGGATCCA...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ATCCTCACCACCTTGCTCAGGGTCTTCCAACAGAACCCCTCTTTTAACCAGCTCTTAACATGGCATCGCTaGGCTTTCCTGGATCCTCAC +
Preference number: 5 (lower is better)
Translates to: ILTTLLRVFQQNPSFNQLLTWHR*AFLDPH
Trigger: GTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAA...GAGCTGGTTAAAAGAGGGGTTCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCGAGGACAAGGGTCTTTaGGGAGGAAGTAAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: CQILSFLSGLSASRGLYCEDKGL*GGSKGG
Trigger: ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GGTGCTGGGGAAGGGGTGACAGAGAGATTAACAGTCTTTGCAAGGCTTGTGGCAAGGGTGGGGACGGTTTaGATAACAATGTACCACTGT +
Preference number: 5 (lower is better)
Translates to: GAGEGVTERLTVFARLVARVGTV*ITMYHC
Trigger: ACAGTGGTACATTGTTATCAAAACCGTCCCCACCCT...TGCCACAAGCCTTGCAAAGACTGTTAATCTCTCTGTCACCCCTTCCCCAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCAAGCGATTCTCATGCCTCAACCAGGCGCCACCACACCTGGCTAATTTTTGTAAGCGAGGTGAGATCATaGGTAGTAGTTCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SSDSHASTRRHHTWLIFVSEVRS*VVVPSP
Trigger: TGGGCTCGGAACTACTACCAATGATCTCACCTCGCT...TACAAAAATTAGCCAGGTGTGGTGGCGCCTGGTTGAGGCATGAGAATCGCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCTTCTGGTGTTGGTCTTaGACTCAGTCGCCGGATCAG +
Preference number: 5 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSFWCWS*TQSPDQ
Trigger: CTGATCCGGCGACTGAGTCAAAGACCAACACCAGAA...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTGTATTGCCTAGTTCTTCTGGTGTaGGTCTTTGACTCAGTCGCC +
Preference number: 5 (lower is better)
Translates to: CQILSFLSGLSASRGLYCLVLLV*VFDSVA
Trigger: GGCGACTGAGTCAAAGACCAACACCAGAAGAACTAG...GCAATACAGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp ATCCTCACCACCTTGCTCAGGGTCTTCCAACAGAACCCCTCTTTTAACCAGCTCAGCGACAGTTGGCCTTaGACTGAGCTTTCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: ILTTLLRVFQQNPSFNQLSDSWP*TELSSE
Trigger: CTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGCT...GAGCTGGTTAAAAGAGGGGTTCTGTTGGAAGACCCTGAGCAAGGTGGTGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTCCTCCATATGTCACTTaGGAGAAGGAAGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GSHNQGRAGKANGANCVSPPYVT*EKEAAK
Trigger: CTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGG...AGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CATCTCGGTACTGAATGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTGCAGTAGGCATGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: HLGTEWDLLNQSRSPSLLAVGMI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCATGCCTACTGC...AAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCATTCAGTACCGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR CAA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCCAAGCGGGGGTTGCTaGAGTCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGPSGGC*SPGVQD
Trigger: GTCTTGAACTCCTGGACTCAAGCAACCCCCGCTTGG...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS-3UTR CAA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCAGGGCTTGAAGATCTaGCCAAAGCCTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: PEDAILAVLGSAKVPSICQGLKI*PKPENL
Trigger: CAAGTTCTCAGGCTTTGGCAAGATCTTCAAGCCCTG...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTAGCGAGGTGAGATCATaGGTAGTAGTTCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGSEVRS*VVVPSP
Trigger: TGGGCTCGGAACTACTACCAATGATCTCACCTCGCT...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGCCTTGTCAGCAGGGGTCAGTTTGGTCCAAGGTTTGTCGGCTCGCCGGTCATAAATTTCTGGCACAACTaGAAAAGTCTTAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SLVSRGQFGPRFVGSPVINFWHN*KSLSRE
Trigger: TTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATT...TATGACCGGCGAGCCGACAAACCTTGGACCAAACTGACCCCTGCTGACAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATCAGCAGGGGTCAGTTaGGTCCAAGGTTTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQSAGVS*VQGLSA
