RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGR (Homo sapiens)

Ensembl gene IDs: ENSG00000082175

Ensembl transcript IDs: ENST00000263463.9, ENST00000325455.10, ENST00000526300.5, ENST00000528960.5, ENST00000530764.1, ENST00000533207.5, ENST00000534013.5, ENST00000534780.5, ENST00000617858.4, ENST00000619228.2, ENST00000632634.1

Found 695 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCACACATaGATAGATGAAGAGTCTCACCCTCTTGACAGAAAACCTCATATG +
Preference number: 1 (lower is better)
Translates to: LHLLPASARRTVRHT*IDEESHPLDRKPHM
Trigger: CATATGAGGTTTTCTGTCAAGAGGGTGAGACTCTTCATCTATCCATGTGTGCCTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp GTCTTACCCGTGTGTATAGACCTGGACTTTGAGGTTGGACAGACATaGAAAGGTAGGGATATAGGTGGAGTGGTACAGATTGTTTGGACA +
Preference number: 1 (lower is better)
Translates to: VLPVCIDLDFEVGQT*KGRDIGGVVQIVWT
Trigger: TGTCCAAACAATCTGTACCACTCCACCTATATCCCTACCTTTGCATGTCTGTCCAACCTCAAAGTCCAGGTCTATACACACGGGTAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 90 bp CCACCCCACATTCTCTCTCCCCATCAGGTTTGTGCAAATGTTGTTTaGGATACTCTTCTCTCTTTGGAATCCCTCCTGTTTGGAATACTC +
Preference number: 1 (lower is better)
Translates to: PPHILSPHQVCANVV*DTLLSLESLLFGIL
Trigger: GAGTATTCCAAACAGGAGGGATTCCAAAGAGAGAAGAGTATCCCAAACAACATTTGCACAAACCTGATGGGGAGAGAGAATGTGGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp AAGAAACCTCCTTCCCACAGCTACCATGTACATACAGTAAGCTTCTaGCTTCCCAGCTGCTGTCTGGTTAGTGGAACTAACAATTTCCTT +
Preference number: 1 (lower is better)
Translates to: KKPPSHSYHVHTVSF*LPSCCLVSGTNNFL
Trigger: AAGGAAATTGTTAGTTCCACTAACCAGACAGCAGCTGGGAAGGCAGAAGCTTACTGTATGTACATGGTAGCTGTGGGAAGGAGGTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp CTTTGGCACTGGACCTTTCTCCTGGTCAGTTGGAGGCAGGCATATTaGTCTGAGGAGAATTGGAATTGTTATAGCGGAAATGTTCAAAGA +
Preference number: 1 (lower is better)
Translates to: LWHWTFLLVSWRQAY*SEENWNCYSGNVQR
Trigger: TCTTTGAACATTTCCGCTATAACAATTCCAATTCTCCTCAGAGCAATATGCCTGCCTCCAACTGACCAGGAGAAAGGTCCAGTGCCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 90 bp CCCATCAGGTTTGTGCAAATGTTGTTTGGGATACTCTTCTCTCTTTaGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTTGCCTTTGGC +
Preference number: 1 (lower is better)
Translates to: PIRFVQMLFGILFSL*NPSCLEYSSLLAFG
Trigger: GCCAAAGGCAAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCAAAGAGAGAAGAGTATCCCAAACAACATTTGCACAAACCTGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 90 bp CTGCTTGGAAGACTCAGGGAAGATTTTACAGAAATGACATTTGGCTaGGTCTCGAAGGTTGAAACATGCATGGAATTTGTGTCAAAGGGG +
Preference number: 1 (lower is better)
Translates to: LLGRLREDFTEMTFG*VSKVETCMEFVSKG
Trigger: CCCCTTTGACACAAATTCCATGCATGTTTCAACCTTCGAGACTCAGCCAAATGTCATTTCTGTAAAATCTTCCCTGAGTCTTCCAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 90 bp AGACAGAGAGAAAATGTCATTCAACTCTCAGTCAGCAAACACTATTaGCCACTTTATATGGCTCCCAGACTCCCAGGAGAGTCACAATTG +
Preference number: 1 (lower is better)
Translates to: RQRENVIQLSVSKHY*PLYMAPRLPGESQL
Trigger: CAATTGTGACTCTCCTGGGAGTCTGGGAGCCATATAAAGTGGTCAATAGTGTTTGCTGACTGAGAGTTGAATGACATTTTCTCTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 90 bp ATGGGTTCAGCACAACTCAGTTCCTCTTTCTCATTTTCTGAAACTTaGACTGCTCTAGTCTTACCCGTGTGTATAGACCTGGACTTTGAG +
Preference number: 1 (lower is better)
Translates to: MGSAQLSSSFSFSET*TALVLPVCIDLDFE
Trigger: CTCAAAGTCCAGGTCTATACACACGGGTAAGACTAGAGCAGTTCAAGTTTCAGAAAATGAGAAAGAGGAACTGAGTTGTGCTGAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 90 bp TTTCTCCTGGTCAGTTGGAGGCAGGCATATTGCTCTGAGGAGAATTaGAATTGTTATAGCGGAAATGTTCAAAGAAAGTCAACATTCAGC +
Preference number: 1 (lower is better)
Translates to: FLLVSWRQAYCSEEN*NCYSGNVQRKSTFS
Trigger: GCTGAATGTTGACTTTCTTTGAACATTTCCGCTATAACAATTCCAATTCTCCTCAGAGCAATATGCCTGCCTCCAACTGACCAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp ATCCAATGGCTATTGAACAGGCATACTTTGGGAAAAACAAACTTATaGCATTACTTGTCTCCTTGTCCACTTCACTTTATCAGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: IQWLLNRHTLGKTNL*HYLSPCPLHFISGD
Trigger: GTCCCCACTGATAAAGTGAAGTGGACAAGGAGACAAGTAATGGCATAAGTTTGTTTTTCCCAAAGTATGCCTGTTCAATAGCCATTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp TGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTaGCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTG +
Preference number: 1 (lower is better)
Translates to: CSNNFRHHFWKFNTQ*PGLDKCIQAVQMKL
Trigger: CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR GCA 90 bp ATATTGACCAGGACACTAATGCCACACTGCAGAGTTAATAATCTGTaGATTTTCTTTACCGTAATGGACAGAGTATGCTTTCTTAGCTGC +
Preference number: 1 (lower is better)
Translates to: ILTRTLMPHCRVNNL*IFFTVMDRVCFLSC
Trigger: GCAGCTAAGAAAGCATACTCTGTCCATTACGGTAAAGAAAATGCACAGATTATTAACTCTGCAGTGTGGCATTAGTGTCCTGGTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 90 bp AGAACAATTGTCAACATACTCTCAAATGTCTTTCCCACTCAGAAATaGGGAGCAAGGTGTATGACTTTAGATTCAAGAAGTATATGGGGC +
Preference number: 1 (lower is better)
Translates to: RTIVNILSNVFPTQK*GARCMTLDSRSIWG
Trigger: GCCCCATATACTTCTTGAATCTAAAGTCATACACCTTGCTCCTCATTTCTGAGTGGGAAAGACATTTGAGAGTATGTTGACAATTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 90 bp ATCATGCAAGTTATCAAGAAGTTTTGTAAGTTGATAGAAACGCTGTaGGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGAT +
Preference number: 1 (lower is better)
Translates to: IMQVIKKFCKLIETL*ARHNSFLPQTNCLD
Trigger: ATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAACTTACAAAACTTCTTGATAACTTGCATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR CCA 90 bp GTCAGTCCTGTCAATGTTCCTATGTTATATCTTCCAAAACCCTTCTaGAAAATTAGAGAGGAGGTCATGATCACCTACAATTCTTCATGT +
Preference number: 1 (lower is better)
Translates to: VSPVNVPMLYLPKPF*KIREEVMITYNSSC
Trigger: ACATGAAGAATTGTAGGTGATCATGACCTCCTCTCTAATTTTCCAGAAGGGTTTTGGAAGATATAACATAGGAACATTGACAGGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp CTGTGCATTTTCTTTACCGTAATGGACAGAGTATGCTTTCTTAGCTaGCTGATTCACATTTCTCTAAAAATGCTTTATCGGTTAAAGCTT +
Preference number: 1 (lower is better)
Translates to: LCIFFTVMDRVCFLS*LIHISLKMLYRLKL
Trigger: AAGCTTTAACCGATAAAGCATTTTTAGAGAAATGTGAATCAGGCAGCTAAGAAAGCATACTCTGTCCATTACGGTAAAGAAAATGCACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 90 bp TTATTCATATCTATCCGAATATTGACCAGGACACTAATGCCACACTaGAGAGTTAATAATCTGTGCATTTTCTTTACCGTAATGGACAGA +
Preference number: 1 (lower is better)
Translates to: LFISIRILTRTLMPH*RVNNLCIFFTVMDR
Trigger: TCTGTCCATTACGGTAAAGAAAATGCACAGATTATTAACTCTGCAGTGTGGCATTAGTGTCCTGGTCAATATTCGGATAGATATGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 90 bp CCTGAACTCAATAATCTAGGCCCAGTTCAGCTTGGATTCATCTTATaGATGTTGACTAATCTGGCTTGGATTATATTTTATAATATGGGT +
Preference number: 1 (lower is better)
Translates to: PELNNLGPVQLGFIL*MLTNLAWIIFYNMG
Trigger: ACCCATATTATAAAATATAATCCAAGCCAGATTAGTCAACATCCATAAGATGAATCCAAGCTGAACTGGGCCTAGATTATTGAGTTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 90 bp CCAGTTCAGCTTGGATTCATCTTATGGATGTTGACTAATCTGGCTTaGATTATATTTTATAATATGGGTGAAGAGTCAGTTGTTTTACTG +
Preference number: 1 (lower is better)
Translates to: PVQLGFILWMLTNLA*IIFYNMGEESVVLL
Trigger: CAGTAAAACAACTGACTCTTCACCCATATTATAAAATATAATCCAAGCCAGATTAGTCAACATCCATAAGATGAATCCAAGCTGAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCAGCCCCTGTGCCTGTaGCCTGAGCTCTGCCTTGGA +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALQPLCL*PELCLG
Trigger: TCCAAGGCAGAGCTCAGGTCACAGGCACAGGGGCTG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAGCTCTGCCTTGGAATaGGGTCAACTCCAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQSSALE*GQLQGG
Trigger: TCCTCCTTGGAGTTGACCTCATTCCAAGGCAGAGCT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCATTGACCACTTTATATaGCTCCCAGACTCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALIDHFI*LPDSQE
Trigger: CTCCTGGGAGTCTGGGAGCCATATAAAGTGGTCAAT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGACTGGACCTTTCTCCTaGTCAGTTGGAGGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQTGPFS*SVGGRH
Trigger: ATGCCTGCCTCCAACTGACCAGGAGAAAGGTCCAGT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACAATAAGGTCAGCATaGCATACAGCAACAAGAGCC +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTIRSA*HTATRA
Trigger: GGCTCTTGTTGCTGTATGTCATGCTGACCTTATTGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTCCTCAAACTGGGTTTaGCTTCGTAGCCCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLSSNWV*LRSPSK
Trigger: TTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGA...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR TCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGTCCTCAAACTGGGTTTaGCTTCGTAGCCCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLSSNWV*LRSPSK
Trigger: TTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGA...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCATACAGTAAGCTTCTaGCTTCCCAGCTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQHTVSF*LPSCCL
Trigger: CAGACAGCAGCTGGGAAGGCAGAAGCTTACTGTATG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCCCCATCAGGTTTGTaGAAATGTTGTTTGGGATAC +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSPSGL*KCCLGY
Trigger: GTATCCCAAACAACATTTGCACAAACCTGATGGGGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCCTACTGCTCACCAGTaGTCCCTCCTCAGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINPTAHQ*SLLSSK
Trigger: CTTGGAGCTGAGGAGGGAGCACTGGTGAGCAGTAGG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGGACACAACTCCTTTTTaGCTCAAACCAATTGCCTTG +
Preference number: 2 (lower is better)
Translates to: KRCELDTTPFCLKPIALMDTTPF*LKPIAL
Trigger: CAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTC...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCAGGTTGACATTCCATaGCTACTTACAAGGCATAGT +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALQVDIP*LLTRHS
Trigger: ACTATGCCTTGTAAGTAGCCATGGAATGTCAACCTG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTTGAGCATGGGTTTTTaGAGGGGCTGTGTTCTAGTC +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQLSMGF*RGCVLV
Trigger: GACTAGAACACAGCCCCTCCAAAAACCCATGCTCAA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTCTCAGTGCCCGGGACTaGATAAATGTATTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFLSARD*INVFKQ
Trigger: CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAG...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR CAA 90 bp CTCTGCCTTGGAATGAGGTCAACTCCAAGGAGGAGAACAAACCCCTaGGTGTTTTTCTTTGCTTTGGTTATAGGATATTCAGAGAAGGTA +
Preference number: 2 (lower is better)
Translates to: LCLGMRSTPRRRTNP*VFFFALVIGYSEKV
Trigger: TACCTTCTCTGAATATCCTATAACCAAAGCAAAGAAAAACACCAAGGGGTTTGTTCTCCTCCTTGGAGTTGACCTCATTCCAAGGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGATGTTAATAAGCTCTaGCCCAAAGGAGCAATTGGC +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQDVNKL*PKGAIG
Trigger: GCCAATTGCTCCTTTGGGTCAGAGCTTATTAACATC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGTCAGCAAACACTATTaGCCACTTTATATGGCTCCC +
Preference number: 2 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRVSKHY*PLYMAP
Trigger: GGGAGCCATATAAAGTGGTCAATAGTGTTTGCTGAC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGGGGACCACAGTTGTTaGGCTATTGAATACAAAAAT +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALGDHSC*AIEYKN
Trigger: ATTTTTGTATTCAATAGCTCAACAACTGTGGTCCCC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTAGAGAGGAGGTCATaGTCACCTACAATTCTTCAT +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLERRS*SPTILH
Trigger: ATGAAGAATTGTAGGTGATCATGACCTCCTCTCTAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCATTTTCTGAAACTTaGACTGCTCTAGTCTTACCC +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSFSET*TALVLP
Trigger: GGGTAAGACTAGAGCAGTTCAAGTTTCAGAAAATGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCACAGCAGGGCCAGATaGGAAAAGAGCTGGGCCTAT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINHSRAR*EKSWAY
Trigger: ATAGGCCCAGCTCTTTTCTCATCTGGCCCTGCTGTG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCATAGCAAGAGGAAGTaGGAGGCTTTCATGATTCAG +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQHSKRK*EAFMIQ
Trigger: CTGAATCATGAAAGCCTCTCACTTCCTCTTGCTATG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGAGAAGGCAAATTACTaGTTGGAAGACTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQEKANY*LEDSGK
Trigger: CTTCCCTGAGTCTTCCAAGCAGTAATTTGCCTTCTC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCCAGACTCCACAGCTaGATAAGGCTGCGGACAAGC +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSRLHS*IRLRTS
Trigger: GCTTGTCCGCAGCCTTATGCAGCTGTGGAGTCTGGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGTTGCCTCAAACCAATTaGCTTGATGAGCTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: KRCELDTTPFCLKPIALMLPQTN*LDELSN
Trigger: ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAA...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCAAATGTGCACAAAATaGCAGGTAAACTCTAGGAGA +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALQMCTK*QVNSRR
Trigger: TCTCCTAGAGTTTACCTGCCATTTTGTGCACATTTG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCATTTCCCACATCCAATaGCTATTGAACAGGCATACT +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALISHIQ*LLNRHT
Trigger: AGTATGCCTGTTCAATAGCCATTGGATGTGGGAAAT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAGTATTTCTACCTTATaGAGAACAAGCAGAGCCACA +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSISTL*RTSRAT
Trigger: TGTGGCTCTGCTTGTTCTCCATAAGGTAGAAATACT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 90 bp AAGACAGAGAGAAAATGTCATTCAACTCTCAGTCAGCAAACACTATaGACCACTTTATATGGCTCCCAGACTCCCAGGAGAGTCACAATT +
Preference number: 2 (lower is better)
Translates to: KTERKCHSTLSQQTL*TTLYGSQTPRRVTI
Trigger: AATTGTGACTCTCCTGGGAGTCTGGGAGCCATATAAAGTGGTCAATAGTGTTTGCTGACTGAGAGTTGAATGACATTTTCTCTCTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGAGGAGAAAGGTATGTaGATTGATACCTCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSEEKGM*IDTSLL
Trigger: GAGGAGGGAGGTATCAATTCACATACCTTTCTCCTC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATCACACAGTTCATTCTaGGAGGTGTCACTCTCACAG +
Preference number: 2 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSHSSF*EVSLSQ
Trigger: CTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCATCTTATGGATGTTaGCTAATCTGGCTTGGATTA +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSSYGC*LIWLGL
Trigger: TAATCCAAGCCAGATTAGTCAACATCCATAAGATGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCTAAAGTCTGCCATGTaGAAATCTCTTCCTATCCCT +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQLKSAM*KSLPIP
Trigger: AGGGATAGGAAGAGATTTTCACATGGCAGACTTTAG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTCTTTCTCATTTTCTaGAACTTGAACTGCTCTAGT +
Preference number: 2 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLFLIF*NLNCSS
Trigger: ACTAGAGCAGTTCAAGTTTCAGAAAATGAGAAAGAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGATTGATAGAAACGCTGTaGGCTCGACACAACTCCTTT +
Preference number: 2 (lower is better)
Translates to: PANILGNCAAITSDIISGLIETL*ARHNSF
Trigger: AAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAA...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR TCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGACTCTCTAATGTAGCTTaGCCTCATCTCCTCAAACTG +
Preference number: 2 (lower is better)
Translates to: PANILGNCAAITSDIISGLSNVA*PHLLKL
Trigger: CAGTTTGAGGAGATGAGGTCAAGCTACATTAGAGAG...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCTGTTACCAGCCAGTaGCAGGAGAACTGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSVTSQ*QENCQA
Trigger: TGCCTGACAGTTCTCCTGGCACTGGCTGGTAACAGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATTTGCCTCAAACCAATTaGCTTGATGAGCTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNLPQTN*LDELSN
Trigger: ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAA...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTCAACATTCAGCTTTTaGCTTCCTCAGTTGGTCTTT +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQSTFSF*LPQLVF
Trigger: AAAGACCAACTGAGGAAGTCAAAAGCTGAATGTTGA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAGACACAACTCCTTTTTaGCTCAAACCAATTGCCTTG +
Preference number: 2 (lower is better)
Translates to: PANILGNCAAITSDIISGDTTPF*LKPIAL
Trigger: CAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTC...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGTGGTACAGATTGTTTaGACAGATAGAATTCTGGGA +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQVVQIV*TDRILG
Trigger: TCCCAGAATTCTATCTGTCCAAACAATCTGTACCAC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 90 bp GATGAAAGGACAGTTTCACCTTCTTGGCAAAAACCTTCAGAACAATaGTCAACATACTCTCAAATGTCTTTCCCACTCAGAAATGAGGAG +
Preference number: 2 (lower is better)
Translates to: DERTVSPSWQKPSEQ*STYSQMSFPLRNEE
Trigger: CTCCTCATTTCTGAGTGGGAAAGACATTTGAGAGTATGTTGACAATTGTTCTGAAGGTTTTTGCCAAGAAGGTGAAACTGTCCTTTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGAAAGGTATGTGAATTaGTACCTCCCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINERYVN*YLPPPP
Trigger: AGGAGGAGGAGGGAGGTATCAATTCACATACCTTTC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAAGATTTTACAGAAATaGCATTTGGCTGAGTCTCGA +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQKILQK*HLAESR
Trigger: TCGAGACTCAGCCAAATGTCATTTCTGTAAAATCTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAACATCAACTGTTCCCTaGGTCCATCACTTAAGCATA +
Preference number: 2 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSTSTVP*VHHLSI
Trigger: TATGCTTAAGTGATGGACTCAGGGAACAGTTGATGT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCAGAAGAAATTACTTaGATACTTCCAGCCCTAATT +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQAEEIT*ILPALI
Trigger: AATTAGGGCTGGAAGTATTCAAGTAATTTCTTCTGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCAATTTAGGACTTGGTaGACTTTTGCTAGACTATCT +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQQFRTW*TFARLS
Trigger: AGATAGTCTAGCAAAAGTTCACCAAGTCCTAAATTG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTAGCTCCAGCTAACTaGTGGTCTGTAAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLAPAN*WSVRPS
Trigger: AGAAGGCCTTACAGACCATCAGTTAGCTGGAGCTAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCACAATCTAGCAGAGTaGCTGGCATACAGCACAGTA +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINHNLAE*LAYSTV
Trigger: TACTGTGCTGTATGCCAGTCACTCTGCTAGATTGTG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATCGAAGGTTGAAACATaGATGGAATTTGTGTCAAAG +
Preference number: 2 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRSKVET*MEFVSK
Trigger: CTTTGACACAAATTCCATGCATGTTTCAACCTTCGA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAACTGTAACTCAAATGTaGACAAAATGGCAGGTAAAC +
Preference number: 2 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRTVTQM*TKWQVN
