RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHACTR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000112419

Ensembl transcript IDs: ENST00000305766.10, ENST00000367582.7, ENST00000367584.8, ENST00000397980.3, ENST00000402863.3, ENST00000420771.2, ENST00000427704.6, ENST00000440869.6, ENST00000451827.6, ENST00000536245.1, ENST00000542769.5, ENST00000545919.1

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCATCCTTCCTTTTGCTTGTTGGAGCCATCTGGGCCACACAGGTaGGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACC +
Preference number: 1 (lower is better)
Translates to: LHPSFCLLEPSGPHR*GALPSQAESHTSFT
Trigger: GGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR GCA 90 bp CGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGTTGGAGCCATCTGGGCCACACAGGT +
Preference number: 1 (lower is better)
Translates to: RCLLPSLCILGSKSH*ILPFACWSHLGHTG
Trigger: ACCTGTGTGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR CCA 90 bp GGCCAGTCCAGTGACGAATACCCTGCACGGACCAGGCACCAGAGATaGCACTGTTACGTAATGCAGGATGCGATTCTTGGATGTGAGAAG +
Preference number: 1 (lower is better)
Translates to: GQSSDEYPARTRHQR*HCYVMQDAILGCEK
Trigger: CTTCTCACATCCAAGAATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR CCA 90 bp CTATACAGCATATGCTTACTGGTTGGATTGCTGAAACGCTGGTGGTaGACAGAGGTGCCTATGCACGGAGGGTGGGCCAGACCTCTGCAT +
Preference number: 1 (lower is better)
Translates to: LYSICLLVGLLKRWW*TEVPMHGGWARPLH
Trigger: ATGCAGAGGTCTGGCCCACCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 90 bp TGGCCAAGGCTGCCCAGTAACCTCCTCCCTGAAGAACAGCTGCACTaGGAGAAAGGCTCGAAAAATGAAGGGAGAAAAACCATTCAGGGC +
Preference number: 1 (lower is better)
Translates to: WPRLPSNLLPEEQLH*EKGSKNEGRKTIQG
Trigger: GCCCTGAATGGTTTTTCTCCCTTCATTTTTCGAGCCTTTCTCTCAGTGCAGCTGTTCTTCAGGGAGGAGGTTACTGGGCAGCCTTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR GCA 90 bp TTGAGGGTACTCTACCTCTCTCCCCACCACCTCTTGGTCACTGCCTaGCTTTACAGTAGAGCCCAGTGCTACTTCTTTGAAACCTGGGTT +
Preference number: 1 (lower is better)
Translates to: LRVLYLSPHHLLVTA*LYSRAQCYFFETWV
Trigger: AACCCAGGTTTCAAAGAAGTAGCACTGGGCTCTACTGTAAAGGCAGGCAGTGACCAAGAGGTGGTGGGGAGAGAGGTAGAGTACCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 90 bp TATGTTGATAAGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTaGCGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTA +
Preference number: 1 (lower is better)
Translates to: YVDKGNTSFDVWPVQ*RIPCTDQAPEMALL
Trigger: TAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTTATCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR TCA 90 bp CACTTTTATTTTTCCTATACAGCATATGCTTACTGGTTGGATTGCTaGAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: HFYFSYTAYAYWLDC*NAGGGQRCLCTEGG
Trigger: CCCACCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTATAGGAAAAATAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 90 bp TACAGCAAAGACCTATCCAGCTCCAAATGCCAAGAGTACCCCCACTaGGAAACACAGACCAACAGTGCTTTGCTCATATGTGCAGCTGTG +
Preference number: 1 (lower is better)
Translates to: YSKDLSSSKCQEYPH*ETQTNSALLICAAV
Trigger: CACAGCTGCACATATGAGCAAAGCACTGTTGGTCTGTGTTTCTCAGTGGGGGTACTCTTGGCATTTGGAGCTGGATAGGTCTTTGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 90 bp AGTCAGCAGGGGCCTGGGATATTAAACATCTGGCAATGCATGGGATaGTTCTGTACAGCAAAGACCTATCCAGCTCCAAATGCCAAGAGT +
Preference number: 1 (lower is better)
Translates to: SQQGPGILNIWQCMG*FCTAKTYPAPNAKS
Trigger: ACTCTTGGCATTTGGAGCTGGATAGGTCTTTGCTGTACAGAATCATCCCATGCATTGCCAGATGTTTAATATCCCAGGCCCCTGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 90 bp TTCCCACACACTTTTATTTTTCCTATACAGCATATGCTTACTGGTTaGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGG +
Preference number: 1 (lower is better)
Translates to: FPHTFIFPIQHMLTG*IAETLVVDRGAYAR
Trigger: CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTATAGGAAAAATAAAAGTGTGTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 90 bp AAGCAGGTGATTCATTTGGAACTTATGGGATGCAGCATAACCAGGTaGAATCTAATGGTGATTTATTTCCAAAGACCACCAGGTTTGTTC +
Preference number: 1 (lower is better)
Translates to: KQVIHLELMGCSITR*NLMVIYFQRPPGLF
Trigger: GAACAAACCTGGTGGTCTTTGGAAATAAATCACCATTAGATTTCACCTGGTTATGCTGCATCCCATAAGTTCCAAATGAATCACCTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 90 bp CACATAACACAGGAAATTATCAGGCAAGCTGCCTTAAATGAATGCTaGCTACCAGAGAACTATTTTGTCAGACTGATTGGTAATGACCAT +
Preference number: 1 (lower is better)
Translates to: HITQEIIRQAALNEC*LPENYFVRLIGNDH
Trigger: ATGGTCATTACCAATCAGTCTGACAAAATAGTTCTCTGGTAGTCAGCATTCATTTAAGGCAGCTTGCCTGATAATTTCCTGTGTTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR GCA 90 bp AATCTAATGGTGATTTATTTCCAAAGACCACCAGGTTTGTTCAAGTaGATTGCTAGTCTGTGTTTGTGTTTAACCCATGCAACAATCCTC +
Preference number: 1 (lower is better)
Translates to: NLMVIYFQRPPGLFK*IASLCLCLTHATIL
Trigger: GAGGATTGTTGCATGGGTTAAACACAAACACAGACTAGCAATGCACTTGAACAAACCTGGTGGTCTTTGGAAATAAATCACCATTAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 90 bp AAAGCACTTGTGAAGAACAATGAAATGCAAGGTGGTATTTACATATaGTCATATGTATTTGGGAGCAGAAGTCATAGTGTGCCTGTGACT +
Preference number: 1 (lower is better)
Translates to: KALVKNNEMQGGIYI*SYVFGSRSHSVPVT
Trigger: AGTCACAGGCACACTATGACTTCTGCTCCCAAATACATATGACCATATGTAAATACCACCTTGCATTTCATTGTTCTTCACAAGTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 90 bp GTTTTTATTACAGGTGTCATGATTGCCAATACTGTCTTCTCTAGGTaGAGTATGGTTGCTTTGACTTTGGATCTAATCAAGATAGGGAAA +
Preference number: 1 (lower is better)
Translates to: VFITGVMIANTVFSR*SMVALTLDLIKIGK
Trigger: TTTCCCTATCTTGATTAGATCCAAAGTCAAAGCAACCATACTTCACCTAGAGAAGACAGTATTGGCAATCATGACACCTGTAATAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 90 bp TTTAATTTCATACCACCTACTCTGAGGAAGATTTCTTGCTCTGTTTaGAATTTGCAGCAAGGGGCACTTAAAAATAATAACAGACTGAAG +
Preference number: 1 (lower is better)
Translates to: FNFIPPTLRKISCSV*NLQQGALKNNNRLK
Trigger: CTTCAGTCTGTTATTATTTTTAAGTGCCCCTTGCTGCAAATTTCAAACAGAGCAAGAAATCTTCCTCAGAGTAGGTGGTATGAAATTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR CCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCTTGTTGGAGCCATCTaGGCCACACAGGTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSLVGAI*ATQVRS
Trigger: GCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR TCA 90 bp CTTACTGGTTGGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGGGCTTCCCCCAAAGATaGTCAGTCTCTGTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: LTGWIAETLVVDRGAYARGFPQR*SVSVSK
Trigger: TTTGGAAACAGAGACTGATCATCTTTGGGGGAAGCC...CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR CCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACTTGTTGGAGCCATCTaGGCCACACAGGTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARLVGAI*ATQVRS
Trigger: GCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR CCA 90 bp AGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATACCCTGCACGGACCAGGCACCAGAGATaGCACTGTTACGTAATGCAG +
Preference number: 2 (lower is better)
Translates to: RETLPLMSGQSSDEYPARTRHQR*HCYVMQ
Trigger: CTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGT...CCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTACTTCCCAGCCAAGCTaGGTCACACACTTCCTTCAC +
Preference number: 2 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTTSQPS*VTHFLH
Trigger: GTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGT...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR CAA 90 bp CACACACTTTTATTTTTCCTATACAGCATATGCTTACTGGTTGGATaGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGAGGG +
Preference number: 2 (lower is better)
Translates to: HTLLFFLYSICLLVG*LKRWWWTEVPMHGG
Trigger: CCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTATAGGAAAAATAAAAGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGGCTTCCCCCAAAGATaGTCAGTCTCTGTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTGFPQR*SVSVSK
Trigger: TTTGGAAACAGAGACTGATCATCTTTGGGGGAAGCC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR GCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCTGCATCCTTCCTTTTaGTTGTTGGAGCCATCTGGG +
Preference number: 2 (lower is better)
Translates to: KASDEEYPRCLLPSLCILLHPSF*LLEPSG
Trigger: CCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR CAA 90 bp AACTGTCAGGAACTTTTTATTATGTTGATAAGGGAAACACTTCCTTaGATGTCTGGCCAGTCCAGTGACGAATACCCTGCACGGACCAGG +
Preference number: 2 (lower is better)
Translates to: NCQELFIMLIRETLP*MSGQSSDEYPARTR
Trigger: CCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTTATCAACATAATAAAAAGTTCCTGACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR-3UTR GCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: KASDEEYPRCLLPSLCILGSKSH*ILPFAC
Trigger: ACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR CCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACCTTGTTGGAGCCATCTaGGCCACACAGGTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNLVGAI*ATQVRS
Trigger: GCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAG...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR CCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTACATCGCTGTGCATTCTaGGCAGCAAGAGTCACTGCA +
Preference number: 2 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVHRCAF*AARVTA
Trigger: TGCAGTGACTCTTGCTGCCCAGAATGCACAGCGATG...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR TCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTAGGCTTCCCCCAAAGATaGTCAGTCTCTGTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVGFPQR*SVSVSK
Trigger: TTTGGAAACAGAGACTGATCATCTTTGGGGGAAGCC...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR TCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTACTTCCCAGCCAAGCTaGGTCACACACTTCCTTCAC +
Preference number: 2 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISTSQPS*VTHFLH
Trigger: GTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGT...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR GCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAACTGCATCCTTCCTTTTaGTTGTTGGAGCCATCTGGG +
Preference number: 2 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKLHPSF*LLEPSG
Trigger: CCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAG...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR GCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTCTCTTACCATCGCTGTaGATTCTGGGCAGCAAGAGT +
Preference number: 2 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTLLPSL*ILGSKS
Trigger: ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAG...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 90 bp TTCCAAAGACCACCAGGTTTGTTCAAGTGCATTGCTAGTCTGTGTTaGTGTTTAACCCATGCAACAATCCTCATGACAGTAACAAGGATT +
Preference number: 2 (lower is better)
Translates to: FQRPPGLFKCIASLC*CLTHATILMTVTRI
Trigger: AATCCTTGTTACTGTCATGAGGATTGTTGCATGGGTTAAACACAAACACAGACTAGCAATGCACTTGAACAAACCTGGTGGTCTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR GCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKGSKSH*ILPFAC
Trigger: ACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCC...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 90 bp TGTACCAACATAATGGTGAAACAAGAGTATTCTCCGATCAAGTCTTaGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATA +
Preference number: 2 (lower is better)
Translates to: CTNIMVKQEYSPIKS*RNPHQEVKFLNPLI
Trigger: TATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTTGATCGGAGAATACTCTTGTTTCACCATTATGTTGGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTTTATTACAGGTGTCATaGTTGCCAATACTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTLLQVS*LPILSS
Trigger: AGAAGACAGTATTGGCAATCATGACACCTGTAATAA...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 90 bp AGATCTAGCCATTTCAAGAGGTCAAGGGACAATTCTGTAAATAAATaGCATCTAAGTAGTTCCTTACTACTCACAACATGCTCTAATAGT +
Preference number: 2 (lower is better)
Translates to: RSSHFKRSRDNSVNK*HLSSSLLLTTCSNS
Trigger: ACTATTAGAGCATGTTGTGAGTAGTAAGGAACTACTTAGATGCAATTTATTTACAGAATTGTCCCTTGACCTCTTGAAATGGCTAGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 72 bp CGCTGGTGGTGGACAGAGGTGCCTATGCACGGAGGGTaGGCCAGACCTCTGCATCCCTTTAGGGCCCCCAGG +
Preference number: 3 (lower is better)
Translates to: RWWWTEVPMHGG*ARPLHPFRAPR
Trigger: CCTGGGGGCCCTAAAGGGATGCAGAGGTCTGGCCCACCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 72 bp CCTTTAGGGCCCCCAGGTAGGAGACCTCTGGCTGGGTaGCCGGTGGGGATATGTCTCATCTCTGCTCTACTA +
Preference number: 3 (lower is better)
Translates to: PLGPPGRRPLAG*PVGICLISALL
Trigger: TAGTAGAGCAGAGATGAGACATATCCCCACCGGCCACCCAGCCAGAGGTCTCCTACCTGGGGGCCCTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 72 bp AGCATATGCTTACTGGTTGGATTGCTGAAACGCTGGTaGTGGACAGAGGTGCCTATGCACGGAGGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: SICLLVGLLKRW*WTEVPMHGGWA
Trigger: GGCCCACCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 72 bp TCCTTTTGCTTGTTGGAGCCATCTGGGCCACACAGGTaGGGAGCACTTCCCAGCCAAGCTGAGTCACACACT +
Preference number: 3 (lower is better)
Translates to: SFCLLEPSGPHR*GALPSQAESHT
Trigger: AGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAGCAAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR CCA 72 bp ATATGCTTACTGGTTGGATTGCTGAAACGCTGGTGGTaGACAGAGGTGCCTATGCACGGAGGGTGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: ICLLVGLLKRWW*TEVPMHGGWAR
Trigger: TCTGGCCCACCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 72 bp TGGGCCACACAGGTGAGGAGCACTTCCCAGCCAAGCTaGGTCACACACTTCCTTCACCACAAGTTAAACGGA +
Preference number: 3 (lower is better)
Translates to: WATQVRSTSQPS*VTHFLHHKLNG
Trigger: TCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACCTGTGTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR TCA 72 bp AAGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTaGCGAATACCCTGCACGGACCAGGCACCAGAGATG +
Preference number: 3 (lower is better)
Translates to: KGNTSFDVWPVQ*RIPCTDQAPEM
Trigger: CATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR CCA 72 bp TACAGCATATGCTTACTGGTTGGATTGCTGAAACGCTaGTGGTGGACAGAGGTGCCTATGCACGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: YSICLLVGLLKR*WWTEVPMHGGW
Trigger: CCACCCTCCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR GCA 72 bp CTCTACCTCTCTCCCCACCACCTCTTGGTCACTGCCTaGCTTTACAGTAGAGCCCAGTGCTACTTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: LYLSPHHLLVTA*LYSRAQCYFFE
Trigger: TTCAAAGAAGTAGCACTGGGCTCTACTGTAAAGGCAGGCAGTGACCAAGAGGTGGTGGGGAGAGAGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 72 bp AGTGACGAATACCCTGCACGGACCAGGCACCAGAGATaGCACTGTTACGTAATGCAGGATGCGATTCTTGGA +
Preference number: 3 (lower is better)
Translates to: SDEYPARTRHQR*HCYVMQDAILG
Trigger: TCCAAGAATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCCTTCCTTTTGCTTGTaGGAGCCATCTGGGCCACAC +
Preference number: 3 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSPSFCL*EPSGPH
Trigger: GTGTGGCCCAGATGGCTCCAACAAGCAAAAGGAAGG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCATCCTTCCTTTTGCTaGTTGGAGCCATCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGHPSFC*LEPSGP
Trigger: TGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCATCCTTCCTTTTGCTaGTTGGAGCCATCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTHPSFC*LEPSGP
Trigger: TGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCACTGCATCCTTCCTTTaGCTTGTTGGAGCCATCTGG +
Preference number: 3 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGTASFL*LVGAIW
Trigger: CCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAGT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR TCA 72 bp CTGCCCAGTAACCTCCTCCCTGAAGAACAGCTGCACTaGGAGAAAGGCTCGAAAAATGAAGGGAGAAAAACC +
Preference number: 3 (lower is better)
Translates to: LPSNLLPEEQLH*EKGSKNEGRKT
Trigger: GGTTTTTCTCCCTTCATTTTTCGAGCCTTTCTCTCAGTGCAGCTGTTCTTCAGGGAGGAGGTTACTGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCCTTCCTTTTGCTTGTaGGAGCCATCTGGGCCACAC +
Preference number: 3 (lower is better)
Translates to: KASDEEYPRCLLPSLCILPSFCL*EPSGPH