Trigger: AGCCGACAAACCTTGGACCAAACTGACCCCTGCTGA...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTTCAGCAGGGGTCAGTTaGGTCCAAGGTTTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTSAGVS*VQGLSA
Trigger: AGCCGACAAACCTTGGACCAAACTGACCCCTGCTGA...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTTTTCTTATGGCAGCCTaGTCAGCAGGGGTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PEDAILAVLGSAKVPSICFLMAA*SAGVSL
Trigger: CAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAA...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTTTTCTTATGGCAGCCTaGTCAGCAGGGGTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: TFGSHNQGRAGKANGANCFLMAA*SAGVSL
Trigger: CAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAA...ACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GGAAGGGGTGTGGTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 5 (lower is better)
Translates to: GRGVVQPVKPGTCKWFRTSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...AGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCACCACACCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTCTGCACCTCCATATGTCACTTaGGAGAAGGAAGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SHNQGRAGKANGANCVSAPPYVT*EKEAAK
Trigger: CTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGG...TGCAGAGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTAAACTCCTGACCGCCTaGGCTTCCCAAAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGKLLTA*ASQSAE
Trigger: CTCAGCACTTTGGGAAGCCAAGGCGGTCAGGAGTTT...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS-3UTR CAA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAACTTGCTCTTCCTTTaGGTAGGAGGTGTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASNLLFL*VGGVVS
Trigger: AGACACAACACCTCCTACCAAAAGGAAGAGCAAGTT...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTCAGGGCTTGAAGATCTaGCCAAAGCCTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTQGLKI*PKPENL
Trigger: CAAGTTCTCAGGCTTTGGCAAGATCTTCAAGCCCTG...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTGAGGACAAGGGTCTTTaGGGAGGAAGTAAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGEDKGL*GGSKGG
Trigger: ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAGAGGACAAGGGTCTTTaGGGAGGAAGTAAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAAEDKGL*GGSKGG
Trigger: ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ACACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTTTGCTTGCCCTTCACTaGCTTCATGAGAAGAGGACA +
Preference number: 5 (lower is better)
Translates to: THLGLTIRAGQVRLMVQTLLALH*LHEKRT
Trigger: TGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAA...AGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAGGAAGTGGCATCCTTaGCTTGCCCTTCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTRKWHP*LALHLL
Trigger: AAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCCT...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAAAGCGAGGTGAGATCATaGGTAGTAGTTCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQSEVRS*VVVPSP
Trigger: TGGGCTCGGAACTACTACCAATGATCTCACCTCGCT...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTTGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSCGSTS*PVCLSS
Trigger: AGAGGAAAGACACACTGGCAATGAAGTTGAACCACA...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCGTAGACACTTGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: WDLLNQSRSPSLLPPVDTCGSTS*PVCLSS
Trigger: AGAGGAAAGACACACTGGCAATGAAGTTGAACCACA...AGTGTCTACGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGTTCTGGTGTTGGTCTTaGACTCAGTCGCCGGATCAG +
Preference number: 5 (lower is better)
Translates to: MLHSKCCPPQKIPEDAILFWCWS*TQSPDQ
Trigger: CTGATCCGGCGACTGAGTCAAAGACCAACACCAGAA...CAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTTCTGGTGTTGGTCTTaGACTCAGTCGCCGGATCAG +
Preference number: 5 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLFWCWS*TQSPDQ
Trigger: CTGATCCGGCGACTGAGTCAAAGACCAACACCAGAA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGCTAGTTCTTCTGGTGTaGGTCTTTGACTCAGTCGCC +
Preference number: 5 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRLVLLV*VFDSVA