Trigger: GTTTACCTGCCATTTTGTGCACATTTGAGTTACAGT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAAGTTAGTACCTTTGTaGTGCATGGGTATCAGTAAA +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQKLVPL*CMGISK
Trigger: TTTACTGATACCCATGCAGCACAAAGGTACTAACTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGTATGCTTTCTTAGCTaGCTGATTCACATTTCTCTA +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQVCFLS*LIHISL
Trigger: TAGAGAAATGTGAATCAGGCAGCTAAGAAAGCATAC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAACCCAAAGGAGCAATTaGCAGGAAAGATATTTTACT +
Preference number: 2 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRTQRSN*QERYFT
Trigger: AGTAAAATATCTTTCCTGCCAATTGCTCCTTTGGGT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTAGTACCTTTGTGCTaGATGGGTATCAGTAAAATT +
Preference number: 2 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRLVPLC*MGISKI
Trigger: AATTTTACTGATACCCATGCAGCACAAAGGTACTAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAGGCAAATTACTGCTTaGAAGACTCAGGGAAGATTT +
Preference number: 2 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSRQITA*KTQGRF
Trigger: AAATCTTCCCTGAGTCTTCCAAGCAGTAATTTGCCT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAATAGAAGTACAGTTTaGTGGATAGATACTTCAAGG +
Preference number: 2 (lower is better)
Translates to: LNFYSFASVTSQCQENCQNRSTV*WIDTSR
Trigger: CCTTGAAGTATCTATCCACCAAACTGTACTTCTATT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACTGTCAGGCACACATaGATAGATGAAGAGTCTCAC +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTVRHT*IDEESH
Trigger: GTGAGACTCTTCATCTATCCATGTGTGCCTGACAGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACATCCAATGGCTATTaGACAGGCATACTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTSNGY*TGILWE
Trigger: TTCCCAAAGTATGCCTGTTCAATAGCCATTGGATGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGAGTCTCACCCTCTTaGCAGAAAACCTCATATGAA +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRVSPS*QKTSYE
Trigger: TTCATATGAGGTTTTCTGTCAAGAGGGTGAGACTCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 90 bp CTCAATAATCTAGGCCCAGTTCAGCTTGGATTCATCTTATGGATGTaGACTAATCTGGCTTGGATTATATTTTATAATATGGGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: LNNLGPVQLGFILWM*TNLAWIIFYNMGEE
Trigger: CTCTTCACCCATATTATAAAATATAATCCAAGCCAGATTAGTCAACATCCATAAGATGAATCCAAGCTGAACTGGGCCTAGATTATTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACACTAATGCCACACTaGAGAGTTAATAATCTGTGC +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTLMPH*RVNNLC
Trigger: GCACAGATTATTAACTCTGCAGTGTGGCATTAGTGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGATCAAGCCTTTTATaGTTGCCTGTAAAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRSSLL*LPVKSA
Trigger: TGCAGACTTTACAGGCAAGCATAAAAGGCTTGATCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTGCTTCTTATGCACATaGCTCTGGAGTTGTAAAAGT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINCFLCT*LWSCKS
Trigger: ACTTTTACAACTCCAGAGCCATGTGCATAAGAAGCA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCCTTCAAGTATTTCCTaGTATGTAACCTGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINPSSIS*YVTCLL
Trigger: AAGAAGACAGGTTACATATCAGGAAATACTTGAAGG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCTTGGATTCATCTTATaGATGTTGACTAATCTGGCT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLGFIL*MLTNLA
Trigger: AGCCAGATTAGTCAACATCCATAAGATGAATCCAAG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGGAAAAACAAACTTATaGCATTACTTGTCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINGKTNL*HYLSPC
Trigger: ACAAGGAGACAAGTAATGGCATAAGTTTGTTTTTCC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTCTCCATATTCCAGTaGGAGTCTTCTAAAATATTC +
Preference number: 2 (lower is better)
Translates to: TLVLLISNGVDNFEDCINFSIFQ*ESSKIF
Trigger: GAATATTTTAGAAGACTCCCACTGGAATATGGAGAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp CCAGCAGTCCTGCAACAGTCTTCCAGACTCCACAGCTaGATAAGGCTGCGGACAAGCTTGGGCGCAGCCCCT +
Preference number: 3 (lower is better)
Translates to: PAVLQQSSRLHS*IRLRTSLGAAP
Trigger: AGGGGCTGCGCCCAAGCTTGTCCGCAGCCTTATGCAGCTGTGGAGTCTGGAAGACTGTTGCAGGACTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 72 bp AGCCCCTGTGCCTGTGACCTGAGCTCTGCCTTGGAATaGGGTCAACTCCAAGGAGGAGAACAAACCCCTTGG +
Preference number: 3 (lower is better)
Translates to: SPCACDLSSALE*GQLQGGEQTPW
Trigger: CCAAGGGGTTTGTTCTCCTCCTTGGAGTTGACCTCATTCCAAGGCAGAGCTCAGGTCACAGGCACAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAGGCTGCGGACAAGCTaGGGCGCAGCCCCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: LNFYSFASVTSQCQENCQRLRTS*GAAPVP
Trigger: AGGCACAGGGGCTGCGCCCAAGCTTGTCCGCAGCCT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp CCTTCCCACAGCTACCATGTACATACAGTAAGCTTCTaGCTTCCCAGCTGCTGTCTGGTTAGTGGAACTAAC +
Preference number: 3 (lower is better)
Translates to: PSHSYHVHTVSF*LPSCCLVSGTN
Trigger: GTTAGTTCCACTAACCAGACAGCAGCTGGGAAGGCAGAAGCTTACTGTATGTACATGGTAGCTGTGGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 72 bp GACGGGAACACTGGTAATCTCCACAATCTAGCAGAGTaGCTGGCATACAGCACAGTAAAGGCTTCACAGCTA +
Preference number: 3 (lower is better)
Translates to: DGNTGNLHNLAE*LAYSTVKASQL
Trigger: TAGCTGTGAAGCCTTTACTGTGCTGTATGCCAGTCACTCTGCTAGATTGTGGAGATTACCAGTGTTCCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp TTGGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTTaGCTTTGGCATCTCCTCACCACGCACGTTCTGCTA +
Preference number: 3 (lower is better)
Translates to: LESLLFGILFSS*LWHLLTTHVLL
Trigger: TAGCAGAACGTGCGTGGTGAGGAGATGCCAAAGGCAAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 72 bp CTTTGTGTTTTTCTCTTTGGCACTGGACCTTTCTCCTaGTCAGTTGGAGGCAGGCATATTGCTCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: LCVFLFGTGPFS*SVGGRHIALRR
Trigger: TCTCCTCAGAGCAATATGCCTGCCTCCAACTGACCAGGAGAAAGGTCCAGTGCCAAAGAGAAAAACACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 72 bp TTACCAGCCAGTGCCAGGAGAACTGTCAGGCACACATaGATAGATGAAGAGTCTCACCCTCTTGACAGAAAA +
Preference number: 3 (lower is better)
Translates to: LPASARRTVRHT*IDEESHPLDRK
Trigger: TTTTCTGTCAAGAGGGTGAGACTCTTCATCTATCCATGTGTGCCTGACAGTTCTCCTGGCACTGGCTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAGAAAGGTATGTGAATaGATACCTCCCTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALRKVCE*IPPSSS
Trigger: GGAGGAGGAGGGAGGTATCAATTCACATACCTTTCT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAATACTCTTCTCTTCTaGCCTTTGGCATCTCCTCAC +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALNTLLF*PLASPH
Trigger: GTGAGGAGATGCCAAAGGCAAGAAGAGAAGAGTATT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp GTGTGTATAGACCTGGACTTTGAGGTTGGACAGACATaGAAAGGTAGGGATATAGGTGGAGTGGTACAGATT +
Preference number: 3 (lower is better)
Translates to: VCIDLDFEVGQT*KGRDIGGVVQI
Trigger: AATCTGTACCACTCCACCTATATCCCTACCTTTGCATGTCTGTCCAACCTCAAAGTCCAGGTCTATACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp TGGACCTTTCTCCTGGTCAGTTGGAGGCAGGCATATTaGTCTGAGGAGAATTGGAATTGTTATAGCGGAAAT +
Preference number: 3 (lower is better)
Translates to: WTFLLVSWRQAY*SEENWNCYSGN
Trigger: ATTTCCGCTATAACAATTCCAATTCTCCTCAGAGCAATATGCCTGCCTCCAACTGACCAGGAGAAAGGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAAGGCAAATTACTGCTaGGAAGACTCAGGGAAGATT +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALKANYC*EDSGKI
Trigger: AATCTTCCCTGAGTCTTCCAAGCAGTAATTTGCCTT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAGTCAGCAAACACTATaGACCACTTTATATGGCTCC +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSQQTL*TTLYGS
Trigger: GGAGCCATATAAAGTGGTCAATAGTGTTTGCTGACT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGCTTTTAAGGCCACATaGATTCTAGGCCGAACTTTA +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALAFKAT*ILGRTL
Trigger: TAAAGTTCGGCCTAGAATCAATGTGGCCTTAAAAGC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTGGAATCCCTCCTGTTaGGAATACTCTTCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALWNPSC*EYSSLL
Trigger: AAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 72 bp TTCATGATAGTGGAGGATAAAGAGGAGAAAGGTATGTaGATTGATACCTCCCTCCTCCTCCTCTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: FMIVEDKEEKGM*IDTSLLLLSLS
Trigger: AGAAAGGGAGAGGAGGAGGAGGGAGGTATCAATTCACATACCTTTCTCCTCTTTATCCTCCACTATCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 72 bp GAAAATGTCATTCAACTCTCAGTCAGCAAACACTATTaGCCACTTTATATGGCTCCCAGACTCCCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: ENVIQLSVSKHY*PLYMAPRLPGE
Trigger: CTCTCCTGGGAGTCTGGGAGCCATATAAAGTGGTCAATAGTGTTTGCTGACTGAGAGTTGAATGACATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTAAAGTTAGTACCTTaGTGCTGCATGGGTATCAGT +
Preference number: 3 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLKLVP*CCMGIS
Trigger: ACTGATACCCATGCAGCACAAAGGTACTAACTTTAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGACCCATTGTTCCCTTTaGTGGAATTGCTGCCATAGT +
Preference number: 3 (lower is better)
Translates to: LNFYSFASVTSQCQENCQTHCSL*WNCCHS
Trigger: ACTATGGCAGCAATTCCACAAAAGGGAACAATGGGT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTCGACACAACTCCTTTTaGCCTCAAACCAATTGCCTT +
Preference number: 3 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFRHNSF*PQTNCL
Trigger: AAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCG...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR GCA 72 bp TACCATGTACATACAGTAAGCTTCTGCCTTCCCAGCTaGTGTCTGGTTAGTGGAACTAACAATTTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: YHVHTVSFCLPS*CLVSGTNNFLD
Trigger: ATCAAGGAAATTGTTAGTTCCACTAACCAGACAGCAGCTGGGAAGGCAGAAGCTTACTGTATGTACATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 72 bp ATTCTCTCTCCCCATCAGGTTTGTGCAAATGTTGTTTaGGATACTCTTCTCTCTTTGGAATCCCTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: ILSPHQVCANVV*DTLLSLESLLF
Trigger: AAACAGGAGGGATTCCAAAGAGAGAAGAGTATCCCAAACAACATTTGCACAAACCTGATGGGGAGAGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCTTTCTCCTGGTCAGTaGGAGGCAGGCATATTGCTC +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLSPGQ*EAGILL
Trigger: GAGCAATATGCCTGCCTCCAACTGACCAGGAGAAAG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 72 bp TACTGCTTGGAAGACTCAGGGAAGATTTTACAGAAATaGCATTTGGCTGAGTCTCGAAGGTTGAAACATGCA +
Preference number: 3 (lower is better)
Translates to: YCLEDSGKILQK*HLAESRRLKHA
Trigger: TGCATGTTTCAACCTTCGAGACTCAGCCAAATGTCATTTCTGTAAAATCTTCCCTGAGTCTTCCAAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp CCAGACTCCCAGGAGAGTCACAATTGTAAAATAACATaGTACTGTAACTCAAATGTGCACAAAATGGCAGGT +
Preference number: 3 (lower is better)
Translates to: PDSQESHNCKIT*YCNSNVHKMAG
Trigger: ACCTGCCATTTTGTGCACATTTGAGTTACAGTAGCATGTTATTTTACAATTGTGACTCTCCTGGGAGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGCTGAGTCTCGAAGGTaGAAACATGCATGGAATTTG +
Preference number: 3 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSAESRR*KHAWNL
Trigger: CAAATTCCATGCATGTTTCAACCTTCGAGACTCAGC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGAGCAGTTAAATGACTaGCTTAATCTCATCCAGCTA +
Preference number: 3 (lower is better)
Translates to: LNFYSFASVTSQCQENCQEQLND*LNLIQL
Trigger: TAGCTGGATGAGATTAAGCAAGTCATTTAACTGCTC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTTCATTACAAAGCACTaGGGAAAGGCAGGTTTAATC +
Preference number: 3 (lower is better)
Translates to: LNFYSFASVTSQCQENCQFITKH*GKAGLI
Trigger: GATTAAACCTGCCTTTCCCAAGTGCTTTGTAATGAA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTTGAGCATGGGTTTTaGGAGGGGCTGTGTTCTAGT +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINFEHGF*EGLCSS
Trigger: ACTAGAACACAGCCCCTCCAAAAACCCATGCTCAAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACCTGGACTTTGAGGTaGGACAGACATGCAAAGGTA +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTWTLR*DRHAKV
Trigger: TACCTTTGCATGTCTGTCCAACCTCAAAGTCCAGGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACGACACAACTCCTTTTaGCCTCAAACCAATTGCCTT +
Preference number: 3 (lower is better)
Translates to: ILGNCAAITSDIISGNSTRHNSF*PQTNCL
Trigger: AAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCG...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR TCA 72 bp GTTATCAAGAAGTTTTGTAAGTTGATAGAAACGCTGTaGGCTCGACACAACTCCTTTTTGCCTCAAACCAAT +
Preference number: 3 (lower is better)
Translates to: VIKKFCKLIETL*ARHNSFLPQTN
Trigger: ATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAACTTACAAAACTTCTTGATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR GCA 72 bp AGGACACTAATGCCACACTGCAGAGTTAATAATCTGTaGATTTTCTTTACCGTAATGGACAGAGTATGCTTT +
Preference number: 3 (lower is better)
Translates to: RTLMPHCRVNNL*IFFTVMDRVCF
Trigger: AAAGCATACTCTGTCCATTACGGTAAAGAAAATGCACAGATTATTAACTCTGCAGTGTGGCATTAGTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGGGAGAAACAGAGATaGTTGTTTTCACTCAGCCAT +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINREKQR*LFSLSH
Trigger: ATGGCTGAGTGAAAACAACAATCTCTGTTTCTCCCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTCCTCAGTTGGTCTTaGAAATCCACAGAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINFLSWS*KSTERQ
Trigger: TTGCCTTTCTGTGGATTTCAAAGACCAACTGAGGAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR GCA 72 bp CTATTGAACAGGCATACTTTGGGAAAAACAAACTTATaGCATTACTTGTCTCCTTGTCCACTTCACTTTATC +
Preference number: 3 (lower is better)
Translates to: LLNRHTLGKTNL*HYLSPCPLHFI
Trigger: GATAAAGTGAAGTGGACAAGGAGACAAGTAATGGCATAAGTTTGTTTTTCCCAAAGTATGCCTGTTCAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 72 bp GTCAATGTTCCTATGTTATATCTTCCAAAACCCTTCTaGAAAATTAGAGAGGAGGTCATGATCACCTACAAT +
Preference number: 3 (lower is better)
Translates to: VNVPMLYLPKPF*KIREEVMITYN
Trigger: ATTGTAGGTGATCATGACCTCCTCTCTAATTTTCCAGAAGGGTTTTGGAAGATATAACATAGGAACATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTGGGTGAAGAGTCAGTaGTTTTACTGCTTTTTGTTC +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINWVKSQ*FYCFLF
Trigger: GAACAAAAAGCAGTAAAACAACTGACTCTTCACCCA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACATATCTATCCGAATATaGACCAGGACACTAATGCCA +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINISIRI*TRTLMP
Trigger: TGGCATTAGTGTCCTGGTCAATATTCGGATAGATAT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGGTTTGTGCAAATGTaGTTTGGGATACTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRFVQM*FGILFS
Trigger: AGAGAAGAGTATCCCAAACAACATTTGCACAAACCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR-3UTR CAA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAGCAGTACAGATGAAGTaGTTTGACAAGATCATGCAA +
Preference number: 3 (lower is better)
Translates to: ILGNCAAITSDIISGNSTAVQMK*FDKIMQ
Trigger: TTGCATGATCTTGTCAAACAACTTCATCTGTACTGC...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
3UTR-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTGTGCAAATGTTGTTaGGGATACTCTTCTCTCTTT +
Preference number: 3 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLCKCC*GYSSLF
Trigger: AAAGAGAGAAGAGTATCCCAAACAACATTTGCACAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR TCA 72 bp TTCCAAAACCCTTCTGGAAAATTAGAGAGGAGGTCATaGTCACCTACAATTCTTCATGTTTATGATCATCAT +
Preference number: 3 (lower is better)
Translates to: FQNPSGKLERRS*SPTILHVYDHH
Trigger: ATGATGATCATAAACATGAAGAATTGTAGGTGATCATGACCTCCTCTCTAATTTTCCAGAAGGGTTTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CCA 72 bp AATAATCTAGGCCCAGTTCAGCTTGGATTCATCTTATaGATGTTGACTAATCTGGCTTGGATTATATTTTAT +
Preference number: 3 (lower is better)
Translates to: NNLGPVQLGFIL*MLTNLAWIIFY
Trigger: ATAAAATATAATCCAAGCCAGATTAGTCAACATCCATAAGATGAATCCAAGCTGAACTGGGCCTAGATTATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCCGGCAGCGGGGGCGGTaGCCCCAACGGGAAATCCGG +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSRQRGR*PQREIR
Trigger: CCGGATTTCCCGTTGGGGCCACCGCCCCCGCTGCCG...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCGCCATCGGCGCGTCCTaGTCCACCAGGGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSAIGAS*STRATL
Trigger: CAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGC...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAGCGGCAGGCCCTCCTTaGGCACGGCGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLAAGPP*ARRPGS
Trigger: GCTACCAGGCCGCCGTGCTCAAGGAGGGCCTGCCGC...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGGTACGCGTCGTCCTTaGGCTCGGCGTCGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKGTRRP*ARRRAG
Trigger: ACCCGCCCGACGCCGAGCCCAAGGACGACGCGTACC...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAGGACGCAGACGAGACTaGGGCACTGGCGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLGRRRD*GTGGCG
Trigger: GCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCC...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGGGACGCAGACGAGACTaGGGCACTGGCGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELGRRRD*GTGGCG
Trigger: GCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCC...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTACCCCGGGAACGGACCTaGGGCTGGGCGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLPRERT*GWATQQ
Trigger: CTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGG...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTGGGCGACACAGCAGTaGGGATCCGACCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSWATQQ*GSDLGG
Trigger: TCCCCCGAGGTCGGATCCCCACTGCTGTGTCGCCCA...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGGCGGGGGCAGCCGGTaGATCTTCGGGAAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKGGGSR*IFGKFG
Trigger: CCCGAACTTCCCGAAGATCCACCGGCTGCCCCCGCC...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGCGGAGACGGCTTCACTaGGGCCCCGGACCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKRRRLH*GPGPVR
Trigger: CCTCACTGGTCCGGGGCCCCAGTGAAGCCGTCTCCG...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGAATCCATCACCGTGGTaGCCAGCGGGGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKNPSPW*PAGSAR
Trigger: CCGGGCGCTCCCCGCTGGCCACCACGGTGATGGATT...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCCCCGGGTCTGGATaGGGTCGCTCGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFPGSG*GRSRRQ
Trigger: CTGCCGCCGCGAGCGACCCCATCCAGACCCGGGGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTATTCCCCGGGTCTGGATaGGGTCGCTCGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLFPGSG*GRSRRQ
Trigger: CTGCCGCCGCGAGCGACCCCATCCAGACCCGGGGAA...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGTTCCCCGGGTCTGGATaGGGTCGCTCGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMFPGSG*GRSRRQ
Trigger: CTGCCGCCGCGAGCGACCCCATCCAGACCCGGGGAA...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCGCTTCCCCGGGTCTaGATGGGGTCGCTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLPLPRV*MGSLAA
Trigger: CGCCGCGAGCGACCCCATCCAGACCCGGGGAAGCGG...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAACCCGGACCGGCTCATaGGCGGGGACAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLTRTGS*AGTTPA