Trigger: GTGTGGCCCAGATGGCTCCAACAAGCAAAAGGAAGG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR-3UTR CAA 90 bp CTTACTGGTTGGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGTATGGTCATATGTATTaGGGAGCAGAAGTCATAGTG +
Preference number: 3 (lower is better)
Translates to: LTGWIAETLVVDRGAYARYGHMY*GAEVIV
Trigger: CACTATGACTTCTGCTCCCAAATACATATGACCATA...CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 72 bp GCACTGTTACGTAATGCAGGATGCGATTCTTGGATGTaGGAAGGCTGCCAGGGACAAACCACAGATGGATTT +
Preference number: 3 (lower is better)
Translates to: ALLRNAGCDSWM*EGCQGQTTDGF
Trigger: AAATCCATCTGTGGTTTGTCCCTGGCAGCCTTCTCACATCCAAGAATCGCATCCTGCATTACGTAACAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
3UTR TCA 72 bp GACCTATCCAGCTCCAAATGCCAAGAGTACCCCCACTaGGAAACACAGACCAACAGTGCTTTGCTCATATGT +
Preference number: 3 (lower is better)
Translates to: DLSSSKCQEYPH*ETQTNSALLIC
Trigger: ACATATGAGCAAAGCACTGTTGGTCTGTGTTTCTCAGTGGGGGTACTCTTGGCATTTGGAGCTGGATAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR TCA 72 bp GGGCCTGGGATATTAAACATCTGGCAATGCATGGGATaGTTCTGTACAGCAAAGACCTATCCAGCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: GPGILNIWQCMG*FCTAKTYPAPN
Trigger: ATTTGGAGCTGGATAGGTCTTTGCTGTACAGAATCATCCCATGCATTGCCAGATGTTTAATATCCCAGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 72 bp ACTTTTATTTTTCCTATACAGCATATGCTTACTGGTTaGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCC +
Preference number: 3 (lower is better)
Translates to: TFIFPIQHMLTG*IAETLVVDRGA
Trigger: GGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTATAGGAAAAATAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR CAA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTATCTCCGATCAAGTCTTaGAGGAATCCACATCAGGAG +
Preference number: 3 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVSPIKS*RNPHQE
Trigger: CTCCTGATGTGGATTCCTCAAAGACTTGATCGGAGA...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 72 bp GAAGCTTGCTACAGTTTTCTAGGGTCACATTACATCTaGCTTTATTCCCAGTCCTCTTATCCTGTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: EACYSFLGSHYI*LYSQSSYPVKA
Trigger: AGCCTTCACAGGATAAGAGGACTGGGAATAAAGTCAGATGTAATGTGACCCTAGAAAACTGTAGCAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 72 bp AGTAGAGCCCAGTGCTACTTCTTTGAAACCTGGGTTTaGACTAACTGGGCATGTACTTTCTCTAGAAAGATG +
Preference number: 3 (lower is better)
Translates to: SRAQCYFFETWV*TNWACTFSRKM
Trigger: CATCTTTCTAGAGAAAGTACATGCCCAGTTAGTTCAAACCCAGGTTTCAAAGAAGTAGCACTGGGCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR CAA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCATCCTTCCTTTTGCTaGTTGGAGCCATCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISHPSFC*LEPSGP
Trigger: TGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR CAA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACTCTCCGATCAAGTCTTaGAGGAATCCACATCAGGAG +
Preference number: 3 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHSPIKS*RNPHQE
Trigger: CTCCTGATGTGGATTCCTCAAAGACTTGATCGGAGA...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 72 bp ACTCATCTTGTTTTGTGTGTGACCATCACTGAAGTATaGACAACAGGCATGCAACCCACAGTTAATCCACAT +
Preference number: 3 (lower is better)
Translates to: THLVLCVTITEV*TTGMQPTVNPH
Trigger: ATGTGGATTAACTGTGGGTTGCATGCCTGTTGTTCATACTTCAGTGATGGTCACACACAAAACAAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR-3UTR CAA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTACTGCATCCTTCCTTTaGCTTGTTGGAGCCATCTGG +
Preference number: 3 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISTASFL*LVGAIW
Trigger: CCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAGT...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 72 bp ACAGGTGTCATGATTGCCAATACTGTCTTCTCTAGGTaGAGTATGGTTGCTTTGACTTTGGATCTAATCAAG +
Preference number: 3 (lower is better)
Translates to: TGVMIANTVFSR*SMVALTLDLIK
Trigger: CTTGATTAGATCCAAAGTCAAAGCAACCATACTTCACCTAGAGAAGACAGTATTGGCAATCATGACACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 72 bp CAGGAAATTATCAGGCAAGCTGCCTTAAATGAATGCTaGCTACCAGAGAACTATTTTGTCAGACTGATTGGT +
Preference number: 3 (lower is better)
Translates to: QEIIRQAALNEC*LPENYFVRLIG
Trigger: ACCAATCAGTCTGACAAAATAGTTCTCTGGTAGTCAGCATTCATTTAAGGCAGCTTGCCTGATAATTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR GCA 72 bp GTGATTTATTTCCAAAGACCACCAGGTTTGTTCAAGTaGATTGCTAGTCTGTGTTTGTGTTTAACCCATGCA +
Preference number: 3 (lower is better)
Translates to: VIYFQRPPGLFK*IASLCLCLTHA
Trigger: TGCATGGGTTAAACACAAACACAGACTAGCAATGCACTTGAACAAACCTGGTGGTCTTTGGAAATAAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR CCA 72 bp CTGACTTTATTCCCAGTCCTCTTATCCTGTGAAGGCTaGTACACTAGGAAAGGGATATTTAAAAATGTCAAG +
Preference number: 3 (lower is better)
Translates to: LTLFPVLLSCEG*YTRKGIFKNVK
Trigger: CTTGACATTTTTAAATATCCCTTTCCTAGTGTACCAGCCTTCACAGGATAAGAGGACTGGGAATAAAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR CAA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACATGGTTGCTTTGACTTaGGATCTAATCAAGATAGGG +
Preference number: 3 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHMVALT*DLIKIG
Trigger: CCCTATCTTGATTAGATCCAAAGTCAAAGCAACCAT...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTATGGTTGCTTTGACTTaGGATCTAATCAAGATAGGG +
Preference number: 3 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTMVALT*DLIKIG
Trigger: CCCTATCTTGATTAGATCCAAAGTCAAAGCAACCAT...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR TCA 72 bp ATTCATTTGGAACTTATGGGATGCAGCATAACCAGGTaGAATCTAATGGTGATTTATTTCCAAAGACCACCA +
Preference number: 3 (lower is better)
Translates to: IHLELMGCSITR*NLMVIYFQRPP
Trigger: TGGTGGTCTTTGGAAATAAATCACCATTAGATTTCACCTGGTTATGCTGCATCCCATAAGTTCCAAATGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
3UTR GCA 72 bp GGTTCCAGCTGCTTTCTAGAAATGCTAATGGTGCTTTaGATTTCCATACATAGCTTAAGCTTAATGATTACA +
Preference number: 3 (lower is better)
Translates to: GSSCFLEMLMVL*ISIHSLSLMIT
Trigger: TGTAATCATTAAGCTTAAGCTATGTATGGAAATGCAAAGCACCATTAGCATTTCTAGAAAGCAGCTGGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp GACGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGCCAGTCCGTCAACGCTaGCGGGCTGCGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: DEYPARTRHQRWHCYVMQPVRQR*RAAGTA
Trigger: CGCTGTCCCCGCAGCCCGGCAGCGTTGACGGACTGG...CTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp CCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGATGGTCTGGCCCATGACTaGGGTCGCAGGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCTDQAPEMALLRNAGCDGLAHD*GRRARS
Trigger: GGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACC...ATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp CTGGCCAGTCCAGTGACGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTGGACACCGAGGTCTaGCCCATGACTGGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LASPVTNTLHGPGTRDGTVDTEV*PMTGVA
Trigger: TGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCAC...AGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCGAGAGGTCGCTCTGTaGGCGGCCGCGGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGREVAL*AAAGAR
Trigger: CCGAGCCCCCGCGGCCGCTCACAGAGCGACCTCTCG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367584.8
CDS-3UTR CCA 90 bp TCCAGTGACGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAGCTGCGGGGACAGCGTaGACACCGAGGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSDEYPARTRHQRWHCYVAAGTA*TPRSGP
Trigger: TGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGC...TACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR GCA 90 bp GAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATACCCTGCACGGACCTCAACGCTGCCGGGCTaGGGGGACAGCGTGGACACC +
Preference number: 4 (lower is better)
Translates to: ETLPLMSGQSSDEYPARTSTLPG*GDSVDT
Trigger: GGTGTCCACGCTGTCCCCGCAGCCCGGCAGCGTTGA...GGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCCGAGGTCTGGCCCATaGCTGGGGTCGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGPRSGP*LGSQGQ
Trigger: CTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGAGCGGGCGGCCCCTaGTCGAGGACGACGAGAGGT +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTGAGGP*SRTTRG
Trigger: ACCTCTCGTCGTCCTCGAGCAGGGGCCGCCCGCTCC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367584.8
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATCATGTCCCGGCCTGTaGCGAGCGGCCCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARSCPGL*RAARRV
Trigger: GACCCGGCGGGCCGCTCGGCACAGGCCGGGACATGA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATCATGTCCCGGCCTGTaGCGAGCGGCCCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTSCPGL*RAARRV
Trigger: GACCCGGCGGGCCGCTCGGCACAGGCCGGGACATGA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCCAGTCCGTCAACGCTaGCGGGCTGCGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTPVRQR*RAAGTA
Trigger: CGCTGTCCCCGCAGCCCGGCAGCGTTGACGGACTGG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGCTGCGGGGACAGCGTaGACACCGAGGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLAAGTA*TPRSGP
Trigger: TGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTTCGGCTTGCTGGCTTaGGTGGAGGGACGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVFGLLA*VEGRGP
Trigger: AGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATACCCTGCACGGACCAGGGTCTGGCCAGTCCAGTaGCGAATACCCTGCACGGAC +
Preference number: 4 (lower is better)
Translates to: TLPLMSGQSSDEYPARTRVWPVQ*RIPCTD
Trigger: GTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGAC...CCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp CCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGATTTGGTCCTTCGATCATaGGTCCGCTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PCTDQAPEMALLRNAGCDLVLRS*VRSQPD
Trigger: GTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAA...ATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGGTCTGGCCCATGACTaGGGTCGCAGGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGGLAHD*GRRARS
Trigger: GGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGCTGCGGGGACAGCGTaGACACCGAGGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGAAGTA*TPRSGP
Trigger: TGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGGCTGGCCCCAGCAGTaGCCCCTTTCGGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGGWPQQ*PLSEAQ
Trigger: CTGTGCCTCCGAAAGGGGCCACTGCTGGGGCCAGCC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCCTATGCACGGAGGGTaGGCCAGACCTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVPMHGG*ARPLHP
Trigger: GGGATGCAGAGGTCTGGCCCACCCTCCGTGCATAGG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCAGGCTGGAGTGGAGTaGCACGATCTGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVQAGVE*HDLGPL
Trigger: CAGTGGGCCCAGATCGTGCCACTCCACTCCAGCCTG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGGCCAGAGGAGAAGGTaGTGGAGCCACAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGGQRRR*WSHRGW
Trigger: CCACCCCCTGTGGCTCCAGCACCTTCTCCTCTGGCC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGCCAGAGGAGAAGGTaGTGGAGCCACAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGQRRR*WSHRGW
Trigger: CCACCCCCTGTGGCTCCAGCACCTTCTCCTCTGGCC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATCAACGCTGCCGGGCTaGGGGGACAGCGTGGACACC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTSTLPG*GDSVDT
Trigger: GGTGTCCACGCTGTCCCCGCAGCCCGGCAGCGTTGA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp CTGGCCAGTCCAGTGACGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTACCAGGCACCAGAGATaGCACTGTTACGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: LASPVTNTLHGPGTRDGTTRHQR*HCYVMQ
Trigger: CTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGT...AGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTTCGGCTTGCTGGCTTaGGTGGAGGGACGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSFGLLA*VEGRGP
Trigger: AGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGCGTGTTTCGGCTTGCTaGCTTGGGTGGAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLRVSAC*LGWRDG
Trigger: CCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACG...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGTCAGCTCCAACGCTaGCGAGGACAACTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGQLQR*RGQLEC
Trigger: ACACTCCAGTTGTCCTCGTCAGCGTTGGAGCTGACC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGCCAGGAGTCAGTAGCTaGGGCACTGTCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLPGVSS*GTVFPS
Trigger: GCTGGGGAAGACAGTGCCTCAGCTACTGACTCCTGG...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCCGAGGTCTGGCCCATaGCTGGGGTCGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILPRSGP*LGSQGQ
Trigger: CTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTACTCCTGACCTCAACTaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVTPDLN*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCAGTTGAGGTCAGGAGT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGGCCAGAGGAGAAGGTaGTGGAGCCACAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTGQRRR*WSHRGW
Trigger: CCACCCCCTGTGGCTCCAGCACCTTCTCCTCTGGCC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGCCCAGGGCTTGTCTaGTCGGCGGTCATAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGPGLV*SAVIVR
Trigger: CCTGACTATGACCGCCGAGCAGACAAGCCCTGGGCC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGCCCAGGGCTTGTCTaGTCGGCGGTCATAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTGPGLV*SAVIVR
Trigger: CCTGACTATGACCGCCGAGCAGACAAGCCCTGGGCC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp CTGGCCAGTCCAGTGACGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTCTTTCTTATCTTCTaGCTGTTCCTCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LASPVTNTLHGPGTRDGTVFLIF*LFLQRW
Trigger: CCACCTCTGGAGGAACAGGCAGAAGATAAGAAAGAC...AGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR GCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGGTGGTGGACAGAGGTaGCTATGCACGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGGGGQR*LCTEGG
Trigger: CCCACCCTCCGTGCATAGGCACCTCTGTCCACCACC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGACTGAGCCGGAGATGTaGACCCGGAGCGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILTEPEM*TRSGRP
Trigger: GGGCCGCCCGCTCCGGGTCCACATCTCCGGCTCAGT...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367584.8
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCCAGGAGTCAGTAGCTaGGGCACTGTCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGPGVSS*GTVFPS
Trigger: GCTGGGGAAGACAGTGCCTCAGCTACTGACTCCTGG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATTATGTTGATAAGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAACCGAGGTCTGGCCCATaGCTGGGGTCGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IMLIRETLPLMSGQSSDEPRSGP*LGSQGQ
Trigger: CTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGG...TTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTTATCAACATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR TCA 90 bp ATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGGGAAACACTTCCTTTaGTGTCTGGCCAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: IPCTDQAPEMALLRNAGCGKHFL*CLASPV
Trigger: CACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCC...GCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTGGAGCCACAGGGGGTaGAGGGACCATGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLWSHRG*RDHGLE
Trigger: TTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCCA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCATCAAGCGGCTCCTTTaGTCCTTCGATCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: IPCTDQAPEMALLRNAGCIKRLL*SFDHGS
Trigger: GGACCCATGATCGAAGGACCAAAGGAGCCGCTTGAT...GCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGACACCGAGGTCTaGCCCATGACTGGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARVDTEV*PMTGVA
Trigger: TGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCAC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTGGCCCCAGCAGTaGCCCCTTTCGGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILGWPQQ*PLSEAQ
