RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHACTR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000087495

Ensembl transcript IDs: ENST00000355648.8, ENST00000359926.7, ENST00000361300.4, ENST00000371015.6, ENST00000395636.6, ENST00000434923.1, ENST00000473657.1, ENST00000492611.5, ENST00000541461.5

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTaGCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAA +
Preference number: 1 (lower is better)
Translates to: PSCQRPGSGEPAHAR*PSSITLQNCKTRLK
Trigger: TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR GCA 90 bp GTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGT +
Preference number: 1 (lower is better)
Translates to: VCPLVTPLAGKCGQD*TCVCDPTLLTNTAG
Trigger: ACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR TCA 90 bp GATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCTGATGAATGTTCAGTGTTGGTATCA +
Preference number: 1 (lower is better)
Translates to: DPTLLTNTAGRVVLS*TSGKFPDECSVLVS
Trigger: TGATACCAACACTGAACATTCATCAGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR TCA 90 bp GGCAAACAACAGTTTTCTTCTGATAGAGTTATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: GKQQFSSDRVMLGLN*PQQFTLLRHQRRKE
Trigger: TTCCTTCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACATAACTCTATCAGAAGAAAACTGTTGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR TCA 90 bp CACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTaGAAGGCAAACAACAGTTTTCTTCTGATAGAGTTATGTTGGGTC +
Preference number: 1 (lower is better)
Translates to: HVARPPLHCRTVKQG*KANNSFLLIELCWV
Trigger: GACCCAACATAACTCTATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCT +
Preference number: 2 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPKCGQD*TCVCDP
Trigger: AGGATCACACACACAGGTGCAATCTTGACCACACTT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 2 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 2 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTARVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 2 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 2 (lower is better)
Translates to: HARCPSSITLQNCKTRLKMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: HARCPSSITLQNCKTRLKRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 2 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCT +
Preference number: 2 (lower is better)
Translates to: HARCPSSITLQNCKTRLKKCGQD*TCVCDP
Trigger: AGGATCACACACACAGGTGCAATCTTGACCACACTT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 2 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 2 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR GCA 72 bp CAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTaGCCGTCCTCCATTACACTGCAGAACTGTAAAACA +
Preference number: 3 (lower is better)
Translates to: QRPGSGEPAHAR*PSSITLQNCKT
Trigger: TGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR GCA 72 bp CTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCTACTCTTCTCACAAAC +
Preference number: 3 (lower is better)
Translates to: LVTPLAGKCGQD*TCVCDPTLLTN
Trigger: GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR TCA 72 bp CTTCTCACAAACACAGCAGGTAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCTGATGAATGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: LLTNTAGRVVLS*TSGKFPDECSV
Trigger: CACTGAACATTCATCAGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCTACCTGCTGTGTTTGTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
3UTR TCA 72 bp CAGTTTTCTTCTGATAGAGTTATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTCCTCAGACACCAAAGA +
Preference number: 3 (lower is better)
Translates to: QFSSDRVMLGLN*PQQFTLLRHQR
Trigger: TCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACATAACTCTATCAGAAGAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAACGCTGGGGTCACTCTaGGAGCGGCCCCGCGACACG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPTLGSL*ERPRDT
Trigger: CGTGTCGCGGGGCCGCTCGCAGAGTGACCCCAGCGT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACCTGGCGGTGCTTCGTaGCCAGCGCCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPPGGAS*PAPCAA
Trigger: AGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAGAGGCCTGGGAGTGGTaGGCCTGCACATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPEAWEW*ACTCTL
Trigger: CAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTC...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATGGACCGTGGTGAGATaGGGAGACCCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPWTVVR*GDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAAAACTGTCCTGGCGGTaGTTCGTGGCCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPKLSWR*FVASAL
Trigger: CAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACCAGGGTGGCCAGTTTaGTGTTCCTCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPPGWPV*CSSSQG
Trigger: CCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPSSSRP*LPAIFF
Trigger: GAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACTTGGGAGAGCTCATTaGTGGTGGGCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLGRAH*WWAGGC
Trigger: GCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATGTGGTTTTGGAGCTTaGCTTGGGTGGCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPCGFGA*LGWRSG
Trigger: CCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAGCATCCTACACAGCCTaGGGCAGCAGAGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPASYTA*GSRARL
Trigger: AAGCCTTGCTCTGCTGCCCCAGGCTGTGTAGGATGC...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR TCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATCCATTTCCAGGGTTTaGAGATCCTGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPSISRV*RSCPGW
Trigger: CCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPSASPT*EWVVHS
Trigger: AGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACCTGGCGGTGCTTCGTaGCCAGCGCCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKPGGAS*PAPCAA
Trigger: AGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAGGGAGTTCGAATCCCTaGGACCAGATATTCAGGACG +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPGSSNP*DQIFRT
Trigger: CGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCC...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGCCGGTGGACCGTGGTaGGATGCGGAGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVAGGPW*DAETPW
Trigger: CCACGGGGTCTCCGCATCTCACCACGGTCCACCGGC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGTGGCCAGCGCCCTGTaGAGCTCCTCAATGACGCGG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKVASAL*SSSMTR
Trigger: CCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCAC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATCGCTTGTTCTCCAATaGCCCGTCAAAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPSLVLQ*PVKAPS
Trigger: GCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKGGRGR*TVVRCG
Trigger: TCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGAGGCCTGGGAGTGGTaGGCCTGCACATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKEAWEW*ACTCTL
Trigger: CAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTCTTCACCACTGGATaGAGAAGGCATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPFFTTG*RRHLGC
Trigger: GCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAATAGCCTCGCCGGCTaGAGCCAGGCGCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVNSLAG*SQAHPG
Trigger: GCCGGGATGCGCCTGGCTGCAGCCGGCGAGGCTATT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKGRAHW*WAGGCQ
Trigger: CTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGATGCGGAGACCCCGTaGGTGTGGAGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGDAETP*VWRAGP
Trigger: GGGGCCAGCTCTCCACACCCACGGGGTCTCCGCATC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLNDAA*GKRPVD
Trigger: GTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCCTGGCGGTGCTTCGTaGCCAGCGCCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCPGGAS*PAPCAA
Trigger: AGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACGCGCCGGGGGCGTTTaGTCCATCTCATCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRAGGV*SISSCA
Trigger: TGCGCAAGATGAGATGGACCAAACGCCCCCGGCGCG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359926.7
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGCCGGTGGACCGTGGTaGGATGCGGAGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKAGGPW*DAETPW
Trigger: CCACGGGGTCTCCGCATCTCACCACGGTCCACCGGC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGCCGGTGGACCGTGGTaGGATGCGGAGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAAGGPW*DAETPW
Trigger: CCACGGGGTCTCCGCATCTCACCACGGTCCACCGGC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATGTGCAGCTCCTCAATaGCGCGGCTTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKCAAPQ*RGLGEE
Trigger: CTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACCAGGGTGGCCAGTTTaGTGTTCCTCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKPGWPV*CSSSQG
Trigger: CCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACCTCTCGGCCTTGCCTaGCGGCCATCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKPLGLA*RPSSSP
Trigger: TGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGTGGCCAGCGCCCTGTaGAGCTCCTCAATGACGCGG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVVASAL*SSSMTR
Trigger: CCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCAC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGGCCAGCGCCCTGTaGAGCTCCTCAATGACGCGG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCVASAL*SSSMTR
Trigger: CCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCAC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPPGPSQ*PRGFRA
Trigger: AGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCPGPSQ*PRGFRA
Trigger: AGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACTTGGGAGAGCTCATTaGTGGTGGGCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLGRAH*WWAGGC
Trigger: GCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGGAGCTTGCCTTGGGTaGCGGAGTGGGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVGACLG*RSGQQW
Trigger: CCACTGCTGCCCACTCCGCCACCCAAGGCAAGCTCC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGGAGCTTGCCTTGGGTaGCGGAGTGGGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGGACLG*RSGQQW
Trigger: CCACTGCTGCCCACTCCGCCACCCAAGGCAAGCTCC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGATGCGGAGACCCCGTaGGTGTGGAGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCDAETP*VWRAGP
Trigger: GGGGCCAGCTCTCCACACCCACGGGGTCTCCGCATC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACATCTCATCCAGAGCTaGGAGTCACTGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPHLIQS*ESLVSS
Trigger: TGATGAAACCAGTGACTCCCAGCTCTGGATGAGATG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGAAAGACGCCGGGGCTaGCTTCAGGGCGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGERRRG*LQGGET
Trigger: TGTCTCCCCGCCCTGAAGCCAGCCCCGGCGTCTTTC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR TCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKGLGIF*SQRLRL
Trigger: AAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCCGGTGGACCGTGGTaGGATGCGGAGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTAGGPW*DAETPW
Trigger: CCACGGGGTCTCCGCATCTCACCACGGTCCACCGGC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGAGGCCTGGGAGTGGTaGGCCTGCACATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCEAWEW*ACTCTL
Trigger: CAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTGGACCGTGGTGAGATaGGGAGACCCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCWTVVR*GDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAGGCGCATCCCGGCGTaGGCGGCCTCGCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRRIPA*AASLCY
Trigger: ATAACAAAGCGAGGCCGCGCACGCCGGGATGCGCCT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAAGGGGCTTCCGGGCTaGGCATCTTCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKKGLPG*ASSEVS
Trigger: GCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNPGPSQ*PRGFRA
Trigger: AGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAPGPSQ*PRGFRA
Trigger: AGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKPGPSQ*PRGFRA
Trigger: AGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVGRAHW*WAGGCQ
Trigger: CTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGCCCCAGCTAAGGCTTaGGAGAGCTCATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKAPAKA*ESSLVV
Trigger: CACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGGAGCTTGCCTTGGGTaGCGGAGTGGGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCGACLG*RSGQQW
Trigger: CCACTGCTGCCCACTCCGCCACCCAAGGCAAGCTCC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAGATGCGGAGACCCCGTaGGTGTGGAGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKDAETP*VWRAGP
Trigger: GGGGCCAGCTCTCCACACCCACGGGGTCTCCGCATC...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGATGCGGAGACCCCGTaGGTGTGGAGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKDAETP*VWRAGP
Trigger: GGGGCCAGCTCTCCACACCCACGGGGTCTCCGCATC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPGGRGR*TVVRCG
Trigger: TCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCLNDAA*GKRPVD
Trigger: GTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLNDAA*GKRPVD
Trigger: GTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACCTGGCGGTGCTTCGTaGCCAGCGCCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKPGGAS*PAPCAA
Trigger: AGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPIQPLL*RPFTFS
Trigger: AGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGAT...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACTTCATCAGTCCTTCTaGGGAAAATGTTCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLHQSF*GKCSGL
Trigger: AAGACCGGAACATTTTCCCCAGAAGGACTGATGAAG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCGCGCCGGGGGCGTTTaGTCCATCTCATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCRAGGV*SISSRA
Trigger: AGCTCTGGATGAGATGGACCAAACGCCCCCGGCGCG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCGCGCCGGGGGCGTTTaGTCCATCTCATCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRAGGV*SISSGF
Trigger: GAACCCAGATGAGATGGACCAAACGCCCCCGGCGCG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCCCAGCGCAGGGCTGTaGCTTCTCAGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVPSAGL*LLSPLP
Trigger: GGGAAGAGGACTGAGAAGCCACAGCCCTGCGCTGGG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGTCCAAGTGGGCAGCTaGGGACAGTGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGVQVGS*GQWLVQ
Trigger: CTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGAC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTCCAAGTGGGCAGCTaGGGACAGTGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCVQVGS*GQWLVQ
Trigger: CTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGAC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGAGGCCTGGGAGTGGTaGGCCTGCACATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGEAWEW*ACTCTL
Trigger: CAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCCTCTCGGCCTTGCCTaGCGGCCATCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCPLGLA*RPSSSP
Trigger: TGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSSSRP*LPAIFF
Trigger: GAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTGGACCGTGGTGAGATaGGGAGACCCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCWTVVR*GDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACGTGGCCAGCGCCCTGTaGAGCTCCTCAATGACGCGG +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNVASAL*SSSMTR
Trigger: CCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCAC...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCAAACTGTCCTGGCGGTaGTTCGTGGCCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCKLSWR*FVASAL
Trigger: CAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAAACTGTCCTGGCGGTaGTTCGTGGCCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGKLSWR*FVASAL
Trigger: CAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACGTCCTCCATTACACTaGAGAACTGTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPRPPLH*RTVKQG
Trigger: ACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKSASPT*EWVVHS
Trigger: AGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGCTGCATCGTCCAAGTaGGCAGCTGAGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVAASSK*AAEDSG
Trigger: GCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGCTGCATCGTCCAAGTaGGCAGCTGAGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGAASSK*AAEDSG
Trigger: GCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAGAGCTCATTGGTGGTaGGCAGGAGGCTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRAHWW*AGGCQR