Trigger: AGCGGGTGTTGTCCCCGCTCATGAGCCGGTCCGGGT...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGGACGCAGACGAGACTaGGGCACTGGCGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNGRRRD*GTGGCG
Trigger: GCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAGCTGCGGGAGCCCGTTaGGGCCGAGTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLAAGAR*GRVQGR
Trigger: TCTACCCTGCACTCGGCCTCAACGGGCTCCCGCAGC...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCGGCAGGCCCTCCTTaGGCACGGCGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQAAGPP*ARRPGS
Trigger: GCTACCAGGCCGCCGTGCTCAAGGAGGGCCTGCCGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCCACCGCAGCGGCCTaGGGAGACGGCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSTAAA*GDGFTG
Trigger: CCCAGTGAAGCCGTCTCCGCAGGCCGCTGCGGTGGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGTCCACCGCAGCGGCCTaGGGAGACGGCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMSTAAA*GDGFTG
Trigger: CCCAGTGAAGCCGTCTCCGCAGGCCGCTGCGGTGGA...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACAACACCCGCTGGGTaGCGGGGGCAGCCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTTPAG*RGQPVD
Trigger: ATCCACCGGCTGCCCCCGCCACCCAGCGGGTGTTGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGCGGAGACGGCTTCACTaGGGCCCCGGACCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELRRRLH*GPGPVR
Trigger: CCTCACTGGTCCGGGGCCCCAGTGAAGCCGTCTCCG...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCAGCGGGAATCTTCCTTaGGGACCAGGGCGACGCCTC +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSSGNLP*GPGRRL
Trigger: GAGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCT...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAATCCATCACCGTGGTaGCCAGCGGGGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMNPSPW*PAGSAR
Trigger: CCGGGCGCTCCCCGCTGGCCACCACGGTGATGGATT...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTCGGCAGCGGGGGCGGTaGCCCCAACGGGAAATCCGG +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFRQRGR*PQREIR
Trigger: CCGGATTTCCCGTTGGGGCCACCGCCCCCGCTGCCG...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGCCGCTTCCCCGGGTCTaGATGGGGTCGCTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQPLPRV*MGSLAA
Trigger: CGCCGCGAGCGACCCCATCCAGACCCGGGGAAGCGG...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACGAGACTGAGGCACTaGCGGGTGCGGCCGTCACCG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTRLRH*RVRPSP
Trigger: CGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGACGAGACTGAGGCACTaGCGGGTGCGGCCGTCACCG +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELTRLRH*RVRPSP
Trigger: CGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGT...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGGGGAGGGCGGCGCTaGTCAGCTCCTGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGGGRR*SAPALG
Trigger: GCCAAGGGCAGGAGCTGACCAGCGCCGCCCTCCCCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGGCTCTGCCCGGGACCTaGGGGCGCCAACAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLALPGT*GRQQSV
Trigger: GACACTCTGTTGGCGCCCTCAGGTCCCGGGCAGAGC...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGCTCTGCCCGGGACCTaGGGGCGCCAACAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNALPGT*GRQQSV
Trigger: GACACTCTGTTGGCGCCCTCAGGTCCCGGGCAGAGC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGCTGCGGGAGCCCGTTaGGGCCGAGTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNAAGAR*GRVQGR
Trigger: TCTACCCTGCACTCGGCCTCAACGGGCTCCCGCAGC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCCCGGCCTCAGGTAGTTaGGATAGGGCGGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSPASGS*DRAGRP
Trigger: AGGTCTACCCGCCCTATCTCAACTACCTGAGGCCGG...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTCCCCGGGAACGGACCTaGGGCTGGGCGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFPRERT*GWATQQ
Trigger: CTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGG...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGCCATCGGCGCGTCCTaGTCCACCAGGGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRAIGAS*STRATL
Trigger: CAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGCCATCGGCGCGTCCTaGTCCACCAGGGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAAIGAS*STRATL
Trigger: CAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGAACGGACCTGCGGCTaGGCGACACAGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALERTCG*ATQQWG
Trigger: TCCCCACTGCTGTGTCGCCCAGCCGCAGGTCCGTTC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGACAACACCCGCTGGGTaGCGGGGGCAGCCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLTTPAG*RGQPVD
Trigger: ATCCACCGGCTGCCCCCGCCACCCAGCGGGTGTTGT...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGCGGGGCAGCACTTTATaGGCAGCTGCCGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMRGSTL*AAAVPE
Trigger: CTCCGGGACGGCAGCTGCCCATAAAGTGCTGCCCCG...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATCGGAGACGGCTTCACTaGGGCCCCGGACCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNRRRLH*GPGPVR
Trigger: CCTCACTGGTCCGGGGCCCCAGTGAAGCCGTCTCCG...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGAAATCCATCACCGTGGTaGCCAGCGGGGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRNPSPW*PAGSAR
Trigger: CCGGGCGCTCCCCGCTGGCCACCACGGTGATGGATT...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGGTACGCGTCGTCCTTaGGCTCGGCGTCGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRGTRRP*ARRRAG
Trigger: ACCCGCCCGACGCCGAGCCCAAGGACGACGCGTACC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGGGTACGCGTCGTCCTTaGGCTCGGCGTCGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQGTRRP*ARRRAG
Trigger: ACCCGCCCGACGCCGAGCCCAAGGACGACGCGTACC...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTGGTACGCGTCGTCCTTaGGCTCGGCGTCGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFGTRRP*ARRRAG
Trigger: ACCCGCCCGACGCCGAGCCCAAGGACGACGCGTACC...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGGGAAGGCTGCGGGGTTaGCACCGGCCACAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMGRLRG*HRPQGR
Trigger: CCTACCTTGTGGCCGGTGCCAACCCCGCAGCCTTCC...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGACGAGACTGAGGCACTaGCGGGTGCGGCCGTCACCG +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLTRLRH*RVRPSP
Trigger: CGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGT...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGCTCTGCCCGGGACCTaGGGGCGCCAACAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRALPGT*GRQQSV
Trigger: GACACTCTGTTGGCGCCCTCAGGTCCCGGGCAGAGC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTGCTCTGCCCGGGACCTaGGGGCGCCAACAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFALPGT*GRQQSV
Trigger: GACACTCTGTTGGCGCCCTCAGGTCCCGGGCAGAGC...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGACCCGGACCGGCTCATaGGCGGGGACAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQTRTGS*AGTTPA
Trigger: AGCGGGTGTTGTCCCCGCTCATGAGCCGGTCCGGGT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTACCCGGACCGGCTCATaGGCGGGGACAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVATRTGS*AGTTPA
Trigger: AGCGGGTGTTGTCCCCGCTCATGAGCCGGTCCGGGT...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTACCCGGACCGGCTCATaGGCGGGGACAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFTRTGS*AGTTPA
Trigger: AGCGGGTGTTGTCCCCGCTCATGAGCCGGTCCGGGT...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAGGCGACCCTGGGCGCTaGGAAGCGGGAATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLGDPGR*EAGIFL
Trigger: AAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCC...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGACGAGGCACAGGGTaGACTCCGCGGCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGRGTG*TPRRGK
Trigger: TTTGCCCCGCCGCGGAGTTCACCCTGTGCCTCGTCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGGACGAGGCACAGGGTaGACTCCGCGGCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAGRGTG*TPRRGK
Trigger: TTTGCCCCGCCGCGGAGTTCACCCTGTGCCTCGTCC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTGGACGAGGCACAGGGTaGACTCCGCGGCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFGRGTG*TPRRGK
Trigger: TTTGCCCCGCCGCGGAGTTCACCCTGTGCCTCGTCC...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCTGCGGGAGCCCGTTaGGGCCGAGTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQAAGAR*GRVQGR
Trigger: TCTACCCTGCACTCGGCCTCAACGGGCTCCCGCAGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGGCTGCGGGAGCCCGTTaGGGCCGAGTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQAAGAR*GRVQGR
Trigger: TCTACCCTGCACTCGGCCTCAACGGGCTCCCGCAGC...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCACGTCCGACAGCGACTaGTGGTCCTGCGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSTSDSD*WSCVFS
Trigger: CGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGT...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTTCCACCGCAGCGGCCTaGGGAGACGGCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVASTAAA*GDGFTG
Trigger: CCCAGTGAAGCCGTCTCCGCAGGCCGCTGCGGTGGA...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTCCACCGCAGCGGCCTaGGGAGACGGCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQSTAAA*GDGFTG
Trigger: CCCAGTGAAGCCGTCTCCGCAGGCCGCTGCGGTGGA...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCCAGAGCCCGAGGTTTaGCCTTCAGAAGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALPEPEV*PSEADP
Trigger: CGGGTCCGCTTCTGAAGGGCAAACCTCGGGCTCTGG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCCAGCAGCTGCCGAGTaGGGGCTGCCAATAAGGCGT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALPAAAE*GLPIRR
Trigger: ACGCCTTATTGGCAGCCCGCACTCGGCAGCTGCTGG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGCCAGCAGCTGCCGAGTaGGGGCTGCCAATAAGGCGT +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMPAAAE*GLPIRR
Trigger: ACGCCTTATTGGCAGCCCGCACTCGGCAGCTGCTGG...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGGAAATCCGGGAAGGCTaGGGGGTTGGCACCGGCCAC +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLEIREG*GVGTGH
Trigger: GTGGCCGGTGCCAACCCCGCAGCCTTCCCGGATTTC...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTGCTGGCTCCGTACTaGGGGCGACAGTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLLAPY*GRQSSP
Trigger: CGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGAAGGGTCGGACTTCTaGTGGCTCCGTACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALEGSDF*WLRTAG
Trigger: GCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATTGGGCGACACAGCAGTaGGGATCCGACCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNWATQQ*GSDLGG
Trigger: TCCCCCGAGGTCGGATCCCCACTGCTGTGTCGCCCA...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAAAGGTGTCCGAGGTCTaGCTCCCCGGGAACGGACCT +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLKVSEV*LPGNGP
Trigger: AGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTT...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGGGCGGGGGCAGCCGGTaGATCTTCGGGAAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQGGGSR*IFGKFG
Trigger: CCCGAACTTCCCGAAGATCCACCGGCTGCCCCCGCC...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGGCGGGGGCAGCCGGTaGATCTTCGGGAAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAGGGSR*IFGKFG
Trigger: CCCGAACTTCCCGAAGATCCACCGGCTGCCCCCGCC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGCGGGGCAGCACTTTATaGGCAGCTGCCGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLRGSTL*AAAVPE
Trigger: CTCCGGGACGGCAGCTGCCCATAAAGTGCTGCCCCG...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCGGAGACGGCTTCACTaGGGCCCCGGACCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQRRRLH*GPGPVR
Trigger: CCTCACTGGTCCGGGGCCCCAGTGAAGCCGTCTCCG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATCCACCAGGGCGACCCTaGGCGCTGAGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNPPGRP*ALRSGN
Trigger: ATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGG...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGGAAGGCTGCGGGGTTaGCACCGGCCACAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNGRLRG*HRPQGR
Trigger: CCTACCTTGTGGCCGGTGCCAACCCCGCAGCCTTCC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAGTCCGGCACTTGAGTaGCTGCGGCTGCGACGGCAA +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSPALE*LRLRRQ
Trigger: TTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGCTGCGGACAAGCTTaGGCGCAGCCCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGCGQA*AQPLCL
Trigger: CAGGCACAGGGGCTGCGCCCAAGCTTGTCCGCAGCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGGCGACCCTGGGCGCTaGGAAGCGGGAATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNGDPGR*EAGIFL
Trigger: AAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGGGCGACCCTGGGCGCTaGGAAGCGGGAATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLGDPGR*EAGIFL
Trigger: AAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCC...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAGGACGAGGCACAGGGTaGACTCCGCGGCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGGRGTG*TPRRGK
Trigger: TTTGCCCCGCCGCGGAGTTCACCCTGTGCCTCGTCC...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTGCGGCAGGCCCTCCTTaGGCACGGCGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSAAGPP*ARRPGS
Trigger: GCTACCAGGCCGCCGTGCTCAAGGAGGGCCTGCCGC...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCAGGACCATGCCAGCCTaGCAGCACTTTCTAAGGCGA +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSRTMPA*QHFLRR
Trigger: TCGCCTTAGAAAGTGCTGTCAGGCTGGCATGGTCCT...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526300.5
ENST00000534780.5
CDS-3UTR GCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGCACTTTATGGGCAGCTaGCGTCCCGGAGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELHFMGS*RPGAVS
Trigger: GGAGACAGCTCCGGGACGGCAGCTGCCCATAAAGTG...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGCACTTTATGGGCAGCTaGCGTCCCGGAGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMHFMGS*RPGAVS
Trigger: GGAGACAGCTCCGGGACGGCAGCTGCCCATAAAGTG...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCAGAGCCCGAGGTTTaGCCTTCAGAAGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLPEPEV*PSEADP
Trigger: CGGGTCCGCTTCTGAAGGGCAAACCTCGGGCTCTGG...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGAAATCCGGGAAGGCTaGGGGGTTGGCACCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQEIREG*GVGTGH
Trigger: GTGGCCGGTGCCAACCCCGCAGCCTTCCCGGATTTC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGGAAATCCGGGAAGGCTaGGGGGTTGGCACCGGCCAC +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQEIREG*GVGTGH
Trigger: GTGGCCGGTGCCAACCCCGCAGCCTTCCCGGATTTC...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGCCGCTTTGTACAGGATaGACTCCAGGGTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMPLCTG*TPGSTP
Trigger: CGGGGTCGACCCTGGAGTGCATCCTGTACAAAGCGG...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGAAGGTGTCCGAGGTCTaGCTCCCCGGGAACGGACCT +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLKVSEV*LPGNGP
Trigger: AGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTT...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGAGGGGTCCTGTCCCTaGCAGGGCCGAGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQEGSCP*QGRGKS
Trigger: ACTCTTCCCTCGGCCCTGCCAGGGACAGGACCCCTC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGGAGGGGTCCTGTCCCTaGCAGGGCCGAGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQEGSCP*QGRGKS
Trigger: ACTCTTCCCTCGGCCCTGCCAGGGACAGGACCCCTC...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGAGGGGTCCTGTCCCTaGCAGGGCCGAGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAEGSCP*QGRGKS
Trigger: ACTCTTCCCTCGGCCCTGCCAGGGACAGGACCCCTC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACGGGGCAGCACTTTATaGGCAGCTGCCGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRRGSTL*AAAVPE
Trigger: CTCCGGGACGGCAGCTGCCCATAAAGTGCTGCCCCG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGCCACCAGGGCGACCCTaGGCGCTGAGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQPPGRP*ALRSGN
Trigger: ATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGG...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGCTACAGCGACCGGGGTaGACGAGGCACAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLLQRPG*TRHRVN
Trigger: GTTCACCCTGTGCCTCGTCCACCCCGGTCGCTGTAG...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGAAGGCTGCGGGGTTaGCACCGGCCACAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGRLRG*HRPQGR
Trigger: CCTACCTTGTGGCCGGTGCCAACCCCGCAGCCTTCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGGAAGGCTGCGGGGTTaGCACCGGCCACAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAGRLRG*HRPQGR
Trigger: CCTACCTTGTGGCCGGTGCCAACCCCGCAGCCTTCC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGGTCGGACTTCTGCTaGCTCCGTACTGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGSDFC*LRTAGD
Trigger: GTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGCGACCCTGGGCGCTaGGAAGCGGGAATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGDPGR*EAGIFL
Trigger: AAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAGCGGCAGGCCCTCCTTaGGCACGGCGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTAAGPP*ARRPGS
Trigger: GCTACCAGGCCGCCGTGCTCAAGGAGGGCCTGCCGC...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGACCGGCCTCAGGTAGTTaGGATAGGGCGGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRPASGS*DRAGRP
Trigger: AGGTCTACCCGCCCTATCTCAACTACCTGAGGCCGG...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGCCGGCCTCAGGTAGTTaGGATAGGGCGGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLPASGS*DRAGRP
Trigger: AGGTCTACCCGCCCTATCTCAACTACCTGAGGCCGG...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGGCTCTGGCTGGCTTCTaGATCCGGCCTCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMALAGF*IRPQVV
Trigger: AACTACCTGAGGCCGGATTCAGAAGCCAGCCAGAGC...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACCTGAAGGGGCAAGGTaGCTCCACAGCAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRPEGAR*LHSRAR
Trigger: TCTGGCCCTGCTGTGGAGTCACCTTGCCCCTTCAGG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTCCAGAGCCCGAGGTTTaGCCTTCAGAAGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFPEPEV*PSEADP
Trigger: CGGGTCCGCTTCTGAAGGGCAAACCTCGGGCTCTGG...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCGCTGGTCAGCTCCTaGCCTTGGCCTCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQALVSS*PWPPSC
Trigger: ACAGGATGGAGGCCAAGGGCAGGAGCTGACCAGCGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAGCCCGGGGACCCTTTaGCTTCAGCTCAGTCATGAC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSPGTL*LQLSHD
Trigger: GTCATGACTGAGCTGAAGGCAAAGGGTCCCCGGGCT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTGTCACCCCATCACTaGCAGGGACCCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRLSPHH*QGPSPR