Trigger: CTGTGCCTCCGAAAGGGGCCACTGCTGGGGCCAGCC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGAAGCCCTGGCTCTTCTaGCTAACGAAGCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLKPWLF*LTKHPV
Trigger: GACAGGGTGCTTCGTTAGTCAGAAGAGCCAGGGCTT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp CTTACTGGTTGGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGGTGTCTGAGGACAGGTaGGAAGTTATTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LTGWIAETLVVDRGAYARVSEDR*EVIGCL
Trigger: CAAGCAGCCAATAACTTCTCACCTGTCCTCAGACAC...CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGTCAGCTCCAACGCTaGCGAGGACAACTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGQLQR*RGQLEC
Trigger: ACACTCCAGTTGTCCTCGTCAGCGTTGGAGCTGACC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACCAGGAGTCAGTAGCTaGGGCACTGTCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTPGVSS*GTVFPS
Trigger: GCTGGGGAAGACAGTGCCTCAGCTACTGACTCCTGG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGCACTAAAGGATTCTaGAGATTCGCCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGTKGF*RFAHQP
Trigger: GGGCTGATGGGCGAATCTTCAGAATCCTTTAGTGCC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATACCCTGCACGGACCTGCGATTCTTGGATGTaGGAAGGCTGCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: ETLPLMSGQSSDEYPARTCDSWM*EGCQGQ
Trigger: TTGTCCCTGGCAGCCTTCTCACATCCAAGAATCGCA...GGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR GCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGGCCCAGGGCTTGTCTaGTCGGCGGTCATAGTCAGG +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHGPGLV*SAVIVR
Trigger: CCTGACTATGACCGCCGAGCAGACAAGCCCTGGGCC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTACCAGTCCGTCAACGCTaGCGGGCTGCGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVPVRQR*RAAGTA
Trigger: CGCTGTCCCCGCAGCCCGGCAGCGTTGACGGACTGG...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367582.7
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGGTCGTGTTTCGGCTTaGTGGCTTGGGTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARGRVSA*WLGWRD
Trigger: GTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTCTCTTGCCCTTGGTaGTCCCCACTGTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLFSCPW*SPLSLL
Trigger: AAGCAGGGACAGTGGGGACCACCAAGGGCAAGAGAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTTGGAGCCACAGGGGGTaGAGGGACCATGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTWSHRG*RDHGLE
Trigger: TTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCCA...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTCAGTTGTGGGCCTCTaGCTCAGCCTCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLSVVGL*LSLLTN
Trigger: GTTAGTCAGGAGGCTGAGCCAGAGGCCCACAACTGA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTTTGGTCCTTCGATCATaGGTCCGCTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTLVLRS*VRSQPD
Trigger: GTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAA...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTGGCTGGGTGGCCGGTaGGGATATGTCTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGWLGGR*GYVSSL
Trigger: CAGAGATGAGACATATCCCCACCGGCCACCCAGCCA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGAGGGACCATGGACTTaGATTTGCCTGTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVEGPWT*ICLCSA
Trigger: AGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGAGGCAGTAATGCACTaGTCCTCAAGAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTEAVMH*SSRGRG
Trigger: CCCTCTCCCTCTTGAGGATCAGTGCATTACTGCCTC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGACAACTGGAGTGTCTaGGGCAGTAATGCACTGATC +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVDNWSV*GSNALI
Trigger: GATCAGTGCATTACTGCCTCAGACACTCCAGTTGTC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCTGGTCTCGAACTCCTaGCCTCAACTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSLVSNS*PQLIHP
Trigger: TGGGTGGATCAGTTGAGGTCAGGAGTTCGAGACCAG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCTGCATCCTTCCTTTTaGTTGTTGGAGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVLHPSF*LLEPSG
Trigger: CCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTATCAACGCTGCCGGGCTaGGGGGACAGCGTGGACACC +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVSTLPG*GDSVDT
Trigger: GGTGTCCACGCTGTCCCCGCAGCCCGGCAGCGTTGA...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367582.7
CDS-3UTR GCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGGTCGTGTTTCGGCTTaGTGGCTTGGGTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHGRVSA*WLGWRD
Trigger: GTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTTTTCTCTTGCCCTTaGTGGTCCCCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLFFSCP*WSPLSL
Trigger: CAGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTGCCTGAGTAGAGAGTaGTTCTGTTCGTCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVCLSRE*FCSSAL
Trigger: AAGAGCCGACGAACAGAACCACTCTCTACTCAGGCA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGCTTGGTATTCCCTGTaGCCTTCATCTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVAWYSL*PSSSEA
Trigger: TGCCTCAGAAGATGAAGGCCACAGGGAATACCAAGC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTCAGTTGTGGGCCTCTaGCTCAGCCTCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGSVVGL*LSLLTN
Trigger: GTTAGTCAGGAGGCTGAGCCAGAGGCCCACAACTGA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTCAGTTGTGGGCCTCTaGCTCAGCCTCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSSVVGL*LSLLTN
Trigger: GTTAGTCAGGAGGCTGAGCCAGAGGCCCACAACTGA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTTCAGTTGTGGGCCTCTaGCTCAGCCTCCTGACTAAC +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTSVVGL*LSLLTN
Trigger: GTTAGTCAGGAGGCTGAGCCAGAGGCCCACAACTGA...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGCTAATTCTTCAGTTGTaGGCCTCTGGCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLLILQL*ASGSAS
Trigger: GGAGGCTGAGCCAGAGGCCCACAACTGAAGAATTAG...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACTTGTTGGAGCCATCTaGGCCACACAGGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTLVGAI*ATQVRS
Trigger: GCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATTGGTCCTTCGATCATaGGTCCGCTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTLVLRS*VRSQPD
Trigger: GTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTGCTGAAACGCTGGTaGTGGACAGAGGTGCCTATG +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLLLKRW*WTEVPM
Trigger: CATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGATTGCTGAAACGCTaGTGGTGGACAGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGLLKR*WWTEVP
Trigger: AGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACCCATGCCCACTGAATaGCCAAGGCTGCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTPMPTE*PRLPSN
Trigger: GTTACTGGGCAGCCTTGGCCATTCAGTGGGCATGGG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCCTCCTCCCCCGAGTTaGCAAGTGGCACAAATATTA +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVPPPPS*QVAQIL
Trigger: TAATATTTGTGCCACTTGCCAACTCGGGGGAGGAGG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATACCCTGCACGGACCTGCTGTGGGGCCATCTaGGTTTGCTATAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ETLPLMSGQSSDEYPARTCCGAI*VCYRSF
Trigger: AAAGCTTCTATAGCAAACTCAGATGGCCCCACAGCA...GGTCCGTGCAGGGTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGAGGGACCATGGACTTaGATTTGCCTGTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLEGPWT*ICLCSA
Trigger: AGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGAGGCAGTAATGCACTaGTCCTCAAGAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTEAVMH*SSRGRG
Trigger: CCCTCTCCCTCTTGAGGATCAGTGCATTACTGCCTC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGACAACTGGAGTGTCTaGGGCAGTAATGCACTGATC +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLDNWSV*GSNALI
Trigger: GATCAGTGCATTACTGCCTCAGACACTCCAGTTGTC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGGTCAGCTCCAACGCTaGCGAGGACAACTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHGQLQR*RGQLEC
Trigger: ACACTCCAGTTGTCCTCGTCAGCGTTGGAGCTGACC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTACTTCCCAGCCAAGCTaGGTCACACACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSTSQPS*VTHFLH
Trigger: GTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGT...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CTTACTGGTTGGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGTCATACCACCTACTCTaGGGAAGATTTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTGWIAETLVVDRGAYARSYHLL*GRFLAL
Trigger: CAGAGCAAGAAATCTTCCTCAGAGTAGGTGGTATGA...CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGTCCCCACTGTCCCTaGTTTGCTAGAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGPHCP*FARNCL
Trigger: GAGACAGTTTCTAGCAAAGCAGGGACAGTGGGGACC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGCTGCATCCTTCCTTTTaGTTGTTGGAGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLLHPSF*LLEPSG
Trigger: CCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAG...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTAGCGAGTTCTGTAGCCTaGCAGCCGGGAAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVASSVA*QPGSPG
Trigger: GCCAGGGCTTCCCGGCTGCCAGGCTACAGAACTCGC...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATTCTCTTGCCCTTGGTaGTCCCCACTGTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARFSCPW*SPLSLL
Trigger: AAGCAGGGACAGTGGGGACCACCAAGGGCAAGAGAA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATTCTCTTGCCCTTGGTaGTCCCCACTGTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTFSCPW*SPLSLL
Trigger: AAGCAGGGACAGTGGGGACCACCAAGGGCAAGAGAA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCTAATTCTTCAGTTGTaGGCCTCTGGCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTLILQL*ASGSAS
Trigger: GGAGGCTGAGCCAGAGGCCCACAACTGAAGAATTAG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCTTGTTGGAGCCATCTaGGCCACACAGGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHLVGAI*ATQVRS
Trigger: GCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCATCGCTGTGCATTCTaGGCAGCAAGAGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTHRCAF*AARVTA
Trigger: TGCAGTGACTCTTGCTGCCCAGAATGCACAGCGATG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCATCAAGCGGCTCCTTTaGTCCTTCGATCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGIKRLL*SFDHGS
Trigger: GGACCCATGATCGAAGGACCAAAGGAGCCGCTTGAT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCATCACCTTTGTGGCTaGCCCCAGCAGTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILHHLCG*PQQWPL
Trigger: AAGGGGCCACTGCTGGGGCCAGCCACAAAGGTGATG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTAGTGGATGGCGAAGCTaGTGCTTTAGAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTSGWRS*CFRASC
Trigger: ACAACTGGCTCTAAAGCATCAGCTTCGCCATCCACT...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGAGGGACCATGGACTTaGATTTGCCTGTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTEGPWT*ICLCSA
Trigger: AGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGGCACTAAAGGATTCTaGAGATTCGCCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARGTKGF*RFAHQP
Trigger: GGGCTGATGGGCGAATCTTCAGAATCCTTTAGTGCC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGGCTTCCCCCAAAGATaGTCAGTCTCTGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLGFPQR*SVSVSK
Trigger: TTTGGAAACAGAGACTGATCATCTTTGGGGGAAGCC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCTCCGATCAAGTCTTTaGGGAATCCACATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTLRSSL*GIHIRR
Trigger: CCTCCTGATGTGGATTCCTCAAAGACTTGATCGGAG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGGTCACATTACATCTaGCTTTATTCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGSHYI*LYSQSS
Trigger: AGAGGACTGGGAATAAAGTCAGATGTAATGTGACCC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGCAAGCTGCCTTAAATaGATGCTGACTACCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVASCLK*MLTTRE
Trigger: TTCTCTGGTAGTCAGCATTCATTTAAGGCAGCTTGC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGGTCCCCACTGTCCCTaGTTTGCTAGAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARGPHCP*FARNCL
Trigger: GAGACAGTTTCTAGCAAAGCAGGGACAGTGGGGACC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGGTCCCCACTGTCCCTaGTTTGCTAGAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTGPHCP*FARNCL
Trigger: GAGACAGTTTCTAGCAAAGCAGGGACAGTGGGGACC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCTGCATCCTTCCTTTTaGTTGTTGGAGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTLHPSF*LLEPSG
Trigger: CCCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCTCTTACCATCGCTGTaGATTCTGGGCAGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTLLPSL*ILGSKS
Trigger: ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGCTCTTTCTTATCTTCTaGCTGTTCCTCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLLFLIF*LFLQRW
Trigger: CCACCTCTGGAGGAACAGGCAGAAGATAAGAAAGAG...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTGTCTAGTTCTTTCCTaGCTGGGATCTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLCLVLS*LGSSWR
Trigger: TCTCCAGGAAGATCCCAGGCAGGAAAGAACTAGACA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCAGGGCCCAAAGAAATaGAAGGCAGCAGAGACAATG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTQGPKK*KAAETM
Trigger: CATTGTCTCTGCTGCCTTGCATTTCTTTGGGCCCTG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTATTATCAGCCCTTGCTaGCACACTGAGCATACTTCA +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVIISPC*HTEHTS
Trigger: TGAAGTATGCTCAGTGTGCCAGCAAGGGCTGATAAT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTTTGGGAACCTGCTGTaGGGCCATCTGAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGFGNLL*GHLSLL
Trigger: TAGCAAACTCAGATGGCCCCACAGCAGGTTCCCAAA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATTTTTCTCTTGCCCTTaGTGGTCCCCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTFFSCP*WSPLSL
Trigger: CAGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTGGAGCCACAGGGGGTaGAGGGACCATGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILWSHRG*RDHGLE
Trigger: TTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCCA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTGCCTGAGTAGAGAGTaGTTCTGTTCGTCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGCLSRE*FCSSAL
Trigger: AAGAGCCGACGAACAGAACCACTCTCTACTCAGGCA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGCTTGGTATTCCCTGTaGCCTTCATCTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGAWYSL*PSSSEA
Trigger: TGCCTCAGAAGATGAAGGCCACAGGGAATACCAAGC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGCTTGGTATTCCCTGTaGCCTTCATCTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSAWYSL*PSSSEA
Trigger: TGCCTCAGAAGATGAAGGCCACAGGGAATACCAAGC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACTAATTCTTCAGTTGTaGGCCTCTGGCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARLILQL*ASGSAS
Trigger: GGAGGCTGAGCCAGAGGCCCACAACTGAAGAATTAG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACTAATTCTTCAGTTGTaGGCCTCTGGCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTLILQL*ASGSAS
Trigger: GGAGGCTGAGCCAGAGGCCCACAACTGAAGAATTAG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCTTGTTGGAGCCATCTaGGCCACACAGGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILLVGAI*ATQVRS
Trigger: GCTCCTCACCTGTGTGGCCCAGATGGCTCCAACAAG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTAGTGGACACCGAGGTCTaGCCCATGACTGGGGTCGCA +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVVDTEV*PMTGVA
Trigger: TGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCAC...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367582.7
CDS-3UTR CCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCTGAAACGCTGGTGGTaGACAGAGGTGCCTATGCAC +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHLKRWW*TEVPMH
Trigger: GTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp AGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGATTCTTGGATGTGAGGTTTCCCCTTTCTTTTaGAGGGAGGTGTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: RHQRWHCYVMQDAILGCEVSPFF*REVFGN