Trigger: GGCGACTGAGTCAAAGACCAACACCAGAAGAACTAG...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CACCGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAATCGCCGGTCATAATCTaGAGCATCTGTTACCTCTAC +
Preference number: 5 (lower is better)
Translates to: HRAWPHLTNLDSGWSSGKSPVII*SICYLY
Trigger: GTAGAGGTAACAGATGCTCAAGATTATGACCGGCGA...TTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGTTTCTTATGGCAGCCTaGTCAGCAGGGGTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMFLMAA*SAGVSL
Trigger: CAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAA...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCATTTCTTATGGCAGCCTaGTCAGCAGGGGTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CWEVLKFPPYVTLEKEAAFLMAA*SAGVSL
Trigger: CAAACTGACCCCTGCTGACAAGGCTGCCATAAGAAA...TGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTGTCTAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: LGLTIRAGQVRLMVQTVSKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...AGACACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGCAGCCAGTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTTCTGGAGACATCAGCTaGTCCCATGATTATATTGTC +
Preference number: 5 (lower is better)
Translates to: VQPVKPGTCKWFRTLVASSGDIS*SHDYIV
Trigger: GACAATATAATCATGGGACAAGCTGATGTCTCCAGA...ACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTACTGGCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS-3UTR CAA 90 bp AGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGGCAGCCAGGGCTTGAAGATCTaGCCAAAGCCTGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: RTRALLSFITWCFCGDGSQGLKI*PKPENL
Trigger: CAAGTTCTCAGGCTTTGGCAAGATCTTCAAGCCCTG...GCTGCCATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAATTAACATGGCATCGCTaGGCTTTCCTGGATCCTCAC +
Preference number: 5 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKLTWHR*AFLDPH
Trigger: GTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAA...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGTTAACATGGCATCGCTaGGCTTTCCTGGATCCTCAC +
Preference number: 5 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWLTWHR*AFLDPH
Trigger: GTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAA...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCATTAACATGGCATCGCTaGGCTTTCCTGGATCCTCAC +
Preference number: 5 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRALTWHR*AFLDPH
Trigger: GTGAGGATCCAGGAAAGCCAAGCGATGCCATGTTAA...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAAGAGGACAAGGGTCTTTaGGGAGGAAGTAAAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKEDKGL*GGSKGG
Trigger: ACCACCTTTACTTCCTCCCAAAAGACCCTTGTCCTC...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCATTGCTTGCCCTTCACTaGCTTCATGAGAAGAGGACA +
Preference number: 5 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSLLALH*LHEKRT
Trigger: TGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAA...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTTTGCTTGCCCTTCACTaGCTTCATGAGAAGAGGACA +
Preference number: 5 (lower is better)
Translates to: RAWPHLTNLDSGWSSGKTLLALH*LHEKRT
Trigger: TGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAA...AGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAAGGAAGTGGCATCCTTaGCTTGCCCTTCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRARKWHP*LALHLL
Trigger: AAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCCT...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGAGGAAGTGGCATCCTTaGCTTGCCCTTCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQRKWHP*LALHLL
Trigger: AAGCAAGTGAAGGGCAAGCAAAGGATGCCACTTCCT...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTTGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: KNMSDPELPLRLECLKRTCGSTS*PVCLSS
Trigger: AGAGGAAAGACACACTGGCAATGAAGTTGAACCACA...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGGGGTCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: VVRRLSLEVETLLSEGWGSFHSS*LLQGQE
