RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGRMC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101856

Ensembl transcript IDs: ENST00000217971.8, ENST00000535419.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ACATCGAACACCTTGCCGTTGATGGCCATGAGTATGCGCGGGTCCTaGACGCCGTCGAAGCGCCGCAGCTCGGCGGGGGTGAAGTCGCGC +
Preference number: 5 (lower is better)
Translates to: TSNTLPLMAMSMRGS*TPSKRRSSAGVKSR
Trigger: GCGCGACTTCACCCCCGCCGAGCTGCGGCGCTTCGACGGCGTCCAGGACCCGCGCATACTCATGGCCATCAACGGCAAGGTGTTCGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CCA 90 bp TGGGTCGGCGCCAGTCGCCACCACATCCTCGGCAGCCATGATCTCTaGAGTAAAGGTTGGGCCGCGCTAGGCAGGGATCCGGAACTCGCC +
Preference number: 5 (lower is better)
Translates to: WVGASRHHILGSHDL*SKGWAALGRDPELA
Trigger: GGCGAGTTCCGGATCCCTGCCTAGCGCGGCCCAACCTTTACTCCAGAGATCATGGCTGCCGAGGATGTGGTGGCGACTGGCGCCGACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS GCA 90 bp CAGAGGCCAAGCAGCAGCAGGTTGAGCGGCGACGTGAAAATCTCATaGAGCAGCCCGCCGCTCTCCAGATCGCTTGGGTCGGCGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QRPSSSRLSGDVKIS*SSPPLSRSLGSAPV
Trigger: GACTGGCGCCGACCCAAGCGATCTGGAGAGCGGCGGGCTGCTGCATGAGATTTTCACGTCGCCGCTCAACCTGCTGCTGCTTGGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CCA 90 bp CGACGTGAAAATCTCATGCAGCAGCCCGCCGCTCTCCAGATCGCTTaGGTCGGCGCCAGTCGCCACCACATCCTCGGCAGCCATGATCTC +
Preference number: 5 (lower is better)
Translates to: RRENLMQQPAALQIA*VGASRHHILGSHDL
Trigger: GAGATCATGGCTGCCGAGGATGTGGTGGCGACTGGCGCCGACCCAAGCGATCTGGAGAGCGGCGGGCTGCTGCATGAGATTTTCACGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CCA 72 bp GCAGAGGGGGCGGCTCGTCGTCGTCGCTGTCGCCGCTaGCCGCCGGCTGGTCCCCGCGCACGATCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: AEGAARRRRCRR*PPAGPRARSCR
Trigger: TCTACAAGATCGTGCGCGGGGACCAGCCGGCGGCCAGCGGCGACAGCGACGACGACGAGCCGCCCCCTCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CCA 72 bp ACCTTGCCGTTGATGGCCATGAGTATGCGCGGGTCCTaGACGCCGTCGAAGCGCCGCAGCTCGGCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: TLPLMAMSMRGS*TPSKRRSSAGV
Trigger: CACCCCCGCCGAGCTGCGGCGCTTCGACGGCGTCCAGGACCCGCGCATACTCATGGCCATCAACGGCAAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CCA 72 bp AATCTCATGCAGCAGCCCGCCGCTCTCCAGATCGCTTaGGTCGGCGCCAGTCGCCACCACATCCTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: NLMQQPAALQIA*VGASRHHILGS
Trigger: GCTGCCGAGGATGTGGTGGCGACTGGCGCCGACCCAAGCGATCTGGAGAGCGGCGGGCTGCTGCATGAGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CAA 72 bp AAATCTCATGCAGCAGCCCGCCGCTCTCCAGATCGCTaGGGTCGGCGCCAGTCGCCACCACATCCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: KSHAAARRSPDR*GRRQSPPHPRQ
Trigger: CTGCCGAGGATGTGGTGGCGACTGGCGCCGACCCAAGCGATCTGGAGAGCGGCGGGCTGCTGCATGAGATTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS CCA 72 bp GCCAGTCGCCACCACATCCTCGGCAGCCATGATCTCTaGAGTAAAGGTTGGGCCGCGCTAGGCAGGGATCCG +
Preference number: 6 (lower is better)
Translates to: ASRHHILGSHDL*SKGWAALGRDP
Trigger: CGGATCCCTGCCTAGCGCGGCCCAACCTTTACTCCAGAGATCATGGCTGCCGAGGATGTGGTGGCGACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2
CDS GCA 72 bp AGCAGCAGCAGGTTGAGCGGCGACGTGAAAATCTCATaGAGCAGCCCGCCGCTCTCCAGATCGCTTGGGTCG +
Preference number: 6 (lower is better)
Translates to: SSSRLSGDVKIS*SSPPLSRSLGS
Trigger: CGACCCAAGCGATCTGGAGAGCGGCGGGCTGCTGCATGAGATTTTCACGTCGCCGCTCAACCTGCTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217971.8
ENST00000535419.2