Trigger: GTTCCCAAACACCTCCCTTCAAAAGAAAGGGGAAAC...CTCACATCCAAGAATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTTCCCCTTTCTTTTaGAGGGAGGTGTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTVSPFF*REVFGN
Trigger: GTTCCCAAACACCTCCCTTCAAAAGAAAGGGGAAAC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAAGTGGATGGCGAAGCTaGTGCTTTAGAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTSGWRS*CFRASC
Trigger: ACAACTGGCTCTAAAGCATCAGCTTCGCCATCCACT...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGTCTGAGGACAGGTaGGAAGTTATTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARVSEDR*EVIGCL
Trigger: CAAGCAGCCAATAACTTCTCACCTGTCCTCAGACAC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAGAAGTTGTTGTGTCTaGGGACAGGTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVRSCCV*GQVRSY
Trigger: ATAACTTCTCACCTGTCCTCAGACACAACAACTTCT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCAGTCTGTTCGAGTTTaGAACTCTCCACTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGQSVRV*NSPLWS
Trigger: AGACCAGAGTGGAGAGTTTCAAACTCGAACAGACTG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGAGGCAGTAATGCACTaGTCCTCAAGAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILEAVMH*SSRGRG
Trigger: CCCTCTCCCTCTTGAGGATCAGTGCATTACTGCCTC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGACAACTGGAGTGTCTaGGGCAGTAATGCACTGATC +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARDNWSV*GSNALI
Trigger: GATCAGTGCATTACTGCCTCAGACACTCCAGTTGTC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGGCTTCCCCCAAAGATaGTCAGTCTCTGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGGFPQR*SVSVSK
Trigger: TTTGGAAACAGAGACTGATCATCTTTGGGGGAAGCC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACAAGAGTACCCCCACTaGGAAACACAGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTQEYPH*ETQTNS
Trigger: ACTGTTGGTCTGTGTTTCTCAGTGGGGGTACTCTTG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGGATGAAAGTGGTTTaGCCCTTGAATCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGMKVV*PLNHSD
Trigger: ATCAGAATGATTCAAGGGTCAAACCACTTTCATCCC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp ACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGATTCTTGGCCGATGGGTATCATGTaGCCGTTTGAATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TDQAPEMALLRNAGCDSWPMGIM*PFEFSK
Trigger: CTTTGAAAATTCAAACGGGCACATGATACCCATCGG...CCAAGAATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR GCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCTTTCAGGTCGGATGTaGCAGAAGTTGTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSLSGRM*QKLLCL
Trigger: CAGACACAACAACTTCTGGCACATCCGACCTGAAAG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGGCCAGAGGAGAAGGTaGTGGAGCCACAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTGQRRR*WSHRGW
Trigger: CCACCCCCTGTGGCTCCAGCACCTTCTCCTCTGGCC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACGGCCCAGGGCTTGTCTaGTCGGCGGTCATAGTCAGG +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHGPGLV*SAVIVR
Trigger: CCTGACTATGACCGCCGAGCAGACAAGCCCTGGGCC...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTGSKSH*ILPFAC
Trigger: ACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGSKSH*ILPFAC
Trigger: ACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACTCTTACCATCGCTGTaGATTCTGGGCAGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARLLPSL*ILGSKS
Trigger: ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACTCTTACCATCGCTGTaGATTCTGGGCAGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTLLPSL*ILGSKS
Trigger: ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCCAGGTTTGTTCAAGTaGATTGCTAGTCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVPGLFK*IASLCL
Trigger: CAAACACAGACTAGCAATGCACTTGAACAAACCTGG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATGCCTGAGTAGAGAGTaGTTCTGTTCGTCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARCLSRE*FCSSAL
Trigger: AAGAGCCGACGAACAGAACCACTCTCTACTCAGGCA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGCTTGGTATTCCCTGTaGCCTTCATCTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTAWYSL*PSSSEA
Trigger: TGCCTCAGAAGATGAAGGCCACAGGGAATACCAAGC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCATCGCTGTGCATTCTaGGCAGCAAGAGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHHRCAF*AARVTA
Trigger: TGCAGTGACTCTTGCTGCCCAGAATGCACAGCGATG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTGGTCTGGCCCATGACTaGGGTCGCAGGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISGLAHD*GRRARS
Trigger: GGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACC...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367582.7
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCCAGAGACAGACACCTaGGCATGCAGAAAAATTTTT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVPETDT*ACRKIF
Trigger: AAAAATTTTTCTGCATGCCCAGGTGTCTGTCTCTGG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTAAGACCTCTGGCTGGGTaGCCGGTGGGGATATGTCTC +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVRPLAG*PVGICL
Trigger: GAGACATATCCCCACCGGCCACCCAGCCAGAGGTCT...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATGCTGTGGGGCCATCTaGGTTTGCTATAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARCCGAI*VCYRSF
Trigger: AAAGCTTCTATAGCAAACTCAGATGGCCCCACAGCA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGTTTCCCCTTTCTTTTaGAGGGAGGTGTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTVSPFF*REVFGN
Trigger: GTTCCCAAACACCTCCCTTCAAAAGAAAGGGGAAAC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGTGTCTGAGGACAGGTaGGAAGTTATTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHVSEDR*EVIGCL
Trigger: CAAGCAGCCAATAACTTCTCACCTGTCCTCAGACAC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGAGAAGTTGTTGTGTCTaGGGACAGGTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLRSCCV*GQVRSY
Trigger: ATAACTTCTCACCTGTCCTCAGACACAACAACTTCT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGACAACTGGAGTGTCTaGGGCAGTAATGCACTGATC +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHDNWSV*GSNALI
Trigger: GATCAGTGCATTACTGCCTCAGACACTCCAGTTGTC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTGTCGACTCTCTTCATaGACTTCCATTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLCRLSS*TSISVL
Trigger: AAGCACAGAAATGGAAGTTCATGAAGAGAGTCGACA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCTCCGATCAAGTCTTTaGGGAATCCACATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHLRSSL*GIHIRR
Trigger: CCTCCTGATGTGGATTCCTCAAAGACTTGATCGGAG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGAAGAACAGCTGCACTaGGAGAAAGGCTCGAAAAAT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSEEQLH*EKGSKN
Trigger: ATTTTTCGAGCCTTTCTCTCAGTGCAGCTGTTCTTC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGTGTGTGACCATCACTaGAGTATGAACAACAGGCAT +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGVCDHH*SMNNRH
Trigger: ATGCCTGTTGTTCATACTTCAGTGATGGTCACACAC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATATAACCACCTTTATTaGCTCTGCGTTACTCGGCCC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTYNHLY*LCVTRP
Trigger: GGGCCGAGTAACGCAGAGTCAATAAAGGTGGTTATA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGTCCCCACTGTCCCTaGTTTGCTAGAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILGPHCP*FARNCL
Trigger: GAGACAGTTTCTAGCAAAGCAGGGACAGTGGGGACC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACTTTCAGGTCGGATGTaGCAGAAGTTGTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARLSGRM*QKLLCL
Trigger: CAGACACAACAACTTCTGGCACATCCGACCTGAAAG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCTCTTACCATCGCTGTaGATTCTGGGCAGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHLLPSL*ILGSKS
Trigger: ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACTCTTTCTTATCTTCTaGCTGTTCCTCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARLFLIF*LFLQRW
Trigger: CCACCTCTGGAGGAACAGGCAGAAGATAAGAAAGAG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTTTTTCTCTTGCCCTTaGTGGTCCCCACTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILFFSCP*WSPLSL
Trigger: CAGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CTTACTGGTTGGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGGCATGCAACAAAATTTaGGTAAGCATGCTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LTGWIAETLVVDRGAYARACNKI*VSMLVK
Trigger: CTTAACAAGCATGCTTACCCAAATTTTGTTGCATGC...CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTATCCTGTGAAGGCTaGTACACTAGGAAAGGGATA +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLLSCEG*YTRKGI
Trigger: TATCCCTTTCCTAGTGTACCAGCCTTCACAGGATAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTACTGTACTGTATCTATaGATGCCATCTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVTVLYL*MPSADS
Trigger: AGAATCTGCAGATGGCATCCATAGATACAGTACAGT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGCCAGAGACAGACACCTaGGCATGCAGAAAAATTTTT +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLPETDT*ACRKIF
Trigger: AAAAATTTTTCTGCATGCCCAGGTGTCTGTCTCTGG...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACCGTGTTTCGGCTTGCTaGCTTGGGTGGAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNRVSAC*LGWRDG
Trigger: CCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACG...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCAGGTAGGAGACCTCTaGCTGGGTGGCCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISQVGDL*LGGRWG
Trigger: TCCCCACCGGCCACCCAGCCAGAGGTCTCCTACCTG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAAATGCAGTAGACAGTaGCATTCAGGGGAGGTGATA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGKCSRQ*HSGEVI
Trigger: TATCACCTCCCCTGAATGCCACTGTCTACTGCATTT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGTGTCTGAGGACAGGTaGGAAGTTATTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILVSEDR*EVIGCL
Trigger: CAAGCAGCCAATAACTTCTCACCTGTCCTCAGACAC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCAGTCTGTTCGAGTTTaGAACTCTCCACTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHQSVRV*NSPLWS
Trigger: AGACCAGAGTGGAGAGTTTCAAACTCGAACAGACTG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGCTCCTCTTTGGTTGTaGAACATTTTGCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLAPLWL*NILHFL
Trigger: GAGAAAATGCAAAATGTTTCACAACCAAAGAGGAGC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTCCAGGAGTCAGTAGCTaGGGCACTGTCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTPGVSS*GTVFPS
Trigger: GCTGGGGAAGACAGTGCCTCAGCTACTGACTCCTGG...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTTGTCGACTCTCTTCATaGACTTCCATTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTCRLSS*TSISVL
Trigger: AAGCACAGAAATGGAAGTTCATGAAGAGAGTCGACA...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCACTGTCTTCTCTAGGTaGAGTATGGTTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGTVFSR*SMVALT
Trigger: AGTCAAAGCAACCATACTTCACCTAGAGAAGACAGT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGCACAAAGCACTTGTaGAGAACAATGAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGTKHL*RTMKCK
Trigger: CTTGCATTTCATTGTTCTTCACAAGTGCTTTGTGCC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCATTTCTTGCTCTGTTTaGAATTTGCAGCAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGISCSV*NLQQGA
Trigger: TGCCCCTTGCTGCAAATTTCAAACAGAGCAAGAAAT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCCGATGGGTATCATGTaGCCGTTTGAATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTPMGIM*PFEFSK
Trigger: CTTTGAAAATTCAAACGGGCACATGATACCCATCGG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCCGATGGGTATCATGTaGCCGTTTGAATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGPMGIM*PFEFSK
Trigger: CTTTGAAAATTCAAACGGGCACATGATACCCATCGG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCTTTCAGGTCGGATGTaGCAGAAGTTGTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHLSGRM*QKLLCL
Trigger: CAGACACAACAACTTCTGGCACATCCGACCTGAAAG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACCGGCGTATTTTACTTaGCAAAGCACTTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARPAYFT*QSTFST
Trigger: AGTGGAGAAAGTGCTTTGGCAAGTAAAATACGCCGG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACCGGCGTATTTTACTTaGCAAAGCACTTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTPAYFT*QSTFST
Trigger: AGTGGAGAAAGTGCTTTGGCAAGTAAAATACGCCGG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTGGACAGAGGTGCCTATaGACGGAGGGTGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISGQRCL*TEGGPD
Trigger: GTCTGGCCCACCCTCCGTGCATAGGCACCTCTGTCC...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTGCCTGAGTAGAGAGTaGTTCTGTTCGTCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILCLSRE*FCSSAL
Trigger: AAGAGCCGACGAACAGAACCACTCTCTACTCAGGCA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTCTCACTCTTCGTTATaGACGATGAAACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVSHSSL*TMKPCK
Trigger: TTTACAAGGTTTCATCGTCCATAACGAAGAGTGAGA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATGCCTGGGATCTTCCTaGAGATGGGTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTCLGSS*RWVCFL
Trigger: AAGAAAACAAACCCATCTCCAGGAAGATCCCAGGCA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGTTTCCCCTTTCTTTTaGAGGGAGGTGTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILVSPFF*REVFGN
Trigger: GTTCCCAAACACCTCCCTTCAAAAGAAAGGGGAAAC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAAGAAGTTGTTGTGTCTaGGGACAGGTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTRSCCV*GQVRSY
Trigger: ATAACTTCTCACCTGTCCTCAGACACAACAACTTCT...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCAGTCTGTTCGAGTTTaGAACTCTCCACTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILQSVRV*NSPLWS
Trigger: AGACCAGAGTGGAGAGTTTCAAACTCGAACAGACTG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAACTGTCTTCTCTAGGTaGAGTATGGTTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARTVFSR*SMVALT
Trigger: AGTCAAAGCAACCATACTTCACCTAGAGAAGACAGT...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGGCACAAAGCACTTGTaGAGAACAATGAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARGTKHL*RTMKCK
Trigger: CTTGCATTTCATTGTTCTTCACAAGTGCTTTGTGCC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTCTTGGTGTTTACAATaGCTGAGAATGCTACTGACA +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSSWCLQ*LRMLLT
Trigger: TGTCAGTAGCATTCTCAGTCATTGTAAACACCAAGA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTGGCATTCAGGGGAGGTaGTACCAACCTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISGIQGR*YQPPRE
Trigger: CTCCCTGGGAGGTTGGTATCACCTCCCCTGAATGCC...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCATTCTGATTATTTCTaGAGGCGAGTTAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHHSDYF*RRVSPA
Trigger: TGCAGGGCTAACTCGCCTTCAGAAATAATCAGAATG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACCGATGGGTATCATGTaGCCGTTTGAATTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTPMGIM*PFEFSK
Trigger: CTTTGAAAATTCAAACGGGCACATGATACCCATCGG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTCTTCAGATGTACGCTaGAAGATGTTTTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSSSDVR*KMFLSS
Trigger: AGAGGACAAAAACATCTTGCAGCGTACATCTGAAGA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTCTTCAGATGTACGCTaGAAGATGTTTTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGSSDVR*KMFLSS
Trigger: AGAGGACAAAAACATCTTGCAGCGTACATCTGAAGA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR GCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGAGTCTAACAAGAGGTaGAGTAATGCTGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGESNKR*SNAGYF
Trigger: AAAGTAACCAGCATTACTGCACCTCTTGTTAGACTC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTTAGGTGGGAATAGCTaGCACAGGATCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILLGGNS*HRILHF
Trigger: GAAATGGAGGATCCTGTGGCAGCTATTCCCACCTAA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATTGCTTTGCTCATATGTaGAGCTGTGCTAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHCFAHM*SCASNV