Trigger: ACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAGAGCTCATTGGTGGTaGGCAGGAGGCTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGRAHWW*AGGCQR
Trigger: ACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPGRAHW*WAGGCQ
Trigger: CTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCTTGGGAGAGCTCATTaGTGGTGGGCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLGRAH*WWAGGC
Trigger: GCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAATCTCTCCAGAGGTCTaGGAGGACTGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKISPEV*EDCPGS
Trigger: ACTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGAT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACGGCACTCTTCATGCTaGAGGCTTGGAAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRHSSC*RLGRVW
Trigger: CCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKGGRGR*TVVRCG
Trigger: TCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNGGRGR*TVVRCG
Trigger: TCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCC...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACCTGGCGGTGCTTCGTaGCCAGCGCCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTPGGAS*PAPCAA
Trigger: AGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATGCCCCGCTCCACGCTaGACGTTCTCGACAGACGGA +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGCPAPR*TFSTDG
Trigger: TCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTGCCCCGCTCCACGCTaGACGTTCTCGACAGACGGA +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPCPAPR*TFSTDG
Trigger: TCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTGCCCCGCTCCACGCTaGACGTTCTCGACAGACGGA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCCPAPR*TFSTDG
Trigger: TCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCAGGGGGTGATGTCCTaGAATGTCTGGGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPQGVMS*NVWGRS
Trigger: GGAGCGCCCCCAGACATTCCAGGACATCACCCCCTG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTCCATCTCATCTCCGTaGCTCTTCCCAGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSISSP*LFPAQG
Trigger: GCCCTGCGCTGGGAAGAGCCACGGAGATGAGATGGA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACGCGCCGGGGGCGTTTaGTCCATCTCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKRAGGV*SISSPW
Trigger: CCACGGAGATGAGATGGACCAAACGCCCCCGGCGCG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGGLGIF*SQRLRL
Trigger: AAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTCCAAGTGGGCAGCTaGGGACAGTGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPVQVGS*GQWLVQ
Trigger: CTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGAC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGTCCAAGTGGGCAGCTaGGGACAGTGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCVQVGS*GQWLVQ
Trigger: CTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGAC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTGTGCAGCTCCTCAATaGCGCGGCTTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPCAAPQ*RGLGEE
Trigger: CTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAGCGCCTCCTCGTCCTaGTACAAAAGCAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKSASSS*YKSKSS
Trigger: AGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATGCCTTATCTGCTGCTaGCAGTCTCGTCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKCLICC*QSRPGF
Trigger: AAACCCTGGACGAGACTGTCAGCAGCAGATAAGGCA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGAGGCCTGGGAGTGGTaGGCCTGCACATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAEAWEW*ACTCTL
Trigger: CAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACGAGGCCTGGGAGTGGTaGGCCTGCACATGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNEAWEW*ACTCTL
Trigger: CAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTC...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATGCCTGCTGAACTGCTaGGTAGAGCCGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKCLLNC*VEPPVP
Trigger: GGGCACAGGCGGCTCTACTCAGCAGTTCAGCAGGCA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCAACAGGGGAGGTCTTaGGACCAACCAGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGQQGRS*DQPGVR
Trigger: CCTGACTCCTGGTTGGTCTCAAGACCTCCCCTGTTG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACCAGGGTGGCCAGTTTaGTGTTCCTCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGPGWPV*CSSSQG
Trigger: CCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACCTCTCGGCCTTGCCTaGCGGCCATCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGPLGLA*RPSSSP
Trigger: TGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCSSSRP*LPAIFF
Trigger: GAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGAGGCTGCCAGCGTCTaGTTCTTCACCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCEAASV*FFTTGC
Trigger: GCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGGACCGTGGTGAGATaGGGAGACCCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKWTVVR*GDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATGGACCGTGGTGAGATaGGGAGACCCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAWTVVR*GDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAAAACTGTCCTGGCGGTaGTTCGTGGCCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKKLSWR*FVASAL
Trigger: CAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAAACTGTCCTGGCGGTaGTTCGTGGCCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKKLSWR*FVASAL
Trigger: CAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACGACTTGGGAGTGGGTaGTTCACTCTGTACAGATCG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRLGSG*FTLYRS
Trigger: CGATCTGTACAGAGTGAACCACCCACTCCCAAGTCG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKSPTWE*VVHSVQ
Trigger: CTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAAGGGGCTTCCGGGCTaGGCATCTTCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVKGLPG*ASSEVS
Trigger: GCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAAGGGGCTTCCGGGCTaGGCATCTTCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCKGLPG*ASSEVS
Trigger: GCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGCTGCATCGTCCAAGTaGGCAGCTGAGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPAASSK*AAEDSG
Trigger: GCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGCTGCATCGTCCAAGTaGGCAGCTGAGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGAASSK*AAEDSG
Trigger: GCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAGAGCTCATTGGTGGTaGGCAGGAGGCTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGRAHWW*AGGCQR
Trigger: ACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKGRAHW*WAGGCQ
Trigger: CTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCC...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAGRAHW*WAGGCQ
Trigger: CTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTTTGGAGCTTGCCTTaGGTGGCGGAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVFWSLP*VAEWAA
Trigger: TGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTTTGGAGCTTGCCTTaGGTGGCGGAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCFWSLP*VAEWAA
Trigger: TGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATTCATGCTGGAGGCTTaGAAGAGTGTGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKFMLEA*KSVAWP
Trigger: AGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNLNDAA*GKRPVD
Trigger: GTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGCCCCGCTCCACGCTaGACGTTCTCGACAGACGGA +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKCPAPR*TFSTDG
Trigger: TCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTAGAGCGAGCCGCGTaGAATCAGAGCATCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLERAA*NQSIRG
Trigger: GCCTCGGATGCTCTGATTCCACGCGGCTCGCTCTAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATTGGTCCATCTCATCTaGGTTCTCCCCGGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLVHLI*VLPGVR
Trigger: GCGGACGCCGGGGAGAACCCAGATGAGATGGACCAA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCGCCCAAACCTTGCCTaGTCTGGACTGTTCACCGGA +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRPNLA*SGLFTG
Trigger: TCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAGGATGAGAGGTGGCTaGCAAACCCCTATAGATCGC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRMRGG*QTPIDR
Trigger: GCGATCTATAGGGGTTTGCCAGCCACCTCTCATCCT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTCCACGGCAGGTCTTTaGCTCAGCCGTCTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSTAGL*LSRLRK
Trigger: TTTCCGCAGACGGCTGAGCCAAAGACCTGCCGTGGA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTCCATTTCCAGGGTTTaGAGATCCTGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSISRV*RSCPGW
Trigger: CCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPGLGIF*SQRLRL
Trigger: AAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCGLGIF*SQRLRL
Trigger: AAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAGTCCAAGTGGGCAGCTaGGGACAGTGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKVQVGS*GQWLVQ
Trigger: CTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGAC...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGTCCAAGTGGGCAGCTaGGGACAGTGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKVQVGS*GQWLVQ
Trigger: CTGGACAAGCCACTGTCCTCAGCTGCCCACTTGGAC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGTGCAGCTCCTCAATaGCGCGGCTTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKCAAPQ*RGLGEE
Trigger: CTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATGTGCAGCTCCTCAATaGCGCGGCTTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKCAAPQ*RGLGEE
Trigger: CTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTGGGGTCTGCAAGGATaGGAGGTGGCTGGCAAACCC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNWGLQG*EVAGKP
Trigger: GGGTTTGCCAGCCACCTCTCATCCTTGCAGACCCCA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCCTCTCGGCCTTGCCTaGCGGCCATCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNPLGLA*RPSSSP
Trigger: TGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACCTCTCGGCCTTGCCTaGCGGCCATCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKPLGLA*RPSSSP
Trigger: TGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKSSSRP*LPAIFF
Trigger: GAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATTGCTTTCAGCATCCTaGTCCATCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLLSAS*SIISSS
Trigger: GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACGGGGTTGCAAGTTTTaGTTTCAGCATCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRGCKF*FQHPAP
Trigger: TGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGAGGCTGCCAGCGTCTaGTTCTTCACCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCEAASV*FFTTGC
Trigger: GCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGAGGCTGCCAGCGTCTaGTTCTTCACCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPEAASV*FFTTGC
Trigger: GCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTGTGGTTTTGGAGCTTaGCTTGGGTGGCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCCGFGA*LGWRSG
Trigger: CCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTGTGGTTTTGGAGCTTaGCTTGGGTGGCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPCGFGA*LGWRSG
Trigger: CCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCGRHSS*WRLGRV
Trigger: CACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATGGACCGTGGTGAGATaGGGAGACCCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTWTVVR*GDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGGTCCATCTCATCTTaGGCAGGATCTCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKWSISS*AGSRAA
Trigger: CGCCGCCCGAGATCCTGCGCAAGATGAGATGGACCA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359926.7
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGAGTGTGGCTTGGCCTaGATCGTCCAAGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKECGLA*IVQVGS
Trigger: GCTGCCCACTTGGACGATGCAGGCCAAGCCACACTC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATCTTGTCAGCAAGCATaGAGCCCAGCTCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGSCQQA*SPARAL
Trigger: CAGCGCTCGAGCTGGGCTGCATGCTTGCTGACAAGA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACATGCTTCCCAGCACTaGCTCCGTTGTCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKHASQH*LRCQHG
Trigger: CCCGTGCTGACAACGGAGGCAGTGCTGGGAAGCATG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCATGCTGGGAGATTCATaGTTCCCAGCACTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGMLGDS*FPALPP
Trigger: CGGAGGCAGTGCTGGGAAGCATGAATCTCCCAGCAT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSASPT*EWVVHS
Trigger: AGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSASPT*EWVVHS
Trigger: AGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCAAGGGGCTTCCGGGCTaGGCATCTTCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCKGLPG*ASSEVS
Trigger: GCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTAAGGGGCTTCCGGGCTaGGCATCTTCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPKGLPG*ASSEVS
Trigger: GCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAAGGGGCTTCCGGGCTaGGCATCTTCTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGKGLPG*ASSEVS
Trigger: GCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAAGAGCTCATTGGTGGTaGGCAGGAGGCTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTARAHWW*AGGCQR
Trigger: ACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCTTGGGAGAGCTCATTaGTGGTGGGCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNLGRAH*WWAGGC
Trigger: GCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGCCCCAGCTAAGGCTTaGGAGAGCTCATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPAPAKA*ESSLVV
Trigger: CACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGCCCCAGCTAAGGCTTaGGAGAGCTCATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCAPAKA*ESSLVV
Trigger: CACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTTTGGAGCTTGCCTTaGGTGGCGGAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCFWSLP*VAEWAA
Trigger: TGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCGGCACTCTTCATGCTaGAGGCTTGGAAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRHSSC*RLGRVW
Trigger: CCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLNDAA*GKRPVD
Trigger: GTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTCCACGGCAGGTCTTTaGCTCAGCCGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVSTAGL*LSRLES
Trigger: GCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTCCACGGCAGGTCTTTaGCTCAGCCGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSTAGL*LSRLES
Trigger: GCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTGGCTTAGGGAGGGGTaGGTAGCACCACCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCWLREG*VAPPVF
Trigger: GAAAACAGGTGGTGCTACCCACCCCTCCCTAAGCCA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCAGAGGGATCCTGGATaGAGGGCTTTATCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCQRDPG*RALSSP
Trigger: TGGGGAAGATAAAGCCCTTCATCCAGGATCCCTCTG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355648.8
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGGGAGTTCGAATCCCTaGGACCAGATATTCAGGACG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVGSSNP*DQIFRT
Trigger: CGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTCCATTTCCAGGGTTTaGAGATCCTGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCSISRV*RSCPGW
Trigger: CCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKGLGIF*SQRLRL
Trigger: AAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGCCGGTGGACCGTGGTaGGATGCGGAGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDAGGPW*DAETPW
Trigger: CCACGGGGTCTCCGCATCTCACCACGGTCCACCGGC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATGTGCAGCTCCTCAATaGCGCGGCTTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTCAAPQ*RGLGEE
Trigger: CTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAGCGCCTCCTCGTCCTaGTACAAAAGCAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVSASSS*YKSKSS
Trigger: AGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAAGGCTTGGGCCCCATaGGCCAGAATGGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNKAWAP*ARMDWV
Trigger: AACCCAGTCCATTCTGGCTCATGGGGCCCAAGCCTT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAAGGCTTGGGCCCCATaGGCCAGAATGGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKKAWAP*ARMDWV
Trigger: AACCCAGTCCATTCTGGCTCATGGGGCCCAAGCCTT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCAGCCTTGGGAGCACTaGTCTCTCCTTCCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNQPWEH*SLLPAF