Trigger: CCTGGGGCTGGGTCCCTGGCAGTGATGGGGTGACAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGATGGGCGACACAGCAGTaGGGATCCGACCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGWATQQ*GSDLGG
Trigger: TCCCCCGAGGTCGGATCCCCACTGCTGTGTCGCCCA...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAAGGTGTCCGAGGTCTaGCTCCCCGGGAACGGACCT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQKVSEV*LPGNGP
Trigger: AGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTAAGGTGTCCGAGGTCTaGCTCCCCGGGAACGGACCT +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFKVSEV*LPGNGP
Trigger: AGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTT...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGACGGGGCAGCACTTTATaGGCAGCTGCCGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGRGSTL*AAAVPE
Trigger: CTCCGGGACGGCAGCTGCCCATAAAGTGCTGCCCCG...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGAGCGGGAATCTTCCTTaGGGACCAGGGCGACGCCTC +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQSGNLP*GPGRRL
Trigger: GAGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCT...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACTACAGCGACCGGGGTaGACGAGGCACAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRLQRPG*TRHRVN
Trigger: GTTCACCCTGTGCCTCGTCCACCCCGGTCGCTGTAG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTCTACAGCGACCGGGGTaGACGAGGCACAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVALQRPG*TRHRVN
Trigger: GTTCACCCTGTGCCTCGTCCACCCCGGTCGCTGTAG...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGCTACAGCGACCGGGGTaGACGAGGCACAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQLQRPG*TRHRVN
Trigger: GTTCACCCTGTGCCTCGTCCACCCCGGTCGCTGTAG...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCGGCAGCGGGGGCGGTaGCCCCAACGGGAAATCCGG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRQRGR*PQREIR
Trigger: CCGGATTTCCCGTTGGGGCCACCGCCCCCGCTGCCG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCCGCTTCCCCGGGTCTaGATGGGGTCGCTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINPLPRV*MGSLAA
Trigger: CGCCGCGAGCGACCCCATCCAGACCCGGGGAAGCGG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACCGCTTCCCCGGGTCTaGATGGGGTCGCTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTPLPRV*MGSLAA
Trigger: CGCCGCGAGCGACCCCATCCAGACCCGGGGAAGCGG...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCGTCAGGGGAACTGTaGCTGTCGTTTGTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSSGEL*LSFVPA
Trigger: CGCTGGGACAAACGACAGCCACAGTTCCCCTGACGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGGCACCAAGAGCTGGTaGCCTCGCAGGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINGTKSW*PRRREG
Trigger: GCCCTCCCGCCTGCGAGGTCACCAGCTCTTGGTGCC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAGCTGCCAATAAGGCGTaGTTGAGAGGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLAANKA*LRGRIG
Trigger: GCCTATCCTGCCTCTCAATCACGCCTTATTGGCAGC...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGGACGCAGACGAGACTaGGGCACTGGCGGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINGRRRD*GTGGCG
Trigger: GCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACCGGCCTCAGGTAGTTaGGATAGGGCGGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRPASGS*DRAGRP
Trigger: AGGTCTACCCGCCCTATCTCAACTACCTGAGGCCGG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCCCCGGGAACGGACCTaGGGCTGGGCGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINPRERT*GWATQQ
Trigger: CTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACCCCGGGAACGGACCTaGGGCTGGGCGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTPRERT*GWATQQ
Trigger: CTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGG...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATACGTCCGACAGCGACTaGTGGTCCTGCGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNTSDSD*WSCVFS
Trigger: CGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGT...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCAGCTCTGGAATATaGGCCCTCCACGTCCGACAG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFSSGI*ALHVRQ
Trigger: CTGTCGGACGTGGAGGGCGCATATTCCAGAGCTGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTCACTTTATGGGCAGCTaGCGTCCCGGAGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAHFMGS*RPGAVS
Trigger: GGAGACAGCTCCGGGACGGCAGCTGCCCATAAAGTG...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAGCCATCGGCGCGTCCTaGTCCACCAGGGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTAIGAS*STRATL
Trigger: CAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGC...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGACCAGCAGCTGCCGAGTaGGGGCTGCCAATAAGGCGT +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGPAAAE*GLPIRR
Trigger: ACGCCTTATTGGCAGCCCGCACTCGGCAGCTGCTGG...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCCGCTTTGTACAGGATaGACTCCAGGGTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQPLCTG*TPGSTP
Trigger: CGGGGTCGACCCTGGAGTGCATCCTGTACAAAGCGG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTCCGCTTTGTACAGGATaGACTCCAGGGTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAPLCTG*TPGSTP
Trigger: CGGGGTCGACCCTGGAGTGCATCCTGTACAAAGCGG...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAGACCTCCAAGGACCATaGCAGCCTGACAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLDLQGP*QPDSTF
Trigger: GAAAGTGCTGTCAGGCTGGCATGGTCCTTGGAGGTC...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534780.5
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTAGGCCAGCAGTCCTaGAACAGTCTTCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLGQQS*NSLPDS
Trigger: GGAGTCTGGAAGACTGTTGCAGGACTGCTGGCCTAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATGGGCGACACAGCAGTaGGGATCCGACCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSWATQQ*GSDLGG
Trigger: TCCCCCGAGGTCGGATCCCCACTGCTGTGTCGCCCA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGTCCGACAGCGACTGCTaGTCCTGCGTCTTTTCGTCG +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLSDSDC*SCVFSS
Trigger: CGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGA...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATCCGACAGCGACTGCTaGTCCTGCGTCTTTTCGTCG +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRSDSDC*SCVFSS
Trigger: CGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGA...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCCGCTGTCCTTTTCTaGGGGACTAGAACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSAVLF*GTRTAA
Trigger: GGCAGCAGTTCTAGTCCCCCAGAAAAGGACAGCGGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTACAACACCCGCTGGGTaGCGGGGGCAGCCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSTTPAG*RGQPVD
Trigger: ATCCACCGGCTGCCCCCGCCACCCAGCGGGTGTTGT...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGATTGTGGGCTCTGGCTaGCTTCTGAATCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELIVGSG*LLNPAS
Trigger: TGAGGCCGGATTCAGAAGCCAGCCAGAGCCCACAAT...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTGTATTGTGGGCTCTaGCTGGCTTCTGAATCCGGC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLYCGL*LASESG
Trigger: GCCGGATTCAGAAGCCAGCCAGAGCCCACAATACAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGCTGTATTGTGGGCTCTaGCTGGCTTCTGAATCCGGC +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMLYCGL*LASESG
Trigger: GCCGGATTCAGAAGCCAGCCAGAGCCCACAATACAG...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGTCAGCTCCTGCCCTTaGCCTCCATCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQVSSCP*PPSCRQ
Trigger: CTGACGACAGGATGGAGGCCAAGGGCAGGAGCTGAC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGAACGCCCACTGGCTGTaGGAGAGCAACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLNAHWL*ESNSIQ
Trigger: CTGGATGCTGTTGCTCTCCCACAGCCAGTGGGCGTT...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCATTTGGAACGCCCACTaGCTGTGGGAGAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALIWNAH*LWESNS
Trigger: GCTGTTGCTCTCCCACAGCCAGTGGGCGTTCCAAAT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGATTTGGAACGCCCACTaGCTGTGGGAGAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMIWNAH*LWESNS
Trigger: GCTGTTGCTCTCCCACAGCCAGTGGGCGTTCCAAAT...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGCTCTGGCTTAGGGCTTaGCTTTCATTTGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKLWLRA*LSFGTP
Trigger: GGGCGTTCCAAATGAAAGCCAAGCCCTAAGCCAGAG...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGAGCTGCCAATAAGGCGTaGTTGAGAGGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRAANKA*LRGRIG
Trigger: GCCTATCCTGCCTCTCAATCACGCCTTATTGGCAGC...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCTCTGGCTGGCTTCTaGATCCGGCCTCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQALAGF*IRPQVV
Trigger: AACTACCTGAGGCCGGATTCAGAAGCCAGCCAGAGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGCTCTGGCTGGCTTCTaGATCCGGCCTCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAALAGF*IRPQVV
Trigger: AACTACCTGAGGCCGGATTCAGAAGCCAGCCAGAGC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCCTTCAGCTCAGTCATaGCGACTGGACTCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALPSAQS*RLDSPF
Trigger: AAAAGGGGAGTCCAGTCGTCATGACTGAGCTGAAGG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGACGTCCGACAGCGACTaGTGGTCCTGCGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQTSDSD*WSCVFS
Trigger: CGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTACGTCCGACAGCGACTaGTGGTCCTGCGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFTSDSD*WSCVFS
Trigger: CGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGT...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACCTACTGCTCACCAGTaGTCCCTCCTCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRPTAHQ*SLLSSK
Trigger: CTTGGAGCTGAGGAGGGAGCACTGGTGAGCAGTAGG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTCTGTTACCAGCCAGTaGCAGGAGAACTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALSVTSQ*QENCQA
Trigger: TGCCTGACAGTTCTCCTGGCACTGGCTGGTAACAGA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTCCGACAGCGACTGCTaGTCCTGCGTCTTTTCGTCG +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQSDSDC*SCVFSS
Trigger: CGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGA...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATCCGCTGTCCTTTTCTaGGGGACTAGAACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRSAVLF*GTRTAA
Trigger: GGCAGCAGTTCTAGTCCCCCAGAAAAGGACAGCGGA...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGGCGGGGGCAGCCGGTaGATCTTCGGGAAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINGGGSR*IFGKFG
Trigger: CCCGAACTTCCCGAAGATCCACCGGCTGCCCCCGCC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAGCGGGAATCTTCCTTaGGGACCAGGGCGACGCCTC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSGNLP*GPGRRL
Trigger: GAGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTCCACCAGGGCGACCCTaGGCGCTGAGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSPPGRP*ALRSGN
Trigger: ATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGG...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAATCCATCACCGTGGTaGCCAGCGGGGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINNPSPW*PAGSAR
Trigger: CCGGGCGCTCCCCGCTGGCCACCACGGTGATGGATT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGGGCAGGATAGGCACGTaGATGAAATCCATCACCGTG +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMGRIGT*MKSITV
Trigger: CACGGTGATGGATTTCATCCACGTGCCTATCCTGCC...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAACGAGACTGAGGCACTaGCGGGTGCGGCCGTCACCG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTTRLRH*RVRPSP
Trigger: CGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGT...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGATTGTGGGCTCTGGCTaGCTTCTGAATCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLIVGSG*LLNPAS
Trigger: TGAGGCCGGATTCAGAAGCCAGCCAGAGCCCACAAT...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGGTGTTGAATGTGGCTaGACCGGAGGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRGVECG*TGGIST
Trigger: GGTGGAGATCCCTCCGGTCCAGCCACATTCAACACC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGATTTGGAACGCCCACTaGCTGTGGGAGAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLIWNAH*LWESNS
Trigger: GCTGTTGCTCTCCCACAGCCAGTGGGCGTTCCAAAT...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGGGCTTGGCTTTCATTTaGAACGCCCACTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLGLAFI*NAHWLW
Trigger: CCACAGCCAGTGGGCGTTCCAAATGAAAGCCAAGCC...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTCTGGCTTAGGGCTTaGCTTTCATTTGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLWLRA*LSFGTP
Trigger: GGGCGTTCCAAATGAAAGCCAAGCCCTAAGCCAGAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp TTTGGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTaGCCTTTGGCATCTCCTCACCACGCACGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FGIPPVWNTLLF*PLASPHHARSA
Trigger: AGCAGAACGTGCGTGGTGAGGAGATGCCAAAGGCAAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAAGGACCATGCCAGCCTaGCAGCACTTTCTAAGGCGA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRRTMPA*QHFLRR
Trigger: TCGCCTTAGAAAGTGCTGTCAGGCTGGCATGGTCCT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGAACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRTASAH*RVCRIS
Trigger: GGAGATCCTACAAACACGTCAGTGGGCAGATGCTGT...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAACTCGTGCATGCTGTaGAGCTCTCAGTCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQNSCML*SSQSLA
Trigger: AGCGAGGGACTGAGAGCTTCACAGCATGCACGAGTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCACAGCAGGGCCAGATaGGAAAAGAGCTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQHSRAR*EKSWAY
Trigger: ATAGGCCCAGCTCTTTTCTCATCTGGCCCTGCTGTG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTTTCAGCTCTGGAATATaGGCCCTCCACGTCCGACAG +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAFSSGI*ALHVRQ
Trigger: CTGTCGGACGTGGAGGGCGCATATTCCAGAGCTGAA...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAGAAATCCGGGAAGGCTaGGGGGTTGGCACCGGCCAC +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTEIREG*GVGTGH
Trigger: GTGGCCGGTGCCAACCCCGCAGCCTTCCCGGATTTC...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp GTTGATAGAAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGAACCTCCAAGGACCATaGCAGCCTGACAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: VDRNAVSSTQLLFASNQLNLQGP*QPDSTF
Trigger: GAAAGTGCTGTCAGGCTGGCATGGTCCTTGGAGGTT...CAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526300.5
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCTCGCTGAGTTCCACTaGCCCCTCACTAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQLAEFH*PLTKTL
Trigger: CAGGGTTTTAGTGAGGGGGCAGTGGAACTCAGCGAG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCTCTTCAACCTACTaGTCACCAGTGCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFSSTY*SPVLPP
Trigger: AGGAGGGAGCACTGGTGAGCAGTAGGTTGAAGAGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCATACAGTAAGCTTCTaGCTTCCCAGCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALHTVSF*LPSCCL
Trigger: CAGACAGCAGCTGGGAAGGCAGAAGCTTACTGTATG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTCCGCTGTCCTTTTCTaGGGGACTAGAACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQSAVLF*GTRTAA
Trigger: GGCAGCAGTTCTAGTCCCCCAGAAAAGGACAGCGGA...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCCACCAGGGCGACCCTaGGCGCTGAGAAGCGGGAAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINPPGRP*ALRSGN
Trigger: ATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGGGCAGGATAGGCACGTaGATGAAATCCATCACCGTG +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLGRIGT*MKSITV
Trigger: CACGGTGATGGATTTCATCCACGTGCCTATCCTGCC...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAATTGTGGGCTCTGGCTaGCTTCTGAATCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRIVGSG*LLNPAS
Trigger: TGAGGCCGGATTCAGAAGCCAGCCAGAGCCCACAAT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTATTGTGGGCTCTGGCTaGCTTCTGAATCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAIVGSG*LLNPAS
Trigger: TGAGGCCGGATTCAGAAGCCAGCCAGAGCCCACAAT...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTCTGTATTGTGGGCTCTaGCTGGCTTCTGAATCCGGC +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFLYCGL*LASESG
Trigger: GCCGGATTCAGAAGCCAGCCAGAGCCCACAATACAG...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCCAGCGAGCGGCAAGTaGGGAGCGCAAGAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQPASGK*GAQEKV
Trigger: TACTTTTTCTTGCGCTCCCCACTTGCCGCTCGCTGG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGCTTGGCTTTCATTTaGAACGCCCACTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGLAFI*NAHWLW
Trigger: CCACAGCCAGTGGGCGTTCCAAATGAAAGCCAAGCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACAAGGGACTGGTGTATaGCCAGTGAGGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRQGTGV*PVRTWR
Trigger: TCTCCAGGTCCTCACTGGCCATACACCAGTCCCTTG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAGCTGCCAATAAGGCGTaGTTGAGAGGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGAANKA*LRGRIG
Trigger: GCCTATCCTGCCTCTCAATCACGCCTTATTGGCAGC...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACCATAATGACAGCCTaGTGCTTCATCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTIMTA*CFIPTD
Trigger: ATCTGTGGGGATGAAGCATCAGGCTGTCATTATGGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGACCATAATGACAGCCTaGTGCTTCATCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELTIMTA*CFIPTD
Trigger: ATCTGTGGGGATGAAGCATCAGGCTGTCATTATGGT...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQTASAH*RVCRIS
Trigger: GGAGATCCTACAAACACGTCAGTGGGCAGATGCTGT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVATASAH*RVCRIS
Trigger: GGAGATCCTACAAACACGTCAGTGGGCAGATGCTGT...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTATCCTCAAACTGGGTTTaGCTTCGTAGCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLSSNWV*LRSPSK
Trigger: TTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGA...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGTTGATAGAAACGCTGTaGGCTCGACACAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKLIETL*ARHNSF
Trigger: AAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAA...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCTCTCAGTCCCTCGCTaGGTTCCACTGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLSVPR*VPLPPH
Trigger: GTGAGGGGGCAGTGGAACTCAGCGAGGGACTGAGAG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGGAGAAAGTGGGTGTTaGATGTGGCTGGACCGGAGG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSGESGC*MWLDRR