Trigger: CACATTGCTAGCACAGCTGCACATATGAGCAAAGCA...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACCTGAATGGCCAAGGCTaGCCAGTAACCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNLNGQG*PVTSSL
Trigger: CAGGGAGGAGGTTACTGGGCAGCCTTGGCCATTCAG...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCAGGTGAGAAGTTATTaGCTGCTTGTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSQVRSY*LLVSFS
Trigger: AGAAAAACTGACAAGCAGCCAATAACTTCTCACCTG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACTGGAGCCACAGGGGGTaGAGGGACCATGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNWSHRG*RDHGLE
Trigger: TTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCCA...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGCTCCTCTTTGGTTGTaGAACATTTTGCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTAPLWL*NILHFL
Trigger: GAGAAAATGCAAAATGTTTCACAACCAAAGAGGAGC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTTCTGCTCATCTTCTTTaGTTAAAGCTTCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTSAHLL*LKLLMK
Trigger: CTTCATCAGAAGCTTTAATCAAAGAAGATGAGCAGA...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTCTGCTCATCTTCTTTaGTTAAAGCTTCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGSAHLL*LKLLMK
Trigger: CTTCATCAGAAGCTTTAATCAAAGAAGATGAGCAGA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTTATTACAGGTGTCATaGTTGCCAATACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSLLQVS*LPILSS
Trigger: AGAAGACAGTATTGGCAATCATGACACCTGTAATAA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTTATTTCTGAAGCTTaGTACAGTTTTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLFISEA*YSFLGS
Trigger: TGACCCTAGAAAACTGTAGCAAGCTTCAGAAATAAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGAGTCTAACAAGAGGTaGAGTAATGCTGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARESNKR*SNAGYF
Trigger: AAAGTAACCAGCATTACTGCACCTCTTGTTAGACTC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATTCCTATACAGCATATaGTTACTGGTTGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTFLYSI*LLVGLL
Trigger: CAGCAATCCAACCAGTAAGCATATGCTGTATAGGAA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGGTAGAGTGGCATTCTaGCTTATTTGCTCCTTACAA +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHGRVAF*LICSLQ
Trigger: TTGTAAGGAGCAAATAAGGCAGAATGCCACTCTACC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAATCCATGTCTCAGGAGTaGCGAGGCGAGTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKSMSQE*RGEFCS
Trigger: GCTACAGAACTCGCCTCGCCACTCCTGAGACATGGA...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTATTTGGGAACCTGCTGTaGGGCCATCTGAGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVFGNLL*GHLSLL
Trigger: TAGCAAACTCAGATGGCCCCACAGCAGGTTCCCAAA...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTCTCACTCTTCGTTATaGACGATGAAACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGSHSSL*TMKPCK
Trigger: TTTACAAGGTTTCATCGTCCATAACGAAGAGTGAGA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
3UTR CAA 72 bp TTATTTTTCCTATACAGCATATGCTTACTGGTTGGATaGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATG +
Preference number: 4 (lower is better)
Translates to: LFFLYSICLLVG*LKRWWWTEVPM
Trigger: CATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCATATGCTGTATAGGAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGGCACTAAAGGATTCTaGAGATTCGCCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTGTKGF*RFAHQP
Trigger: GGGCTGATGGGCGAATCTTCAGAATCCTTTAGTGCC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACGGCACTAAAGGATTCTaGAGATTCGCCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNGTKGF*RFAHQP
Trigger: GGGCTGATGGGCGAATCTTCAGAATCCTTTAGTGCC...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTGTCGACTCTCTTCATaGACTTCCATTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILCRLSS*TSISVL
Trigger: AAGCACAGAAATGGAAGTTCATGAAGAGAGTCGACA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAACTTCCCAGCCAAGCTaGGTCACACACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKTSQPS*VTHFLH
Trigger: GTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGT...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATCTGCTCATCTTCTTTaGTTAAAGCTTCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTSAHLL*LKLLMK
Trigger: CTTCATCAGAAGCTTTAATCAAAGAAGATGAGCAGA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTTACTGGTTGGATTGCTaGAACGCTGGTGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTYWLDC*NAGGGQ
Trigger: CTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTA...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATGCAGCATAACCAGGTaGAATCTAATGGTGATTTAT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARCSITR*NLMVIY
Trigger: ATAAATCACCATTAGATTTCACCTGGTTATGCTGCA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACCTCTTGGTCACTGCCTaGCTTTACAGTAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNLLVTA*LYSRAQ
Trigger: CTGGGCTCTACTGTAAAGGCAGGCAGTGACCAAGAG...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATTTGTGTTTAACCCATaGAACAATCCTCATGACAGT +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARFVFNP*NNPHDS
Trigger: ACTGTCATGAGGATTGTTGCATGGGTTAAACACAAA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATCTCACTCTTCGTTATaGACGATGAAACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTSHSSL*TMKPCK
Trigger: TTTACAAGGTTTCATCGTCCATAACGAAGAGTGAGA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAATCAAGCGGCTCCTTTaGTCCTTCGATCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKIKRLL*SFDHGS
Trigger: GGACCCATGATCGAAGGACCAAAGGAGCCGCTTGAT...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367582.7
CDS-3UTR CCA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGCATGCAACAAAATTTaGGTAAGCATGCTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTACNKI*VSMLVK
Trigger: CTTAACAAGCATGCTTACCCAAATTTTGTTGCATGC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTTATCCTGTGAAGGCTaGTACACTAGGAAAGGGATA +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILLSCEG*YTRKGI
Trigger: TATCCCTTTCCTAGTGTACCAGCCTTCACAGGATAA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 72 bp CCACCAGGTTTGTTCAAGTGCATTGCTAGTCTGTGTTaGTGTTTAACCCATGCAACAATCCTCATGACAGTA +
Preference number: 4 (lower is better)
Translates to: PPGLFKCIASLC*CLTHATILMTV
Trigger: TACTGTCATGAGGATTGTTGCATGGGTTAAACACAAACACAGACTAGCAATGCACTTGAACAAACCTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACAGTGGATGGCGAAGCTaGTGCTTTAGAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNSGWRS*CFRASC
Trigger: ACAACTGGCTCTAAAGCATCAGCTTCGCCATCCACT...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTAGTGGATGGCGAAGCTaGTGCTTTAGAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTSGWRS*CFRASC
Trigger: ACAACTGGCTCTAAAGCATCAGCTTCGCCATCCACT...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACGGCTTCCCCCAAAGATaGTCAGTCTCTGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHGFPQR*SVSVSK
Trigger: TTTGGAAACAGAGACTGATCATCTTTGGGGGAAGCC...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATTCTGCTCATCTTCTTTaGTTAAAGCTTCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHSAHLL*LKLLMK
Trigger: CTTCATCAGAAGCTTTAATCAAAGAAGATGAGCAGA...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR TCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGACCCTTGAATCATTCTaGTTATTTCTGAAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILTLESF*LFLKAS
Trigger: ACTCGCCTTCAGAAATAATCAGAATGATTCAAGGGT...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACCTGATTATCAGCCCTTaGTGGCACACTGAGCATACT +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHLIISP*WHTEHT
Trigger: AGTATGCTCAGTGTGCCAGCAAGGGCTGATAATCAG...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHGSKSH*ILPFAC
Trigger: ACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCC...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATTTATTTCTGAAGCTTaGTACAGTTTTCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARFISEA*YSFLGS
Trigger: TGACCCTAGAAAACTGTAGCAAGCTTCAGAAATAAA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACTTTAAGCGATTTCCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNFKRFP*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGGAAATCGCTTAAA...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTACCTGTGTCCTCAAAATaGAGTAGACAGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVPVSSK*SRQWHS
Trigger: TGAATGCCACTGTCTACTGCATTTTGAGGACACAGG...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCAGGTGAGAAGTTATTaGCTGCTTGTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILQVRSY*LLVSFS
Trigger: AGAAAAACTGACAAGCAGCCAATAACTTCTCACCTG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCATCGCTGTGCATTCTaGGCAGCAAGAGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISHRCAF*AARVTA
Trigger: TGCAGTGACTCTTGCTGCCCAGAATGCACAGCGATG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTTGCTGTGGGGCCATCTaGGTTTGCTATAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTCCGAI*VCYRSF
Trigger: AAAGCTTCTATAGCAAACTCAGATGGCCCCACAGCA...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACGGGTCACATTACATCTaGCTTTATTCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHGSHYI*LYSQSS
Trigger: AGAGGACTGGGAATAAAGTCAGATGTAATGTGACCC...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACGGCAGCAAGAGTCACTaGATCCTTCCTTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNGSKSH*ILPFAC
Trigger: ACAAGCAAAAGGAAGGATGCAGTGACTCTTGCTGCC...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACAACACAGACCAACAGTaGTTTGCTCATATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHNTDQQ*FAHMCS
Trigger: GCTGCACATATGAGCAAAGCACTGTTGGTCTGTGTT...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGATTCTAACATGGTCCTaGCTTTTTATAGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KASDEEYPRCLLPSLCILILTWS*LFIVGQ
Trigger: TTGGCCTACTATAAAAAGCCAGGACCATGTTAGAAT...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTGCTGTGGGGCCATCTaGGTTTGCTATAGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISCCGAI*VCYRSF
Trigger: AAAGCTTCTATAGCAAACTCAGATGGCCCCACAGCA...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCAGTCTGTTCGAGTTTaGAACTCTCCACTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISQSVRV*NSPLWS
Trigger: AGACCAGAGTGGAGAGTTTCAAACTCGAACAGACTG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAACCGGCGTATTTTACTTaGCAAAGCACTTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKPAYFT*QSTFST
Trigger: AGTGGAGAAAGTGCTTTGGCAAGTAAAATACGCCGG...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTACTTATTTCTGGCAACTaGATTCACTGGCACAACATA +
Preference number: 4 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVLISGN*IHWHNI
Trigger: TATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAG...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCCCCGAGTTGGCAAGTaGCACAAATATTACTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISPRVGK*HKYYWH
Trigger: ATGCCAGTAATATTTGTGCCACTTGCCAACTCGGGG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTAGAAGTTGTTGTGTCTaGGGACAGGTGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTRSCCV*GQVRSY
Trigger: ATAACTTCTCACCTGTCCTCAGACACAACAACTTCT...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACGCTCCTCTTTGGTTGTaGAACATTTTGCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHAPLWL*NILHFL
Trigger: GAGAAAATGCAAAATGTTTCACAACCAAAGAGGAGC...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACATCCTATTAGTGAAATaGCAACAGACTCTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHILLVK*QQTLGV
Trigger: CACACCTAGAGTCTGTTGTCATTTCACTAATAGGAT...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACTCTTCAGATGTACGCTaGAAGATGTTTTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHSSDVR*KMFLSS
Trigger: AGAGGACAAAAACATCTTGCAGCGTACATCTGAAGA...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTACAGTAGAGCCCAGTaGTACTTCTTTGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISYSRAQ*YFFETW
Trigger: CCAGGTTTCAAAGAAGTAGCACTGGGCTCTACTGTA...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACACTGTACTGTATCTATaGATGCCATCTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHTVLYL*MPSADS
Trigger: AGAATCTGCAGATGGCATCCATAGATACAGTACAGT...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCATATGCTTACTGGTTaGATTGCTGAAACGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISHMLTG*IAETLV
Trigger: CACCAGCGTTTCAGCAATCCAACCAGTAAGCATATG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTACATCTGGCAATGCATaGGATGATTCTGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTTSGNA*DDSVQQ
Trigger: TTGCTGTACAGAATCATCCCATGCATTGCCAGATGT...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACGGCAACTTCTCATTGTaGAGGCTCTCTAAACAACAT +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNGNFSL*RLSKQH
Trigger: ATGTTGTTTAGAGAGCCTCCACAATGAGAAGTTGCC...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTGTCGACTCTCTTCATaGACTTCCATTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISCRLSS*TSISVL
Trigger: AAGCACAGAAATGGAAGTTCATGAAGAGAGTCGACA...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTATCCTATTAGTGAAATaGCAACAGACTCTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTILLVK*QQTLGV
Trigger: CACACCTAGAGTCTGTTGTCATTTCACTAATAGGAT...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTTTGAAACCTGGGTTTaGACTAACTGGGCATGTACT +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISFETWV*TNWACT
Trigger: AGTACATGCCCAGTTAGTTCAAACCCAGGTTTCAAA...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACTCTTCAGATGTACGCTaGAAGATGTTTTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNSSDVR*KMFLSS
Trigger: AGAGGACAAAAACATCTTGCAGCGTACATCTGAAGA...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR GCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGCTCTGTTTGAAATTTaGAGCAAGGGGCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTALFEI*SKGHLK
Trigger: TTTTAAGTGCCCCTTGCTGCAAATTTCAAACAGAGC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACCAGGTGAGAAGTTATTaGCTGCTTGTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNQVRSY*LLVSFS
Trigger: AGAAAAACTGACAAGCAGCCAATAACTTCTCACCTG...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTCTTATTTCTGGCAACTaGATTCACTGGCACAACATA +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTLISGN*IHWHNI
Trigger: TATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAG...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 72 bp CTAGCCACAGTTCATCCAAGTAATGTCAAGACATATTaGCCATTCAGTTTTGGTGATAAAAAGCGACAAAGA +
Preference number: 4 (lower is better)
Translates to: LATVHPSNVKTY*PFSFGDKKRQR
Trigger: TCTTTGTCGCTTTTTATCACCAAAACTGAATGGCAAATATGTCTTGACATTACTTGGATGAACTGTGGCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAATTATTACAGGTGTCATaGTTGCCAATACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKLLQVS*LPILSS
Trigger: AGAAGACAGTATTGGCAATCATGACACCTGTAATAA...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR TCA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGCCTTAAATGAATGCTaGCTACCAGAGAACTATTTT +
Preference number: 4 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTALNEC*LPENYF
Trigger: AAAATAGTTCTCTGGTAGTCAGCATTCATTTAAGGC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACAATAGGATAAGCAGGTaGTTCATTTGGAACTTATGG +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNNRISR*FIWNLW
Trigger: CCATAAGTTCCAAATGAATCACCTGCTTATCCTATT...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR TCA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAATCTTGTTTTGTGTGTaGCCATCACTGAAGTATGAA +
Preference number: 4 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKILFCV*PSLKYE
Trigger: TTCATACTTCAGTGATGGTCACACACAAAACAAGAT...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACTTGAACCTGGGGGAATaGTTTTTATTCTTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNLNLGE*FLFLVF
Trigger: AAACACCAAGAATAAAAAGCATTCCCCCAGGTTCAA...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CCA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACTCTCACTCTTCGTTATaGACGATGAAACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNSHSSL*TMKPCK