Trigger: TTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGA...CCCCCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAACTAGTTCTTCTGGTGTaGGTCTTTGACTCAGTCGCC +
Preference number: 5 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQLVLLV*VFDSVA
Trigger: GGCGACTGAGTCAAAGACCAACACCAGAAGAACTAG...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAAAGCGACAGTTGGCCTTaGACTGAGCTTTCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKSDSWP*TELSSE
Trigger: CTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGCT...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGAACACGTGCTCTTCTCTCTTTCATCACTTGGTGTTTTTGTGGTGATGGCAGCAGCGACAGTTGGCCTTaGACTGAGCTTTCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: RTRALLSFITWCFCGDGSSDSWP*TELSSE
Trigger: CTCACTAGAAAGCTCAGTCAAAGGCCAACTGTCGCT...GCTGCCATCACCACAAAAACACCAAGTGATGAAAGAGAGAAGAGCACGTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGATCAGCAGGGGTCAGTTaGGTCCAAGGTTTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: IAFLRLANLTGSSSTWTGSAGVS*VQGLSA
Trigger: AGCCGACAAACCTTGGACCAAACTGACCCCTGCTGA...TCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 5 (lower is better)
Translates to: PEDAILAVLGSAKVPSICSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp ACATTTGGGTCTCACAATCAGGGCAGGGCAGGTAAGGCTAATGGTGCAAACTGTAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: TFGSHNQGRAGKANGANCKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...ACAGTTTGCACCATTAGCCTTACCTGCCCTGCCCTGATTGTGAGACCCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRLEPTH*GLTIRA
Trigger: TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAA...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AAGAACATGTCAGATCCTGAGCTTCCTCTCAGGCTTGAGTGCCTCAAGAGGACTTCTTTTATCAGAAGGTaGGGGGTCTCCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: KNMSDPELPLRLECLKRTSFIRR*GVSRRF
Trigger: AAACCTTCTGGAGACCCCCAACCTTCTGATAAAAGA...AGTCCTCTTGAGGCACTCAAGCCTGAGAGGAAGCTCAGGATCTGACATGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCTCTTTTATCAGAAGGTaGGGGGTCTCCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: AVLGSAKVPSICHFGEGSSFIRR*GVSRRF
Trigger: AAACCTTCTGGAGACCCCCAACCTTCTGATAAAAGA...GCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAGCACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTCTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: ASVVRRLSLEVETLLSEGLKRTV*LCYERY
Trigger: GTACCTCTCGTAACACAGCAATACAGTCCTCTTGAG...ACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGAGAACAGGGGATGGATaGGTCAGACTGAACATGCTC +
Preference number: 5 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWRTGDG*VRLNML
Trigger: GAGCATGTTCAGTCTGACCAATCCATCCCCTGTTCT...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493669.2
CDS-3UTR CAA 90 bp CCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGAACTTGCTCTTCCTTTaGGTAGGAGGTGTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: PVKCYIQSAVHLRRSQRMNLLFL*VGGVVS
Trigger: AGACACAACACCTCCTACCAAAAGGAAGAGCAAGTT...CATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCATTGCTTGCCCTTCACTaGCTTCATGAGAAGAGGACA +
Preference number: 5 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRALLALH*LHEKRT
Trigger: TGTCCTCTTCTCATGAAGCAAGTGAAGGGCAAGCAA...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAAAGGGTGGGGACGGTTTaGATAACAATGTACCACTGT +
Preference number: 5 (lower is better)
Translates to: VKCYIQSAVHLRRSQRMQRVGTV*ITMYHC
Trigger: ACAGTGGTACATTGTTATCAAAACCGTCCCCACCCT...TTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCAAGGGTGGGGACGGTTTaGATAACAATGTACCACTGT +
Preference number: 5 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRARVGTV*ITMYHC
Trigger: ACAGTGGTACATTGTTATCAAAACCGTCCCCACCCT...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTGGTGCCGTATTTCATTCCACTCCTCCTTGCTTTTACAAGGCCAAGAATTCAGAGGGTGGGGACGGTTTaGATAACAATGTACCACTGT +
Preference number: 5 (lower is better)
Translates to: LVPYFIPLLLAFTRPRIQRVGTV*ITMYHC