Trigger: GAAAGCCGGAAGGAGAGATCAGTGCTCCCAAGGCTG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACCAGGGTGGCCAGTTTaGTGTTCCTCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTPGWPV*CSSSQG
Trigger: CCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACCTCTCGGCCTTGCCTaGCGGCCATCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTPLGLA*RPSSSP
Trigger: TGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTSSSRP*LPAIFF
Trigger: GAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGTCCTCCATCGGGGTTaGAAGTTTTGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKVLHRG*KFCFQH
Trigger: ATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGAC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATGTGGTTTTGGAGCTTaGCTTGGGTGGCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTACGFGA*LGWRSG
Trigger: CCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTCGCTTGTTCTCCAATaGCCCGTCAAAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVSLVLQ*PVKAPS
Trigger: GCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCCAGGAGCTCCTTCTTaGATTTCCGTGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCPGAPS*ISVAVF
Trigger: GAACACTGCCACGGAAATGCAAGAAGGAGCTCCTGG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCCAGGAGCTCCTTCTTaGATTTCCGTGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVPGAPS*ISVAVF
Trigger: GAACACTGCCACGGAAATGCAAGAAGGAGCTCCTGG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCCAGGAGCTCCTTCTTaGATTTCCGTGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGPGAPS*ISVAVF
Trigger: GAACACTGCCACGGAAATGCAAGAAGGAGCTCCTGG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLLVPV*LAGSLA
Trigger: AGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKFISIC*RISCLS
Trigger: AGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACCTGCACATGCACGTTaGCCGTCCTCCATTACACTG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGPAHAR*PSSITL
Trigger: CAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCCTGCACATGCACGTTaGCCGTCCTCCATTACACTG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCPAHAR*PSSITL
Trigger: CAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCCTGCACATGCACGTTaGCCGTCCTCCATTACACTG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPPAHAR*PSSITL
Trigger: CAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAAATGGCCACCGCAGATaGATCCTACACAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTANGHRR*ILHSLG
Trigger: CCCCAGGCTGTGTAGGATGCATCTGCGGTGGCCATT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACTGTCGCCCAAACCTTaGCTGGTCTGGACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLSPKP*LVWTVH
Trigger: GTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGTCCATCTCATCTTATaGTCACAGAGGGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKVHLIL*SQRDPG
Trigger: TCCAGGATCCCTCTGTGACCATAAGATGAGATGGAC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355648.8
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACGCGCCGGGGGCGTTTaGTCCATCTCATCTTATGGT +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKRAGGV*SISSYG
Trigger: ACCATAAGATGAGATGGACCAAACGCCCCCGGCGCG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355648.8
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAGATCCTGCCCAGGGTaGCCAGTTTGCTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNRSCPG*PVCCSS
Trigger: GGAGGAACAGCAAACTGGCCACCCTGGGCAGGATCT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSPTWE*VVHSVQ
Trigger: CTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSASPT*EWVVHS
Trigger: AGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCTGCATCGTCCAAGTaGGCAGCTGAGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTAASSK*AAEDSG
Trigger: GCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGCCCCAGCTAAGGCTTaGGAGAGCTCATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAAPAKA*ESSLVV
Trigger: CACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATTTTGGAGCTTGCCTTaGGTGGCGGAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKFWSLP*VAEWAA
Trigger: TGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTCATGCTGGAGGCTTaGAAGAGTGTGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCFMLEA*KSVAWP
Trigger: AGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTCATGCTGGAGGCTTaGAAGAGTGTGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVFMLEA*KSVAWP
Trigger: AGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCGGCACTCTTCATGCTaGAGGCTTGGAAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCRHSSC*RLGRVW
Trigger: CCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCCACGGCAGGTCTTTaGCTCAGCCGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSTAGL*LSRLES
Trigger: GCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTCCACGGCAGGTCTTTaGCTCAGCCGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCSTAGL*LSRLES
Trigger: GCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACCTGCATCGTCCAAGTaGGCAGCTGAGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTPASSK*AAEDSG
Trigger: GCCACTGTCCTCAGCTGCCCACTTGGACGATGCAGG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAAACCTTGCCTGGTCTaGACTGTTCACCGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCKPCLV*TVHRSS
Trigger: ACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGGGAGTTCGAATCCCTaGGACCAGATATTCAGGACG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPGSSNP*DQIFRT
Trigger: CGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATCCATTTCCAGGGTTTaGAGATCCTGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKSISRV*RSCPGW
Trigger: CCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTAGCGCCTCCTCGTCCTaGTACAAAAGCAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSASSS*YKSKSS
Trigger: AGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTGCCTTATCTGCTGCTaGCAGTCTCGTCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCCLICC*QSRPGF
Trigger: AAACCCTGGACGAGACTGTCAGCAGCAGATAAGGCA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATGCCTTATCTGCTGCTaGCAGTCTCGTCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGCLICC*QSRPGF
Trigger: AAACCCTGGACGAGACTGTCAGCAGCAGATAAGGCA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCAGGAGTCAGGAGAATaGACTGATCCTCTCCCGTAC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPQESGE*TDPLPY
Trigger: GTACGGGAGAGGATCAGTTCATTCTCCTGACTCCTG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTGCTTTCAGCATCCTaGTCCATCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCLLSAS*SIISSS
Trigger: GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCGGGGTTGCAAGTTTTaGTTTCAGCATCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRGCKF*FQHPAP
Trigger: TGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCGGGGTTGCAAGTTTTaGTTTCAGCATCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCRGCKF*FQHPAP
Trigger: TGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTCTTCACCACTGGATaGAGAAGGCATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCFFTTG*RRHLGC
Trigger: GCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGAGGCTGCCAGCGTCTaGTTCTTCACCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTEAASV*FFTTGC
Trigger: GCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKGRHSS*WRLGRV
Trigger: CACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAGRHSS*WRLGRV
Trigger: CACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKGRHSS*WRLGRV
Trigger: CACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACC...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATCGCTTGTTCTCCAATaGCCCGTCAAAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGSLVLQ*PVKAPS
Trigger: GCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCGCTTGTTCTCCAATaGCCCGTCAAAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSLVLQ*PVKAPS
Trigger: GCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCCAGGAGCTCCTTCTTaGATTTCCGTGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCPGAPS*ISVAVF
Trigger: GAACACTGCCACGGAAATGCAAGAAGGAGCTCCTGG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAGCTTCATCTCGATCTaGTGCCGGATCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSFISI*CRISCL
Trigger: AAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACCTGCACATGCACGTTaGCCGTCCTCCATTACACTG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKPAHAR*PSSITL
Trigger: CAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACCTGCACATGCACGTTaGCCGTCCTCCATTACACTG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKPAHAR*PSSITL
Trigger: CAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAATTCCACCTGGGGTCTaGAAGGATGAGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKIPPGV*KDERWL
Trigger: CAGCCACCTCTCATCCTTGCAGACCCCAGGTGGAAT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCGACTTGGGAGTGGGTaGTTCACTCTGTACAGATCG +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPRLGSG*FTLYRS
Trigger: CGATCTGTACAGAGTGAACCACCCACTCCCAAGTCG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCGACTTGGGAGTGGGTaGTTCACTCTGTACAGATCG +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCRLGSG*FTLYRS
Trigger: CGATCTGTACAGAGTGAACCACCCACTCCCAAGTCG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGSPTWE*VVHSVQ
Trigger: CTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCTGCTTCTTCACCACTaGATGCAGAAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCLLLHH*MQKASW
Trigger: CCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCTGCTTCTTCACCACTaGATGCAGAAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLLLHH*MQKASW
Trigger: CCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAATCTCTCCAGAGGTCTaGGAGGACTGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAISPEV*EDCPGS
Trigger: ACTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGAT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACATCTCTCCAGAGGTCTaGGAGGACTGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNISPEV*EDCPGS
Trigger: ACTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGAT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAATCTCTCCAGAGGTCTaGGAGGACTGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKISPEV*EDCPGS
Trigger: ACTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGAT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTTCATGCTGGAGGCTTaGAAGAGTGTGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPFMLEA*KSVAWP
Trigger: AGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACGGCACTCTTCATGCTaGAGGCTTGGAAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTARHSSC*RLGRVW
Trigger: CCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGATGCGGAGACCCCGTaGGTGTGGAGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDDAETP*VWRAGP
Trigger: GGGGCCAGCTCTCCACACCCACGGGGTCTCCGCATC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCCTGGCGGTGCTTCGTaGCCAGCGCCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDPGGAS*PAPCAA
Trigger: AGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTCCACGGCAGGTCTTTaGCTCAGCCGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSTAGL*LSRLES
Trigger: GCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCTCTGGAGAGAAGAATaGCCACCGCAGATGCATCCT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLWREE*PPQMHP
Trigger: AGGATGCATCTGCGGTGGCCATTCTTCTCTCCAGAG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACTCTGGAGAGAAGAATaGCCACCGCAGATGCATCCT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLWREE*PPQMHP
Trigger: AGGATGCATCTGCGGTGGCCATTCTTCTCTCCAGAG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATGGAAGAGTGTGGCTTaGCCTGCATCGTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKWKSVA*PASSKW
Trigger: CCACTTGGACGATGCAGGCCAAGCCACACTCTTCCA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAAGGCTTGGAAGAGTGTaGCTTGGCCTGCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKRLGRV*LGLHRP
Trigger: TGGACGATGCAGGCCAAGCCACACTCTTCCAAGCCT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTGGATCCAGAGATGCTaGGAGATTCATGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGWIQRC*EIHASQ
Trigger: CTGGGAAGCATGAATCTCCCAGCATCTCTGGATCCA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCTGTTTTCAGGCTTCTaGATCCAGAGATGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLFSGF*IQRCWE
Trigger: CTCCCAGCATCTCTGGATCCAGAAGCCTGAAAACAG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTGCAAGGATGAGAGGTaGCTGGCAAACCCCTATAGA +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVCKDER*LANPYR
Trigger: TCTATAGGGGTTTGCCAGCCACCTCTCATCCTTGCA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACGGGAGTTCGAATCCCTaGGACCAGATATTCAGGACG +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNGSSNP*DQIFRT
Trigger: CGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCC...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATCCATTTCCAGGGTTTaGAGATCCTGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTSISRV*RSCPGW
Trigger: CCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTACTTTCTCTTCCTTaGAAACTGTCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLLSLP*KLSWRC
Trigger: GCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTACTTTCTCTTCCTTaGAAACTGTCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCLLSLP*KLSWRC
Trigger: GCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAGCGCCTCCTCGTCCTaGTACAAAAGCAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSASSS*YKSKSS
Trigger: AGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATGCCTTATCTGCTGCTaGCAGTCTCGTCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTACLICC*QSRPGF
Trigger: AAACCCTGGACGAGACTGTCAGCAGCAGATAAGGCA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTGGCCGAGGAGTCGGTaGGGACGCTGGGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDWPRSR*GRWGHS
Trigger: AGAGTGACCCCAGCGTCCTCACCGACTCCTCGGCCA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR GCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAGCGCTGACGTTGTCTaGTTCAGTTTTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKSADVV*FSFSFF
Trigger: GAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACGGGGTTGCAAGTTTTaGTTTCAGCATCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGRGCKF*FQHPAP
Trigger: TGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCGGGGTTGCAAGTTTTaGTTTCAGCATCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCRGCKF*FQHPAP
Trigger: TGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGTCCTCCATCGGGGTTaGAAGTTTTGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVVLHRG*KFCFQH
Trigger: ATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGAC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGTCCTCCATCGGGGTTaGAAGTTTTGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGVLHRG*KFCFQH
Trigger: ATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGAC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTCTTCACCACTGGATaGAGAAGGCATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCFFTTG*RRHLGC
Trigger: GCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTGRHSS*WRLGRV
Trigger: CACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGTGGCCAGCGCCCTGTaGAGCTCCTCAATGACGCGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDVASAL*SSSMTR
Trigger: CCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCAC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLLVPV*LAGSLA
Trigger: AGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLLVPV*LAGSLA
Trigger: AGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCFISIC*RISCLS
Trigger: AGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGFISIC*RISCLS
Trigger: AGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAGCTTCATCTCGATCTaGTGCCGGATCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGSFISI*CRISCL
Trigger: AAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATCAGTGTTTATTGCGTaGTTGGGGCAGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTASVFIA*LGQGVM
Trigger: CATCACCCCCTGCCCCAAGCACGCAATAAACACTGA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR GCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTCTGGATCCAGAGATaGTGGGAGATTCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVFWIQR*WEIHAS
Trigger: GGAAGCATGAATCTCCCAGCATCTCTGGATCCAGAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACCATAGTGGCTGCCTaGAAATTCCACCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNTIVAA*KFHLGS
Trigger: AGACCCCAGGTGGAATTTGCAGGCAGCCACTATGGT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATTGCACCATAGTGGCTaGCTGCAAATTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLHHSG*LQIPPG