Trigger: CCTCCGGTCCAGCCACATTCAACACCCACTTTCTCC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGGACCTGGTGAAAAAGTaGATCTCTGGCTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELDLVKK*ISGLGL
Trigger: AAGCCCTAAGCCAGAGATTCACTTTTTCACCAGGTC...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGAGACCACTTGACTACTaGAAGAAGTTGCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLRPLDY*KKLPLA
Trigger: GGCGAGAGGCAACTTCTTTCAGTAGTCAAGTGGTCT...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCAGCCCCTGTGCCTGTaGCCTGAGCTCTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINQPLCL*PELCLG
Trigger: TCCAAGGCAGAGCTCAGGTCACAGGCACAGGGGCTG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACCAGAGCCCGAGGTTTaGCCTTCAGAAGCGGACCCG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTPEPEV*PSEADP
Trigger: CGGGTCCGCTTCTGAAGGGCAAACCTCGGGCTCTGG...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCAAATTCAACACTCAGTaGCCGGGACTGGATAAATGT +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSKFNTQ*PGLDKC
Trigger: ACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTT...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGATCCGCTGTCCTTTTCTaGGGGACTAGAACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGSAVLF*GTRTAA
Trigger: GGCAGCAGTTCTAGTCCCCCAGAAAAGGACAGCGGA...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGGCAGGATAGGCACGTaGATGAAATCCATCACCGTG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQGRIGT*MKSITV
Trigger: CACGGTGATGGATTTCATCCACGTGCCTATCCTGCC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTTGACAAACTCCTGTaGGATCTGCCACATGGTAAG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLDKLL*DLPHGK
Trigger: CTTACCATGTGGCAGATCCCACAGGAGTTTGTCAAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTCTCTGGCTTAGGGCTTaGCTTTCATTTGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVALWLRA*LSFGTP
Trigger: GGGCGTTCCAAATGAAAGCCAAGCCCTAAGCCAGAG...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAACTGGACCTTTCTCCTaGTCAGTTGGAGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRTGPFS*SVGGRH
Trigger: ATGCCTGCCTCCAACTGACCAGGAGAAAGGTCCAGT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp CCCACATTCTCTCTCCCCATCAGGTTTGTGCAAATGTaGTTTGGGATACTCTTCTCTCTTTGGAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTFSLPIRFVQM*FGILFSLWNPS
Trigger: GGAGGGATTCCAAAGAGAGAAGAGTATCCCAAACAACATTTGCACAAACCTGATGGGGAGAGAGAATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGCTGCCAATAAGGCGTaGTTGAGAGGCAGGATAGGC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSAANKA*LRGRIG
Trigger: GCCTATCCTGCCTCTCAATCACGCCTTATTGGCAGC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTGCTCTGGCTGGCTTCTaGATCCGGCCTCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSALAGF*IRPQVV
Trigger: AACTACCTGAGGCCGGATTCAGAAGCCAGCCAGAGC...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGTASAH*RVCRIS
Trigger: GGAGATCCTACAAACACGTCAGTGGGCAGATGCTGT...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGTTGATAGAAACGCTGTaGGCTCGACACAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMLIETL*ARHNSF
Trigger: AAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAA...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGTTGATAGAAACGCTGTaGGCTCGACACAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELLIETL*ARHNSF
Trigger: AAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAA...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGAAGCTAGTTCTCATTaGGAATGCCACCCACACGCA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGREASSH*ECHPHA
Trigger: TGCGTGTGGGTGGCATTCTCAATGAGAACTAGCTTC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGACCTGGTGAAAAAGTaGATCTCTGGCTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNDLVKK*ISGLGL
Trigger: AAGCCCTAAGCCAGAGATTCACTTTTTCACCAGGTC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGCGACTGCTGGTCCTaGGTCTTTTCGTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSDCWS*VFSSEG
Trigger: CCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCACTTTATGGGCAGCTaGCGTCCCGGAGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINHFMGS*RPGAVS
Trigger: GGAGACAGCTCCGGGACGGCAGCTGCCCATAAAGTG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGGTGCTGCCCTTCCATTaGCCTCTTAAAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLVLPFH*PLKEDL
Trigger: AAGGTCTTCTTTAAGAGGGCAATGGAAGGGCAGCAC...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526300.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTTGCCTCAAACCAATTaGCTTGATGAGCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSLPQTN*LDELSN
Trigger: ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAA...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGACCTCCAAGGACCATaGCAGCCTGACAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSDLQGP*QPDSTF
Trigger: GAAAGTGCTGTCAGGCTGGCATGGTCCTTGGAGGTC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATCCAGACTCCACAGCTaGATAAGGCTGCGGACAAGC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSRLHS*IRLRTS
Trigger: GCTTGTCCGCAGCCTTATGCAGCTGTGGAGTCTGGA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTCTGCCTTCCCAGCTaGTGTCTGGTTAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRFCLPS*CLVSGT
Trigger: AGTTCCACTAACCAGACAGCAGCTGGGAAGGCAGAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTTTTCGACCTTCCATTaGCCTCTTAAAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSFSTFH*PLKEDL
Trigger: AAGGTCTTCTTTAAGAGGGCAATGGAAGGTCGAAAA...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528960.5
CDS-3UTR CCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAGGCAGGATAGGCACGTaGATGAAATCCATCACCGTG +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGGRIGT*MKSITV
Trigger: CACGGTGATGGATTTCATCCACGTGCCTATCCTGCC...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATCTCAGTGCCCGGGACTaGATAAATGTATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNLSARD*INVFKQ
Trigger: CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAG...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTAACGCCCACTGGCTGTaGGAGAGCAACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSNAHWL*ESNSIQ
Trigger: CTGGATGCTGTTGCTCTCCCACAGCCAGTGGGCGTT...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACTGTCAGGCACACATaGATAGATGAAGAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTVRHT*IDEESH
Trigger: GTGAGACTCTTCATCTATCCATGTGTGCCTGACAGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCATTAAACAAATCTTCTaGGGTAATGACTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RCELDTTPFCLKPIALMSIKQIF*GNDSKL
Trigger: CAGCTTCGAGTCATTACCTCAGAAGATTTGTTTAAT...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGACCATAATGACAGCCTaGTGCTTCATCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQTIMTA*CFIPTD
Trigger: ATCTGTGGGGATGAAGCATCAGGCTGTCATTATGGT...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGTCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMSSWLT*SLTNSC
Trigger: ACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGA...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGACTCTCTAATGTAGCTTaGCCTCATCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRLSNVA*PHLLKL
Trigger: CAGTTTGAGGAGATGAGGTCAAGCTACATTAGAGAG...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTATGTCTTGACCTGGTaGAAAAGTGAATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALYVLTW*KSESLA
Trigger: AGCCAGAGATTCACTTTTTCACCAGGTCAAGACATA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGTATGTCTTGACCTGGTaGAAAAGTGAATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KRCELDTTPFCLKPIALMYVLTW*KSESLA
Trigger: AGCCAGAGATTCACTTTTTCACCAGGTCAAGACATA...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTATATGTCTTGACCTGGTaGAAAAGTGAATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLYVLTW*KSESLA
Trigger: AGCCAGAGATTCACTTTTTCACCAGGTCAAGACATA...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGTGCTCATTAACAGGTTaGTCAGTGGTGGAATCAACT +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELCSLTG*SVVEST
Trigger: AGTTGATTCCACCACTGATCAACCTGTTAATGAGCA...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGTCGAAAACCTGGCAATaGTTTAGACCACTTGACTAC +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELSKTWQ*FRPLDY
Trigger: GTAGTCAAGTGGTCTAAATCATTGCCAGGTTTTCGA...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTCACACAGTTCATTCTaGGAGGTGTCACTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQSHSSF*EVSLSQ
Trigger: CTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTGACTTCTGATGTGTaGAGGATAAGTATGGATGAG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLTSDV*RISMDE
Trigger: CTCATCCATACTTATCCTTCACACATCAGAAGTCAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTAGCTCCAGCTAACTaGTGGTCTGTAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRLAPAN*WSVRPS
Trigger: AGAAGGCCTTACAGACCATCAGTTAGCTGGAGCTAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTAAAGTCTGCCATGTaGAAATCTCTTCCTATCCCT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLKSAM*KSLPIP
Trigger: AGGGATAGGAAGAGATTTTCACATGGCAGACTTTAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGATAGGGCGTGAGTCATaGGAAAGATTCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQIGRES*ERFPAS
Trigger: AGATGCAGGGAATCTTTCTCATGACTCACGCCCTAT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGTGCTGCCCTTCCATTaGCCTCTTAAAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAVLPFH*PLKEDL
Trigger: AAGGTCTTCTTTAAGAGGGCAATGGAAGGGCAGCAC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526300.5
ENST00000534780.5
CDS-3UTR GCA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGTTGCCTCAAACCAATTaGCTTGATGAGCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKLPQTN*LDELSN
Trigger: ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAA...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGGACACAACTCCTTTTTaGCTCAAACCAATTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELDTTPF*LKPIAL
Trigger: CAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTC...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCGGCACTTGAGTGGCTaGGGCTGCGACGGCAATTTA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRHLSG*GCDGNL
Trigger: TAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTGTGTTGTCATGTCCTaGATAGATCACATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALCVVMS*IDHIWF
Trigger: GAACCAGATGTGATCTATGCAGGACATGACAACACA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCCGACAGCGACTGCTaGTCCTGCGTCTTTTCGTCG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSDSDC*SCVFSS
Trigger: CGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTCTGTATTGTGGGCTCTaGCTGGCTTCTGAATCCGGC +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSLYCGL*LASESG
Trigger: GCCGGATTCAGAAGCCAGCCAGAGCCCACAATACAG...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGCTCAGTGCCCGGGACTaGATAAATGTATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQLSARD*INVFKQ
Trigger: CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAG...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATCCCGACTTTTTCTCTaGCATCAAACTCGTGCATGC +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRSRLFL*HQTRAC
Trigger: GCATGCACGAGTTTGATGCCAGAGAAAAAGTCGGGA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAACGCCCACTGGCTGTaGGAGAGCAACAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINNAHWL*ESNSIQ
Trigger: CTGGATGCTGTTGCTCTCCCACAGCCAGTGGGCGTT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGCAGGTTGATCAGTGGTaGAATCAACTGTATGTCTTG +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELQVDQW*NQLYVL
Trigger: CAAGACATACAGTTGATTCCACCACTGATCAACCTG...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGTTGTCAGCAAAGAACTaGAGGTGTCAGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELLSAKN*RCQVLC
Trigger: ACACAAAACCTGACACCTCCAGTTCTTTGCTGACAA...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAGGCCCAGTTCAGCTTaGATTCATCTTATGGATGTT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALRPSSA*IHLMDV
Trigger: AACATCCATAAGATGAATCCAAGCTGAACTGGGCCT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCTTCCAAAACCCTTCTaGAAAATTAGAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLPKPF*KIREEV
Trigger: GACCTCCTCTCTAATTTTCCAGAAGGGTTTTGGAAG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCCCAGCTGCTGTCTaGTTAGTGGAACTAACAATT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFPAAV*LVELTI
Trigger: AATTGTTAGTTCCACTAACCAGACAGCAGCTGGGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTGGATTTAGTGTGGTaGCAGCTGAGTGGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRLDLVW*QLSGGL
Trigger: TAAGCCTCCACTCAGCTGCCACCACACTAAATCCAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTTCTCCTGGTCAGTTaGAGGCAGGCATATTGCTCT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRFLLVS*RQAYCS
Trigger: AGAGCAATATGCCTGCCTCCAACTGACCAGGAGAAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTGTGTTTTTCTCTTTaGCACTGGACCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLCFSL*HWTFLL
Trigger: CAGGAGAAAGGTCCAGTGCCAAAGAGAAAAACACAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATTCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNSSWLT*SLTNSC
Trigger: ACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGA...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACTCTCTAATGTAGCTTaGCCTCATCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRLSNVA*PHLLKL
Trigger: CAGTTTGAGGAGATGAGGTCAAGCTACATTAGAGAG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGCTCTCTAATGTAGCTTaGCCTCATCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQLSNVA*PHLLKL
Trigger: CAGTTTGAGGAGATGAGGTCAAGCTACATTAGAGAG...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATGCCTCTCGCCTAGTTaGTTAAGACTTGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRCLSPS*LRLVSK
Trigger: TTTGCTGACAAGTCTTAATCAACTAGGCGAGAGGCA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAGACCACTTGACTACTaGAAGAAGTTGCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSRPLDY*KKLPLA
Trigger: GGCGAGAGGCAACTTCTTTCAGTAGTCAAGTGGTCT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGACATTCACTTTTTATaGAAGAGAAGGGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALDIHFL*KRRGFT
Trigger: GGTGAAACCCCTTCTCTTTCATAAAAAGTGAATGTC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGCTACTAGGACTAGATaGGAACTCATTCTAAAACCT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALATRTR*ELILKP
Trigger: AGGTTTTAGAATGAGTTCTCATCTAGTCCTAGTAGC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACATTCAGCTCTGGAATATaGGCCCTCCACGTCCGACAG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTFSSGI*ALHVRQ
Trigger: CTGTCGGACGTGGAGGGCGCATATTCCAGAGCTGAA...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAAACTCCTGTGGGATCTaGCACATGGTAAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRNSCGI*HMVRHN
Trigger: ATTATGCCTTACCATGTGGCAGATCCCACAGGAGTT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGACACAACTCCTTTTTaGCTCAAACCAATTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNDTTPF*LKPIAL
Trigger: CAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGAGAAGGCAAATTACTaGTTGGAAGACTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGREKANY*LEDSGK
Trigger: CTTCCCTGAGTCTTCCAAGCAGTAATTTGCCTTCTC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTTGAATGCTTCTTATaGACATGGCTCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFECFL*TWLWSC
Trigger: ACAACTCCAGAGCCATGTGCATAAGAAGCATTCAAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGACTCAGTGCCCGGGACTaGATAAATGTATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGLSARD*INVFKQ
Trigger: CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAG...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAGGCTTGGCTTTCATTTaGAACGCCCACTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTGLAFI*NAHWLW
Trigger: CCACAGCCAGTGGGCGTTCCAAATGAAAGCCAAGCC...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGGAAAAAGTGAATCTCTaGCTTAGGGCTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLEKVNL*LRAWLS
Trigger: TGAAAGCCAAGCCCTAAGCCAGAGATTCACTTTTTC...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGACAGGTTGATCAGTGGTaGAATCAACTGTATGTCTTG +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRQVDQW*NQLYVL
Trigger: CAAGACATACAGTTGATTCCACCACTGATCAACCTG...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGGCTTTGATGGAACTTaGTTCCATAGAAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRGFDGT*FHRRNP
Trigger: GGGATTCCTTCTATGGAACCAAGTTCCATCAAAGCC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp AGAAAATGTCATTCAACTCTCAGTCAGCAAACACTATaGACCACTTTATATGGCTCCCAGACTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKCHSTLSQQTL*TTLYGSQTPRR
Trigger: TCTCCTGGGAGTCTGGGAGCCATATAAAGTGGTCAATAGTGTTTGCTGACTGAGAGTTGAATGACATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCATTAAACAAATCTTCTaGGGTAATGACTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALIKQIF*GNDSKL
Trigger: CAGCTTCGAGTCATTACCTCAGAAGATTTGTTTAAT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp TTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGAATTGTCCAAGAATACTGAATaGGAGTTATCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LTSSPQTGFDFVALPKELSKNTE*ELSGHQ
Trigger: TTGATGACCAGATAACTCTCATTCAGTATTCTTGGA...CAATTCCTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRSSWLT*SLTNSC
Trigger: ACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGACCTGGTGAAAAAGTaGATCTCTGGCTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSDLVKK*ISGLGL
Trigger: AAGCCCTAAGCCAGAGATTCACTTTTTCACCAGGTC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTGCTCATTAACAGGTTaGTCAGTGGTGGAATCAACT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQCSLTG*SVVEST
Trigger: AGTTGATTCCACCACTGATCAACCTGTTAATGAGCA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTGCTCATTAACAGGTTaGTCAGTGGTGGAATCAACT +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQCSLTG*SVVEST
Trigger: AGTTGATTCCACCACTGATCAACCTGTTAATGAGCA...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGATGCCTCTCGCCTAGTTaGTTAAGACTTGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGCLSPS*LRLVSK
Trigger: TTTGCTGACAAGTCTTAATCAACTAGGCGAGAGGCA...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTCGAAAACCTGGCAATaGTTTAGACCACTTGACTAC +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQSKTWQ*FRPLDY
Trigger: GTAGTCAAGTGGTCTAAATCATTGCCAGGTTTTCGA...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGAAAGGTATGTGAATTaGTACCTCCCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSERYVN*YLPPPP
Trigger: AGGAGGAGGAGGGAGGTATCAATTCACATACCTTTC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAACATCAACTGTTCCCTaGGTCCATCACTTAAGCATA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRTSTVP*VHHLSI