Trigger: ACAGTGGTACATTGTTATCAAAACCGTCCCCACCCT...CTGAATTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGAAATACGGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TGGGACCTTCTGAATCAGAGTCGCTCTCCTTCTCTTCTTCCTCCCGTAGACACTAATTTCTGGCACAACTaGAAAAGTCTTAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: WDLLNQSRSPSLLPPVDTNFWHN*KSLSRE
Trigger: TTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATT...AGTGTCTACGGGAGGAAGAAGAGAAGGAGAGCGACTCTGATTCAGAAGGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGATGCAATTCTGGCTTGTGGTTCAACTTCATaGCCAGTGTGTCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LHSKCCPPQKIPEDAILACGSTS*PVCLSS
Trigger: AGAGGAAAGACACACTGGCAATGAAGTTGAACCACA...AGCCAGAATTGCATCCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AAGAATTCAGGTTCAACTCTGGTTCACTGGGTCTGTGGTTCAACTTCATTGCCACTAGTTCTTCTGGTGTaGGTCTTTGACTCAGTCGCC +
Preference number: 5 (lower is better)
Translates to: KNSGSTLVHWVCGSTSLPLVLLV*VFDSVA
Trigger: GGCGACTGAGTCAAAGACCAACACCAGAAGAACTAG...TGGCAATGAAGTTGAACCACAGACCCAGTGAACCAGAGTTGAACCTGAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TTTCATCTGATATGCCAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTCGCCGGTCATAATCTaGAGCATCTGTTACCTCTAC +
Preference number: 5 (lower is better)
Translates to: FHLICQCGKKAFPGGRDSSPVII*SICYLY
Trigger: GTAGAGGTAACAGATGCTCAAGATTATGACCGGCGA...AGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTGGCATATCAGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAATCGCCGGTCATAATCTaGAGCATCTGTTACCTCTAC +
Preference number: 5 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKSPVII*SICYLY
Trigger: GTAGAGGTAACAGATGCTCAAGATTATGACCGGCGA...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAATTCCTCTCTCAACCTTaGGCATCATGGACGATGGTA +
Preference number: 5 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKFLSQP*ASWTMV
Trigger: TACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAA...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGGTTCCTCTCTCAACCTTaGGCATCATGGACGATGGTA +
Preference number: 5 (lower is better)
Translates to: SVVRRLSLEVETLLSEGWFLSQP*ASWTMV
Trigger: TACCATCGTCCATGATGCCAAAGGTTGAGAGAGGAA...CCAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAAGCAAAGCAGCCATGTaGATTCCTCTCTCAACCTTT +
Preference number: 5 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSSKAAM*IPLSTF
Trigger: AAAGGTTGAGAGAGGAATCAACATGGCTGCTTTGCT...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLLEPTH*GLTIRA
Trigger: TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AGGGTCTTTTGGGAGGAAGTAAAGGTGGTTTGGGTACATTCTCAGGAACAGACTTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RVFWEEVKVVWVHSQEQTLEPTH*GLTIRA
Trigger: TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAA...AGTCTGTTCCTGAGAATGTACCCAAACCACCTTTACTTCCTCCCAAAAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCCAGCTTTCCCCACCAGGAATaGGATTTGATGGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SGTFSISIVMGRDLVRPSFPHQE*DLMAGI
Trigger: AATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAA...GCTGGGTCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GCTGGGGAATCTCCTGGTGTAGATCTAAGGATGGTGGAAACTCAATTTCTGGCATCTTTTATCAGAAGGTaGGGGGTCTCCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: AGESPGVDLRMVETQFLASFIRR*GVSRRF
Trigger: AAACCTTCTGGAGACCCCCAACCTTCTGATAAAAGA...TGCCAGAAATTGAGTTTCCACCATCCTTAGATCTACACCAGGAGATTCCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SPPGIGFDGWNLEPTHLGLKRTV*LCYERY
Trigger: GTACCTCTCGTAACACAGCAATACAGTCCTCTTGAG...ACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GGATTTGATGGCTGGAATTTAGAGCCTACACATTTGGGTCTCACAATCAGGGCACTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: GFDGWNLEPTHLGLTIRALKRTV*LCYERY
Trigger: GTACCTCTCGTAACACAGCAATACAGTCCTCTTGAG...TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAAATTCCAGCCATCAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CACCGCGCCTGGCCTCATCTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAACCTCATCTAACCAATTaGGATTCTGGTTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: HRAWPHLTNLDSGWSSGKPHLTN*DSGWSS