Trigger: TTTACAAGGTTTCATCGTCCATAACGAAGAGTGAGA...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTATTCTAACATGGTCCTaGCTTTTTATAGTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISILTWS*LFIVGQ
Trigger: TTGGCCTACTATAAAAAGCCAGGACCATGTTAGAAT...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 72 bp ATAATGGTGAAACAAGAGTATTCTCCGATCAAGTCTTaGAGGAATCCACATCAGGAGGTTAAATTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: IMVKQEYSPIKS*RNPHQEVKFLN
Trigger: ATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTTGATCGGAGAATACTCTTGTTTCACCATTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
3UTR CAA 72 bp AATCTAATGGTGATTTATTTCCAAAGACCACCAGGTTaGTTCAAGTGCATTGCTAGTCTGTGTTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: NLMVIYFQRPPG*FKCIASLCLCL
Trigger: TAAACACAAACACAGACTAGCAATGCACTTGAACAAACCTGGTGGTCTTTGGAAATAAATCACCATTAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR GCA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTATGCTAATGGTGCTTTaGATTTCCATACATAGCTTA +
Preference number: 4 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISMLMVL*ISIHSL
Trigger: TAAGCTATGTATGGAAATGCAAAGCACCATTAGCAT...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS GCA 90 bp GGGTCCGCTCCCAGCCAGACTTCCAGGCGTTCATGTCCCGGCCTGTaGCGAGCGGCCCGCCGGGTCCCCTCACCTTCTACCCCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GSAPSQTSRRSCPGL*RAARRVPSPSTPRG
Trigger: CCCGCGCGGGGTAGAAGGTGAGGGGACCCGGCGGGCCGCTCGGCACAGGCCGGGACATGAACGCCTGGAAGTCTGGCTGGGAGCGGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS GCA 90 bp GTCCGTCAACTGAGCCGGAGATGTGGACCCGGAGCGGGCGGCCCCTaGTCGAGGACGACGAGAGGTCGCTCTGTGAGCGGCCGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: VRQLSRRCGPGAGGP*SRTTRGRSVSGRGG
Trigger: GCCCCCGCGGCCGCTCACAGAGCGACCTCTCGTCGTCCTCGAGCAGGGGCCGCCCGCTCCGGGTCCACATCTCCGGCTCAGTTGACGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367584.8
CDS CCA 90 bp CCGTCAACGCTGCCGGGCTGCGGGGACAGCGTGGACACCGAGGTCTaGCCCATGACTGGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGG +
Preference number: 5 (lower is better)
Translates to: PSTLPGCGDSVDTEV*PMTGVAGPGPAIKR
Trigger: CCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGCCCGGCAGCGTTGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
CDS TCA 90 bp CGCTGCCGGGCTGCGGGGACAGCGTGGACACCGAGGTCTGGCCCATaGCTGGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: RCRAAGTAWTPRSGP*LGSQGQVQRSSGSF
Trigger: AAAGGAGCCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGCCCGGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 90 bp GCCGGGCTGCGGGGACAGCGTGGACACCGAGGTCTGGCCCATGACTaGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGGCTCCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLRGQRGHRGLAHD*GRRARSSDQAAPLV
Trigger: GACCAAAGGAGCCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 90 bp TCTAATACGCTGCCGGGCTGCGGGGACAGCGTGGACACCGAGGTCTaGCCCATGACTGGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGG +
Preference number: 5 (lower is better)
Translates to: SNTLPGCGDSVDTEV*PMTGVAGPGPAIKR
Trigger: CCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGCCCGGCAGCGTATTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542769.5
CDS CCA 90 bp AGGGCCAGGTCCAGCGATCAAGCGGCTCCTTTGGTCCTTCGATCATaGGTCCGCTCCCAGCCAGACTTCCAGGCGTTCATGTCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: RARSSDQAAPLVLRS*VRSQPDFQAFMSRP
Trigger: AGGCCGGGACATGAACGCCTGGAAGTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAAAGGAGCCGCTTGATCGCTGGACCTGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367582.7
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 90 bp ATGACTGGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGGCTCCTTTaGTCCTTCGATCATGGGTCCGCTCCCAGCCAGACTTCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: MTGVAGPGPAIKRLL*SFDHGSAPSQTSRR
Trigger: ACGCCTGGAAGTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAAAGGAGCCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 90 bp GAAGCTTTGTCCAGTCCGTCAACGGCGTTGTCCATGTCTCAGGAGTaGCGAGGCGAGTTCTGTAGCCTGGCAGCCGGGAAGCCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EALSSPSTALSMSQE*RGEFCSLAAGKPWL
Trigger: GAGCCAGGGCTTCCCGGCTGCCAGGCTACAGAACTCGCCTCGCCACTCCTGAGACATGGACAACGCCGTTGACGGACTGGACAAAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305766.10
ENST00000427704.6
CDS TCA 90 bp CGAGGCGAGTTCTGTAGCCTGGCAGCCGGGAAGCCCTGGCTCTTCTaGCTAACGAAGCACCCTGTCCTTCTGCTGATTATCAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: RGEFCSLAAGKPWLF*LTKHPVLLLIISPC
Trigger: GCAAGGGCTGATAATCAGCAGAAGGACAGGGTGCTTCGTTAGTCAGAAGAGCCAGGGCTTCCCGGCTGCCAGGCTACAGAACTCGCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305766.10
ENST00000427704.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTTCGGCTTGCTGGCTaGGGTGGAGGGACGGGGGCC +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLFRLAG*GGGTGA
Trigger: GGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS TCA 90 bp GAGGAGAAGGTGCTGGAGCCACAGGGGGTGGAGGGACCATGGACTTaGATTTGCCTGTGTTCTGCTCCTCAGCTCCAGGGACAGTCTGTT +
Preference number: 5 (lower is better)
Translates to: EEKVLEPQGVEGPWT*ICLCSAPQLQGQSV
Trigger: AACAGACTGTCCCTGGAGCTGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCCAGCACCTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGGTCGTGTTTCGGCTaGCTGGCTTGGGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGSCFG*LAWVEG
Trigger: TCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp TACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGGATCAAGCGGCTCCTTaGGTCCTTCGATCATGGGTC +
Preference number: 5 (lower is better)
Translates to: YPARTRHQRWHCYVMQDADQAAP*VLRSWV
Trigger: GACCCATGATCGAAGGACCAAAGGAGCCGCTTGATC...CGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACATTTCGGCTTGCTGGCTaGGGTGGAGGGACGGGGGCC +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTFRLAG*GGGTGA
Trigger: GGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAA...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS GCA 90 bp GCCACAGGGGGTGGAGGGACCATGGACTTGAATTTGCCTGTGTTCTaGTCCTCAGCTCCAGGGACAGTCTGTTCGAGTTTGAAACTCTCC +
Preference number: 5 (lower is better)
Translates to: ATGGGGTMDLNLPVF*SSAPGTVCSSLKLS
Trigger: GGAGAGTTTCAAACTCGAACAGACTGTCCCTGGAGCTGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCCACCCCCTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGGCACTTCATCACCTTaGTGGCTGGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGGTSSP*WLAPAV
Trigger: CACTGCTGGGGCCAGCCACAAAGGTGATGAAGTGCC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCGGATGTGCCAGAAGTaGTTGTGTCTGAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVRMCQK*LCLRTG
Trigger: ACCTGTCCTCAGACACAACAACTTCTGGCACATCCG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGAGGGACCATGGACTaGAATTTGCCTGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGGTMD*NLPVFC
Trigger: GCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTCCGAGTCAGAGTCATaGGCTTGGTATTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVSESES*AWYSLW
Trigger: CCACAGGGAATACCAAGCCAATGACTCTGACTCGGA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTCATCCTTCCTTTTGCTaGTTGGAGCCATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVHPSFC*LEPSGP
Trigger: TGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATG...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGATCAAGCGGCTCCTTaGGTCCTTCGATCATGGGTC +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLDQAAP*VLRSWV
Trigger: GACCCATGATCGAAGGACCAAAGGAGCCGCTTGATC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGGCACTTCATCACCTTaGTGGCTGGCCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTGTSSP*WLAPAV
Trigger: CACTGCTGGGGCCAGCCACAAAGGTGATGAAGTGCC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS GCA 90 bp TCCAGGGACAGTCTGTTCGAGTTTGAAACTCTCCACTCTGGTCTCTaGAGGCTCTCCTTTCAGGTCGGATGTGCCAGAAGTTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SRDSLFEFETLHSGL*RLSFQVGCARSCCV
Trigger: GACACAACAACTTCTGGCACATCCGACCTGAAAGGAGAGCCTGCAGAGACCAGAGTGGAGAGTTTCAAACTCGAACAGACTGTCCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAAGTCCGTCAACGGCGTaGTCCATGTCTCAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARSPSTA*SMSQEW
Trigger: CCACTCCTGAGACATGGACAACGCCGTTGACGGACT...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp GACGAATACCCTGCACGGACCAGGCACCAGAGATGGCACTGTTACGTAATGCAGCAGCTCCTCTCTACTTaGTCGTGTGGATATCTTCCT +
Preference number: 5 (lower is better)
Translates to: DEYPARTRHQRWHCYVMQQLLST*SCGYLP
Trigger: AGGAAGATATCCACACGACAAAGTAGAGAGGAGCTG...CTGCATTACGTAACAGTGCCATCTCTGGTGCCTGGTCCGTGCAGGGTATTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTTGTCAGTTTTTCTCTaGCCCTTGGTGGTCCCCACT +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVLSVFL*PLVVPT
Trigger: AGTGGGGACCACCAAGGGCAAGAGAAAAACTGACAA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGGTCAGAGTCATTGGCTaGGTATTCCCTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLVRVIG*VFPVAF
Trigger: GAAGGCCACAGGGAATACCAAGCCAATGACTCTGAC...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTCCGAGTCAGAGTCATaGGCTTGGTATTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLSESES*AWYSLW
Trigger: CCACAGGGAATACCAAGCCAATGACTCTGACTCGGA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCCTTCCTTTTGCTTGTaGGAGCCATCTGGGCCACAC +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGPSFCL*EPSGPH
Trigger: GTGTGGCCCAGATGGCTCCAACAAGCAAAAGGAAGG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTCCCAGGGAGGGCATTaGAACCTGGGGGAATGCTTT +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSSQGGH*NLGECF
Trigger: AAAGCATTCCCCCAGGTTCAAATGCCCTCCCTGGGA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS GCA 90 bp AACTCTCCACTCTGGTCTCTGCAGGCTCTCCTTTCAGGTCGGATGTaGCAGAAGTTGTTGTGTCTGAGGACAGGTGAGAAGTTATTGGCT +
Preference number: 5 (lower is better)
Translates to: NSPLWSLQALLSGRM*QKLLCLRTGEKLLA
Trigger: AGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTGGCACATCCGACCTGAAAGGAGAGCCTGCAGAGACCAGAGTGGAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTTTTCTCTTGCCCTaGGTGGTCCCCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARVFLLP*VVPTVP
Trigger: AGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAAC...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGTTTTTCTCTTGCCCTaGGTGGTCCCCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTVFLLP*VVPTVP
Trigger: AGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAAC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCGGATGTGCCAGAAGTaGTTGTGTCTGAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSRMCQK*LCLRTG
Trigger: ACCTGTCCTCAGACACAACAACTTCTGGCACATCCG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCGGATGTGCCAGAAGTaGTTGTGTCTGAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTRMCQK*LCLRTG
Trigger: ACCTGTCCTCAGACACAACAACTTCTGGCACATCCG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTACAGTCTGTTCGAGTTaGAAACTCTCCACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVTVCSS*KLSTLV
Trigger: GACCAGAGTGGAGAGTTTCAAACTCGAACAGACTGT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTACCATGGACTTGAATTaGCCTGTGTTCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVTMDLN*PVFCSS
Trigger: TGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGAGGGACCATGGACTaGAATTTGCCTGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGGTMD*NLPVFC
Trigger: GCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCGTCAGAGTCATTGGCTaGGTATTCCCTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGVRVIG*VFPVAF
Trigger: GAAGGCCACAGGGAATACCAAGCCAATGACTCTGAC...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTTCCGAGTCAGAGTCATaGGCTTGGTATTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTSESES*AWYSLW
Trigger: CCACAGGGAATACCAAGCCAATGACTCTGACTCGGA...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGACTGCATCCTTCCTTTaGCTTGTTGGAGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLTASFL*LVGAIW
Trigger: CCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAGT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTTTGCTATAGAAGCTTaGTCCAGTCCGTCAACGCTG +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVFAIEA*SSPSTL
Trigger: CAGCGTTGACGGACTGGACAAAGCTTCTATAGCAAA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTCTCCGATCAAGTCTTaGAGGAATCCACATCAGGAG +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVSPIKS*RNPHQE
Trigger: CTCCTGATGTGGATTCCTCAAAGACTTGATCGGAGA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTGCTTACTGGTTGGATaGCTGAAACGCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGCLLVG*LKRWWW
Trigger: CCACCACCAGCGTTTCAGCAATCCAACCAGTAAGCA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp CTTACTGGTTGGATTGCTGAAACGCTGGTGGTGGACAGAGGTGCCTATGCACGGCTAAGGCACTTGGAATaGTGCACAGCAAAGTATCCT +
Preference number: 5 (lower is better)
Translates to: LTGWIAETLVVDRGAYARLRHLE*CTAKYP
Trigger: AGGATACTTTGCTGTGCACAATTCCAAGTGCCTTAG...CCGTGCATAGGCACCTCTGTCCACCACCAGCGTTTCAGCAATCCAACCAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCCCACTGTCCCTGCTTaGCTAGAAACTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSPTVPA*LETVSF
Trigger: AAAGGAGACAGTTTCTAGCAAAGCAGGGACAGTGGG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATGTTTTTCTCTTGCCCTaGGTGGTCCCCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHVFLLP*VVPTVP
Trigger: AGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAAC...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTTGTCAGTTTTTCTCTaGCCCTTGGTGGTCCCCACT +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGLSVFL*PLVVPT
Trigger: AGTGGGGACCACCAAGGGCAAGAGAAAAACTGACAA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTATGTGCCAGAAGTTGTaGTGTCTGAGGACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSMCQKL*CLRTGE
Trigger: CTCACCTGTCCTCAGACACAACAACTTCTGGCACAT...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGACAGTCTGTTCGAGTTaGAAACTCTCCACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLTVCSS*KLSTLV
Trigger: GACCAGAGTGGAGAGTTTCAAACTCGAACAGACTGT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGACCATGGACTTGAATTaGCCTGTGTTCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLTMDLN*PVFCSS
Trigger: TGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGGAGGGACCATGGACTaGAATTTGCCTGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTGGTMD*NLPVFC
Trigger: GCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGTCAGAGTCATTGGCTaGGTATTCCCTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTVRVIG*VFPVAF
Trigger: GAAGGCCACAGGGAATACCAAGCCAATGACTCTGAC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATCCGAGTCAGAGTCATaGGCTTGGTATTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARSESES*AWYSLW
Trigger: CCACAGGGAATACCAAGCCAATGACTCTGACTCGGA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGAGCCTCCTGACTAACTaGGTTCCAATTTGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLSLLTN*VPICCR
Trigger: CCGACAACAAATTGGAACCAAGTTAGTCAGGAGGCT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGTTCCTTATTGCTGCCTaGTCTGCAGGTGTTAACCTG +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLFLIAA*SAGVNL
Trigger: CAGGTTAACACCTGCAGACAAGGCAGCAATAAGGAA...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTACTGCATCCTTCCTTTaGCTTGTTGGAGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSTASFL*LVGAIW
Trigger: CCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAGT...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTTTTTTGGGTTTAGGTTaGGGTCTAGGCTTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVFLGLG*GLGLGG
Trigger: TCCTCCTAAGCCTAGACCCAAACCTAAACCCAAAAA...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGGCACAGGTGATTTTTaGGGTTTAGGTTTGGGTCTA +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVGTGDF*GLGLGL