Trigger: TATGCTTAAGTGATGGACTCAGGGAACAGTTGATGT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGCAGAAGAAATTACTTaGATACTTCCAGCCCTAATT +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALAEEIT*ILPALI
Trigger: AATTAGGGCTGGAAGTATTCAAGTAATTTCTTCTGC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGCTCTGCCTTGGAATaGGGTCAACTCCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSSALE*GQLQGG
Trigger: TCCTCCTTGGAGTTGACCTCATTCCAAGGCAGAGCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACACAATCTAGCAGAGTaGCTGGCATACAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSHNLAE*LAYSTV
Trigger: TACTGTGCTGTATGCCAGTCACTCTGCTAGATTGTG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGTGCTGCCCTTCCATTaGCCTCTTAAAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSVLPFH*PLKEDL
Trigger: AAGGTCTTCTTTAAGAGGGCAATGGAAGGGCAGCAC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAAATTCAACACTCAGTaGCCGGGACTGGATAAATGT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQKFNTQ*PGLDKC
Trigger: ACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGAAATTCAACACTCAGTaGCCGGGACTGGATAAATGT +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQKFNTQ*PGLDKC
Trigger: ACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTT...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTGAGTGGCTGCGGCTaGGACGGCAATTTAGTGACA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLSGCG*DGNLVT
Trigger: TGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAGCAACAGCATCCAGTaGTCTCACAACTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGSNSIQ*SHNSDF
Trigger: AAAGTCAGAGTTGTGAGAGCACTGGATGCTGTTGCT...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTTGTGTTGTCATGTCCTaGATAGATCACATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVACVVMS*IDHIWF
Trigger: GAACCAGATGTGATCTATGCAGGACATGACAACACA...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTGTGTTGTCATGTCCTaGATAGATCACATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ISGNSTLSARDWINVFKQCVVMS*IDHIWF
Trigger: GAACCAGATGTGATCTATGCAGGACATGACAACACA...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGGCAAAGAGGACAAATaGCTACATTCTGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRGKEDK*LHSETE
Trigger: TTCAGTCTCAGAATGTAGGCATTTGTCCTCTTTGCC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACTCAGTGCCCGGGACTaGATAAATGTATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSLSARD*INVFKQ
Trigger: CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCAGACATCATTTCTaGAAATTCAACACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFRHHF*KFNTQC
Trigger: GCACTGAGTGTTGAATTTCCAGAAATGATGTCTGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGAAAAAGTGAATCTCTaGCTTAGGGCTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQEKVNL*LRAWLS
Trigger: TGAAAGCCAAGCCCTAAGCCAGAGATTCACTTTTTC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTTGTCAGCAAAGAACTaGAGGTGTCAGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQLSAKN*RCQVLC
Trigger: ACACAAAACCTGACACCTCCAGTTCTTTGCTGACAA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACAGGTTGACATTCCATaGCTACTTACAAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRQVDIP*LLTRHS
Trigger: ACTATGCCTTGTAAGTAGCCATGGAATGTCAACCTG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACAGTTTCACCTTCTTaGCAAAAACCTTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTVSPS*QKPSEQ
Trigger: TTGTTCTGAAGGTTTTTGCCAAGAAGGTGAAACTGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp TTTGGGAAAAACAAACTTATGCCATTACTTGTCTCCTaGTCCACTTCACTTTATCAGTGGGGACCACAGTTG +
Preference number: 4 (lower is better)
Translates to: FGKNKLMPLLVS*STSLYQWGPQL
Trigger: CAACTGTGGTCCCCACTGATAAAGTGAAGTGGACAAGGAGACAAGTAATGGCATAAGTTTGTTTTTCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp GGAATGAGGTCAACTCCAAGGAGGAGAACAAACCCCTaGGTGTTTTTCTTTGCTTTGGTTATAGGATATTCA +
Preference number: 4 (lower is better)
Translates to: GMRSTPRRRTNP*VFFFALVIGYS
Trigger: TGAATATCCTATAACCAAAGCAAAGAAAAACACCAAGGGGTTTGTTCTCCTCCTTGGAGTTGACCTCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTACCATAATGACAGCCTaGTGCTTCATCCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSTIMTA*CFIPTD
Trigger: ATCTGTGGGGATGAAGCATCAGGCTGTCATTATGGT...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATTGATAGAAACGCTGTaGGCTCGACACAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSLIETL*ARHNSF
Trigger: AAAGGAGTTGTGTCGAGCTCACAGCGTTTCTATCAA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAAGACCACTTGACTACTaGAAGAAGTTGCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTRPLDY*KKLPLA
Trigger: GGCGAGAGGCAACTTCTTTCAGTAGTCAAGTGGTCT...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGATGTTAATAAGCTCTaGCCCAAAGGAGCAATTGGC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSDVNKL*PKGAIG
Trigger: GCCAATTGCTCCTTTGGGTCAGAGCTTATTAACATC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGTCAGCAAACACTATTaGCCACTTTATATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSVSKHY*PLYMAP
Trigger: GGGAGCCATATAAAGTGGTCAATAGTGTTTGCTGAC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAACAATAAGGTCAGCATaGCATACAGCAACAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSTIRSA*HTATRA
Trigger: GGCTCTTGTTGCTGTATGTCATGCTGACCTTATTGT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGCAACGGGGGTCTATaGCCAGGCATAACTAACAAG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSNGGL*PGITNK
Trigger: CTTGTTAGTTATGCCTGGTCATAGACCCCCGTTGCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACATAGCAAGAGGAAGTaGGAGGCTTTCATGATTCAG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSHSKRK*EAFMIQ
Trigger: CTGAATCATGAAAGCCTCTCACTTCCTCTTGCTATG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATCCTCAGTTGGTCTTTaGAATCCACAGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSSVGL*NPQKGK
Trigger: CTTGCCTTTCTGTGGATTTCAAAGACCAACTGAGGA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATCAACATTCAGCTTTTaGCTTCCTCAGTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRSTFSF*LPQLVF
Trigger: AAAGACCAACTGAGGAAGTCAAAAGCTGAATGTTGA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATTTCCCACTCAGAAATaGGGAGCAAGGTGTATGACT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSFPTQK*GARCMT
Trigger: AGTCATACACCTTGCTCCTCATTTCTGAGTGGGAAA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCATCAAACTCGTGCATaGTGTGAAGCTCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINHQTRA*CEALSP
Trigger: GGGACTGAGAGCTTCACAGCATGCACGAGTTTGATG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAGCAACAGCATCCAGTaGTCTCACAACTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSNSIQ*SHNSDF
Trigger: AAAGTCAGAGTTGTGAGAGCACTGGATGCTGTTGCT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGACACTAATGCCACACTaGAGAGTTAATAATCTGTGC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQTLMPH*RVNNLC
Trigger: GCACAGATTATTAACTCTGCAGTGTGGCATTAGTGT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGATGATGATATTAGGTaGCCACTAGCACCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRDDDIR*PLAPSF
Trigger: AAAACTAGGTGCTAGTGGGCACCTAATATCATCATC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTCAGACATCATTTCTaGAAATTCAACACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLFRHHF*KFNTQC
Trigger: GCACTGAGTGTTGAATTTCCAGAAATGATGTCTGAA...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATTCAGACATCATTTCTaGAAATTCAACACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GNSTLSARDWINVFKQYRFRHHF*KFNTQC
Trigger: GCACTGAGTGTTGAATTTCCAGAAATGATGTCTGAA...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGATTGTCAGCAAAGAACTaGAGGTGTCAGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PANILGNCAAITSDIISGLSAKN*RCQVLC
Trigger: ACACAAAACCTGACACCTCCAGTTCTTTGCTGACAA...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAGGCAAATTACTGCTTaGAAGACTCAGGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQRQITA*KTQGRF
Trigger: AAATCTTCCCTGAGTCTTCCAAGCAGTAATTTGCCT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGATTTCCCACATCCAATaGCTATTGAACAGGCATACT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQISHIQ*LLNRHT
Trigger: AGTATGCCTGTTCAATAGCCATTGGATGTGGGAAAT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAATAGAAGTACAGTTTaGTGGATAGATACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALNRSTV*WIDTSR
Trigger: CCTTGAAGTATCTATCCACCAAACTGTACTTCTATT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTTCCAAGAATACTGAATaGGAGTTATCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: HNSFLPQTNCLDELSNVASKNTE*ELSGHQ
Trigger: TTGATGACCAGATAACTCTCATTCAGTATTCTTGGA...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCCTCAAACTGGGTTTaGCTTCGTAGCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSSNWV*LRSPSK
Trigger: TTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACATCCTCAAACTGGGTTTaGCTTCGTAGCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTSSNWV*LRSPSK
Trigger: TTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGA...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTCTCTCTAATGTAGCTTaGCCTCATCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSLSNVA*PHLLKL
Trigger: CAGTTTGAGGAGATGAGGTCAAGCTACATTAGAGAG...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGAGGAGAAAGGTATGTaGATTGATACCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINEEKGM*IDTSLL
Trigger: GAGGAGGGAGGTATCAATTCACATACCTTTCTCCTC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGCCTTCAAGTATTTCCTaGTATGTAACCTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQPSSIS*YVTCLL
Trigger: AAGAAGACAGGTTACATATCAGGAAATACTTGAAGG...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAGTGAGAGGCTTTCATaGTTCAGAAGAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSERLS*FRRRKM
Trigger: CATCTTCCTTCTTCTGAATCATGAAAGCCTCTCACT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAAAACACTTGTCAAGCTaGGTAGACTGTTTTCTTATG +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRKHLSS*VDCFLM
Trigger: CATAAGAAAACAGTCTACTCAGCTTGACAAGTGTTT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTCGAAGGTTGAAACATaGATGGAATTTGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQSKVET*MEFVSK
Trigger: CTTTGACACAAATTCCATGCATGTTTCAACCTTCGA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGTATGCTTTCTTAGCTaGCTGATTCACATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRVCFLS*LIHISL
Trigger: TAGAGAAATGTGAATCAGGCAGCTAAGAAAGCATAC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAAAGTCCCAGCACTCTaGAGTGCTGAAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINKVPAL*SAEAER
Trigger: TCTTTCAGCTTCAGCACTGCAGAGTGCTGGGACTTT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGATTCCCTGCATCTCTTaGCAAGTATTAACACTAGTT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQIPCIS*QVLTLV
Trigger: AACTAGTGTTAATACTTGGCAAGAGATGCAGGGAAT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAATGAGAAAGATTCCCTaGATCTCTTGCCAAGTATTA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRMRKIP*ISCQVL
Trigger: TAATACTTGGCAAGAGATGCAGGGAATCTTTCTCAT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTTTCAGACATCATTTCTaGAAATTCAACACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFFRHHF*KFNTQC
Trigger: GCACTGAGTGTTGAATTTCCAGAAATGATGTCTGAA...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACAGGTTGATCAGTGGTaGAATCAACTGTATGTCTTG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSQVDQW*NQLYVL
Trigger: CAAGACATACAGTTGATTCCACCACTGATCAACCTG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCAAAAGCCAAACCTGTaGCCACCACATTCTATTCCC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINQKPNL*PPHSIP
Trigger: GGGAATAGAATGTGGTGGCCACAGGTTTGGCTTTTG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTGAGCATGGGTTTTTaGAGGGGCTGTGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLSMGF*RGCVLV
Trigger: GACTAGAACACAGCCCCTCCAAAAACCCATGCTCAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGGAGAACAAACCCCTTaGTGTTTTTCTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSGEQTP*CFSLLW
Trigger: CCAAAGCAAAGAAAAACACCAAGGGGTTTGTTCTCC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGCCGAGCCCAGCCATaGATTCATACCATCAAATAC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSRAQP*IHTIKY
Trigger: GTATTTGATGGTATGAATCCATGGCTGGGCTCGGCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTTGACTTCCTCAGTTaGTCTTTGAAATCCACAGAA +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRFDFLS*SLKSTE
Trigger: TTCTGTGGATTTCAAAGACCAACTGAGGAAGTCAAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACATGCCTCTCGCCTAGTTaGTTAAGACTTGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTCLSPS*LRLVSK
Trigger: TTTGCTGACAAGTCTTAATCAACTAGGCGAGAGGCA...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTATAGACCTGGACTTTaGGGTTGGACAGACATGCAA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINYRPGL*GWTDMQ
Trigger: TTGCATGTCTGTCCAACCTCAAAGTCCAGGTCTATA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACTCATTCTAAAACCTaGCAGAAGCCTCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTHSKT*QKPPAH
Trigger: ATGTGCTGGAGGCTTCTGTCAGGTTTTAGAATGAGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAATGGATGAGAGAAACTaGTCAGGTATTCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSMDERN*SGIHSK
Trigger: TTTGCTGTGAATACCTGAGCAGTTTCTCTCATCCAT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGTAATGGACAGAGTATaGTTTCTTAGCTGCCTGATT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSVMDRV*FLSCLI
Trigger: AATCAGGCAGCTAAGAAAGCATACTCTGTCCATTAC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAAAGAATTCTAAAGTCTaGCATGTGAAAATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRKNSKV*HVKISS
Trigger: GGAAGAGATTTTCACATGGCAGACTTTAGAATTCTT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGAGGTTGGACAGACATaGAAAGGTAGGGATATAGGT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINEVGQT*KGRDIG
Trigger: ACCTATATCCCTACCTTTGCATGTCTGTCCAACCTC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTGAAAAAGTGAATCTCTaGCTTAGGGCTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSEKVNL*LRAWLS
Trigger: TGAAAGCCAAGCCCTAAGCCAGAGATTCACTTTTTC...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACAAATGTGCACAAAATaGCAGGTAAACTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSQMCTK*QVNSRR
Trigger: TCTCCTAGAGTTTACCTGCCATTTTGTGCACATTTG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATGCTTCTTATGCACATaGCTCTGGAGTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSCFLCT*LWSCKS
Trigger: ACTTTTACAACTCCAGAGCCATGTGCATAAGAAGCA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAGAAGTACAGTTTGGTaGATAGATACTTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQRSTVW*IDTSRY
Trigger: ATACCTTGAAGTATCTATCCACCAAACTGTACTTCT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTTCTCCATATTCCAGTaGGAGTCTTCTAAAATATTC +
Preference number: 4 (lower is better)
Translates to: LNFYSFASVTSQCQENCQFSIFQ*ESSKIF
Trigger: GAATATTTTAGAAGACTCCCACTGGAATATGGAGAA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp ACAGTTTCACCTTCTTGGCAAAAACCTTCAGAACAATaGTCAACATACTCTCAAATGTCTTTCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: TVSPSWQKPSEQ*STYSQMSFPLR
Trigger: TCTGAGTGGGAAAGACATTTGAGAGTATGTTGACAATTGTTCTGAAGGTTTTTGCCAAGAAGGTGAAACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATCCAAGAATACTGAATaGGAGTTATCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSSKNTE*ELSGHQ
Trigger: TTGATGACCAGATAACTCTCATTCAGTATTCTTGGA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCGAAAACCTGGCAATaGTTTAGACCACTTGACTAC +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSKTWQ*FRPLDY
Trigger: GTAGTCAAGTGGTCTAAATCATTGCCAGGTTTTCGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAAGATTTTACAGAAATaGCATTTGGCTGAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSKILQK*HLAESR
Trigger: TCGAGACTCAGCCAAATGTCATTTCTGTAAAATCTT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACAATTTAGGACTTGGTaGACTTTTGCTAGACTATCT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSQFRTW*TFARLS
Trigger: AGATAGTCTAGCAAAAGTTCACCAAGTCCTAAATTG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGGGTGGACAAATTATTaGAGAAAACTGTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSGWTNY*RKLFFP
Trigger: AGGAAAGAACAGTTTTCTTCAATAATTTGTCCACCC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTTTGCCTCAAACCAATTaGCTTGATGAGCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSLPQTN*LDELSN
Trigger: ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAA...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGACACAACTCCTTTTTaGCTCAAACCAATTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINDTTPF*LKPIAL
Trigger: CAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAAAATTCAACACTCAGTaGCCGGGACTGGATAAATGT +
Preference number: 4 (lower is better)
Translates to: ILGNCAAITSDIISGNSTKFNTQ*PGLDKC
Trigger: ACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTT...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAACTGTAACTCAAATGTaGACAAAATGGCAGGTAAAC +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSTVTQM*TKWQVN
Trigger: GTTTACCTGCCATTTTGTGCACATTTGAGTTACAGT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACATTGTTCCCTTTTGTaGAATTGCTGCCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSHCSLL*NCCHSK
Trigger: TTTACTATGGCAGCAATTCCACAAAAGGGAACAATG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACTTGGATTCATCTTATaGATGTTGACTAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSLGFIL*MLTNLA
Trigger: AGCCAGATTAGTCAACATCCATAAGATGAATCCAAG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTATTAAACAAATCTTCTaGGGTAATGACTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSIKQIF*GNDSKL
Trigger: CAGCTTCGAGTCATTACCTCAGAAGATTTGTTTAAT...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTTCCAAGAATACTGAATaGGAGTTATCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: GNCAAITSDIISGNSTLSSKNTE*ELSGHQ
Trigger: TTGATGACCAGATAACTCTCATTCAGTATTCTTGGA...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAAGGATAAGTATGGATaGGAGAAACTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINKDKYG*EKLLRY
Trigger: ATACCTGAGCAGTTTCTCTCATCCATACTTATCCTT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGGGGACCACAGTTGTTaGGCTATTGAATACAAAAAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINGDHSC*AIEYKN
Trigger: ATTTTTGTATTCAATAGCTCAACAACTGTGGTCCCC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR TCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTAGAGAGGAGGTCATaGTCACCTACAATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLERRS*SPTILH
Trigger: ATGAAGAATTGTAGGTGATCATGACCTCCTCTCTAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTGCCTCAAACCAATTaGCTTGATGAGCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLPQTN*LDELSN