Trigger: TGAACTCCAACCAGAATCCAAATTGGTTAGATGAGG...TTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGGCCAGGCGCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTATGATTGTGCCCTTCTaGCTTCTCCAGAGACCCTTT +
Preference number: 5 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPMIVPF*LLQRPF
Trigger: AAAGGGTCTCTGGAGAAGCAAGAAGGGCACAATCAT...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS TCA 90 bp CAACTGCATCTGGATTTACCGGTCTGGAGACATCAGCTTGTCCCATaGTTATATTGTCTGATGTATCTCACGACAACAAACTGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: QLHLDLPVWRHQLVP*LYCLMYLTTTNCPG
Trigger: TCCGGGACAGTTTGTTGTCGTGAGATACATCAGACAATATAATCATGGGACAAGCTGATGTCTCCAGACCGGTAAATCCAGATGCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1
CDS-3UTR CAA 90 bp CCAGAGGATGCAATTCTGGCTGTGCTGGGAAGTGCTAAAGTTCCCTCCATATGTAATTTCTGGCACAACTaGAAAAGTCTTAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: PEDAILAVLGSAKVPSICNFWHN*KSLSRE
Trigger: TTCCCTGCTAAGACTTTTCAAGTTGTGCCAGAAATT...ACATATGGAGGGAACTTTAGCACTTCCCAGCACAGCCAGAATTGCATCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAATCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKSFHSS*LLQGQE
Trigger: TTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGA...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLSFHSS*LLQGQE
Trigger: TTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCATCGTCTGGAACTTTTAGCATTTCAATAGTGATGGGAAGAGACCTGGTCCGACCTCCATATGTCACTTaGGAGAAGGAAGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SSSGTFSISIVMGRDLVRPPYVT*EKEAAK
Trigger: CTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGG...TCGGACCAGGTCTCTTCCCATCACTATTGAAATGCTAAAAGTTCCAGACGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTAAAACCTGGAACCTGCAAGTGGTTCAGAACTTTGGTGGCCAGTAAGGGAAAAAAGTGGTTCAGAACTTaGGTGGCCAGTAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: VKPGTCKWFRTLVASKGKKWFRT*VASKGK
Trigger: TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTT...TTTTCCCTTACTGGCCACCAAAGTTCTGAACCACTTGCAGGTTCCAGGTTTTAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CAGTGTGGTAAGAAGGCTTTCCCTGGAGGTAGAGACTCTTTTATCAGAAGGTTGTTTCCCCACCAGGAATaGGATTTGATGGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: QCGKKAFPGGRDSFIRRLFPHQE*DLMAGI
Trigger: AATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAA...CAACCTTCTGATAAAAGAGTCTCTACCTCCAGGGAAAGCCTTCTTACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp CTGGGAAGTGCTAAAGTTCCCTCCATATGTCACTTTGGAGAAGGAAGCAGCAAATTTCCCCACCAGGAATaGGATTTGATGGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: LGSAKVPSICHFGEGSSKFPHQE*DLMAGI
Trigger: AATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAA...TTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGGGAACTTTAGCACTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp TCCAGAAGGTTTTCCCCACCAGGAATTGGATTTGATGGCTGGAATTTAGAGCCTTTTCCCCACCAGGAATaGGATTTGATGGCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SRRFSPPGIGFDGWNLEPFPHQE*DLMAGI
Trigger: AATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAA...AGGCTCTAAATTCCAGCCATCAAATCCAATTCCTGGTGGGGAAAACCTTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTCCAGTGAAATGCTACATTCAAAGTGCTGTCCACCTCAGAAGATCCCAGAGGCCTCATCTAACCAATTaGGATTCTGGTTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VPVKCYIQSAVHLRRSQRPHLTN*DSGWSS
Trigger: TGAACTCCAACCAGAATCCAAATTGGTTAGATGAGG...CCTCTGGGATCTTCTGAGGTGGACAGCACTTTGAATGTAGCATTTCACTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCACCTCATCTAACCAATTaGGATTCTGGTTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSPHLTN*DSGWSS
Trigger: TGAACTCCAACCAGAATCCAAATTGGTTAGATGAGG...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS TCA 90 bp CATAAGGTCAGTTCATCTGCTGAAGTTTCTGTTTCCCATACAGCCTaGGCACTTGCAGTTCTTACAAAACTGTCTTCACACTGGCACTCT +
Preference number: 5 (lower is better)
Translates to: HKVSSSAEVSVSHTA*ALAVLTKLSSHWHS