Trigger: CCCAGGTGGAATTTGCAGGCAGCCACTATGGTGCAA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACGACTTGGGAGTGGGTaGTTCACTCTGTACAGATCG +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTARLGSG*FTLYRS
Trigger: CGATCTGTACAGAGTGAACCACCCACTCCCAAGTCG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSPTWE*VVHSVQ
Trigger: CTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKSPTWE*VVHSVQ
Trigger: CTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACTGCTTCTTCACCACTaGATGCAGAAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLLLHH*MQKASW
Trigger: CCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGGAGCTTGCCTTGGGTaGCGGAGTGGGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDGACLG*RSGQQW
Trigger: CCACTGCTGCCCACTCCGCCACCCAAGGCAAGCTCC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDGGRGR*TVVRCG
Trigger: TCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATCCACGGCAGGTCTTTaGCTCAGCCGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTSTAGL*LSRLES
Trigger: GCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCATCTCATCCAGAGCTaGGAGTCACTGGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGHLIQS*ESLVSS
Trigger: TGATGAAACCAGTGACTCCCAGCTCTGGATGAGATG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGCQVLA*CMYLHF
Trigger: GAAATGGAGGTACATGCATCAAGCAAGCACTTGACA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCCCAGCTCGAGCGCTaGATAAAAACTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTAQLER*IKTGNL
Trigger: GAGATTCCCAGTTTTTATTCAGCGCTCGAGCTGGGC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAGGTCTTCATTTTTCTaGTCTGTCGCCCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVRSSFF*SVAQTL
Trigger: CAAGGTTTGGGCGACAGATCAGAAAAATGAAGACCT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTTGCTTTCAGCATCCTaGTCCATCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNLLSAS*SIISSS
Trigger: GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATTGCTTTCAGCATCCTaGTCCATCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALLSAS*SIISSS
Trigger: GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATTGCTTTCAGCATCCTaGTCCATCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLLSAS*SIISSS
Trigger: GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGTCCTCCATCGGGGTTaGAAGTTTTGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCVLHRG*KFCFQH
Trigger: ATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGAC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATTCTTCACCACTGGATaGAGAAGGCATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKFFTTG*RRHLGC
Trigger: GCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAAACTGTCCTGGCGGTaGTTCGTGGCCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDKLSWR*FVASAL
Trigger: CAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPLLVPV*LAGSLA
Trigger: AGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGFISIC*RISCLS
Trigger: AGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAAGCTTCATCTCGATCTaGTGCCGGATCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKSFISI*CRISCL
Trigger: AAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAGCTTCATCTCGATCTaGTGCCGGATCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKSFISI*CRISCL
Trigger: AAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACTCCCCGCGGGCTTCTaGAGTCTTTCTCTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLPAGF*SLSLKS
Trigger: AGATTTGAGAGAAAGACTCCAGAAGCCCGCGGGGAG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355648.8
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTTGGCTCAGCCGTTTaGAAAGCTTCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVFGSAV*KASSRS
Trigger: AGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTTGGCTCAGCCGTTTaGAAAGCTTCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCFGSAV*KASSRS
Trigger: AGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCAGGAAGTGTGTCCTCTaGTTACTCCTCTTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCRKCVL*LLLLQV
Trigger: TACCTGCAAGAGGAGTAACCAGAGGACACACTTCCT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTTACTTTCTCTTCCTTaGAAACTGTCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNLLSLP*KLSWRC
Trigger: GCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATTACTTTCTCTTCCTTaGAAACTGTCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALLSLP*KLSWRC
Trigger: GCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCCQVLA*CMYLHF
Trigger: GAAATGGAGGTACATGCATCAAGCAAGCACTTGACA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAGGGTAGTCTTGAGCTaGACTTCAGGAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKRVVLS*TSGKFP
Trigger: AGGGAACTTTCCTGAAGTTCAGCTCAAGACTACCCT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAATGTTGGGTCTTAACTaGCCCCAACAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAMLGLN*PQQFTL
Trigger: GAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACAT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGGAAGGAGAGAAAGTaGACCTTTGGTTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKWKERK*TFGCCL
Trigger: GAGGCAACAACCAAAGGTTCACTTTCTCTCCTTCCA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGTCAGGAGAATGAACTaGTCCTCTCCCGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGVRRMN*SSPVLF
Trigger: AAAAAGTACGGGAGAGGATCAGTTCATTCTCCTGAC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCCAGGGTGGCCAGTTTaGTGTTCCTCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDPGWPV*CSSSQG
Trigger: CCCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAGCGCTGACGTTGTCTaGTTCAGTTTTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSADVV*FSFSFF
Trigger: GAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDSSSRP*LPAIFF
Trigger: GAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACGGGGTTGCAAGTTTTaGTTTCAGCATCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTRGCKF*FQHPAP
Trigger: TGGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALLVPV*LAGSLA
Trigger: AGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKFISIC*RISCLS
Trigger: AGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAAGCTTCATCTCGATCTaGTGCCGGATCTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTSFISI*CRISCL
Trigger: AAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCATAGTCCTGCGCTTTTaGTACTTCCACGTAATCACT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGIVLRF*YFHVIT
Trigger: AGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTAT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTATCTTGTCAAGTGCTTaGTTGATGCATGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCILSSA*LMHVPP
Trigger: TGGAGGTACATGCATCAAGCAAGCACTTGACAAGAT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTGGAATCTTGTCAAGTaGTTGCTTGATGCATGTACC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGWNLVK*LLDACT
Trigger: GGTACATGCATCAAGCAAGCACTTGACAAGATTCCA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCKCGQD*TCVCDP
Trigger: AGGATCACACACACAGGTGCAATCTTGACCACACTT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCGTCCTCCATTACACTaGAGAACTGTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCRPPLH*RTVKQG
Trigger: ACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATTTCATCAGGTTTCTTaGTGGACTGACTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGFHQVS*WTDSFQ
Trigger: CTGGAAGGAGTCAGTCCAGCAAGAAACCTGATGAAA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGIQPLL*RPFTFS
Trigger: AGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGAT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCTTCATCAGTCCTTCTaGGGAAAATGTTCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLHQSF*GKCSGL
Trigger: AAGACCGGAACATTTTCCCCAGAAGGACTGATGAAG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAGAAGAAAATCTCTATaGCCTGTGGAATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GEPAHARCPSSITLQNCKRRKSL*PVESCQ
Trigger: TTGACAAGATTCCACAGGCCATAGAGATTTTCTTCT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATTACTTTCTCTTCCTTaGAAACTGTCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLLSLP*KLSWRC
Trigger: GCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTCAACAGTGGGTCTCTaGTTAAGCTTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSTVGL*LSFLVN
Trigger: ATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTCAACAGTGGGTCTCTaGTTAAGCTTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCSTVGL*LSFLVN
Trigger: ATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKCQVLA*CMYLHF
Trigger: GAAATGGAGGTACATGCATCAAGCAAGCACTTGACA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKCQVLA*CMYLHF
Trigger: GAAATGGAGGTACATGCATCAAGCAAGCACTTGACA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGTCCTCCATCGGGGTTaGAAGTTTTGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTVLHRG*KFCFQH
Trigger: ATGCTGAAAGCAAAACTTGCAACCCCGATGGAGGAC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGAGGCTGCCAGCGTCTaGTTCTTCACCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDEAASV*FFTTGC
Trigger: GCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTGTGGTTTTGGAGCTTaGCTTGGGTGGCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDCGFGA*LGWRSG
Trigger: CCCACTCCGCCACCCAAGGCAAGCTCCAAAACCACA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAATAGTCCTGCGCTTTTaGTACTTCCACGTAATCACT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGIVLRF*YFHVIT
Trigger: AGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTAT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCATAGTCCTGCGCTTTTaGTACTTCCACGTAATCACT +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCIVLRF*YFHVIT
Trigger: AGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTAT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCATCTTGTCAAGTGCTTaGTTGATGCATGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCILSSA*LMHVPP
Trigger: TGGAGGTACATGCATCAAGCAAGCACTTGACAAGAT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAATCTTGTCAAGTGCTTaGTTGATGCATGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGILSSA*LMHVPP
Trigger: TGGAGGTACATGCATCAAGCAAGCACTTGACAAGAT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTATCTTGTCAAGTGCTTaGTTGATGCATGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPILSSA*LMHVPP
Trigger: TGGAGGTACATGCATCAAGCAAGCACTTGACAAGAT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTGGAATCTTGTCAAGTaGTTGCTTGATGCATGTACC +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPWNLVK*LLDACT
Trigger: GGTACATGCATCAAGCAAGCACTTGACAAGATTCCA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNKCGQD*TCVCDP
Trigger: AGGATCACACACACAGGTGCAATCTTGACCACACTT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAKCGQD*TCVCDP
Trigger: AGGATCACACACACAGGTGCAATCTTGACCACACTT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACGTCCTCCATTACACTaGAGAACTGTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGRPPLH*RTVKQG
Trigger: ACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTTTCATCAGGTTTCTTaGTGGACTGACTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNFHQVS*WTDSFQ
Trigger: CTGGAAGGAGTCAGTCCAGCAAGAAACCTGATGAAA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAGATCCTGCCCAGGGTaGCCAGTTTGCTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDRSCPG*PVCCSS
Trigger: GGAGGAACAGCAAACTGGCCACCCTGGGCAGGATCT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTTTGGAGCTTGCCTTaGGTGGCGGAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDFWSLP*VAEWAA
Trigger: TGCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKIQPLL*RPFTFS
Trigger: AGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGAT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAIQPLL*RPFTFS
Trigger: AGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGAT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNIQPLL*RPFTFS
Trigger: AGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGAT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACTTCATCAGTCCTTCTaGGGAAAATGTTCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLHQSF*GKCSGL
Trigger: AAGACCGGAACATTTTCCCCAGAAGGACTGATGAAG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACTTCATCAGTCCTTCTaGGGAAAATGTTCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALHQSF*GKCSGL
Trigger: AAGACCGGAACATTTTCCCCAGAAGGACTGATGAAG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTTTGGCTCAGCCGTTTaGAAAGCTTCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNFGSAV*KASSRS
Trigger: AGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGCATCCTACACAGCCTaGGGCAGCAGAGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDASYTA*GSRARL
Trigger: AAGCCTTGCTCTGCTGCCCCAGGCTGTGTAGGATGC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CCA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGTTGTTGCCTCTTGCTaGCAAAATCAAGTCAGACTT +
Preference number: 4 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGVVASC*QNQVRL
Trigger: AAGTCTGACTTGATTTTGCCAGCAAGAGGCAACAAC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTCCATTTCCAGGGTTTaGAGATCCTGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDSISRV*RSCPGW
Trigger: CCACCCTGGGCAGGATCTTCAAACCCTGGAAATGGA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCAACAGTGGGTCTCTaGTTAAGCTTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSTVGL*LSFLVN
Trigger: ATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCTTCCACGTAATCACTaGATCGTATCAGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLPRNH*IVSEFF
Trigger: GAAAAATTCTGATACGATTCAGTGATTACGTGGAAG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCTTCCACGTAATCACTaGATCGTATCAGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLPRNH*IVSEFF
Trigger: GAAAAATTCTGATACGATTCAGTGATTACGTGGAAG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTCQVLA*CMYLHF
Trigger: GAAATGGAGGTACATGCATCAAGCAAGCACTTGACA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATTGCACCTGTGTGTGTaGTCCTACTCTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLHLCV*SYSSHK
Trigger: TTTGTGAGAAGAGTAGGATCACACACACAGGTGCAA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAAGCGCTGACGTTGTCTaGTTCAGTTTTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKSADVV*FSFSFF
Trigger: GAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAGCGCTGACGTTGTCTaGTTCAGTTTTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSADVV*FSFSFF
Trigger: GAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAATAGTCCTGCGCTTTTaGTACTTCCACGTAATCACT +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKIVLRF*YFHVIT
Trigger: AGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTAT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAATCTTGTCAAGTGCTTaGTTGATGCATGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKILSSA*LMHVPP
Trigger: TGGAGGTACATGCATCAAGCAAGCACTTGACAAGAT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAATCTTGTCAAGTGCTTaGTTGATGCATGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKILSSA*LMHVPP
Trigger: TGGAGGTACATGCATCAAGCAAGCACTTGACAAGAT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATGGAATCTTGTCAAGTaGTTGCTTGATGCATGTACC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKWNLVK*LLDACT
Trigger: GGTACATGCATCAAGCAAGCACTTGACAAGATTCCA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATGGAATCTTGTCAAGTaGTTGCTTGATGCATGTACC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKWNLVK*LLDACT
Trigger: GGTACATGCATCAAGCAAGCACTTGACAAGATTCCA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTGGAATCTTGTCAAGTaGTTGCTTGATGCATGTACC +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNWNLVK*LLDACT
Trigger: GGTACATGCATCAAGCAAGCACTTGACAAGATTCCA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAAAGTGTGGTCAAGATTaGACCTGTGTGTGTGATCCT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTKCGQD*TCVCDP
Trigger: AGGATCACACACACAGGTGCAATCTTGACCACACTT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACGTCCTCCATTACACTaGAGAACTGTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKRPPLH*RTVKQG
Trigger: ACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCGTCCTCCATTACACTaGAGAACTGTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNRPPLH*RTVKQG
Trigger: ACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATATCTCTCCAGAGGTCTaGGAGGACTGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDISPEV*EDCPGS
Trigger: ACTCCCTGGACAGTCCTCCCAGACCTCTGGAGAGAT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATTTGGCTCAGCCGTTTaGAAAGCTTCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTFGSAV*KASSRS
Trigger: AGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAATCTCTATGGCCTGTaGAATCTTGTCAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKNLYGL*NLVKCL