Trigger: ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCATTAGTACCTTTGTGCTaGATGGGTATCAGTAAAATT +
Preference number: 4 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSLVPLC*MGISKI
Trigger: AATTTTACTGATACCCATGCAGCACAAAGGTACTAA...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGTGGTACAGATTGTTTaGACAGATAGAATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINVVQIV*TDRILG
Trigger: TCCCAGAATTCTATCTGTCCAAACAATCTGTACCAC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR GCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGTATTGAATAATTTCTaGCATGAACAGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINVLNNF*HEQLLC
Trigger: ACACAGCAGCTGTTCATGGCAGAAATTATTCAATAC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACCCAAAGGAGCAATTaGCAGGAAAGATATTTTACT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTQRSN*QERYFT
Trigger: AGTAAAATATCTTTCCTGCCAATTGCTCCTTTGGGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CCA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTGCTCTGAGGAGAATTaGAATTGTTATAGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: TLVLLISNGVDNFEDCINCSEEN*NCYSGN
Trigger: ATTTCCGCTATAACAATTCCAATTCTCCTCAGAGCA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp TTAAGAGATGTAGAAATTTCCCACATCCAATGGCTATaGAACAGGCATACTTTGGGAAAAACAAACTTATGC +
Preference number: 4 (lower is better)
Translates to: LRDVEISHIQWL*NRHTLGKTNLC
Trigger: GCATAAGTTTGTTTTTCCCAAAGTATGCCTGTTCAATAGCCATTGGATGTGGGAAATTTCTACATCTCTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp CTAGGCCCAGTTCAGCTTGGATTCATCTTATGGATGTaGACTAATCTGGCTTGGATTATATTTTATAATATG +
Preference number: 4 (lower is better)
Translates to: LGPVQLGFILWM*TNLAWIIFYNM
Trigger: CATATTATAAAATATAATCCAAGCCAGATTAGTCAACATCCATAAGATGAATCCAAGCTGAACTGGGCCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
3UTR CAA 72 bp TATTCCAGTGGGAGTCTTCTAAAATATTCATATGAATaGTGCTGCTTTCCTGTTTACAACAGAATCAAGTCT +
Preference number: 4 (lower is better)
Translates to: YSSGSLLKYSYE*CCFPVYNRIKS
Trigger: AGACTTGATTCTGTTGTAAACAGGAAAGCAGCACAATTCATATGAATATTTTAGAAGACTCCCACTGGAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS GCA 90 bp CCGCTCGCGCCCGGCGCCTTGCAGGGCGGCGGCGCGAACGGGCCCTaGTGGGGCGGCGCGCCCTCCGCTTTGTACAGGATGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: PLAPGALQGGGANGP*WGGAPSALYRMHSR
Trigger: CCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGGGCCCGTTCGCGCCGCCGCCCTGCAAGGCGCCGGGCGCGAGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp GGTCTGGCTCCCCGGGAACGGACCTGCGGCTGGGCGACACAGCAGTaGGGATCCGACCTCGGGGGAGGGCGGGCCGCCCGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: GLAPRERTCGWATQQ*GSDLGGGRAARHVG
Trigger: CCCCACGTGGCGGGCGGCCCGCCCTCCCCCGAGGTCGGATCCCCACTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGGAGCCAGACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp CTCGCGCCCGGCGCCTTGCAGGGCGGCGGCGCGAACGGGCCCTGCTaGGGCGGCGCGCCCTCCGCTTTGTACAGGATGCACTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LAPGALQGGGANGPC*GGAPSALYRMHSRV
Trigger: GACCCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGGGCCCGTTCGCGCCGCCGCCCTGCAAGGCGCCGGGCGCGAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp ACCGTGGTGGCCAGCGGGGAGCGCCCGGGCGCCATCGGCGCGTCCTaGTCCACCAGGGCGACCCTGGGCGCTGAGAAGCGGGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: TVVASGERPGAIGAS*STRATLGAEKRESS
Trigger: GGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGCGCCCGGGCGCTCCCCGCTGGCCACCACGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp GCTCCACCAGGGCGACCCTGGGCGCTGAGAAGCGGGAATCTTCCTTaGGGACCAGGGCGACGCCTCCTGCTGCCGCCCCCGGCGGGACAG +
Preference number: 5 (lower is better)
Translates to: APPGRPWALRSGNLP*GPGRRLLLPPPAGQ
Trigger: CTGTCCCGCCGGGGGCGGCAGCAGGAGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp AGCGCCCGGGCGCCATCGGCGCGTCCTGCTCCACCAGGGCGACCCTaGGCGCTGAGAAGCGGGAATCTTCCTTGGGGACCAGGGCGACGC +
Preference number: 5 (lower is better)
Translates to: SARAPSARPAPPGRP*ALRSGNLPWGPGRR
Trigger: GCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGCGCCCGGGCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 90 bp GGGCGCCATCGGCGCGTCCTGCTCCACCAGGGCGACCCTGGGCGCTaGGAAGCGGGAATCTTCCTTGGGGACCAGGGCGACGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GRHRRVLLHQGDPGR*EAGIFLGDQGDASC
Trigger: GCAGGAGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp ACTCCAGGGTCGACCCCGAGGAGGACGCAGACGAGACTGAGGCACTaGCGGGTGCGGCCGTCACCGCCGCTTCCCCGGGTCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: TPGSTPRRTQTRLRH*RVRPSPPLPRVWMG
Trigger: CCCCATCCAGACCCGGGGAAGCGGCGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCCTCCTCGGGGTCGACCCTGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 90 bp CAGGATGCACTCCAGGGTCGACCCCGAGGAGGACGCAGACGAGACTaGGGCACTGGCGGGTGCGGCCGTCACCGCCGCTTCCCCGGGTCT +
Preference number: 5 (lower is better)
Translates to: QDALQGRPRGGRRRD*GTGGCGRHRRFPGS
Trigger: AGACCCGGGGAAGCGGCGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCCTCCTCGGGGTCGACCCTGGAGTGCATCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp CTCCTCCTCAACCTCCACCGCAGCGGCCTGCGGAGACGGCTTCACTaGGGCCCCGGACCAGTGAGGGCTCTCAGAGGCCGGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLLNLHRSGLRRRLH*GPGPVRALRGREQQ
Trigger: CTGCTGCTCCCGGCCTCTGAGAGCCCTCACTGGTCCGGGGCCCCAGTGAAGCCGTCTCCGCAGGCCGCTGCGGTGGAGGTTGAGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp CGAACGGGCCCTGCTGGGGCGGCGCGCCCTCCGCTTTGTACAGGATaGACTCCAGGGTCGACCCCGAGGAGGACGCAGACGAGACTGAGG +
Preference number: 5 (lower is better)
Translates to: RTGPAGAARPPLCTG*TPGSTPRRTQTRLR
Trigger: CCTCAGTCTCGTCTGCGTCCTCCTCGGGGTCGACCCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGGGCCCGTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp GAGCGGGCGGCTGGAAGTCGCTATAGAGAGGGTACGCGTCGTCCTTaGGCTCGGCGTCGGGCGGGTACGCGCAGTCGGGGAAGTCGCCTA +
Preference number: 5 (lower is better)
Translates to: ERAAGSRYREGTRRP*ARRRAGTRSRGSRL
Trigger: TAGGCGACTTCCCCGACTGCGCGTACCCGCCCGACGCCGAGCCCAAGGACGACGCGTACCCTCTCTATAGCGACTTCCAGCCGCCCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp AAAGTGGGTGTTGAATGTGGCTGGACCGGAGGGATCTCCACCTCCTaGGTCGGGGGCGGGGGAGGGCGGCGCTGGTCAGCTCCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: KVGVECGWTGGISTS*VGGGGGRRWSAPAL
Trigger: AAGGGCAGGAGCTGACCAGCGCCGCCCTCCCCCGCCCCCGACCCAGGAGGTGGAGATCCCTCCGGTCCAGCCACATTCAACACCCACTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp GCTCTGGAATATGCGCCCTCCACGTCCGACAGCGACTGCTGGTCCTaGGTCTTTTCGTCGGAGGGGTCCTGTCCCTGGCAGGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ALEYAPSTSDSDCWS*VFSSEGSCPWQGRG
Trigger: CCCTCGGCCCTGCCAGGGACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATATTCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp AGGGAGATAGGTATGGCCGAAACTTCAGGCAAGGTGTCCGAGGTCTaGCTCCCCGGGAACGGACCTGCGGCTGGGCGACACAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: REIGMAETSGKVSEV*LPGNGPAAGRHSSG
Trigger: CCCACTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTTGCCTGAAGTTTCGGCCATACCTATCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp GCTTCAGCTCTGGAATATGCGCCCTCCACGTCCGACAGCGACTGCTaGTCCTGCGTCTTTTCGTCGGAGGGGTCCTGTCCCTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ASALEYAPSTSDSDC*SCVFSSEGSCPWQG
Trigger: GCCCTGCCAGGGACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATATTCCAGAGCTGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp AGCGACTGCTGGTCCTGCGTCTTTTCGTCGGAGGGGTCCTGTCCCTaGCAGGGCCGAGGGAAGAGTAGCCCGTCCAGGGAGATAGGTATG +
Preference number: 5 (lower is better)
Translates to: SDCWSCVFSSEGSCP*QGRGKSSPSREIGM
Trigger: CATACCTATCTCCCTGGACGGGCTACTCTTCCCTCGGCCCTGCCAGGGACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp GGTCAGCTCCTGCCCTTGGCCTCCATCCTGTCGTCAGGGGAACTGTaGCTGTCGTTTGTCCCAGCGAGCGGCAAGTGGGGAGCGCAAGAA +
Preference number: 5 (lower is better)
Translates to: GQLLPLASILSSGEL*LSFVPASGKWGAQE
Trigger: TTCTTGCGCTCCCCACTTGCCGCTCGCTGGGACAAACGACAGCCACAGTTCCCCTGACGACAGGATGGAGGCCAAGGGCAGGAGCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp GTAGCTTCAGCTCTGGAATATGCGCCCTCCACGTCCGACAGCGACTaGTGGTCCTGCGTCTTTTCGTCGGAGGGGTCCTGTCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VASALEYAPSTSDSD*WSCVFSSEGSCPWQ
Trigger: CTGCCAGGGACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATATTCCAGAGCTGAAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp GTCGGACCTCTCGGTACAGCCCATTCCCAGGAAGGGTCGGACTTCTaGTGGCTCCGTACTGCGGGCGACAGTCATCTCCGAAGATCTCAG +
Preference number: 5 (lower is better)
Translates to: VGPLGTAHSQEGSDF*WLRTAGDSHLRRSQ
Trigger: CTGAGATCTTCGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTCCTGGGAATGGGCTGTACCGAGAGGTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp GGACCTCTCGGTACAGCCCATTCCCAGGAAGGGTCGGACTTCTGCTaGCTCCGTACTGCGGGCGACAGTCATCTCCGAAGATCTCAGATC +
Preference number: 5 (lower is better)
Translates to: GPLGTAHSQEGSDFC*LRTAGDSHLRRSQI
Trigger: GATCTGAGATCTTCGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTCCTGGGAATGGGCTGTACCGAGAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp AGAACTGCTGCCTCCAGCACCCCTTGTAGCTTCAGCTCTGGAATATaGGCCCTCCACGTCCGACAGCGACTGCTGGTCCTGCGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RTAASSTPCSFSSGI*ALHVRQRLLVLRLF
Trigger: GAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATATTCCAGAGCTGAAGCTACAAGGGGTGCTGGAGGCAGCAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp TACAGCCCATTCCCAGGAAGGGTCGGACTTCTGCTGGCTCCGTACTaGGGGCGACAGTCATCTCCGAAGATCTCAGATCCCAGTAGTGCG +
Preference number: 5 (lower is better)
Translates to: YSPFPGRVGLLLAPY*GRQSSPKISDPSSA
Trigger: CGCACTACTGGGATCTGAGATCTTCGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTCCTGGGAATGGGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGGGTACGCGTCGTCCTaGGGCTCGGCGTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALGYASS*GSASGG
Trigger: CCCGCCCGACGCCGAGCCCAAGGACGACGCGTACCC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS GCA 90 bp GGAGACGCAGAGTACTCACAAGTCCGGCACTTGAGTGGCTGCGGCTaGGACGGCAATTTAGTGACACGCGGCTCCTTTATCTCCCGACTT +
Preference number: 5 (lower is better)
Translates to: GDAEYSQVRHLSGCG*DGNLVTRGSFISRL
Trigger: AAGTCGGGAGATAAAGGAGCCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS GCA 90 bp AGGACTGGAGACGCAGAGTACTCACAAGTCCGGCACTTGAGTGGCTaGGGCTGCGACGGCAATTTAGTGACACGCGGCTCCTTTATCTCC +
Preference number: 5 (lower is better)
Translates to: RTGDAEYSQVRHLSG*GCDGNLVTRGSFIS
Trigger: GGAGATAAAGGAGCCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp TCCGAGGACTGGAGACGCAGAGTACTCACAAGTCCGGCACTTGAGTaGCTGCGGCTGCGACGGCAATTTAGTGACACGCGGCTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: SEDWRRRVLTSPALE*LRLRRQFSDTRLLY
Trigger: ATAAAGGAGCCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCCAGTCCTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS CCA 90 bp CTCGGGGAGTTCTCCAAGAGAGTTCTCCAACTTCTGTCCGAGGACTaGAGACGCAGAGTACTCACAAGTCCGGCACTTGAGTGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LGEFSKRVLQLLSED*RRRVLTSPALEWLR
Trigger: CCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCCAGTCCTCGGACAGAAGTTGGAGAACTCTCTTGGAGAACTCCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp GCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGGGTACGCGTCGTCCTaGGGCTCGGCGTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: ARHNSFLPQTNCLDELSNGYASS*GSASGG
Trigger: CCCGCCCGACGCCGAGCCCAAGGACGACGCGTACCC...ATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS TCA 90 bp CTTTCGTCTTCCAGCAGCTGCCGAGTGCGGGCTGCCAATAAGGCGTaGTTGAGAGGCAGGATAGGCACGTGGATGAAATCCATCACCGTG +
Preference number: 5 (lower is better)
Translates to: LSSSSSCRVRAANKA*LRGRIGTWMKSITV
Trigger: CACGGTGATGGATTTCATCCACGTGCCTATCCTGCCTCTCAATCACGCCTTATTGGCAGCCCGCACTCGGCAGCTGCTGGAAGACGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGGGTACGCGTCGTCCTaGGGCTCGGCGTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAGYASS*GSASGG
Trigger: CCCGCCCGACGCCGAGCCCAAGGACGACGCGTACCC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTGGGTACGCGTCGTCCTaGGGCTCGGCGTCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFGYASS*GSASGG
Trigger: CCCGCCCGACGCCGAGCCCAAGGACGACGCGTACCC...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCGAGCTGTCTCCAACCTaGCACCCGGACCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: RCELDTTPFCLKPIALMSELSPT*HPDRLM
Trigger: CATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTC...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS GCA 90 bp GGCTCCTTTATCTCCCGACTTTTTCTCTGGCATCAAACTCGTGCATaGTGTGAAGCTCTCAGTCCCTCGCTGAGTTCCACTGCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: GSFISRLFLWHQTRA*CEALSPSLSSTAPS
Trigger: TGAGGGGGCAGTGGAACTCAGCGAGGGACTGAGAGCTTCACAGCATGCACGAGTTTGATGCCAGAGAAAAAGTCGGGAGATAAAGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCCCAGAGCCCGAGGTTaGCCCTTCAGAAGCGGACCC +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALPRARG*PFRSGP
Trigger: GGGTCCGCTTCTGAAGGGCAAACCTCGGGCTCTGGG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGGGCGCGCCCTCCGCTTaGTACAGGATGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: KRCELDTTPFCLKPIALMGAPSA*YRMHSR
Trigger: CCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCC...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS CCA 90 bp TCGTCAGGGGAACTGTGGCTGTCGTTTGTCCCAGCGAGCGGCAAGTaGGGAGCGCAAGAAAAAGTAGTAATTGTTAGGAGATCTCGTCTC +
Preference number: 5 (lower is better)
Translates to: SSGELWLSFVPASGK*GAQEKVVIVRRSRL
Trigger: GAGACGAGATCTCCTAACAATTACTACTTTTTCTTGCGCTCCCCACTTGCCGCTCGCTGGGACAAACGACAGCCACAGTTCCCCTGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGAGCTGTCTCCAACCTaGCACCCGGACCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALELSPT*HPDRLM
Trigger: CATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS CCA 90 bp GGCAATTTAGTGACACGCGGCTCCTTTATCTCCCGACTTTTTCTCTaGCATCAAACTCGTGCATGCTGTGAAGCTCTCAGTCCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: GNLVTRGSFISRLFL*HQTRACCEALSPSL
Trigger: CAGCGAGGGACTGAGAGCTTCACAGCATGCACGAGTTTGATGCCAGAGAAAAAGTCGGGAGATAAAGGAGCCGCGTGTCACTAAATTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGGAGCTGTCTCCAACCTaGCACCCGGACCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLELSPT*HPDRLM
Trigger: CATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTC...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGAAGCGGGAATCTTCCTaGGGGACCAGGGCGACGCCT +
Preference number: 5 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLKRESS*GTRATP
Trigger: AGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTT...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGGCGCGCCCTCCGCTTaGTACAGGATGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRGAPSA*YRMHSR
Trigger: CCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTGGCGCGCCCTCCGCTTaGTACAGGATGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAGAPSA*YRMHSR
Trigger: CCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCC...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTGGCGCGCCCTCCGCTTaGTACAGGATGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFGAPSA*YRMHSR
Trigger: CCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCC...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp TGTAGCTTGACCTCATCTCCTCAAACTGGGTTTGACTTCGTAGCCCTTCCAAAGGGGCTTGGCTTTCATTaGGAACGCCCACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CSLTSSPQTGFDFVALPKGLGFH*ERPLAV
Trigger: CACAGCCAGTGGGCGTTCCAAATGAAAGCCAAGCCC...CTTTGGAAGGGCTACGAAGTCAAACCCAGTTTGAGGAGATGAGGTCAAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS TCA 90 bp CTTTATCTCCCGACTTTTTCTCTGGCATCAAACTCGTGCATGCTGTaGAGCTCTCAGTCCCTCGCTGAGTTCCACTGCCCCCTCACTAAA +
Preference number: 5 (lower is better)
Translates to: LYLPTFSLASNSCML*SSQSLAEFHCPLTK
Trigger: TTTAGTGAGGGGGCAGTGGAACTCAGCGAGGGACTGAGAGCTTCACAGCATGCACGAGTTTGATGCCAGAGAAAAAGTCGGGAGATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGGAGCTGTCTCCAACCTaGCACCCGGACCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: ISGNSTLSARDWINVFKQELSPT*HPDRLM
Trigger: CATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTC...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTAAGCGGGAATCTTCCTaGGGGACCAGGGCGACGCCT +
Preference number: 5 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAKRESS*GTRATP
Trigger: AGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTT...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS CCA 90 bp GCCTTGAGGAGAATTAGAGAAAGTTGTGGTGATGTGATATCAGGCTaGATTCAGCCCCACCTGCTTTGTGCCAGGCAAGGGCTACTTATC +
Preference number: 5 (lower is better)
Translates to: ALRRIRESCGDVISG*IQPHLLCARQGLLI
Trigger: GATAAGTAGCCCTTGCCTGGCACAAAGCAGGTGGGGCTGAATCCAGCCTGATATCACATCACCACAACTTTCTCTAATTCTCCTCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS-3UTR CAA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGGGGCTTGGCTTTCATTaGGAACGCCCACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLGLGFH*ERPLAV
Trigger: CACAGCCAGTGGGCGTTCCAAATGAAAGCCAAGCCC...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS TCA 90 bp TTCAGCCCCACCTGCTTTGTGCCAGGCAAGGGCTACTTATCAGTATaGAGTAGCTGTTTAGCCAAGGGAAGGCTGATACCTGCAATTATC +
Preference number: 5 (lower is better)
Translates to: FSPTCFVPGKGYLSV*SSCLAKGRLIPAII
Trigger: GATAATTGCAGGTATCAGCCTTCCCTTGGCTAAACAGCTACTTCATACTGATAAGTAGCCCTTGCCTGGCACAAAGCAGGTGGGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAAGCGGGAATCTTCCTaGGGGACCAGGGCGACGCCT +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSKRESS*GTRATP
Trigger: AGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAACTGTGGCTGTCGTTaGTCCCAGCGAGCGGCAAGT +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQNCGCR*SQRAAS
Trigger: ACTTGCCGCTCGCTGGGACAAACGACAGCCACAGTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGGCTGCGGACAAGCTaGGGCGCAGCCCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRLRTS*GAAPVP
Trigger: AGGCACAGGGGCTGCGCCCAAGCTTGTCCGCAGCCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAGGAGAAAGTGGGTGTaGAATGTGGCTGGACCGGAG +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQRRKWV*NVAGPE
Trigger: CTCCGGTCCAGCCACATTCAACACCCACTTTCTCCT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCACAAGTCCGGCACTaGAGTGGCTGCGGCTGCGAC +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSQVRH*SGCGCD
Trigger: GTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGGGCTTGGCTTTCATTaGGAACGCCCACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSGLGFH*ERPLAV
Trigger: CACAGCCAGTGGGCGTTCCAAATGAAAGCCAAGCCC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTGGAGGTGTCAGGTTTaGTGTTGTCATGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALWRCQV*CCHVLH