Trigger: TAGACCCAAACCTAAACCCAAAAAATCACCTGTGCC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS GCA 90 bp GAGTATCCCTCCGGCGTATTTTACTTGCCAAAGCACTTTCTCCACTaGCATCCTCATCTTCGTCTTCGTCCTCATCATCGGTGTACAAGA +
Preference number: 5 (lower is better)
Translates to: EYPSGVFYLPKHFLH*HPHLRLRPHHRCTR
Trigger: TCTTGTACACCGATGATGAGGACGAAGACGAAGATGAGGATGGCAGTGGAGAAAGTGCTTTGGCAAGTAAAATACGCCGGAGGGATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTCAGCTCCTCTCTACTTaGTCGTGTGGATATCTTCCT +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTQLLST*SCGYLP
Trigger: AGGAAGATATCCACACGACAAAGTAGAGAGGAGCTG...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACCCACTGTCCCTGCTTaGCTAGAAACTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTPTVPA*LETVSF
Trigger: AAAGGAGACAGTTTCTAGCAAAGCAGGGACAGTGGG...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAATGTGCCAGAAGTTGTaGTGTCTGAGGACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTMCQKL*CLRTGE
Trigger: CTCACCTGTCCTCAGACACAACAACTTCTGGCACAT...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCGGATGTGCCAGAAGTaGTTGTGTCTGAGGACAGGT +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHRMCQK*LCLRTG
Trigger: ACCTGTCCTCAGACACAACAACTTCTGGCACATCCG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCACAGTCTGTTCGAGTTaGAAACTCTCCACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGTVCSS*KLSTLV
Trigger: GACCAGAGTGGAGAGTTTCAAACTCGAACAGACTGT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTACCATGGACTTGAATTaGCCTGTGTTCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTTMDLN*PVFCSS
Trigger: TGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGT...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTGGTCTGTTGCCAAGTTaGATAGCAAGAGTATCCCTC +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSGLLPS*IARVSL
Trigger: GAGGGATACTCTTGCTATCAAACTTGGCAACAGACC...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTAGCCTCCTGACTAACTaGGTTCCAATTTGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTSLLTN*VPICCR
Trigger: CCGACAACAAATTGGAACCAAGTTAGTCAGGAGGCT...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATCATCCTTCCTTTTGCTaGTTGGAGCCATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHHPSFC*LEPSGP
Trigger: TGGCCCAGATGGCTCCAACAAGCAAAAGGAAGGATG...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAACTGCATCCTTCCTTTaGCTTGTTGGAGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTTASFL*LVGAIW
Trigger: CCAGATGGCTCCAACAAGCAAAAGGAAGGATGCAGT...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTTTGCTATAGAAGCTTaGTCCAGTCCGTCAACGCTG +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSFAIEA*SSPSTL
Trigger: CAGCGTTGACGGACTGGACAAAGCTTCTATAGCAAA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000440869.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAATGTTCTAAGGCACTaGGAATTGTGCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVNVLRH*ELCTAK
Trigger: CTTTGCTGTGCACAATTCCAAGTGCCTTAGAACATT...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS GCA 90 bp GTTGCCAAGTTTGATAGCAAGAGTATCCCTCCGGCGTATTTTACTTaGCAAAGCACTTTCTCCACTGCCATCCTCATCTTCGTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: VAKFDSKSIPPAYFT*QSTFSTAILIFVFV
Trigger: GACGAAGACGAAGATGAGGATGGCAGTGGAGAAAGTGCTTTGGCAAGTAAAATACGCCGGAGGGATACTCTTGCTATCAAACTTGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGAAGTTATTGGCTGCTaGTCAGTTTTTCTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTEVIGC*SVFLLP
Trigger: GGGCAAGAGAAAAACTGACAAGCAGCCAATAACTTC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATATGTGCCAGAAGTTGTaGTGTCTGAGGACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHMCQKL*CLRTGE
Trigger: CTCACCTGTCCTCAGACACAACAACTTCTGGCACAT...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAACCATGGACTTGAATTaGCCTGTGTTCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARTMDLN*PVFCSS
Trigger: TGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGT...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGAGGGACCATGGACTaGAATTTGCCTGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILGGTMD*NLPVFC
Trigger: GCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAGGTCTGTTGCCAAGTTaGATAGCAAGAGTATCCCTC +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTGLLPS*IARVSL
Trigger: GAGGGATACTCTTGCTATCAAACTTGGCAACAGACC...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAAGCCTCCTGACTAACTaGGTTCCAATTTGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTSLLTN*VPICCR
Trigger: CCGACAACAAATTGGAACCAAGTTAGTCAGGAGGCT...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTTAGTTCTTTCCTTATaGCTGCCTTGTCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSLVLSL*LPCLQV
Trigger: CACCTGCAGACAAGGCAGCAATAAGGAAAGAACTAA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCTTAGTTCTTTCCTTATaGCTGCCTTGTCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGLVLSL*LPCLQV
Trigger: CACCTGCAGACAAGGCAGCAATAAGGAAAGAACTAA...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTTTTGCTATAGAAGCTTaGTCCAGTCCGTCAACTGAG +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSFAIEA*SSPSTE
Trigger: CTCAGTTGACGGACTGGACAAAGCTTCTATAGCAAA...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367584.8
CDS-3UTR CAA 90 bp ATGTTGATAAGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATACTGCAGGATGCGATTCTaGGATGTGAGAAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: MLIRETLPLMSGQSSDEYCRMRF*DVRRLP
Trigger: TGGCAGCCTTCTCACATCCAAGAATCGCATCCTGCA...GTATTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTTATCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGGGTCGTGTTTCGGCTaGCTGGCTTGGGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTGSCFG*LAWVEG
Trigger: TCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGATTTCTTGCTCTGTTaGAAATTTGCAGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTDFLLC*KFAARG
Trigger: GCCCCTTGCTGCAAATTTCAAACAGAGCAAGAAATC...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp GGTGAGGAGCACTTCCCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTGTTTGTTCAAGTGCATaGCTAGTCTGTGTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: GEEHFPAKLSHTLPSPQVVCSSA*LVCVCV
Trigger: AACACAAACACAGACTAGCAATGCACTTGAACAAAC...AACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGGGAAGTGCTCCTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCCAAAGACCACCAGGTTaGTTCAAGTGCATTGCTAGT +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGQRPPG*FKCIAS
Trigger: ACTAGCAATGCACTTGAACAAACCTGGTGGTCTTTG...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS TCA 90 bp CCAGAGATGGCACTGTTACGTAATGCAGGATGCGATTCTTGGATGTaGGAAGGCTGCCAGGGACAAACCACAGATGGATTTGAAATTCAA +
Preference number: 5 (lower is better)
Translates to: PEMALLRNAGCDSWM*EGCQGQTTDGFEIQ
Trigger: TTGAATTTCAAATCCATCTGTGGTTTGTCCCTGGCAGCCTTCTCACATCCAAGAATCGCATCCTGCATTACGTAACAGTGCCATCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCCCACTGTCCCTGCTTaGCTAGAAACTGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILPTVPA*LETVSF
Trigger: AAAGGAGACAGTTTCTAGCAAAGCAGGGACAGTGGG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTAGTTTTTCTCTTGCCCTaGGTGGTCCCCACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVVFLLP*VVPTVP
Trigger: AGGGACAGTGGGGACCACCAAGGGCAAGAGAAAAAC...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCACAGGTGAGAAGTTATaGGCTGCTTGTCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGTGEKL*AACQFF
Trigger: GAAAAACTGACAAGCAGCCAATAACTTCTCACCTGT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATAGCCTCCTGACTAACTaGGTTCCAATTTGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHSLLTN*VPICCR
Trigger: CCGACAACAAATTGGAACCAAGTTAGTCAGGAGGCT...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATTTCCTTATTGCTGCCTaGTCTGCAGGTGTTAACCTG +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHFLIAA*SAGVNL
Trigger: CAGGTTAACACCTGCAGACAAGGCAGCAATAAGGAA...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATTAGTTCTTTCCTTATaGCTGCCTTGTCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARLVLSL*LPCLQV
Trigger: CACCTGCAGACAAGGCAGCAATAAGGAAAGAACTAA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp ATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTGATGGTTGCTTTGACTTaGGATCTAATCAAGATAGGG +
Preference number: 5 (lower is better)
Translates to: ISTVSLTIAVHSGQQESLMVALT*DLIKIG
Trigger: CCCTATCTTGATTAGATCCAAAGTCAAAGCAACCAT...CAGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATTTTTGGGTTTAGGTTaGGGTCTAGGCTTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARFLGLG*GLGLGG
Trigger: TCCTCCTAAGCCTAGACCCAAACCTAAACCCAAAAA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTACCCTCCTCCCCCGAGTaGGCAAGTGGCACAAATATT +
Preference number: 5 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVPSSPE*ASGTNI
Trigger: AATATTTGTGCCACTTGCCAACTCGGGGGAGGAGGG...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGCAGCTCCTCTCTACTTaGTCGTGTGGATATCTTCCT +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILQLLST*SCGYLP
Trigger: AGGAAGATATCCACACGACAAAGTAGAGAGGAGCTG...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AGGCACCAGAGATGGCACTGTTACGTAATGCAGGATGCGATTCTTGGATGTGAGTGTTACATCTCCATCTaGATCAGGCAATTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: RHQRWHCYVMQDAILGCECYISI*IRQFLK
Trigger: CTTAAGGAATTGCCTGATCAAGATGGAGATGTAACA...CTCACATCCAAGAATCGCATCCTGCATTACGTAACAGTGCCATCTCTGGTGCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp CCAGCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACAACAGGTGAGAAGTTATaGGCTGCTTGTCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PAKLSHTLPSPQVKRKHTTGEKL*AACQFF
Trigger: GAAAAACTGACAAGCAGCCAATAACTTCTCACCTGT...TGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCGCTGCAAGATGTTTTaGTCCTCTAGTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: EEYPRCLLPSLCILGSKSRCKMF*SSSSFL
Trigger: TAAGAAAGAACTAGAGGACAAAAACATCTTGCAGCG...ACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTTCCTTATTGCTGCCTaGTCTGCAGGTGTTAACCTG +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILFLIAA*SAGVNL
Trigger: CAGGTTAACACCTGCAGACAAGGCAGCAATAAGGAA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACCCTTCCTTTTGCTTGTaGGAGCCATCTGGGCCACAC +
Preference number: 5 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHPSFCL*EPSGPH
Trigger: GTGTGGCCCAGATGGCTCCAACAAGCAAAAGGAAGG...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTCTCCGATCAAGTCTTaGAGGAATCCACATCAGGAG +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILSPIKS*RNPHQE
Trigger: CTCCTGATGTGGATTCCTCAAAGACTTGATCGGAGA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp ATTATGTTGATAAGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAAAGGGAAACACTTCCTTaGATGTCTGGCCAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: IMLIRETLPLMSGQSSDERETLP*MSGQSS
Trigger: ACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCT...TTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTTATCAACATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAATCTCCCCACCACCTCTaGGTCACTGCCTGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKSPHHL*VTACLY
Trigger: GTAAAGGCAGGCAGTGACCAAGAGGTGGTGGGGAGA...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGACAGCAGAGACAATGTTaGAGGATAGGCACTTTTTCT +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARQQRQC*RIGTFS
Trigger: AGAAAAAGTGCCTATCCTCAAACATTGTCTCTGCTG...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp AATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGAGTCACTATTGCTAGTCTGTGTTaGTGTTTAACCCATGCAACA +
Preference number: 5 (lower is better)
Translates to: NIHGVSYHRCAFWAARVTIASLC*CLTHAT
Trigger: TGTTGCATGGGTTAAACACAAACACAGACTAGCAAT...AGTGACTCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATGTTACATCTCCATCTaGATCAGGCAATTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARCYISI*IRQFLK
Trigger: CTTAAGGAATTGCCTGATCAAGATGGAGATGTAACA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGAAGTTATTGGCTGCTaGTCAGTTTTTCTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILEVIGC*SVFLLP
Trigger: GGGCAAGAGAAAAACTGACAAGCAGCCAATAACTTC...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACGTCAGAGTCATTGGCTaGGTATTCCCTGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHVRVIG*VFPVAF
Trigger: GAAGGCCACAGGGAATACCAAGCCAATGACTCTGAC...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTTAGTTCTTTCCTTATaGCTGCCTTGTCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILLVLSL*LPCLQV
Trigger: CACCTGCAGACAAGGCAGCAATAAGGAAAGAACTAA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGATCAAGCGGCTCCTTaGGTCCTTCGATCATGGGTC +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTDQAAP*VLRSWV
Trigger: GACCCATGATCGAAGGACCAAAGGAGCCGCTTGATC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367582.7
CDS-3UTR CAA 90 bp ATTATGTTGATAAGGGAAACACTTCCTTTGATGTCTGGCCAGTCCAGTGACGAATTTGCTATAGAAGCTTaGTCCAGTCCGTCAACGCTG +
Preference number: 5 (lower is better)
Translates to: IMLIRETLPLMSGQSSDEFAIEA*SSPSTL
Trigger: CAGCGTTGACGGACTGGACAAAGCTTCTATAGCAAA...TTCGTCACTGGACTGGCCAGACATCAAAGGAAGTGTTTCCCTTATCAACATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397980.3
CDS-3UTR CAA 90 bp ATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAGCAAGATATGGTCATATGTATTaGGGAGCAGAAGTCATAGTG +
Preference number: 5 (lower is better)
Translates to: MKNIHGVSYHRCAFWAARYGHMY*GAEVIV
Trigger: CACTATGACTTCTGCTCCCAAATACATATGACCATA...TCTTGCTGCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGGGCAAAACTCATCTTGTTTaGTGTGTGACCATCACTGAA +
Preference number: 5 (lower is better)
Translates to: ASDEEYPRCLLPSLCILGKTHLV*CVTITE
Trigger: TTCAGTGATGGTCACACACAAAACAAGATGAGTTTT...GCCCAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGACAGGTGAGAAGTTATaGGCTGCTTGTCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILTGEKL*AACQFF
Trigger: GAAAAACTGACAAGCAGCCAATAACTTCTCACCTGT...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GCCAAGCTGAGTCACACACTTCCTTCACCACAAGTTAAACGGAAACACACACATTTCCTTAATCATATCTaGGGAACTCAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: AKLSHTLPSPQVKRKHTHFLNHI*GTQENP
Trigger: TGGGTTTTCCTGAGTTCCCAAGATATGATTAAGGAA...ATGTGTGTGTTTCCGTTTAACTTGTGGTGAAGGAAGTGTGTGACTCAGCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACCCCATCCTTATAGGGTaGGCTTTAGGTGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHPILIG*ALGGNS
Trigger: GCTATTCCCACCTAAAGCCAACCCTATAAGGATGGG...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAATTTGCTATAGAAGCTTaGTCCAGTCCGTCAACGGCG +
Preference number: 5 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKFAIEA*SSPSTA
Trigger: CGCCGTTGACGGACTGGACAAAGCTTCTATAGCAAA...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAGCTTCTGATGAAGAATATCCACGGTGTCTCTTACCATCGCTGTGCATTCTGTGTTACATCTCCATCTaGATCAGGCAATTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: KASDEEYPRCLLPSLCILCYISI*IRQFLK
Trigger: CTTAAGGAATTGCCTGATCAAGATGGAGATGTAACA...CAGAATGCACAGCGATGGTAAGAGACACCGTGGATATTCTTCATCAGAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTATGTGCCAGAAGTTGTaGTGTCTGAGGACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTMCQKL*CLRTGE
Trigger: CTCACCTGTCCTCAGACACAACAACTTCTGGCACAT...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTAACAGGTGAGAAGTTATaGGCTGCTTGTCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVTGEKL*AACQFF
Trigger: GAAAAACTGACAAGCAGCCAATAACTTCTCACCTGT...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGGTCTGTTGCCAAGTTaGATAGCAAGAGTATCCCTC +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTGLLPS*IARVSL
Trigger: GAGGGATACTCTTGCTATCAAACTTGGCAACAGACC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTTTCCTTATTGCTGCCTaGTCTGCAGGTGTTAACCTG +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTFLIAA*SAGVNL
Trigger: CAGGTTAACACCTGCAGACAAGGCAGCAATAAGGAA...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp AAGTCTTTGAGGAATCCACATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTCAGACCAACAGTGCTTaGCTCATATGTGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: KSLRNPHQEVKFLNPLISQTNSA*LICAAV