Trigger: CAAGCACTTGACAAGATTCCACAGGCCATAGAGATT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTCAACAGTGGGTCTCTaGTTAAGCTTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSTVGL*LSFLVN
Trigger: ATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATCAACAGTGGGTCTCTaGTTAAGCTTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKSTVGL*LSFLVN
Trigger: ATTGACAAGAAAGCTTAATCAGAGACCCACTGTTGA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGAACATAATACTGAATaGCACTGTCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTEHNTE*HCHMSL
Trigger: GAGGGACATGTGACAGTGTCATTCAGTATTATGTTC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTCGCTTGTTCTCCAATaGCCCGTCAAAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDSLVLQ*PVKAPS
Trigger: GCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACGTCCTCCATTACACTaGAGAACTGTAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTRPPLH*RTVKQG
Trigger: ACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAACTAAAATTACATTTTaGACCATAGTGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKTKITF*TIVAAC
Trigger: GCAGGCAGCCACTATGGTGCAAAATGTAATTTTAGT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR GCA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTTTGGCTCAGCCGTCTaGGGAAAAACACTAAAATTA +
Preference number: 4 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNFGSAV*GKTLKL
Trigger: TAATTTTAGTGTTTTTCCGCAGACGGCTGAGCCAAA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCGACTTGGGAGTGGGTaGTTCACTCTGTACAGATCG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDRLGSG*FTLYRS
Trigger: CGATCTGTACAGAGTGAACCACCCACTCCCAAGTCG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDSPTWE*VVHSVQ
Trigger: CTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTCATGCTGGAGGCTTaGAAGAGTGTGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDFMLEA*KSVAWP
Trigger: AGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTAGAAGAAAATCTCTATaGCCTGTGGAATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPRRKSL*PVESCQ
Trigger: TTGACAAGATTCCACAGGCCATAGAGATTTTCTTCT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCAGAAGAAAATCTCTATaGCCTGTGGAATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCRRKSL*PVESCQ
Trigger: TTGACAAGATTCCACAGGCCATAGAGATTTTCTTCT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACTTCCACGTAATCACTaGATCGTATCAGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKLPRNH*IVSEFF
Trigger: GAAAAATTCTGATACGATTCAGTGATTACGTGGAAG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACTTCCACGTAATCACTaGATCGTATCAGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLPRNH*IVSEFF
Trigger: GAAAAATTCTGATACGATTCAGTGATTACGTGGAAG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTGCTTTCAGCATCCTaGTCCATCATCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLLSAS*SIISSS
Trigger: GCTGCTGGAGATGATGGAGCAGGATGCTGAAAGCAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTCTTCACCACTGGATaGAGAAGGCATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDFFTTG*RRHLGC
Trigger: GCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCTGCTTCTTCACCACTaGATGCAGAAGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLLLHH*MQKASW
Trigger: CCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAAGAAGAAAATCTCTATaGCCTGTGGAATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HARCPSSITLQNCKTRLKRRKSL*PVESCQ
Trigger: TTGACAAGATTCCACAGGCCATAGAGATTTTCTTCT...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAAGAAGAAAATCTCTATaGCCTGTGGAATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKRRKSL*PVESCQ
Trigger: TTGACAAGATTCCACAGGCCATAGAGATTTTCTTCT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTACTTTCTCTTCCTTaGAAACTGTCCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLLSLP*KLSWRC
Trigger: GCACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDFISIC*RISCLS
Trigger: AGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAAGAAGAAAATCTCTATaGCCTGTGGAATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTRRKSL*PVESCQ
Trigger: TTGACAAGATTCCACAGGCCATAGAGATTTTCTTCT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDCQVLA*CMYLHF
Trigger: GAAATGGAGGTACATGCATCAAGCAAGCACTTGACA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCTTCATCAGTCCTTCTaGGGAAAATGTTCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLHQSF*GKCSGL
Trigger: AAGACCGGAACATTTTCCCCAGAAGGACTGATGAAG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTTGGCTCAGCCGTTTaGAAAGCTTCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDFGSAV*KASSRS
Trigger: AGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAGCGCTGACGTTGTCTaGTTCAGTTTTTCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDSADVV*FSFSFF
Trigger: GAAAAACGAAAAACTGAAGCAGACAACGTCAGCGCT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR GCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATATAGTCCTGCGCTTTTaGTACTTCCACGTAATCACT +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDIVLRF*YFHVIT
Trigger: AGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTAT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCTGATAGAGTTATGTTaGGTCTTAACTGACCCCAAC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLIELC*VLTDPN
Trigger: GTTGGGGTCAGTTAAGACCCAACATAACTCTATCAG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR TCA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCTTCCACGTAATCACTaGATCGTATCAGAATTTTTC +
Preference number: 4 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLPRNH*IVSEFF
Trigger: GAAAAATTCTGATACGATTCAGTGATTACGTGGAAG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS GCA 90 bp GCGGAGGAGGTGGCCGAGGAGTCGGTGAGGACGCTGGGGTCACTCTaGGAGCGGCCCCGCGACACGAGGCAGCCGCTCCCGTCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: AEEVAEESVRTLGSL*ERPRDTRQPLPSSD
Trigger: GTCGGAGGACGGGAGCGGCTGCCTCGTGTCGCGGGGCCGCTCGCAGAGTGACCCCAGCGTCCTCACCGACTCCTCGGCCACCTCCTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371015.6
ENST00000434923.1
CDS CCA 90 bp GGCCATGGGCCCGGCCGGCGCGGGGGCAAGTTAGAGCGAGCCGCGTaGAATCAGAGCATCCGAGGCGGCCAAGGTCACCGGCGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GHGPGRRGGKLERAA*NQSIRGGQGHRRGG
Trigger: GCCCCCTCGCCGGTGACCTTGGCCGCCTCGGATGCTCTGATTCCACGCGGCTCGCTCTAACTTGCCCCCGCGCCGGCCGGGCCCATGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS CCA 90 bp GGCCATGGGCCCGGCCGGCGCGGGGGCAAGTTAGAGCGAGCCGCGTaGAATCAGAGCATCCGAGGCGGCCAAGGTCACCGGCGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: GHGPGRRGGKLERAA*NQSIRGGQGHRRGG
Trigger: TCCCCCTCGCCGGTGACCTTGGCCGCCTCGGATGCTCTGATTCCACGCGGCTCGCTCTAACTTGCCCCCGCGCCGGCCGGGCCCATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434923.1
CDS GCA 90 bp ACGCCGGGGCTGGCTTCAGGGCGGGGAGACAATAGCCTCGCCGGCTaGAGCCAGGCGCATCCCGGCGTGCGCGGCCTCGCTTTGTTATTT +
Preference number: 5 (lower is better)
Translates to: TPGLASGRGDNSLAG*SQAHPGVRGLALLF
Trigger: AAATAACAAAGCGAGGCCGCGCACGCCGGGATGCGCCTGGCTGCAGCCGGCGAGGCTATTGTCTCCCCGCCCTGAAGCCAGCCCCGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS CCA 90 bp GCCCTGTGCAGCTCCTCAATGACGCGGCTTGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGAGACCCCGTGGGTGTGGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ALCSSSMTRLGGRGR*TVVRCGDPVGVESW
Trigger: CCAGCTCTCCACACCCACGGGGTCTCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp GTGCTTCGTGGCCAGCGCCCTGTGCAGCTCCTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGACCGTGGTGAGATGCGGAGACCCCGT +
Preference number: 5 (lower is better)
Translates to: VLRGQRPVQLLNDAA*GKRPVDRGEMRRPR
Trigger: ACGGGGTCTCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCACGAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp CAGCTGAGGACAGTGGCTTGTCCAGGGAGACCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCTGGGCATCTTCTGAAGTCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: QLRTVACPGRPGPSQ*PRGFRAGHLLKSAS
Trigger: AGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGGTCTCCCTGGACAAGCCACTGTCCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAGAGCTCCTCTCGGCCTaGCCTGCCGGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPELLSA*PAGHLL
Trigger: AAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTC...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS TCA 90 bp CTGGTCCGTCCCAGTGGCCAAGGGGCTTCCGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTTGGGAGTGGGTGGTTCACTCTGTAC +
Preference number: 5 (lower is better)
Translates to: LVRPSGQGASGLGIF*SQRLRLGSGWFTLY
Trigger: GTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 90 bp TGTTCTCCAATGCCCCGTCAAAGCTCCAAGCCTCCTCCCTCTCCTTaGCCCGCTCCACGCTGGACGTTCTCGACAGACGGACATCCAGCC +
Preference number: 5 (lower is better)
Translates to: CSPMPRQSSKPPPSP*PAPRWTFSTDGHPA
Trigger: GGCTGGATGTCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGCTTGGAGCTTTGACGGGGCATTGGAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 90 bp TGGGTGTGGAGAGCTGGCCCCGGAGGGAAGGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTGTGGCTTGGCCTGCATCGTCCAAGT +
Preference number: 5 (lower is better)
Translates to: WVWRAGPGGKGRHSS*WRLGRVWLGLHRPS
Trigger: ACTTGGACGATGCAGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCGGGGCCAGCTCTCCACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS CCA 90 bp GACTGTCCAGGGAGTCAGCCCCAGCTAAGGCTTGGGAGAGCTCATTaGTGGTGGGCAGGAGGCTGCCAGCGTCTGCTTCTTCACCACTGG +
Preference number: 5 (lower is better)
Translates to: DCPGSQPQLRLGRAH*WWAGGCQRLLLHHW
Trigger: CCAGTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTGACTCCCTGGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp AGGGGCTTCCGGGCTGGGCATCTTCTGAAGTCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCTGTACAGATCGGGGTCCTCCATCGG +
Preference number: 5 (lower is better)
Translates to: RGFRAGHLLKSASPT*EWVVHSVQIGVLHR
Trigger: CCGATGGAGGACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp TGTCCAGGGAGTCAGCCCCAGCTAAGGCTTGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAGCGTCTGCTTCTTCACCACTGGATG +
Preference number: 5 (lower is better)
Translates to: CPGSQPQLRLGRAHW*WAGGCQRLLLHHWM
Trigger: CATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTGACTCCCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTGTGGTTTTGGAGCTaGCCTTGGGTGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLWFWS*PWVAEW
Trigger: CCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACTTCATGCTGGAGGCTaGGAAGAGTGTGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLHAGG*EECGLA
Trigger: GGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCAGCCTGCACATGCACGTaGCCCGTCCTCCATTACACT +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPACTCT*PVLHYT
Trigger: AGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGC...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS TCA 90 bp GGTGGCCAGTTTGCTGTTCCTCCTCACAGGGGGAGTTCGAATCCCTaGGACCAGATATTCAGGACGCGCCGGGGGCGTTTGGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: GGQFAVPPHRGSSNP*DQIFRTRRGRLVHL
Trigger: GAGATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCCCCTGTGAGGAGGAACAGCAAACTGGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 90 bp GGCTTGGGAGAGCTCATTGGTGGTGGGCAGGAGGCTGCCAGCGTCTaGTTCTTCACCACTGGATGCAGAAGGCATCTTGGCTGCATCGTC +
Preference number: 5 (lower is better)
Translates to: GLGELIGGGQEAASV*FFTTGCRRHLGCIV
Trigger: GACGATGCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp TTCCGGGCTGGGCATCTTCTGAAGTCAGCGTCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAGATCGGGGTCCTCCATCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: FRAGHLLKSASPTWE*VVHSVQIGVLHRGC
Trigger: GCAACCCCGATGGAGGACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp CATTGGTGGTGGGCAGGAGGCTGCCAGCGTCTGCTTCTTCACCACTaGATGCAGAAGGCATCTTGGCTGCATCGTCCAAGTGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: HWWWAGGCQRLLLHH*MQKASWLHRPSGQL
Trigger: CAGCTGCCCACTTGGACGATGCAGCCAAGATGCCTTCTGCATCCAGTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp AGGGAAGGAAGAAAGTCCAGGAAAGGGGTAGAGACGGGGGTGGAATaGTGGTGTCACCTGGCCTGGTCCTGGAAGGTGCCCAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: REGRKSRKGVETGVE*WCHLAWSWKVPRGG
Trigger: TCCTCCTCTGGGCACCTTCCAGGACCAGGCCAGGTGACACCACCATTCCACCCCCGTCTCTACCCCTTTCCTGGACTTTCTTCCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434923.1
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLAAVR*FSNAPS
Trigger: TGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTGGAAGAGTGTGGCTaGGCCTGCATCGTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLEECG*ACIVQV
Trigger: CACTTGGACGATGCAGGCCAAGCCACACTCTTCCAA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATCTTGTCAGTGTTTATaGCGTGCTTGGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPSCQCL*RAWGRG
Trigger: CCCCCTGCCCCAAGCACGCAATAAACACTGACAAGA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS TCA 90 bp ATCCAGAGCTGGGAGTCACTGGTTTCATCAGGTTTCTTGCTGGACTaGCTCCTTCCAGGGGGAGAGACAGGCGTGTCTTGCCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: IQSWESLVSSGFLLD*LLPGGETGVSCPAT
Trigger: GGTGGCGGGGCAAGACACGCCTGTCTCTCCCCCTGGAAGGAGTCAGTCCAGCAAGAAACCTGATGAAACCAGTGACTCCCAGCTCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS GCA 90 bp TCCATCATCTCCAGCAGCCCCTTCTTGATGAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTCTCCAGCGCTGACGTTGTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SIISSSPFLMSSSRP*LPAIFFSSADVVCF
Trigger: GAAGCAGACAACGTCAGCGCTGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTCATCAAGAAGGGGCTGCTGGAGATGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGCCTCCTCCCTCTCCTaGCCCCGCTCCACGCTGGAC +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGASSLS*PRSTLD
Trigger: GTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACGCGCCGGGGGCGTTaGGTCCATCTCATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKTRRGR*VHLIQS
Trigger: GCTCTGGATGAGATGGACCAAACGCCCCCGGCGCGT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS GCA 90 bp GGGGAGACAATAGCCTCGCCGGCTGCAGCCAGGCGCATCCCGGCGTaGGCGGCCTCGCTTTGTTATTTATTCGTGTTTATTCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: GETIASPAAARRIPA*AASLCYLFVFIPIL
Trigger: AAGAATGGGAATAAACACGAATAAATAACAAAGCGAGGCCGCGCACGCCGGGATGCGCCTGGCTGCAGCCGGCGAGGCTATTGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS GCA 90 bp CCACCTGTTTTCAGGCTTCTGGATCCAGAGATGCTGGGAGATTCATaGTTCCCAGCACTGCCTCCGTTGTCAGCACGGGAGACACCAGCC +
Preference number: 5 (lower is better)
Translates to: PPVFRLLDPEMLGDS*FPALPPLSARETPA
Trigger: GGCTGGTGTCTCCCGTGCTGACAACGGAGGCAGTGCTGGGAAGCATGAATCTCCCAGCATCTCTGGATCCAGAAGCCTGAAAACAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACCCAGGGTGGCCAGTTaGCTGTTCCTCCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKPRVAS*LFLLTG
Trigger: CCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGAGCTCCTCTCGGCCTaGCCTGCCGGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKELLSA*PAGHLL
Trigger: AAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGCCTCCTCCCTCTCCTaGCCCCGCTCCACGCTGGAC +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPASSLS*PRSTLD
Trigger: GTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPSSSSC*LGRFLS
Trigger: GCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGA...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGTCAGAGGCCTGGGAGTGGTGAGCCTGCACATGCACGTTGCCCGTCCTCCACTTTGGCTCAGCCGTTaGGAAAGCTTCATCTCGATC +
Preference number: 5 (lower is better)
Translates to: HVRGLGVVSLHMHVARPPLWLSR*ESFISI
Trigger: GATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG...TGGAGGACGGGCAACGTGCATGTGCAGGCTCACCACTCCCAGGCCTCTGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGCCTCCTCCCTCTCCTaGCCCCGCTCCACGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKASSLS*PRSTLD
Trigger: GTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCACGCGCCGGGGGCGTTaGGTCCATCTCATCTCCGTG +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVTRRGR*VHLISV
Trigger: CACGGAGATGAGATGGACCAAACGCCCCCGGCGCGT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS CCA 90 bp GTTCGAATCCCTGAGACCAGATATTCAGGACGCGCCGGGGGCGTTTaGTCCATCTCATCCAGAGCTGGGAGTCACTGGTTTCATCAGGTT +
Preference number: 5 (lower is better)
Translates to: VRIPETRYSGRAGGV*SISSRAGSHWFHQV
Trigger: AACCTGATGAAACCAGTGACTCCCAGCTCTGGATGAGATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGGGATTCGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCCCAGGGTGGCCAGTTaGCTGTTCCTCCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGPRVAS*LFLLTG
Trigger: CCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGAGCTCCTCTCGGCCTaGCCTGCCGGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCELLSA*PAGHLL