Trigger: AGAGTGCCAGTGTGAAGACAGTTTTGTAAGAACTGCAAGTGCTCAGGCTGTATGGGAAACAGAAACTTCAGCAGATGAACTGACCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633167.1
CDS-3UTR CAA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTAGCACTGACAAAGTGTaGTTTTGCCCCCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLSTDKV*FCPRCS
Trigger: GCTGCACCGGGGGCAAAACAACACTTTGTCAGTGCT...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp TCCTCTTCTGGAATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTCTCAAGAGGACTGTATaGCTGTGTTACGAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SSSGIAFLRLANLTGSSSLKRTV*LCYERY
Trigger: GTACCTCTCGTAACACAGCAATACAGTCCTCTTGAG...AGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTATTCCAGAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS CCA 90 bp GGAAGGCTCGGCACGGTGGCTCATCTAACCAATTTGGATTCTGGTTaGAGTTCAGGAAAAACTAAGTTCCCATTACTTCCAGATTATTTT +
Preference number: 5 (lower is better)
Translates to: GRLGTVAHLTNLDSG*SSGKTKFPLLPDYF
Trigger: AAAATAATCTGGAAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGCCACCGTGCCGAGCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632964.1
CDS-3UTR CAA 90 bp ATAGCTTTCCTAAGACTTGCTAATCTTACTGGCTCTTCCTCTACTTGGACTGGAAACTTGCTCTTCCTTTaGGTAGGAGGTGTTGTGTCT +
Preference number: 5 (lower is better)
Translates to: IAFLRLANLTGSSSTWTGNLLFL*VGGVVS
Trigger: AGACACAACACCTCCTACCAAAAGGAAGAGCAAGTT...TCCAGTCCAAGTAGAGGAAGAGCCAGTAAGATTAGCAAGTCTTAGGAAAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp GTTTTGCCCCCGGTGCAGCACATAAGACTCTGTTCCAGTGAAATGCTACATTCAAATAGCCACAACTTCTaGAACATTAAAGTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: VLPPVQHIRLCSSEMLHSNSHNF*NIKVKG
Trigger: TCCCTTCACTTTAATGTTCAAGAAGTTGTGGCTATT...TGAATGTAGCATTTCACTGGAACAGAGTCTTATGTGCTGCACCGGGGGCAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373839.8
CDS TCA 90 bp ATTTACCGGTCTGGAGACATCAGCTTGTCCCATGATTATATTGTCTaGTGTATCTCACGACAACAAACTGTCCCGGACAAAAGCAAACTT +
Preference number: 5 (lower is better)
Translates to: IYRSGDISLSHDYIV*CISRQQTVPDKSKL
Trigger: AAGTTTGCTTTTGTCCGGGACAGTTTGTTGTCGTGAGATACATCAGACAATATAATCATGGGACAAGCTGATGTCTCCAGACCGGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1
CDS-3UTR CAA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTCCTCCATATGTCACTTaGGAGAAGGAAGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLPPYVT*EKEAAK
Trigger: CTTTGCTGCTTCCTTCTCCAAAGTGACATATGGAGG...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp CTAACCAATTTGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTCCCATTACTTTTAGAGCCTACACATTaGGGTCTCACAATCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LTNLDSGWSSGKTKFPLLLEPTH*GLTIRA
Trigger: TGCCCTGATTGTGAGACCCAAATGTGTAGGCTCTAA...AAGTAATGGGAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000632421.1
CDS-3UTR CAA 90 bp ACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTGTCTTTTATCAGAAGGTaGGGGGTCTCCAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: TPQACYNIERFKSTDKVLSFIRR*GVSRRF
Trigger: AAACCTTCTGGAGACCCCCAACCTTCTGATAAAAGA...CAACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTCATTCCACTCCTCCTaGCTTTTACAAGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: KLLKHATILKGSKALTKCSFHSS*LLQGQE
Trigger: TTCTTGGCCTTGTAAAAGCAAGGAGGAGTGGAATGA...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373836.4
ENST00000373839.8
ENST00000493669.2
ENST00000632421.1
CDS-3UTR CAA 90 bp AAACTCCTCAAGCATGCTACAATATTGAAAGGTTCAAAAGCACTGACAAAGTGTTGTCCCATGATTATATaGTCTGATGTATCTCACGAC +
Preference number: 5 (lower is better)
Translates to: KLLKHATILKGSKALTKCCPMII*SDVSHD
Trigger: GTCGTGAGATACATCAGACAATATAATCATGGGACA...ACACTTTGTCAGTGCTTTTGAACCTTTCAATATTGTAGCATGCTTGAGGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS CCA 72 bp TGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCAACTGC +
Preference number: 6 (lower is better)
Translates to: CVSCFHTVQDHA*LCSGLVCFLNC
Trigger: GCAGTTGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373836.4