Trigger: CACAGCTGCACATATGAGCAAAGCACTGTTGGTCTG...ACTTATTAAGGGATTTAGGAATTTAACCTCCTGATGTGGATTCCTCAAAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTACGCTGCAAGATGTTTTaGTCCTCTAGTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVRCKMF*SSSSFL
Trigger: TAAGAAAGAACTAGAGGACAAAAACATCTTGCAGCG...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp AAAATAACTAGTCCTTATTCCCATGCAGGACTAACTGCAGGCAGCACATTTGTATATGGTCATATGTATTaGGGAGCAGAAGTCATAGTG +
Preference number: 5 (lower is better)
Translates to: KITSPYSHAGLTAGSTFVYGHMY*GAEVIV
Trigger: CACTATGACTTCTGCTCCCAAATACATATGACCATA...TACAAATGTGCTGCCTGCAGTTAGTCCTGCATGGGAATAAGGACTAGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGGCACAGGTGATTTTTaGGGTTTAGGTTTGGGTCTA +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTGTGDF*GLGLGL
Trigger: TAGACCCAAACCTAAACCCAAAAAATCACCTGTGCC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGTGATTACTCTGTCATaGCTTTTCCCTGGAGGACAT +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTVITLS*LFPGGH
Trigger: ATGTCCTCCAGGGAAAAGCAATGACAGAGTAATCAC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAAAGCAGGTGATTCATTaGGAACTTATGGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKKQVIH*ELMGCS
Trigger: GCTGCATCCCATAAGTTCCAAATGAATCACCTGCTT...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAAGTGGCAACTTCTCATaGTGGAGGCTCTCTAAACAA +
Preference number: 5 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKSGNFS*WRLSKQ
Trigger: TTGTTTAGAGAGCCTCCACAATGAGAAGTTGCCACT...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp TATGGATGCCATCTGCAGATTCTTAAAATACAAGATGAGGATTTCCTCACACACCGCTGCAAGATGTTTTaGTCCTCTAGTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: YGCHLQILKIQDEDFLTHRCKMF*SSSSFL
Trigger: TAAGAAAGAACTAGAGGACAAAAACATCTTGCAGCG...GTGTGTGAGGAAATCCTCATCTTGTATTTTAAGAATCTGCAGATGGCATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp GAGTTTCTTAATGTAAACAATACAGACTGTAGGCTCATAGGGAAAACTTCCACTGAAAATGGGAATGATTaGAGGGTACTCTACCTCTCT +
Preference number: 5 (lower is better)
Translates to: EFLNVNNTDCRLIGKTSTENGND*RVLYLS
Trigger: AGAGAGGTAGAGTACCCTCAAATCATTCCCATTTTC...AGTGGAAGTTTTCCCTATGAGCCTACAGTCTGTATTGTTTACATTAAGAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS-3UTR CAA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAATGTTACATCTCCATCTaGATCAGGCAATTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKCYISI*IRQFLK
Trigger: CTTAAGGAATTGCCTGATCAAGATGGAGATGTAACA...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp CATGAAAACATTCAGACTTATTTCTGGCAACTGGATTCACTGGCACAACATAAAATGGTTGCTTTGACTTaGGATCTAATCAAGATAGGG +
Preference number: 5 (lower is better)
Translates to: HENIQTYFWQLDSLAQHKMVALT*DLIKIG
Trigger: CCCTATCTTGATTAGATCCAAAGTCAAAGCAACCAT...TTTATGTTGTGCCAGTGAATCCAGTTGCCAGAAATAAGTCTGAATGTTTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367582.7
ENST00000427704.6
CDS-3UTR CAA 90 bp CATCAGGAGGTTAAATTCCTAAATCCCTTAATAAGTTCTCAGCTACCGAATAACGGATCCTCCATTTCTTaGCCAGAAATTTTACAACAT +
Preference number: 5 (lower is better)
Translates to: HQEVKFLNPLISSQLPNNGSSIS*PEILQH
Trigger: ATGTTGTAAAATTTCTGGCAAAGAAATGGAGGATCC...GTTATTCGGTAGCTGAGAACTTATTAAGGGATTTAGGAATTTAACCTCCTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427704.6
CDS CCA 72 bp CTGCCGGGCTGCGGGGACAGCGTGGACACCGAGGTCTaGCCCATGACTGGGGTCGCAGGGCCAGGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: LPGCGDSVDTEV*PMTGVAGPGPA
Trigger: CGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGCCCGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS GCA 72 bp CTGAGCCGGAGATGTGGACCCGGAGCGGGCGGCCCCTaGTCGAGGACGACGAGAGGTCGCTCTGTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: LSRRCGPGAGGP*SRTTRGRSVSG
Trigger: GCCGCTCACAGAGCGACCTCTCGTCGTCCTCGAGCAGGGGCCGCCCGCTCCGGGTCCACATCTCCGGCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367584.8
CDS GCA 72 bp CCCAGCCAGACTTCCAGGCGTTCATGTCCCGGCCTGTaGCGAGCGGCCCGCCGGGTCCCCTCACCTTCTACC +
Preference number: 6 (lower is better)
Translates to: PSQTSRRSCPGL*RAARRVPSPST
Trigger: GGTAGAAGGTGAGGGGACCCGGCGGGCCGCTCGGCACAGGCCGGGACATGAACGCCTGGAAGTCTGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367582.7
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
CDS TCA 72 bp GCTGCGGGGACAGCGTGGACACCGAGGTCTGGCCCATaGCTGGGGTCGCAGGGCCAGGTCCAGCGATCAAGC +
Preference number: 6 (lower is better)
Translates to: AAGTAWTPRSGP*LGSQGQVQRSS
Trigger: GCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 72 bp CGGGGACAGCGTGGACACCGAGGTCTGGCCCATGACTaGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGGCT +
Preference number: 6 (lower is better)
Translates to: RGQRGHRGLAHD*GRRARSSDQAA
Trigger: AGCCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATGGGCCAGACCTCGGTGTCCACGCTGTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 72 bp GGAGCCAGCAGCCTCTCGGGTCGTGTTTCGGCTTGCTaGCTTGGGTGGAGGGACGGGGGCCTGCTTACCAGG +
Preference number: 6 (lower is better)
Translates to: GASSLSGRVSAC*LGWRDGGLLTR
Trigger: CCTGGTAAGCAGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCCGAGAGGCTGCTGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS CAA 72 bp CCAGCAGCCTCTCGGGTCGTGTTTCGGCTTGCTGGCTaGGGTGGAGGGACGGGGGCCTGCTTACCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: PAASRVVFRLAG*GGGTGACLPGA
Trigger: GGCTCCTGGTAAGCAGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCCGAGAGGCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS GCA 72 bp AGAGGAGCCAGCAGCCTCTCGGGTCGTGTTTCGGCTTaGTGGCTTGGGTGGAGGGACGGGGGCCTGCTTACC +
Preference number: 6 (lower is better)
Translates to: RGASSLSGRVSA*WLGWRDGGLLT
Trigger: GGTAAGCAGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCCGAGAGGCTGCTGGCTCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS CCA 72 bp CAGCAGCCTCTCGGGTCGTGTTTCGGCTTGCTGGCTTaGGTGGAGGGACGGGGGCCTGCTTACCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: QQPLGSCFGLLA*VEGRGPAYQEP
Trigger: AGGCTCCTGGTAAGCAGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCCGAGAGGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS CAA 72 bp GAGAGGAGCCAGCAGCCTCTCGGGTCGTGTTTCGGCTaGCTGGCTTGGGTGGAGGGACGGGGGCCTGCTTAC +
Preference number: 6 (lower is better)
Translates to: ERSQQPLGSCFG*LAWVEGRGPAY
Trigger: GTAAGCAGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCCGAGAGGCTGCTGGCTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS CAA 72 bp GGTCGCAGGGCCAGGTCCAGCGATCAAGCGGCTCCTTaGGTCCTTCGATCATGGGTCCGCTCCCAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: GRRARSSDQAAP*VLRSWVRSQPD
Trigger: GTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAAAGGAGCCGCTTGATCGCTGGACCTGGCCCTGCGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CAA 90 bp CATGACTGGGGTCGCAGGGCCAGGTCCAGCGATCAAGCGGCTCCTTaGGTCCTTCGATCATGGGTCCGCTCCCAGCCAGACTTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: HDWGRRARSSDQAAP*VLRSWVRSQPDFQA
Trigger: CGCCTGGAAGTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAAAGGAGCCGCTTGATCGCTGGACCTGGCCCTGCGACCCCAGTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 72 bp GTCGCAGGGCCAGGTCCAGCGATCAAGCGGCTCCTTTaGTCCTTCGATCATGGGTCCGCTCCCAGCCAGACT +
Preference number: 6 (lower is better)
Translates to: VAGPGPAIKRLL*SFDHGSAPSQT
Trigger: AGTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAAAGGAGCCGCTTGATCGCTGGACCTGGCCCTGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CCA 72 bp TCCAGTCCGTCAACGGCGTTGTCCATGTCTCAGGAGTaGCGAGGCGAGTTCTGTAGCCTGGCAGCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: SSPSTALSMSQE*RGEFCSLAAGK
Trigger: CTTCCCGGCTGCCAGGCTACAGAACTCGCCTCGCCACTCCTGAGACATGGACAACGCCGTTGACGGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305766.10
ENST00000427704.6
CDS CAA 90 bp TTTTTGAATGAGAGGAGCCAGCAGCCTCTCGGGTCGTGTTTCGGCTaGCTGGCTTGGGTGGAGGGACGGGGGCCTGCTTACCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: FLNERSQQPLGSCFG*LAWVEGRGPAYQEP
Trigger: AGGCTCCTGGTAAGCAGGCCCCCGTCCCTCCACCCAAGCCAGCAAGCCGAAACACGACCCGAGAGGCTGCTGGCTCCTCTCATTCAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427704.6
ENST00000440869.6
CDS CCA 72 bp TCCAGCGATCAAGCGGCTCCTTTGGTCCTTCGATCATaGGTCCGCTCCCAGCCAGACTTCCAGGCGTTCATG +
Preference number: 6 (lower is better)
Translates to: SSDQAAPLVLRS*VRSQPDFQAFM
Trigger: CATGAACGCCTGGAAGTCTGGCTGGGAGCGGACCCATGATCGAAGGACCAAAGGAGCCGCTTGATCGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367582.7
ENST00000397980.3
ENST00000402863.3
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CAA 72 bp GGAGCCACAGGGGGTGGAGGGACCATGGACTTGAATTaGCCTGTGTTCTGCTCCTCAGCTCCAGGGACAGTC +
Preference number: 6 (lower is better)
Translates to: GATGGGGTMDLN*PVFCSSAPGTV
Trigger: GACTGTCCCTGGAGCTGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS CAA 90 bp GAAGGTGCTGGAGCCACAGGGGGTGGAGGGACCATGGACTTGAATTaGCCTGTGTTCTGCTCCTCAGCTCCAGGGACAGTCTGTTCGAGT +
Preference number: 6 (lower is better)
Translates to: EGAGATGGGGTMDLN*PVFCSSAPGTVCSS
Trigger: ACTCGAACAGACTGTCCCTGGAGCTGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCCACCCCCTGTGGCTCCAGCACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS TCA 72 bp TTCTGTAGCCTGGCAGCCGGGAAGCCCTGGCTCTTCTaGCTAACGAAGCACCCTGTCCTTCTGCTGATTATC +
Preference number: 6 (lower is better)
Translates to: FCSLAAGKPWLF*LTKHPVLLLII
Trigger: GATAATCAGCAGAAGGACAGGGTGCTTCGTTAGTCAGAAGAGCCAGGGCTTCCCGGCTGCCAGGCTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305766.10
ENST00000427704.6
CDS TCA 72 bp GTCAGCTCCAACGCTGACGAGGACAACTGGAGTGTCTaGGGCAGTAATGCACTGATCCTCAAGAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VSSNADEDNWSV*GSNALILKRER
Trigger: CCTCTCCCTCTTGAGGATCAGTGCATTACTGCCTCAGACACTCCAGTTGTCCTCGTCAGCGTTGGAGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS CAA 90 bp TTGCCTGTGTTCTGCTCCTCAGCTCCAGGGACAGTCTGTTCGAGTTaGAAACTCTCCACTCTGGTCTCTGCAGGCTCTCCTTTCAGGTCG +
Preference number: 6 (lower is better)
Translates to: LPVFCSSAPGTVCSS*KLSTLVSAGSPFRS
Trigger: CGACCTGAAAGGAGAGCCTGCAGAGACCAGAGTGGAGAGTTTCAAACTCGAACAGACTGTCCCTGGAGCTGAGGAGCAGAACACAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS GCA 72 bp GGTGGAGGGACCATGGACTTGAATTTGCCTGTGTTCTaGTCCTCAGCTCCAGGGACAGTCTGTTCGAGTTTG +
Preference number: 6 (lower is better)
Translates to: GGGTMDLNLPVF*SSAPGTVCSSL
Trigger: CAAACTCGAACAGACTGTCCCTGGAGCTGAGGAGCAGAACACAGGCAAATTCAAGTCCATGGTCCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
CDS CAA 72 bp TCGGTGTACAAGATAGGCCCGTCCGAGTCAGAGTCATaGGCTTGGTATTCCCTGTGGCCTTCATCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SVYKIGPSESES*AWYSLWPSSSE
Trigger: CTCAGAAGATGAAGGCCACAGGGAATACCAAGCCAATGACTCTGACTCGGACGGGCCTATCTTGTACACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS CAA 90 bp CTCTGGTCTCTGCAGGCTCTCCTTTCAGGTCGGATGTGCCAGAAGTaGTTGTGTCTGAGGACAGGTGAGAAGTTATTGGCTGCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: LWSLQALLSGRMCQK*LCLRTGEKLLAACQ
Trigger: CTGACAAGCAGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTGGCACATCCGACCTGAAAGGAGAGCCTGCAGAGACCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
CDS CAA 90 bp CGGATGTGCCAGAAGTTGTTGTGTCTGAGGACAGGTGAGAAGTTATaGGCTGCTTGTCAGTTTTTCTCTTGCCCTTGGTGGTCCCCACTG +
Preference number: 6 (lower is better)
Translates to: RMCQKLLCLRTGEKL*AACQFFSCPWWSPL
Trigger: CAGTGGGGACCACCAAGGGCAAGAGAAAAACTGACAAGCAGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTGGCACATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CAA 90 bp TCCTCATCATCGGTGTACAAGATAGGCCCGTCCGAGTCAGAGTCATaGGCTTGGTATTCCCTGTGGCCTTCATCTTCTGAGGCACTAAAG +
Preference number: 6 (lower is better)
Translates to: SSSSVYKIGPSESES*AWYSLWPSSSEALK
Trigger: CTTTAGTGCCTCAGAAGATGAAGGCCACAGGGAATACCAAGCCAATGACTCTGACTCGGACGGGCCTATCTTGTACACCGATGATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS CAA 90 bp CAGAAAAGCAATACAATCAACACAAAATCCACTGGGATTCTTGCCTaGTCTGCAGGTGTTAACCTGGCCCAGGGCTTGTCTGCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: QKSNTINTKSTGILA*SAGVNLAQGLSARR
Trigger: CCGCCGAGCAGACAAGCCCTGGGCCAGGTTAACACCTGCAGACAAGGCAAGAATCCCAGTGGATTTTGTGTTGATTGTATTGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536245.1
CDS CCA 72 bp CTCCCCTTCTTATCAGCTCCTCTCTACTTTGTCGTGTaGATATCTTCCTTTCTAATACGCTGCCGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: LPFLSAPLYFVV*ISSFLIRCRAA
Trigger: CGCAGCCCGGCAGCGTATTAGAAAGGAAGATATCCACACGACAAAGTAGAGAGGAGCTGATAAGAAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542769.5
CDS CAA 72 bp CAGGCTCTCCTTTCAGGTCGGATGTGCCAGAAGTTGTaGTGTCTGAGGACAGGTGAGAAGTTATTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: QALLSGRMCQKL*CLRTGEKLLAA
Trigger: AGCAGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTGGCACATCCGACCTGAAAGGAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
CDS CAA 72 bp CTGCAGGCTCTCCTTTCAGGTCGGATGTGCCAGAAGTaGTTGTGTCTGAGGACAGGTGAGAAGTTATTGGCT +
Preference number: 6 (lower is better)
Translates to: LQALLSGRMCQK*LCLRTGEKLLA
Trigger: AGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTGGCACATCCGACCTGAAAGGAGAGCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
CDS CAA 90 bp TGGTCTCTGCAGGCTCTCCTTTCAGGTCGGATGTGCCAGAAGTTGTaGTGTCTGAGGACAGGTGAGAAGTTATTGGCTGCTTGTCAGTTT +
Preference number: 6 (lower is better)
Translates to: WSLQALLSGRMCQKL*CLRTGEKLLAACQF
Trigger: AAACTGACAAGCAGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTGGCACATCCGACCTGAAAGGAGAGCCTGCAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
CDS CCA 72 bp CCGTCCGAGTCAGAGTCATTGGCTTGGTATTCCCTGTaGCCTTCATCTTCTGAGGCACTAAAGGATTCTGAA +
Preference number: 6 (lower is better)
Translates to: PSESESLAWYSL*PSSSEALKDSE
Trigger: TTCAGAATCCTTTAGTGCCTCAGAAGATGAAGGCCACAGGGAATACCAAGCCAATGACTCTGACTCGGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS CAA 72 bp CAGAAGTTGTTGTGTCTGAGGACAGGTGAGAAGTTATaGGCTGCTTGTCAGTTTTTCTCTTGCCCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: QKLLCLRTGEKL*AACQFFSCPWW
Trigger: CCACCAAGGGCAAGAGAAAAACTGACAAGCAGCCAATAACTTCTCACCTGTCCTCAGACACAACAACTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000420771.2
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
ENST00000542769.5
CDS CAA 72 bp AATACAATCAACACAAAATCCACTGGGATTCTTGCCTaGTCTGCAGGTGTTAACCTGGCCCAGGGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: NTINTKSTGILA*SAGVNLAQGLS
Trigger: AGACAAGCCCTGGGCCAGGTTAACACCTGCAGACAAGGCAAGAATCCCAGTGGATTTTGTGTTGATTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536245.1
CDS GCA 72 bp TTTGATAGCAAGAGTATCCCTCCGGCGTATTTTACTTaGCAAAGCACTTTCTCCACTGCCATCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: FDSKSIPPAYFT*QSTFSTAILIF
Trigger: GAAGATGAGGATGGCAGTGGAGAAAGTGCTTTGGCAAGTAAAATACGCCGGAGGGATACTCTTGCTATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000427704.6
ENST00000440869.6
CDS CCA 72 bp CTCCCCTTCTTATCAGCTCCTCTCTACTTTGTCGTGTaGATATCTTCCTTTCTAATACTGCCGAGGTTTCTC +
Preference number: 6 (lower is better)
Translates to: LPFLSAPLYFVV*ISSFLILPRFL
Trigger: GAGAAACCTCGGCAGTATTAGAAAGGAAGATATCCACACGACAAAGTAGAGAGGAGCTGATAAGAAGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305766.10
ENST00000367582.7
ENST00000367584.8
ENST00000397980.3
ENST00000402863.3
ENST00000427704.6
ENST00000440869.6
ENST00000451827.6
CDS CAA 72 bp TGCTACAATGGCAGAACTGGGCAGTTGCAACAAAGATaGTATGGCCCACATAGCCTAAACTATTTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: CYNGRTGQLQQR*YGPHSLNYLLS
Trigger: AGACAGCAAATAGTTTAGGCTATGTGGGCCATACAATCTTTGTTGCAACTGCCCAGTTCTGCCATTGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536245.1
CDS GCA 72 bp TTATCCCATCTTCTAACAAGTTATGATACTCATACCTaGCGAGGTTTCTCTAAATTTGTCGCTGGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LSHLLTSYDTHT*RGFSKFVAGLL
Trigger: AAGAAGACCAGCGACAAATTTAGAGAAACCTCGGCAGGTATGAGTATCATAACTTGTTAGAAGATGGGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545919.1