Trigger: AAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACTTCATGCTGGAGGCTaGGAAGAGTGTGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLHAGG*EECGLA
Trigger: GGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCCTCCTCCCTCTCCTaGCCCCGCTCCACGCTGGAC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTASSLS*PRSTLD
Trigger: GTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACGCGCCGGGGGCGTTaGGTCCATCTCATCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCTRRGR*VHLILR
Trigger: GCGCAAGATGAGATGGACCAAACGCCCCCGGCGCGT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359926.7
CDS-3UTR CAA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACGGGGCCTCCCGCCTCTaGTCAGCAAGCATGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNGASRL*SASMQP
Trigger: GGGCTGCATGCTTGCTGACAAGAGGCGGGAGGCCCC...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCCAGCACTGCCTCCGTaGTCAGCACGGGAGACACCA +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGPALPP*SARETP
Trigger: TGGTGTCTCCCGTGCTGACAACGGAGGCAGTGCTGG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 90 bp CTCCACGCTGGACGTTCTCGACAGACGGACATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCTTCCTTGAAAACTGTCCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LHAGRSRQTDIQPLL*RPFTFSSLKTVLAV
Trigger: CACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATGTCCGTCTGTCGAGAACGTCCAGCGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp AATCTCCACAAAGTCAGTCCTAGGAAGGACCTCTGGAGAGAAGAATaGCCACCGCAGATGCATCCTACACAGCCTGGGGCAGCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: NLHKVSPRKDLWREE*PPQMHPTQPGAAEQ
Trigger: TTGCTCTGCTGCCCCAGGCTGTGTAGGATGCATCTGCGGTGGCCATTCTTCTCTCCAGAGGTCCTTCCTAGGACTGACTTTGTGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTACGCGCCGGGGGCGTTaGGTCCATCTCATCTTATGG +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCTRRGR*VHLILW
Trigger: CCATAAGATGAGATGGACCAAACGCCCCCGGCGCGT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355648.8
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCCCAGGGTGGCCAGTTaGCTGTTCCTCCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCPRVAS*LFLLTG
Trigger: CCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTC +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGVSVSD*GVGGSL
Trigger: GAGTGAACCACCCACTCCCAAGTCGGAGACGCTGAC...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGATGCAGAAGGCATCTaGGCTGCATCGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKDAEGI*AASSKW
Trigger: CCACTTGGACGATGCAGCCAAGATGCCTTCTGCATC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGTTTTGGAGCTTGCCTaGGGTGGCGGAGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCVLELA*GGGVGS
Trigger: GCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAAC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAACGCGCCGGGGGCGTTaGGTCCATCTCATCTGGGTT +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGTRRGR*VHLIWV
Trigger: AACCCAGATGAGATGGACCAAACGCCCCCGGCGCGT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS GCA 90 bp CATCAGTCCTTCTGGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCTTCACGGCCAGGAGCTCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: HQSFWGKCSGLLVPV*LAGSLASRPGAPSC
Trigger: GCAAGAAGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAGGACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 90 bp TGTCTAAAGACGTCTAAGGGGCCTCCCGCCTCTTGTCAGCAAGCATaGAGCCCAGCTCGAGCGCTGAATAAAAACTGGGAATCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: CLKTSKGPPASCQQA*SPARALNKNWESLP
Trigger: TGGAAGAGATTCCCAGTTTTTATTCAGCGCTCGAGCTGGGCTGCATGCTTGCTGACAAGAGGCGGGAGGCCCCTTAGACGTCTTTAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACCCAGGGTGGCCAGTTaGCTGTTCCTCCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKPRVAS*LFLLTG
Trigger: CCCTGTGAGGAGGAACAGCAAACTGGCCACCCTGGG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGAGCTCCTCTCGGCCTaGCCTGCCGGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAELLSA*PAGHLL
Trigger: AAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAGGTCCTCCATCGGGGTaGCAAGTTTTGCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKGPPSG*QVLLSA
Trigger: TGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACC...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTC +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPVSVSD*GVGGSL
Trigger: GAGTGAACCACCCACTCCCAAGTCGGAGACGCTGAC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGTTTTGGAGCTTGCCTaGGGTGGCGGAGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKVLELA*GGGVGS
Trigger: GCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAAC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTTTGTGGTTTTGGAGCTaGCCTTGGGTGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCLWFWS*PWVAEW
Trigger: CCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAA...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTTGTGGTTTTGGAGCTaGCCTTGGGTGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLWFWS*PWVAEW
Trigger: CCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTGTGGTTTTGGAGCTaGCCTTGGGTGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLWFWS*PWVAEW
Trigger: CCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTGCCTGCACATGCACGTaGCCCGTCCTCCATTACACT +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCACTCT*PVLHYT
Trigger: AGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGC...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCGCCTGCACATGCACGTaGCCCGTCCTCCATTACACT +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVACTCT*PVLHYT
Trigger: AGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGC...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTGGTCCATCTCATCTaGCGCAGGATCTCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLVHLI*RRISGG
Trigger: GCCGCCCGAGATCCTGCGCAAGATGAGATGGACCAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359926.7
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGCAGCAGAGCAAGGCTaGGGCCCCATGAGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPAAEQG*GPMSQN
Trigger: ATTCTGGCTCATGGGGCCCAAGCCTTGCTCTGCTGC...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAACGCGCCGGGGGCGTTaGGTCCATCTCATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTTRRGR*VHLIQS
Trigger: GCTCTGGATGAGATGGACCAAACGCCCCCGGCGCGT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTCCACGGCAGGTCTTaGGCTCAGCCGTCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCFHGRS*AQPSAE
Trigger: TTCCGCAGACGGCTGAGCCAAAGACCTGCCGTGGAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 90 bp GCAGGTCTTCATTTTTCTGATCTGTCGCCCAAACCTTGCCTGGTCTaGACTGTTCACCGGAGCAGTGTGTTTAAGCAGCGAGGAGATCTG +
Preference number: 5 (lower is better)
Translates to: AGLHFSDLSPKPCLV*TVHRSSVFKQRGDL
Trigger: CAGATCTCCTCGCTGCTTAAACACACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATGAAGACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 90 bp CATGTGCAGGTCTTCATTTTTCTGATCTGTCGCCCAAACCTTGCCTaGTCTGGACTGTTCACCGGAGCAGTGTGTTTAAGCAGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: HVQVFIFLICRPNLA*SGLFTGAVCLSSEE
Trigger: CTCCTCGCTGCTTAAACACACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATGAAGACCTGCACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGAGCTCCTCTCGGCCTaGCCTGCCGGCCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTELLSA*PAGHLL
Trigger: AAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTC +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKVSVSD*GVGGSL
Trigger: GAGTGAACCACCCACTCCCAAGTCGGAGACGCTGAC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTC +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTAVSVSD*GVGGSL
Trigger: GAGTGAACCACCCACTCCCAAGTCGGAGACGCTGAC...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGACTTCATGCTGGAGGCTaGGAAGAGTGTGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLHAGG*EECGLA
Trigger: GGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAG...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAACTAGTTCCTGTTTGCTaGGCCGGTTCCTTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLVPVC*AGSLAS
Trigger: TGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAG...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGCCTGCACATGCACGTaGCCCGTCCTCCATTACACT +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGACTCT*PVLHYT
Trigger: AGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAGCAGCAGAGCAAGGCTaGGGCCCCATGAGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKAAEQG*GPMSQN
Trigger: ATTCTGGCTCATGGGGCCCAAGCCTTGCTCTGCTGC...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACGGGAGACACCAGCCTaGGGAGCACTGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTARETPA*GALISP
Trigger: AGGAGAGATCAGTGCTCCCAAGGCTGGTGTCTCCCG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS GCA 90 bp GCAGGTCTTTGGCTCAGCCGTTTGGAAAGCTTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCTTCATCAGTCCTTCTGGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: AGLWLSRLESFISIC*RISCLSSSVLLGKM
Trigger: CATTTTCCCCAGAAGGACTGATGAAGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAGACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 90 bp TCCACATGTGCAGGTCTTCATTTTTCTGATCTGTCGCCCAAACCTTaGCTGGTCTGGACTGTTCACCGGAGCAGTGTGTTTAAGCAGCGA +
Preference number: 5 (lower is better)
Translates to: STCAGLHFSDLSPKP*LVWTVHRSSVFKQR
Trigger: TCGCTGCTTAAACACACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATGAAGACCTGCACATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTCGGGGTTGCAAGTTTaGCTTTCAGCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVSGLQV*LSASCS
Trigger: GGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTCGGGGTTGCAAGTTTaGCTTTCAGCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSGLQV*LSASCS
Trigger: GGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTVSVSD*GVGGSL
Trigger: GAGTGAACCACCCACTCCCAAGTCGGAGACGCTGAC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACTTCATGCTGGAGGCTaGGAAGAGTGTGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKLHAGG*EECGLA
Trigger: GGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLAAVR*FSNAPS
Trigger: TGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTCCACGGCAGGTCTTaGGCTCAGCCGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCFHGRS*AQPFGK
Trigger: CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTTCCACGGCAGGTCTTaGGCTCAGCCGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPFHGRS*AQPFGK
Trigger: CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTCTGTCGCCCAAACCTaGCCTGGTCTGGACTGTTCA +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCSVAQT*PGLDCS
Trigger: TGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTCTCCAGCGCTGACGTaGTCTGCTTCAGTTTTTCGT +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVSPALT*SASVFR
Trigger: ACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTCTCCAGCGCTGACGTaGTCTGCTTCAGTTTTTCGT +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSPALT*SASVFR
Trigger: ACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCGGGGTTGCAAGTTTaGCTTTCAGCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSGLQV*LSASCS
Trigger: GGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATCGGGGTTGCAAGTTTaGCTTTCAGCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGSGLQV*LSASCS
Trigger: GGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTCGGGGTTGCAAGTTTaGCTTTCAGCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCSGLQV*LSASCS
Trigger: GGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCGGTCCTCCATCGGGGTaGCAAGTTTTGCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCGPPSG*QVLLSA
Trigger: TGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACC...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGATGCAGAAGGCATCTaGGCTGCATCGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKDAEGI*AASSKW
Trigger: CCACTTGGACGATGCAGCCAAGATGCCTTCTGCATC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACTTCATGCTGGAGGCTaGGAAGAGTGTGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLHAGG*EECGLA
Trigger: GGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCATCCAGCCGCTTCTTaGGAGACCCTTTACTTTCTC +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVHPAAS*ETLYFL
Trigger: GAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCATCCAGCCGCTTCTTaGGAGACCCTTTACTTTCTC +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGHPAAS*ETLYFL
Trigger: GAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLAAVR*FSNAPS
Trigger: TGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALAAVR*FSNAPS
Trigger: TGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCA +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKLAAVR*FSNAPS
Trigger: TGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGSSSSC*LGRFLS
Trigger: GCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCCTTTGGCTCAGCCGTTaGGAAAGCTTCATCTCGATC +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLWLSR*ESFISI
Trigger: GATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATTCCACGGCAGGTCTTaGGCTCAGCCGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKFHGRS*AQPFGK
Trigger: CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATTCCACGGCAGGTCTTaGGCTCAGCCGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKFHGRS*AQPFGK
Trigger: CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAATCTTGTCAAGTGCTaGCTTGATGCATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKNLVKC*LDACTS
Trigger: GGAGGTACATGCATCAAGCAAGCACTTGACAAGATT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAAAAGTGAACCTTTGGTaGTTGCCTCTTGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKKVNLW*LPLAGK
Trigger: TTTGCCAGCAAGAGGCAACAACCAAAGGTTCACTTT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCTCCAGCGCTGACGTaGTCTGCTTCAGTTTTTCGT +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSPALT*SASVFR
Trigger: ACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATCGGGGTTGCAAGTTTaGCTTTCAGCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKSGLQV*LSASCS
Trigger: GGAGCAGGATGCTGAAAGCAAAACTTGCAACCCCGA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGTCCTCCATCGGGGTaGCAAGTTTTGCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKGPPSG*QVLLSA
Trigger: TGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACC...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGATGCAGAAGGCATCTaGGCTGCATCGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTDAEGI*AASSKW
Trigger: CCACTTGGACGATGCAGCCAAGATGCCTTCTGCATC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTA +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKMIRFS*FSSDSL
Trigger: TAAGGAATCTGAGGAGAACAAGGAGAACCTGATCAT...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCTAGTTCCTGTTTGCTaGGCCGGTTCCTTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPLVPVC*AGSLAS
Trigger: TGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPSSSSC*LGRFLS
Trigger: GCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTCTTTGGCTCAGCCGTTaGGAAAGCTTCATCTCGATC +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPLWLSR*ESFISI
Trigger: GATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATTCCACGGCAGGTCTTaGGCTCAGCCGTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTFHGRS*AQPFGK
Trigger: CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCATAGTCCTGCGCTTTaGCTACTTCCACGTAATCAC +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCHSPAL*LLPRNH
Trigger: GTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCCATAGTCCTGCGCTTTaGCTACTTCCACGTAATCAC +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGHSPAL*LLPRNH
Trigger: GTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTCTCCAGCGCTGACGTaGTCTGCTTCAGTTTTTCGT +
Preference number: 5 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSPALT*SASVFR
Trigger: ACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATCTCCAGCGCTGACGTaGTCTGCTTCAGTTTTTCGT +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKSPALT*SASVFR
Trigger: ACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGGTCCTCCATCGGGGTaGCAAGTTTTGCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTGPPSG*QVLLSA
Trigger: TGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGTTTTGGAGCTTGCCTaGGGTGGCGGAGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDVLELA*GGGVGS
Trigger: GCTGCCCACTCCGCCACCCAAGGCAAGCTCCAAAAC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTTACTTTCTCTTCCTaGAAAACTGTCCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVFTFSS*KTVLAV