CDS CCA 72 bp TGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCAAATGG +
Preference number: 6 (lower is better)
Translates to: CVSCFHTVQDHA*LCSGLVCFLKW
Trigger: CCATTTGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373839.8
ENST00000463428.5
CDS CCA 72 bp TGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCTACTGT +
Preference number: 6 (lower is better)
Translates to: CVSCFHTVQDHA*LCSGLVCFLYC
Trigger: ACAGTAGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493669.2
ENST00000633371.1
CDS CCA 72 bp TGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: CVSCFHTVQDHA*LCSGLVCFLVP
Trigger: TGGAACAAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000632202.1
ENST00000633167.1
CDS CCA 72 bp TGTGTCTCCTGCTTCCACACTGTCCAGGACCATGCCTaGCTCTGTAGTGGGCTGGTCTGCTTCCTCTTAGGT +
Preference number: 6 (lower is better)
Translates to: CVSCFHTVQDHA*LCSGLVCFLLG
Trigger: ACCTAAGAGGAAGCAGACCAGCCCACTACAGAGCCAGGCATGGTCCTGGACAGTGTGGAAGCAGGAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632421.1
CDS TCA 72 bp GGATCTTCCATGCCACTATTAACCAGTTTAGGGAGGTaGGATACTGTTTCCAGATCTCCGCCGCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GSSMPLLTSLGR*DTVSRSPPPPP
Trigger: AGGAGGCGGCGGCGGAGATCTGGAAACAGTATCTCACCTCCCTAAACTGGTTAATAGTGGCATGGAAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373839.8
ENST00000463428.5
ENST00000493669.2
ENST00000632202.1
ENST00000632421.1
ENST00000633371.1
CDS CAA 72 bp ACCGGTCTGGAGACATCAGCTTGTCCCATGATTATATaGTCTGATGTATCTCACGACAACAAACTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: TGLETSACPMII*SDVSHDNKLSR
Trigger: CCGGGACAGTTTGTTGTCGTGAGATACATCAGACAATATAATCATGGGACAAGCTGATGTCTCCAGACCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1
CDS CAA 72 bp CAAGGAAGGCTCGGCACGGTGGCTCATCTAACCAATTaGGATTCTGGTTGGAGTTCAGGAAAAACTAAGTTC +
Preference number: 6 (lower is better)
Translates to: QGRLGTVAHLTN*DSGWSSGKTKF
Trigger: GAACTTAGTTTTTCCTGAACTCCAACCAGAATCCAAATTGGTTAGATGAGCCACCGTGCCGAGCCTTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632964.1
CDS CAA 72 bp CTGCTGAAGTTTCTGTTTCCCATACAGCCTGAGCACTaGCAGTTCTTACAAAACTGTCTTCACACTGGCACT +
Preference number: 6 (lower is better)
Translates to: LLKFLFPIQPEH*QFLQNCLHTGT
Trigger: AGTGCCAGTGTGAAGACAGTTTTGTAAGAACTGCAAGTGCTCAGGCTGTATGGGAAACAGAAACTTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633167.1
CDS CAA 90 bp TCTGGATTTACCGGTCTGGAGACATCAGCTTGTCCCATGATTATATaGTCTGATGTATCTCACGACAACAAACTGTCCCGGACAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SGFTGLETSACPMII*SDVSHDNKLSRTKA
Trigger: TGCTTTTGTCCGGGACAGTTTGTTGTCGTGAGATACATCAGACAATATAATCATGGGACAAGCTGATGTCTCCAGACCGGTAAATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1
CDS CAA 90 bp TCAGTTCATCTGCTGAAGTTTCTGTTTCCCATACAGCCTGAGCACTaGCAGTTCTTACAAAACTGTCTTCACACTGGCACTCTTCACACA +
Preference number: 6 (lower is better)
Translates to: SVHLLKFLFPIQPEH*QFLQNCLHTGTLHT
Trigger: TGTGTGAAGAGTGCCAGTGTGAAGACAGTTTTGTAAGAACTGCAAGTGCTCAGGCTGTATGGGAAACAGAAACTTCAGCAGATGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633167.1
CDS TCA 72 bp AGTTCATCTGCTGAAGTTTCTGTTTCCCATACAGCCTaGGCACTTGCAGTTCTTACAAAACTGTCTTCACAC +
Preference number: 6 (lower is better)
Translates to: SSSAEVSVSHTA*ALAVLTKLSSH
Trigger: GTGTGAAGACAGTTTTGTAAGAACTGCAAGTGCTCAGGCTGTATGGGAAACAGAAACTTCAGCAGATGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1
CDS TCA 72 bp TCTGGAGACATCAGCTTGTCCCATGATTATATTGTCTaGTGTATCTCACGACAACAAACTGTCCCGGACAAA +
Preference number: 6 (lower is better)
Translates to: SGDISLSHDYIV*CISRQQTVPDK
Trigger: TTTGTCCGGGACAGTTTGTTGTCGTGAGATACATCAGACAATATAATCATGGGACAAGCTGATGTCTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1
CDS TCA 72 bp CTGGATTTACCGGTCTGGAGACATCAGCTTGTCCCATaGTTATATTGTCTGATGTATCTCACGACAACAAAC +
Preference number: 6 (lower is better)
Translates to: LDLPVWRHQLVP*LYCLMYLTTTN
Trigger: GTTTGTTGTCGTGAGATACATCAGACAATATAATCATGGGACAAGCTGATGTCTCCAGACCGGTAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373836.4
ENST00000633167.1