Trigger: CACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACTAGTTCCTGTTTGCTaGGCCGGTTCCTTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKLVPVC*AGSLAS
Trigger: TGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACTAGTTCCTGTTTGCTaGGCCGGTTCCTTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALVPVC*AGSLAS
Trigger: TGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACTCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNSSSSC*LGRFLS
Trigger: GCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGA...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCATCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTASSSSC*LGRFLS
Trigger: GCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGA...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACTTTGGCTCAGCCGTTaGGAAAGCTTCATCTCGATC +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLWLSR*ESFISI
Trigger: GATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCACTTTGGCTCAGCCGTTaGGAAAGCTTCATCTCGATC +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTALWLSR*ESFISI
Trigger: GATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCATAGTCCTGCGCTTTaGCTACTTCCACGTAATCAC +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCHSPAL*LLPRNH
Trigger: GTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTGAGCCTGCACATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAATTAATTCTTTACGAATaGCTGCCTTATCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GEPAHARCPSSITLQNCKLILYE*LPYLLL
Trigger: CAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAA...TTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAGATCGCCTCCCAAAATaGGAAGGAGAGAAAGTGAAC +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGDRLPK*EGEKVN
Trigger: GTTCACTTTCTCTCCTTCCAATTTTGGGAGGCGATC...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATCTCCAGCGCTGACGTaGTCTGCTTCAGTTTTTCGT +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTSPALT*SASVFR
Trigger: ACGAAAAACTGAAGCAGACAACGTCAGCGCTGGAGA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTC +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDVSVSD*GVGGSL
Trigger: GAGTGAACCACCCACTCCCAAGTCGGAGACGCTGAC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTTTACTTTCTCTTCCTaGAAAACTGTCCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPFTFSS*KTVLAV
Trigger: CACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATTTACTTTCTCTTCCTaGAAAACTGTCCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGFTFSS*KTVLAV
Trigger: CACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACATCCAGCCGCTTCTTaGGAGACCCTTTACTTTCTC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTHPAAS*ETLYFL
Trigger: GAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTA +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVMIRFS*FSSDSL
Trigger: TAAGGAATCTGAGGAGAACAAGGAGAACCTGATCAT...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTA +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCMIRFS*FSSDSL
Trigger: TAAGGAATCTGAGGAGAACAAGGAGAACCTGATCAT...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACCATAGTCCTGCGCTTTaGCTACTTCCACGTAATCAC +
Preference number: 5 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNHSPAL*LLPRNH
Trigger: GTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACATAGTCCTGCGCTTTaGCTACTTCCACGTAATCAC +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKHSPAL*LLPRNH
Trigger: GTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp GCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCTTGTCAAGTGCTTGCTaGATGCATGTACCTCCATTT +
Preference number: 5 (lower is better)
Translates to: ARCPSSITLQNCKTRLKGLSSAC*MHVPPF
Trigger: AAATGGAGGTACATGCATCAAGCAAGCACTTGACAA...GCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTAATCTTGTCAAGTGCTaGCTTGATGCATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPNLVKC*LDACTS
Trigger: GGAGGTACATGCATCAAGCAAGCACTTGACAAGATT...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAAATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS TCA 90 bp GGCAGTGTTCCAGAAATAATGGAGTCGTTCAGCGCCTCCTCGTCCTaGTACAAAAGCAAGTCGTCTTTGAGTTCAGAATTTATGATCAGG +
Preference number: 5 (lower is better)
Translates to: GSVPEIMESFSASSS*YKSKSSLSSEFMIR
Trigger: CCTGATCATAAATTCTGAACTCAAAGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCTGAACGACTCCATTATTTCTGGAACACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 90 bp AAAATTGGAAGGAGAGAAAGTGAACCTTTGGTTGTTGCCTCTTGCTaGCAAAATCAAGTCAGACTTCCAGGTGACAGTCAAAGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: KIGRRESEPLVVASC*QNQVRLPGDSQSSP
Trigger: GGGAGAGCTTTGACTGTCACCTGGAAGTCTGACTTGATTTTGCCAGCAAGAGGCAACAACCAAAGGTTCACTTTCTCTCCTTCCAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTGTGGTTTTGGAGCTaGCCTTGGGTGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLWFWS*PWVAEW
Trigger: CCACTCCGCCACCCAAGGCAAGCTCCAAAACCACAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTA +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCMIRFS*FSSDSL
Trigger: TAAGGAATCTGAGGAGAACAAGGAGAACCTGATCAT...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGAATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTA +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGMIRFS*FSSDSL
Trigger: TAAGGAATCTGAGGAGAACAAGGAGAACCTGATCAT...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACACATAGTCCTGCGCTTTaGCTACTTCCACGTAATCAC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTHSPAL*LLPRNH
Trigger: GTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAGGTAGGGTAGTCTTAATTCTTTACGAATaGCTGCCTTATCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CTCVCDPTLLTNTAGRVVLILYE*LPYLLL
Trigger: CAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAA...GACTACCCTACCTGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTTGGGTCTTAACTGACCCCAACAGTTCACACTCCTCAGACACCAAAGAAGGATTGTCAAGTGCTTGCTaGATGCATGTACCTCCATTT +
Preference number: 5 (lower is better)
Translates to: CWVLTDPNSSHSSDTKEGLSSAC*MHVPPF
Trigger: AAATGGAGGTACATGCATCAAGCAAGCACTTGACAA...TCCTTCTTTGGTGTCTGAGGAGTGTGAACTGTTGGGGTCAGTTAAGACCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTTTGTCAAGTGCTTGCTaGATGCATGTACCTCCATTT +
Preference number: 5 (lower is better)
Translates to: KCVLWLLLLQVSVVKIAPLSSAC*MHVPPF
Trigger: AAATGGAGGTACATGCATCAAGCAAGCACTTGACAA...AGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp TGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGCAAATCTTGTCAAGTGCTaGCTTGATGCATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: CGQDCTCVCDPTLLTNTANLVKC*LDACTS
Trigger: GGAGGTACATGCATCAAGCAAGCACTTGACAAGATT...TGCTGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp GGTAAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACAATCTTGTCAAGTGCTaGCTTGATGCATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: GKCGQDCTCVCDPTLLTNNLVKC*LDACTS
Trigger: GGAGGTACATGCATCAAGCAAGCACTTGACAAGATT...GTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGTGAACCTTTGGTTGTaGCCTCTTGCTGGCAAAATC +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTVNLWL*PLAGKI
Trigger: GATTTTGCCAGCAAGAGGCAACAACCAAAGGTTCAC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGATGCAGAAGGCATCTaGGCTGCATCGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDDAEGI*AASSKW
Trigger: CCACTTGGACGATGCAGCCAAGATGCCTTCTGCATC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATTTACTTTCTCTTCCTaGAAAACTGTCCTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTFTFSS*KTVLAV
Trigger: CACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp GTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCACCTGTGTGTCTTGTCAATCTTTGCTaGATTTCTCTTCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: VLWLLLLQVSVVKIAPVCLVNLC*ISLLSS
Trigger: GGAAGAAAGAAGAGAAATCAAGCAAAGATTGACAAG...ACACACAGGTGCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCTTAATTCTTTACGAATaGCTGCCTTATCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLILYE*LPYLLL
Trigger: CAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAA...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAATTGTCAAGTGCTTGCTaGATGCATGTACCTCCATTT +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLSSAC*MHVPPF
Trigger: AAATGGAGGTACATGCATCAAGCAAGCACTTGACAA...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACAGTGCGCGGCCTCGCTTaGTTATTTATTCGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTVRGLA*LFIRVY
Trigger: ATAAACACGAATAAATAACAAAGCGAGGCCGCGCAC...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATGGTCCTCCATCGGGGTaGCAAGTTTTGCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDGPPSG*QVLLSA
Trigger: TGCTGAAAGCAAAACTTGCAACCCCGATGGAGGACC...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGGAAGTGTGTCCTCTGGTTACTCCTCTTGCAGGTAAGTGTGGTCAAGATTGCCTTGTCAATCTTTGCTaGATTTCTCTTCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: KEVCPLVTPLAGKCGQDCLVNLC*ISLLSS
Trigger: GGAAGAAAGAAGAGAAATCAAGCAAAGATTGACAAG...GCAATCTTGACCACACTTACCTGCAAGAGGAGTAACCAGAGGACACACTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp CGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAATTAATTCTTTACGAATaGCTGCCTTATCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RCPSSITLQNCKTRLKGKLILYE*LPYLLL
Trigger: CAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAA...TTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp AAGTGTGGTCAAGATTGCACCTGTGTGTGTGATCCTACTCTTCTCACAAACACATTGTCAAGTGCTTGCTaGATGCATGTACCTCCATTT +
Preference number: 5 (lower is better)
Translates to: KCGQDCTCVCDPTLLTNTLSSAC*MHVPPF
Trigger: AAATGGAGGTACATGCATCAAGCAAGCACTTGACAA...TGTGTTTGTGAGAAGAGTAGGATCACACACACAGGTGCAATCTTGACCACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCATCCAGCCGCTTCTTaGGAGACCCTTTACTTTCTC +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDHPAAS*ETLYFL
Trigger: GAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATCTTTGGCTCAGCCGTTaGGAAAGCTTCATCTCGATC +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLWLSR*ESFISI
Trigger: GATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS-3UTR CAA 90 bp CATGCACGTTGCCCGTCCTCCATTACACTGCAGAACTGTAAAACAAGGTTGAAACTTGTCAATCTTTGCTaGATTTCTCTTCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HARCPSSITLQNCKTRLKLVNLC*ISLLSS
Trigger: GGAAGAAAGAAGAGAAATCAAGCAAAGATTGACAAG...TTTCAACCTTGTTTTACAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATATGGCCTGTGGAATCTaGTCAAGTGCTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDMACGI*SSACLM
Trigger: CATCAAGCAAGCACTTGACAAGATTCCACAGGCCAT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAGAGAAAGTGAACCTTaGGTTGTTGCCTCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDRESEP*VVASCW
Trigger: CCAGCAAGAGGCAACAACCAAAGGTTCACTTTCTCT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATAATCTTGTCAAGTGCTaGCTTGATGCATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDNLVKC*LDACTS
Trigger: GGAGGTACATGCATCAAGCAAGCACTTGACAAGATT...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTGTCAAGTGCTTGCTaGATGCATGTACCTCCATTT +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLSSAC*MHVPPF
Trigger: AAATGGAGGTACATGCATCAAGCAAGCACTTGACAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS-3UTR CAA 90 bp ACACTGCAGAACTGTAAAACAAGGTTGAAAGGCAAACAACAGTTTTCTTCTGATTTAATTCTTTACGAATaGCTGCCTTATCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TLQNCKTRLKGKQQFSSDLILYE*LPYLLL
Trigger: CAGCAGCAGATAAGGCAGCAATTCGTAAAGAATTAA...ATCAGAAGAAAACTGTTGTTTGCCTTTCAACCTTGTTTTACAGTTCTGCAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5
CDS GCA 72 bp GTGGCCGAGGAGTCGGTGAGGACGCTGGGGTCACTCTaGGAGCGGCCCCGCGACACGAGGCAGCCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: VAEESVRTLGSL*ERPRDTRQPLP
Trigger: CGGGAGCGGCTGCCTCGTGTCGCGGGGCCGCTCGCAGAGTGACCCCAGCGTCCTCACCGACTCCTCGGCCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371015.6
ENST00000434923.1
CDS GCA 72 bp CTGGCTTCAGGGCGGGGAGACAATAGCCTCGCCGGCTaGAGCCAGGCGCATCCCGGCGTGCGCGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: LASGRGDNSLAG*SQAHPGVRGLA
Trigger: AGCGAGGCCGCGCACGCCGGGATGCGCCTGGCTGCAGCCGGCGAGGCTATTGTCTCCCCGCCCTGAAGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS CCA 72 bp CCCGGCCGGCGCGGGGGCAAGTTAGAGCGAGCCGCGTaGAATCAGAGCATCCGAGGCGGCCAAGGTCACCGG +
Preference number: 6 (lower is better)
Translates to: PGRRGGKLERAA*NQSIRGGQGHR
Trigger: CCGGTGACCTTGGCCGCCTCGGATGCTCTGATTCCACGCGGCTCGCTCTAACTTGCCCCCGCGCCGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371015.6
ENST00000434923.1
CDS TCA 72 bp GGTGCTTCGTGGCCAGCGCCCTGTGCAGCTCCTCAATaGCGCGGCTTGGGGGAAGAGGCCGGTGGACCGTGG +
Preference number: 6 (lower is better)
Translates to: GASWPAPCAAPQ*RGLGEEAGGPW
Trigger: CCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCACGAAGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp GGCCAGCGCCCTGTGCAGCTCCTCAATGACGCGGCTTaGGGGAAGAGGCCGGTGGACCGTGGTGAGATGCGG +
Preference number: 6 (lower is better)
Translates to: GQRPVQLLNDAA*GKRPVDRGEMR
Trigger: CCGCATCTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp AGCTCCTCAATGACGCGGCTTGGGGGAAGAGGCCGGTaGACCGTGGTGAGATGCGGAGACCCCGTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: SSSMTRLGGRGR*TVVRCGDPVGV
Trigger: CACACCCACGGGGTCTCCGCATCTCACCACGGTCCACCGGCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 72 bp AAACTGTCCTGGCGGTGCTTCGTGGCCAGCGCCCTGTaGAGCTCCTCAATGACGCGGCTTGGGGGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: KLSWRCFVASAL*SSSMTRLGGRG
Trigger: GCCTCTTCCCCCAAGCCGCGTCATTGAGGAGCTGCACAGGGCGCTGGCCACGAAGCACCGCCAGGACAGTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp CCTGAGACCAGATATTCAGGACGCGCCGGGGGCGTTTaGTCCATCTCATCTGGGTTCTCCCCGGCGTCCGCG +
Preference number: 6 (lower is better)
Translates to: PETRYSGRAGGV*SISSGFSPASA
Trigger: CGCGGACGCCGGGGAGAACCCAGATGAGATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS TCA 72 bp CCCAGTGGCCAAGGGGCTTCCGGGCTGGGCATCTTCTaGAGTCAGCGTCTCCGACTTGGGAGTGGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: PSGQGASGLGIF*SQRLRLGSGWF
Trigger: GAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTTGGCCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp ACAGTGGCTTGTCCAGGGAGACCTGGTCCGTCCCAGTaGCCAAGGGGCTTCCGGGCTGGGCATCTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: TVACPGRPGPSQ*PRGFRAGHLLK
Trigger: CTTCAGAAGATGCCCAGCCCGGAAGCCCCTTGGCCACTGGGACGGACCAGGTCTCCCTGGACAAGCCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp TCCAAGCCTCCTCCCTCTCCTTGCCCCGCTCCACGCTaGACGTTCTCGACAGACGGACATCCAGCCGCTTCT +
Preference number: 6 (lower is better)
Translates to: SKPPPSPCPAPR*TFSTDGHPAAS
Trigger: AGAAGCGGCTGGATGTCCGTCTGTCGAGAACGTCCAGCGTGGAGCGGGGCAAGGAGAGGGAGGAGGCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp CCTGAGACCAGATATTCAGGACGCGCCGGGGGCGTTTaGTCCATCTCATCTTGCGCAGGATCTCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: PETRYSGRAGGV*SISSCAGSRAA
Trigger: CGCCGCCCGAGATCCTGCGCAAGATGAGATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359926.7
CDS CCA 72 bp GCTGGCCCCGGAGGGAAGGGTCGGCACTCTTCATGCTaGAGGCTTGGAAGAGTGTGGCTTGGCCTGCATCGT +
Preference number: 6 (lower is better)
Translates to: AGPGGKGRHSSC*RLGRVWLGLHR
Trigger: ACGATGCAGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCGGGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS GCA 72 bp AGAGCTGGCCCCGGAGGGAAGGGTCGGCACTCTTCATaGTGGAGGCTTGGAAGAGTGTGGCTTGGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: RAGPGGKGRHSS*WRLGRVWLGLH
Trigger: ATGCAGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCGGGGCCAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS CCA 72 bp CAGCCCCAGCTAAGGCTTGGGAGAGCTCATTGGTGGTaGGCAGGAGGCTGCCAGCGTCTGCTTCTTCACCAC +
Preference number: 6 (lower is better)
Translates to: QPQLRLGRAHWW*AGGCQRLLLHH
Trigger: GTGGTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 72 bp TCCAGCAGCCCCTTCTTGATGAGCTCCTCTCGGCCTTaGCTGCCGGCCATCTTCTTCTCCAGCGCTGACGTT +
Preference number: 6 (lower is better)
Translates to: SSSPFLMSSSRP*LPAIFFSSADV
Trigger: AACGTCAGCGCTGGAGAAGAAGATGGCCGGCAGGCAAGGCCGAGAGGAGCTCATCAAGAAGGGGCTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp AGTCAGCCCCAGCTAAGGCTTGGGAGAGCTCATTGGTaGTGGGCAGGAGGCTGCCAGCGTCTGCTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: SQPQLRLGRAHW*WAGGCQRLLLH
Trigger: GTGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACCAATGAGCTCTCCCAAGCCTTAGCTGGGGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp CGGAGGGAAGGGTCGGCACTCTTCATGCTGGAGGCTTaGAAGAGTGTGGCTTGGCCTGCATCGTCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: RREGSALFMLEA*KSVAWPASSKW
Trigger: CCACTTGGACGATGCAGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS CCA 72 bp AGAAAGTCCAGGAAAGGGGTAGAGACGGGGGTGGAATaGTGGTGTCACCTGGCCTGGTCCTGGAAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: RKSRKGVETGVE*WCHLAWSWKVP
Trigger: GGGCACCTTCCAGGACCAGGCCAGGTGACACCACCATTCCACCCCCGTCTCTACCCCTTTCCTGGACTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434923.1
CDS CAA 72 bp CCGGAGGGAAGGGTCGGCACTCTTCATGCTGGAGGCTaGGAAGAGTGTGGCTTGGCCTGCATCGTCCAAGTG +
Preference number: 6 (lower is better)
Translates to: PEGRVGTLHAGG*EECGLACIVQV
Trigger: CACTTGGACGATGCAGGCCAAGCCACACTCTTCCAAGCCTCCAGCATGAAGAGTGCCGACCCTTCCCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361300.4
CDS CAA 72 bp GCACTGCCTCCGTTGTCAGCACGGGAGACACCAGCCTaGGGAGCACTGATCTCTCCTTCCGGCTTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: ALPPLSARETPA*GALISPSGFLP
Trigger: AGGCAGAAAGCCGGAAGGAGAGATCAGTGCTCCCAAGGCTGGTGTCTCCCGTGCTGACAACGGAGGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CAA 90 bp AAGGGGCTTCCGGGCTGGGCATCTTCTGAAGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTCTGTACAGATCGGGGTCCTCCATCG +
Preference number: 6 (lower is better)
Translates to: KGLPGWASSEVSVSD*GVGGSLCTDRGPPS
Trigger: CGATGGAGGACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGGAAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 90 bp TGCTTCCCAGCACTGCCTCCGTTGTCAGCACGGGAGACACCAGCCTaGGGAGCACTGATCTCTCCTTCCGGCTTTCTGCCTGCTGAACTG +
Preference number: 6 (lower is better)
Translates to: CFPALPPLSARETPA*GALISPSGFLPAEL
Trigger: CAGTTCAGCAGGCAGAAAGCCGGAAGGAGAGATCAGTGCTCCCAAGGCTGGTGTCTCCCGTGCTGACAACGGAGGCAGTGCTGGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 72 bp CGGGCTGGGCATCTTCTGAAGTCAGCGTCTCCGACTTaGGAGTGGGTGGTTCACTCTGTACAGATCGGGGTC +
Preference number: 6 (lower is better)
Translates to: RAGHLLKSASPT*EWVVHSVQIGV
Trigger: GACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp CCGGGCTGGGCATCTTCTGAAGTCAGCGTCTCCGACTaGGGAGTGGGTGGTTCACTCTGTACAGATCGGGGT +
Preference number: 6 (lower is better)
Translates to: PGWASSEVSVSD*GVGGSLCTDRG
Trigger: ACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCCAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp GGACTGACTCCTTCCAGGGGGAGAGACAGGCGTGTCTaGCCCCGCCACCTACCAGCACAGAATCTCCACAAA +
Preference number: 6 (lower is better)
Translates to: GLTPSRGRDRRV*PRHLPAQNLHK
Trigger: TTTGTGGAGATTCTGTGCTGGTAGGTGGCGGGGCAAGACACGCCTGTCTCTCCCCCTGGAAGGAGTCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS CAA 72 bp ATGCTGGGAGATTCATGCTTCCCAGCACTGCCTCCGTaGTCAGCACGGGAGACACCAGCCTTGGGAGCACTG +
Preference number: 6 (lower is better)
Translates to: MLGDSCFPALPP*SARETPALGAL
Trigger: CAGTGCTCCCAAGGCTGGTGTCTCCCGTGCTGACAACGGAGGCAGTGCTGGGAAGCATGAATCTCCCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CAA 90 bp GATCCAGAGATGCTGGGAGATTCATGCTTCCCAGCACTGCCTCCGTaGTCAGCACGGGAGACACCAGCCTTGGGAGCACTGATCTCTCCT +
Preference number: 6 (lower is better)
Translates to: DPEMLGDSCFPALPP*SARETPALGALISP
Trigger: AGGAGAGATCAGTGCTCCCAAGGCTGGTGTCTCCCGTGCTGACAACGGAGGCAGTGCTGGGAAGCATGAATCTCCCAGCATCTCTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS TCA 72 bp TTTGCTGTTCCTCCTCACAGGGGGAGTTCGAATCCCTaGGACCAGATATTCAGGACGCGCCGGGGGCGTTTG +
Preference number: 6 (lower is better)
Translates to: FAVPPHRGSSNP*DQIFRTRRGRL
Trigger: CAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGGGATTCGAACTCCCCCTGTGAGGAGGAACAGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 72 bp ATAGCCTCGCCGGCTGCAGCCAGGCGCATCCCGGCGTaGGCGGCCTCGCTTTGTTATTTATTCGTGTTTATT +
Preference number: 6 (lower is better)
Translates to: IASPAAARRIPA*AASLCYLFVFI
Trigger: AATAAACACGAATAAATAACAAAGCGAGGCCGCGCACGCCGGGATGCGCCTGGCTGCAGCCGGCGAGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS GCA 72 bp ATCCAGAGATGCTGGGAGATTCATGCTTCCCAGCACTaGCTCCGTTGTCAGCACGGGAGACACCAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: IQRCWEIHASQH*LRCQHGRHQPW
Trigger: CCAAGGCTGGTGTCTCCCGTGCTGACAACGGAGGCAGTGCTGGGAAGCATGAATCTCCCAGCATCTCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 72 bp ACGCGCCGGGGGCGTTTGGTCCATCTCATCCAGAGCTaGGAGTCACTGGTTTCATCAGGTTTCTTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: TRRGRLVHLIQS*ESLVSSGFLLD
Trigger: GTCCAGCAAGAAACCTGATGAAACCAGTGACTCCCAGCTCTGGATGAGATGGACCAAACGCCCCCGGCGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS CCA 72 bp CCTGAGACCAGATATTCAGGACGCGCCGGGGGCGTTTaGTCCATCTCATCCAGAGCTGGGAGTCACTGGTTT +
Preference number: 6 (lower is better)
Translates to: PETRYSGRAGGV*SISSRAGSHWF
Trigger: AAACCAGTGACTCCCAGCTCTGGATGAGATGGACCAAACGCCCCCGGCGCGTCCTGAATATCTGGTCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS GCA 72 bp ACGTCTAAGGGGCCTCCCGCCTCTTGTCAGCAAGCATaGAGCCCAGCTCGAGCGCTGAATAAAAACTGGGAA +
Preference number: 6 (lower is better)
Translates to: TSKGPPASCQQA*SPARALNKNWE
Trigger: TTCCCAGTTTTTATTCAGCGCTCGAGCTGGGCTGCATGCTTGCTGACAAGAGGCGGGAGGCCCCTTAGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 72 bp GGGCATCTTCTGAAGTCAGCGTCTCCGACTTGGGAGTaGGTGGTTCACTCTGTACAGATCGGGGTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: GHLLKSASPTWE*VVHSVQIGVLH
Trigger: ATGGAGGACCCCGATCTGTACAGAGTGAACCACCCACTCCCAAGTCGGAGACGCTGACTTCAGAAGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS TCA 72 bp TGGGAGTCACTGGTTTCATCAGGTTTCTTGCTGGACTaGCTCCTTCCAGGGGGAGAGACAGGCGTGTCTTGC +
Preference number: 6 (lower is better)
Translates to: WESLVSSGFLLD*LLPGGETGVSC
Trigger: GCAAGACACGCCTGTCTCTCCCCCTGGAAGGAGTCAGTCCAGCAAGAAACCTGATGAAACCAGTGACTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS GCA 72 bp CTCAGATTCCTTAGCGGCAGTTCGCTTGTTCTCCAATaGCCCGTCAAAGCTCCAAGCCTCCTCCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: LRFLSGSSLVLQ*PVKAPSLLPLL
Trigger: AAGGAGAGGGAGGAGGCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAAGGAATCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 72 bp CACCATAGTGGCTGCCTGCAAATTCCACCTGGGGTCTaGAAGGATGAGAGGTGGCTGGCAAACCCCTATAGA +
Preference number: 6 (lower is better)
Translates to: HHSGCLQIPPGV*KDERWLANPYR
Trigger: TCTATAGGGGTTTGCCAGCCACCTCTCATCCTTGCAGACCCCAGGTGGAATTTGCAGGCAGCCACTATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 72 bp AAAGTCAGTCCTAGGAAGGACCTCTGGAGAGAAGAATaGCCACCGCAGATGCATCCTACACAGCCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: KVSPRKDLWREE*PPQMHPTQPGA
Trigger: TGCCCCAGGCTGTGTAGGATGCATCTGCGGTGGCCATTCTTCTCTCCAGAGGTCCTTCCTAGGACTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS CCA 72 bp AGAGCTGGGAGTCACTGGTTTCATCAGGTTTCTTGCTaGACTGACTCCTTCCAGGGGGAGAGACAGGCGTGT +
Preference number: 6 (lower is better)
Translates to: RAGSHWFHQVSC*TDSFQGERQAC
Trigger: ACACGCCTGTCTCTCCCCCTGGAAGGAGTCAGTCCAGCAAGAAACCTGATGAAACCAGTGACTCCCAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS CAA 90 bp GCTCCACGCTGGACGTTCTCGACAGACGGACATCCAGCCGCTTCTTaGGAGACCCTTTACTTTCTCTTCCTTGAAAACTGTCCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: APRWTFSTDGHPAAS*ETLYFLFLENCPGG
Trigger: ACCGCCAGGACAGTTTTCAAGGAAGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATGTCCGTCTGTCGAGAACGTCCAGCGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 90 bp ATCAGGTTCTCCTTGTTCTCCTCAGATTCCTTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCAAAGCTCCAAGCCTCCTCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: IRFSLFSSDSLAAVR*FSNAPSKLQASSLS
Trigger: GGAGAGGGAGGAGGCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAAGGAATCTGAGGAGAACAAGGAGAACCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp CACCACCTGTTTTCAGGCTTCTGGATCCAGAGATGCTaGGAGATTCATGCTTCCCAGCACTGCCTCCGTTGT +
Preference number: 6 (lower is better)
Translates to: HHLFSGFWIQRC*EIHASQHCLRC
Trigger: ACAACGGAGGCAGTGCTGGGAAGCATGAATCTCCCAGCATCTCTGGATCCAGAAGCCTGAAAACAGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CAA 72 bp TCCTTGTTCTCCTCAGATTCCTTAGCGGCAGTTCGCTaGTTCTCCAATGCCCCGTCAAAGCTCCAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLFSSDSLAAVR*FSNAPSKLQAS
Trigger: GGAGGCTTGGAGCTTTGACGGGGCATTGGAGAACAAGCGAACTGCCGCTAAGGAATCTGAGGAGAACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp TGGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTTGCTaGGCCGGTTCCTTAGCTTCACGGCCAGGAGCTCCT +
Preference number: 6 (lower is better)
Translates to: WGKCSGLLVPVC*AGSLASRPGAP
Trigger: AGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp CTTCTGGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGCTTCACGGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LLGKMFRSSSSC*LGRFLSFTARS
Trigger: GCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp TGCAGCCAGGCGCATCCCGGCGTGCGCGGCCTCGCTTaGTTATTTATTCGTGTTTATTCCCATTCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: CSQAHPGVRGLA*LFIRVYSHSSV
Trigger: GACTGAAGAATGGGAATAAACACGAATAAATAACAAAGCGAGGCCGCGCACGCCGGGATGCGCCTGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371015.6
CDS CAA 90 bp AGGTACTATGGGGAATCTTCCAGAGCACAGGCAACAGGGGAGGTCTaGAGACCAACCAGGAGTCAGGAGAATGAACTGATCCTCTCCCGT +
Preference number: 6 (lower is better)
Translates to: RYYGESSRAQATGEV*RPTRSQENELILSR
Trigger: ACGGGAGAGGATCAGTTCATTCTCCTGACTCCTGGTTGGTCTCAAGACCTCCCCTGTTGCCTGTGCTCTGGAAGATTCCCCATAGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541461.5
CDS GCA 72 bp TTCTGGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTTaGTTGGCCGGTTCCTTAGCTTCACGGCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: FWGKCSGLLVPV*LAGSLASRPGA
Trigger: AGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp GGCGTTTGGTCCATCTCATCCAGAGCTGGGAGTCACTaGTTTCATCAGGTTTCTTGCTGGACTGACTCCTTC +
Preference number: 6 (lower is better)
Translates to: GVWSISSRAGSH*FHQVSCWTDSF
Trigger: GAAGGAGTCAGTCCAGCAAGAAACCTGATGAAACCAGTGACTCCCAGCTCTGGATGAGATGGACCAAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361300.4
ENST00000395636.6
CDS CAA 90 bp TGTTTGCTTGGCCGGTTCCTTAGCTTCACGGCCAGGAGCTCCTTCTaGCATTTCCGTGGCAGTGTTCCAGAAATAATGGAGTCGTTCAGC +
Preference number: 6 (lower is better)
Translates to: CLLGRFLSFTARSSF*HFRGSVPEIMESFS
Trigger: GCTGAACGACTCCATTATTTCTGGAACACTGCCACGGAAATGCAAGAAGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 90 bp CAGTCCTTCTGGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTTGCTaGGCCGGTTCCTTAGCTTCACGGCCAGGAGCTCCTTCTTGCATT +
Preference number: 6 (lower is better)
Translates to: QSFWGKCSGLLVPVC*AGSLASRPGAPSCI
Trigger: AATGCAAGAAGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 90 bp TCATCAGTCCTTCTGGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTaGCTTGGCCGGTTCCTTAGCTTCACGGCCAGGAGCTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SSVLLGKMFRSSSSC*LGRFLSFTARSSFL
Trigger: CAAGAAGGAGCTCCTGGCCGTGAAGCTAAGGAACCGGCCAAGCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAGGACTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 90 bp AGGATGAGAGGTGGCTGGCAAACCCCTATAGATCGCCTCCCAAAATaGGAAGGAGAGAAAGTGAACCTTTGGTTGTTGCCTCTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RMRGGWQTPIDRLPK*EGEKVNLWLLPLAG
Trigger: GCCAGCAAGAGGCAACAACCAAAGGTTCACTTTCTCTCCTTCCAATTTTGGGAGGCGATCTATAGGGGTTTGCCAGCCACCTCTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS TCA 72 bp TTGCTCCAGCTCCACATGTGCAGGTCTTCATTTTTCTaGTCTGTCGCCCAAACCTTGCCTGGTCTGGACTGT +
Preference number: 6 (lower is better)
Translates to: LLQLHMCRSSFF*SVAQTLPGLDC
Trigger: ACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATGAAGACCTGCACATGTGGAGCTGGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS GCA 72 bp TGGCTCAGCCGTTTGGAAAGCTTCATCTCGATCTGCTaGCGGATCTCCTGTCTTTCTTCATCAGTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: WLSRLESFISIC*RISCLSSSVLL
Trigger: CAGAAGGACTGATGAAGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCTTTCCAAACGGCTGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS GCA 72 bp GCAGGTCTTCATTTTTCTGATCTGTCGCCCAAACCTTaGCTGGTCTGGACTGTTCACCGGAGCAGTGTGTTT +
Preference number: 6 (lower is better)
Translates to: AGLHFSDLSPKP*LVWTVHRSSVF
Trigger: AAACACACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATGAAGACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CCA 72 bp CATTTTTCTGATCTGTCGCCCAAACCTTGCCTGGTCTaGACTGTTCACCGGAGCAGTGTGTTTAAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: HFSDLSPKPCLV*TVHRSSVFKQR
Trigger: TCGCTGCTTAAACACACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS GCA 72 bp CTTTGGCTCAGCCGTTTGGAAAGCTTCATCTCGATCTaGTGCCGGATCTCCTGTCTTTCTTCATCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: LWLSRLESFISI*CRISCLSSSVL
Trigger: AAGGACTGATGAAGAAAGACAGGAGATCCGGCAGCAGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp GGACGTTCTCGACAGACGGACATCCAGCCGCTTCTTTaGAGACCCTTTACTTTCTCTTCCTTGAAAACTGTC +
Preference number: 6 (lower is better)
Translates to: GRSRQTDIQPLL*RPFTFSSLKTV
Trigger: GACAGTTTTCAAGGAAGAGAAAGTAAAGGGTCTCCAAAGAAGCGGCTGGATGTCCGTCTGTCGAGAACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp GCTGCCGGATCTCCTGTCTTTCTTCATCAGTCCTTCTaGGGAAAATGTTCCGGTCTTCTAGTTCCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: AAGSPVFLHQSF*GKCSGLLVPVC
Trigger: GCAAACAGGAACTAGAAGACCGGAACATTTTCCCCAGAAGGACTGATGAAGAAAGACAGGAGATCCGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CCA 72 bp GTCTTCATTTTTCTGATCTGTCGCCCAAACCTTGCCTaGTCTGGACTGTTCACCGGAGCAGTGTGTTTAAGC +
Preference number: 6 (lower is better)
Translates to: VFIFLICRPNLA*SGLFTGAVCLS
Trigger: GCTTAAACACACTGCTCCGGTGAACAGTCCAGACCAGGCAAGGTTTGGGCGACAGATCAGAAAAATGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CAA 72 bp GATATTTCTTCTCTCCAGCTCTTCCACGGCAGGTCTTaGGCTCAGCCGTTTGGAAAGCTTCATCTCGATCTG +
Preference number: 6 (lower is better)
Translates to: DISSLQLFHGRS*AQPFGKLHLDL
Trigger: CAGATCGAGATGAAGCTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAAGAGCTGGAGAGAAGAAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp CTTTCTCTCCCCAAACCCTGCCACCCTTCCCAGCCTTaGGTATCTATCATTCTACTGTCTACCTCCATGACA +
Preference number: 6 (lower is better)
Translates to: LSLPKPCHPSQP*VSIILLSTSMT
Trigger: TGTCATGGAGGTAGACAGTAGAATGATAGATACCAAAGGCTGGGAAGGGTGGCAGGGTTTGGGGAGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473657.1
CDS TCA 72 bp CCAGAAATAATGGAGTCGTTCAGCGCCTCCTCGTCCTaGTACAAAAGCAAGTCGTCTTTGAGTTCAGAATTT +
Preference number: 6 (lower is better)
Translates to: PEIMESFSASSS*YKSKSSLSSEF
Trigger: AAATTCTGAACTCAAAGACGACTTGCTTTTGTATCAGGACGAGGAGGCGCTGAACGACTCCATTATTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp TCGTCTTTGAGTTCAGAATTTATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTAGCGGCAGTTCGCTTG +
Preference number: 6 (lower is better)
Translates to: SSLSSEFMIRFS*FSSDSLAAVRL
Trigger: CAAGCGAACTGCCGCTAAGGAATCTGAGGAGAACAAGGAGAACCTGATCATAAATTCTGAACTCAAAGACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS CAA 72 bp CCAAAATTGGAAGGAGAGAAAGTGAACCTTTGGTTGTaGCCTCTTGCTGGCAAAATCAAGTCAGACTTCCAG +
Preference number: 6 (lower is better)
Translates to: PKLEGEKVNLWL*PLAGKIKSDFQ
Trigger: CTGGAAGTCTGACTTGATTTTGCCAGCAAGAGGCAACAACCAAAGGTTCACTTTCTCTCCTTCCAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492611.5
CDS CAA 90 bp AAAAGCAAGTCGTCTTTGAGTTCAGAATTTATGATCAGGTTCTCCTaGTTCTCCTCAGATTCCTTAGCGGCAGTTCGCTTGTTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: KSKSSLSSEFMIRFS*FSSDSLAAVRLFSN
Trigger: ATTGGAGAACAAGCGAACTGCCGCTAAGGAATCTGAGGAGAACAAGGAGAACCTGATCATAAATTCTGAACTCAAAGACGACTTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000541461.5
CDS TCA 72 bp TCTCTATGGCCTGTGGAATCTTGTCAAGTGCTTGCTTaGTGCATGTACCTCCATTTCATTACTTTTGTACTC +
Preference number: 6 (lower is better)
Translates to: SLWPVESCQVLA*CMYLHFITFVL
Trigger: GAGTACAAAAGTAATGAAATGGAGGTACATGCATCAAGCAAGCACTTGACAAGATTCCACAGGCCATAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000473657.1
ENST00000492611.5
ENST00000541461.5
CDS CAA 72 bp AACAGGGGAGTACAGATATCTCTTCAATGTACTGATTaGATTTCCTTTGCGTGTATACCTAGAAGTGGCATT +
Preference number: 6 (lower is better)
Translates to: NRGVQISLQCTD*ISFACIPRSGI
Trigger: AATGCCACTTCTAGGTATACACGCAAAGGAAATCAAATCAGTACATTGAAGAGATATCTGTACTCCCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473657.1
CDS TCA 72 bp CATAGTCCTGCGCTTTTGCTACTTCCACGTAATCACTaGATCGTATCAGAATTTTTCTGTCTCTTAATTCAT +
Preference number: 6 (lower is better)
Translates to: HSPALLLLPRNH*IVSEFFCLLIH
Trigger: ATGAATTAAGAGACAGAAAAATTCTGATACGATTCAGTGATTACGTGGAAGTAGCAAAAGCGCAGGACTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355648.8
ENST00000359926.7
ENST00000361300.4
ENST00000371015.6
ENST00000395636.6
ENST00000492611.5
ENST00000541461.5