Trigger: ATGCAGGACATGACAACACAAAACCTGACACCTCCA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCACCTGGACTTTGAGGTaGGACAGACATGCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALTWTLR*DRHAKV
Trigger: TACCTTTGCATGTCTGTCCAACCTCAAAGTCCAGGT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS TCA 90 bp CGGGTTGTAGATTTCACTCAAATGACAAGTGAAGCTAGTTCTCATTaGGAATGCCACCCACACGCACAAATACAACAAGGCTTACCCCGA +
Preference number: 5 (lower is better)
Translates to: RVVDFTQMTSEASSH*ECHPHAQIQQGLPR
Trigger: TCGGGGTAAGCCTTGTTGTATTTGTGCGTGTGGGTGGCATTCTCAATGAGAACTAGCTTCACTTGTCATTTGAGTGAAATCTACAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS-3UTR CAA 90 bp CGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCGCAGTACAGATGAAGTaGTTTGACAAGATCATGCAA +
Preference number: 5 (lower is better)
Translates to: RCELDTTPFCLKPIALMSAVQMK*FDKIMQ
Trigger: TTGCATGATCTTGTCAAACAACTTCATCTGTACTGC...GCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp AACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTGGAGGTGTCAGGTTTaGTGTTGTCATGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: NTQCPGLDKCIQAVQMKLWRCQV*CCHVLH
Trigger: ATGCAGGACATGACAACACAAAACCTGACACCTCCA...CAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS GCA 90 bp TTCATTTGGAACGCCCACTGGCTGTGGGAGAGCAACAGCATCCAGTaGTCTCACAACTCTGACTTTATTGAACTTTTTAAATTTTCGACC +
Preference number: 5 (lower is better)
Translates to: FIWNAHWLWESNSIQ*SHNSDFIELFKFST
Trigger: GGTCGAAAATTTAAAAAGTTCAATAAAGTCAGAGTTGTGAGAGCACTGGATGCTGTTGCTCTCCCACAGCCAGTGGGCGTTCCAAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
ENST00000632634.1
CDS-3UTR CAA 90 bp GGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGAACAGAGGAACTCTTCTaGGCTAACTTGAAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: GNSTLSARDWINVFKQYRTEELF*ANLKLD
Trigger: GTCAAGCTTCAAGTTAGCCAAGAAGAGTTCCTCTGT...TCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTTGGAGGTGTCAGGTTTaGTGTTGTCATGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAWRCQV*CCHVLH
Trigger: ATGCAGGACATGACAACACAAAACCTGACACCTCCA...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCCCATTACTTGTCTCCTaGTCCACTTCACTTTATCAG +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALPLLVS*STSLYQ
Trigger: CTGATAAAGTGAAGTGGACAAGGAGACAAGTAATGG...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAACTTATGCCATTACTaGTCTCCTTGTCCACTTCAC +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALNLCHY*SPCPLH
Trigger: GTGAAGTGGACAAGGAGACAAGTAATGGCATAAGTT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCCTCAGTTGGTCTTaGAAATCCACAGAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFLSWS*KSTERQ
Trigger: TTGCCTTTCTGTGGATTTCAAAGACCAACTGAGGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATTTTACAGCTTTGCATaGTCACCCCATCACTGCCAG +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRFYSFA*SPHHCQ
Trigger: CTGGCAGTGATGGGGTGACAATGCAAAGCTGTAAAA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS TCA 90 bp ATGCTCATTAACAGGTTGATCAGTGGTGGAATCAACTGTATGTCTTaGCCTGGTGAAAAAGTGAATCTCTGGCTTAGGGCTTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: MLINRLISGGINCMS*PGEKVNLWLRAWLS
Trigger: TGAAAGCCAAGCCCTAAGCCAGAGATTCACTTTTTCACCAGGTCAAGACATACAGTTGATTCCACCACTGATCAACCTGTTAATGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
ENST00000632634.1
CDS TCA 90 bp GATTTAGACCACTTGACTACTGAAAGAAGTTGCCTCTCGCCTAGTTaGTTAAGACTTGTCAGCAAAGAACTGGAGGTGTCAGGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: DLDHLTTERSCLSPS*LRLVSKELEVSGFV
Trigger: CACAAAACCTGACACCTCCAGTTCTTTGCTGACAAGTCTTAATCAACTAGGCGAGAGGCAACTTCTTTCAGTAGTCAAGTGGTCTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
CDS GCA 90 bp TTTAGCCAAGGGAAGGCTGATACCTGCAATTATCTAAGCAGAGGTTaGAATCTGCTGGCTCTAGTATCTGATCATGCCCATAGATACATT +
Preference number: 5 (lower is better)
Translates to: FSQGKADTCNYLSRG*NLLALVSDHAHRYI
Trigger: AATGTATCTATGGGCATGATCAGATACTAGAGCCAGCAGATTGCAACCTCTGCTTAGATAATTGCAGGTATCAGCCTTCCCTTGGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS-3UTR CAA 90 bp ATTTCTGGAAATTCAACACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGCGACACAACTCCTTTTaGCCTCAAACCAATTGCCTT +
Preference number: 5 (lower is better)
Translates to: ISGNSTLSARDWINVFKQRHNSF*PQTNCL
Trigger: AAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCG...CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCATTACAAAGCACTaGGGAAAGGCAGGTTTAATC +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFITKH*GKAGLI
Trigger: GATTAAACCTGCCTTTCCCAAGTGCTTTGTAATGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGACACATCCAATGGCTATaGAACAGGCATACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRHIQWL*NRHTLG
Trigger: TCCCAAAGTATGCCTGTTCAATAGCCATTGGATGTG...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCGAGAAACAGAGATTGTaGTTTTCACTCAGCCATGAA +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALEKQRL*FSLSHE
Trigger: TTCATGGCTGAGTGAAAACAACAATCTCTGTTTCTC...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAATACTCTTCTCTTCTaGCCTTTGGCATCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQNTLLF*PLASPH
Trigger: GTGAGGAGATGCCAAAGGCAAGAAGAGAAGAGTATT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS TCA 90 bp GTTCATTTAGTATTAGATCAGGTGCAAAATACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCCATCCTAGACCAAACACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: VHLVLDQVQNTASAH*RVCRISILDQTPLS
Trigger: GCTTAATGGTGTTTGGTCTAGGATGGAGATCCTACAAACACGTCAGTGGGCAGATGCTGTATTTTGCACCTGATCTAATACTAAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000533207.5
ENST00000534013.5
CDS TCA 90 bp AGAAGTAACAATACTTTCATACAGAGGAACTCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGTGGGATCTGCCACATGGTAAGGCAT +
Preference number: 5 (lower is better)
Translates to: RSNNTFIQRNSSWLT*SLTNSCGICHMVRH
Trigger: ATGCCTTACCATGTGGCAGATCCCACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGAGTTCCTCTGTATGAAAGTATTGTTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000530764.1
ENST00000533207.5
ENST00000534013.5
CDS TCA 90 bp CATGTCCTGCATAGATCACATCTGGTTCAATGCTCATTAACAGGTTaGTCAGTGGTGGAATCAACTGTATGTCTTGACCTGGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: HVLHRSHLVQCSLTG*SVVESTVCLDLVKK
Trigger: CTTTTTCACCAGGTCAAGACATACAGTTGATTCCACCACTGATCAACCTGTTAATGAGCATTGAACCAGATGTGATCTATGCAGGACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
CDS-3UTR CAA 90 bp ACTCAGTGCCCGGGACTGGATAAATGTATTCAAGCAGTACAGATGAAGTTGTTTATCCCTGCCAATATCTaGGGTAATTGTGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: TQCPGLDKCIQAVQMKLFIPANI*GNCAAI
Trigger: TATTGCTGCACAATTACCCAAGATATTGGCAGGGAT...AAACAACTTCATCTGTACTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp CACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAATGTAGCTATGCTCATTAACAGGTaGATCAGTGGTGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: HNSFLPQTNCLDELSNVAMLINR*ISGGIN
Trigger: GTTGATTCCACCACTGATCAACCTGTTAATGAGCAT...AGCTACATTAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCAATGATTTAGACCACTaGACTACTGAAAGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALNDLDH*TTERSC
Trigger: GCAACTTCTTTCAGTAGTCAAGTGGTCTAAATCATT...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp AAACGCTGTGAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAATGATTTAGACCACTaGACTACTGAAAGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: KRCELDTTPFCLKPIALMNDLDH*TTERSC
Trigger: GCAACTTCTTTCAGTAGTCAAGTGGTCTAAATCATT...CATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTCACAGCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp GAGCTCGACACAACTCCTTTTTGCCTCAAACCAATTGCCTTGATGAGCTCTCTAAATGATTTAGACCACTaGACTACTGAAAGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: ELDTTPFCLKPIALMSSLNDLDH*TTERSC
Trigger: GCAACTTCTTTCAGTAGTCAAGTGGTCTAAATCATT...TAGAGAGCTCATCAAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCGAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAGAAAGGTATGTGAATaGATACCTCCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSRKVCE*IPPSSS
Trigger: GGAGGAGGAGGGAGGTATCAATTCACATACCTTTCT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGAAGGCAAATTACTGCTaGGAAGACTCAGGGAAGATT +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQKANYC*EDSGKI
Trigger: AATCTTCCCTGAGTCTTCCAAGCAGTAATTTGCCTT...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAAGTCAGCAAACACTATaGACCACTTTATATGGCTCC +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRSQQTL*TTLYGS
Trigger: GGAGCCATATAAAGTGGTCAATAGTGTTTGCTGACT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTCATCTTATGGATGTaGACTAATCTGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALFILWM*TNLAWI
Trigger: AATCCAAGCCAGATTAGTCAACATCCATAAGATGAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCTTTTAAGGCCACATaGATTCTAGGCCGAACTTTA +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQAFKAT*ILGRTL
Trigger: TAAAGTTCGGCCTAGAATCAATGTGGCCTTAAAAGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTGGAATCCCTCCTGTTaGGAATACTCTTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQWNPSC*EYSSLL
Trigger: AAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATGAGGAATGTGCTAAGCCAGCAAGAAATGGAAGTTAGCAAAGTCCCAGCACTCTTGTGCAAATGTTGTTaGGGATACTCTTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: MRNVLSQQEMEVSKVPALLCKCC*GYSSLF
Trigger: AAAGAGAGAAGAGTATCCCAAACAACATTTGCACAA...GAGTGCTGGGACTTTGCTAACTTCCATTTCTTGCTGGCTTAGCACATTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTTTGTGTTTTTCTCTTaGGCACTGGACCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQFVFFS*ALDLSP
Trigger: AGGAGAAAGGTCCAGTGCCAAAGAGAAAAACACAAA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGATTCCCTGCATCTCTaGCCAAGTATTAACACTAGT +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRDSLHL*PSINTS
Trigger: ACTAGTGTTAATACTTGGCAAGAGATGCAGGGAATC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS TCA 90 bp ATTCATTTAGTATTAGATCAGGTGCAAAATACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCCATCCTAGACCAAACACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: IHLVLDQVQNTASAH*RVCRISILDQTPLS
Trigger: GCTTAATGGTGTTTGGTCTAGGATGGAGATCCTACAAACACGTCAGTGGGCAGATGCTGTATTTTGCACCTGATCTAATACTAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528960.5
ENST00000534780.5
ENST00000619228.2
CDS TCA 90 bp AATCATTTAGTATTAGATCAGGTGCAAAATACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCCATCCTAGACCAAACACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: NHLVLDQVQNTASAH*RVCRISILDQTPLS
Trigger: GCTTAATGGTGTTTGGTCTAGGATGGAGATCCTACAAACACGTCAGTGGGCAGATGCTGTATTTTGCACCTGATCTAATACTAAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526300.5
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAACAGAGGAACTCTTCTaGGCTAACTTGAAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSTEELF*ANLKLD
Trigger: GTCAAGCTTCAAGTTAGCCAAGAAGAGTTCCTCTGT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGGCAGTACAGATGAAGTaGTTTGACAAGATCATGCAA +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQAVQMK*FDKIMQ
Trigger: TTGCATGATCTTGTCAAACAACTTCATCTGTACTGC...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CCTGCCAATATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAATCCCTGCCAATATCTaGGGTAATTGTGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: PANILGNCAAITSDIISGIPANI*GNCAAI
Trigger: TATTGCTGCACAATTACCCAAGATATTGGCAGGGAT...TCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGATATTGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp CTTAATTTTTACAGTTTTGCATCTGTTACCAGCCAGTGCCAGGAGAACTGTCAGTTAAAGTTAGTACCTTaGTGCTGCATGGGTATCAGT +
Preference number: 5 (lower is better)
Translates to: LNFYSFASVTSQCQENCQLKLVP*CCMGIS
Trigger: ACTGATACCCATGCAGCACAAAGGTACTAACTTTAA...CTGACAGTTCTCCTGGCACTGGCTGGTAACAGATGCAAAACTGTAAAAATTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGAGCAGTTAAATGACTaGCTTAATCTCATCCAGCTA +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGREQLND*LNLIQL
Trigger: TAGCTGGATGAGATTAAGCAAGTCATTTAACTGCTC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGGACTTGGTGAACTTTaGCTAGACTATCTGGCTATG +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSGLGEL*LDYLAM
Trigger: CATAGCCAGATAGTCTAGCAAAAGTTCACCAAGTCC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGATGGGTGAAGAGTCAGTaGTTTTACTGCTTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRWVKSQ*FYCFLF
Trigger: GAACAAAAAGCAGTAAAACAACTGACTCTTCACCCA...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGATACTCTTCTCTCTTaGGAATCCCTCCTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSDTLLS*ESLLFG
Trigger: TCCAAACAGGAGGGATTCCAAAGAGAGAAGAGTATC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAAGGTTTGTGCAAATGTaGTTTGGGATACTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRRFVQM*FGILFS
Trigger: AGAGAAGAGTATCCCAAACAACATTTGCACAAACCT...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ATTTTCTTGTGTCACACAGTTCATTCTGAGAGGTGTCACTCTCACAGAGGTAGAGCTTTTAAATGGGCTTaGATGGAACTTGGTTCCATA +
Preference number: 5 (lower is better)
Translates to: IFLCHTVHSERCHSHRGRAFKWA*MELGSI
Trigger: TATGGAACCAAGTTCCATCAAAGCCCATTTAAAAGC...TCTACCTCTGTGAGAGTGACACCTCTCAGAATGAACTGTGTGACACAAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAATCCCTGCCAATATCTaGGGTAATTGTGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSIPANI*GNCAAI
Trigger: TATTGCTGCACAATTACCCAAGATATTGGCAGGGAT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAATGCTCATTAACAGGTaGATCAGTGGTGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSMLINR*ISGGIN
Trigger: GTTGATTCCACCACTGATCAACCTGTTAATGAGCAT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCTCTCCCCATCAGGTTaGTGCAAATGTTGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLSPSG*CKCCLG
Trigger: TCCCAAACAACATTTGCACAAACCTGATGGGGAGAG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAGACAGTTTCACCTTCTaGGCAAAAACCTTCAGAACA +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSDSFTF*AKTFRT
Trigger: TGTTCTGAAGGTTTTTGCCAAGAAGGTGAAACTGTC...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCGACACAACTCCTTTTaGCCTCAAACCAATTGCCTT +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRHNSF*PQTNCL
Trigger: AAGGCAATTGGTTTGAGGCAAAAAGGAGTTGTGTCG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTATGCTCATTAACAGGTaGATCAGTGGTGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: GNCAAITSDIISGNSTLSMLINR*ISGGIN
Trigger: GTTGATTCCACCACTGATCAACCTGTTAATGAGCAT...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACACCCATTGTTCCCTTTaGTGGAATTGCTGCCATAGT +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINTHCSL*WNCCHS
Trigger: ACTATGGCAGCAATTCCACAAAAGGGAACAATGGGT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCAAATACCCAAACCACTTaGAAAGTATGTGCTCAACTG +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSNTQTT*KVCAQL
Trigger: CAGTTGAGCACATACTTTCAAAGTGGTTTGGGTATT...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp GGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACACTCAGTGCAGTACAGATGAAGTaGTTTGACAAGATCATGCAA +
Preference number: 5 (lower is better)
Translates to: GNCAAITSDIISGNSTLSAVQMK*FDKIMQ
Trigger: TTGCATGATCTTGTCAAACAACTTCATCTGTACTGC...ACTGAGTGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ATCTTGGGTAATTGTGCAGCAATAACTTCAGACATCATTTCTGGAAATTCAACAATCCCTGCCAATATCTaGGGTAATTGTGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: ILGNCAAITSDIISGNSTIPANI*GNCAAI
Trigger: TATTGCTGCACAATTACCCAAGATATTGGCAGGGAT...TGTTGAATTTCCAGAAATGATGTCTGAAGTTATTGCTGCACAATTACCCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACAGGAGAACAAACCCCTaGGTGTTTTTCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINRRTNP*VFFFAL
Trigger: CAAAGCAAAGAAAAACACCAAGGGGTTTGTTCTCCT...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp CAATGGAAGAGTGATAGGCTCTTTAGAACTTTGATAAAACAGGCCCTAAACTCACATCTGGCCTTGTGTTaGACAATTTATATGGTGTAT +
Preference number: 5 (lower is better)
Translates to: QWKSDRLFRTLIKQALNSHLALC*TIYMVY
Trigger: ATACACCATATAAATTGTCAAACACAAGGCCAGATG...TGAGTTTAGGGCCTGTTTTATCAAAGTTCTAAAGAGCCTATCACTCTTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACGTGGAGTGGTACAGATaGTTTGGACAGATAGAATTC +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINVEWYR*FGQIEF
Trigger: GAATTCTATCTGTCCAAACAATCTGTACCACTCCAC...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTCAAGCCTTTTATGCTaGCCTGTAAAGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINSSLLC*PVKSAT
Trigger: TGTTGCAGACTTTACAGGCAAGCATAAAAGGCTTGA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACCTAGTTTTTACAGCTTaGCATTGTCACCCCATCACT +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLVFTA*HCHPIT
Trigger: AGTGATGGGGTGACAATGCAAAGCTGTAAAAACTAG...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS TCA 90 bp AGAAGTAACAATACTTTCATACAGAGGAACTCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGTGGGATTCATTTAGTATTAGATCAG +
Preference number: 5 (lower is better)
Translates to: RSNNTFIQRNSSWLT*SLTNSCGIHLVLDQ
Trigger: CTGATCTAATACTAAATGAATCCCACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGAGTTCCTCTGTATGAAAGTATTGTTACTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS-3UTR CAA 90 bp ACACTAGTTTTACTAATAAGCAACGGGGTAGATAACTTTGAAGATTGCATCAACTTAGTGGCAAAAAGCTaGAAACCACTGCTGTCTAAA +
Preference number: 5 (lower is better)
Translates to: TLVLLISNGVDNFEDCINLVAKS*KPLLSK
Trigger: TTTAGACAGCAGTGGTTTCAAGCTTTTTGCCACTAA...GTTGATGCAATCTTCAAAGTTATCTACCCCGTTGCTTATTAGTAAAACTAGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325455.10
CDS GCA 72 bp GCCAGCGGGGAGCGCCCGGGCGCCATCGGCGCGTCCTaGTCCACCAGGGCGACCCTGGGCGCTGAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: ASGERPGAIGAS*STRATLGAEKR
Trigger: CCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGCGCCCGGGCGCTCCCCGCTGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp CTGGTAGCCGAGCTGCGGGAGCCCGTTGAGGCCGAGTaGAGGGTAGAGCGCGGGGGCCGCCCCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LVAELREPVEAE*RVERGGRPGGG
Trigger: GCCGCCGCCGGGGCGGCCCCCGCGCTCTACCCTGCACTCGGCCTCAACGGGCTCCCGCAGCTCGGCTACCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp GCACGGCGGCCTGGTAGCCGAGCTGCGGGAGCCCGTTaGGGCCGAGTGCAGGGTAGAGCGCGGGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: ARRPGSRAAGAR*GRVQGRARGPP
Trigger: GGGCGGCCCCCGCGCTCTACCCTGCACTCGGCCTCAACGGGCTCCCGCAGCTCGGCTACCAGGCCGCCGTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp CCCGGCGCCTTGCAGGGCGGCGGCGCGAACGGGCCCTaGTGGGGCGGCGCGCCCTCCGCTTTGTACAGGATG +
Preference number: 6 (lower is better)
Translates to: PGALQGGGANGP*WGGAPSALYRM
Trigger: CATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGGGCCCGTTCGCGCCGCCGCCCTGCAAGGCGCCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GGCGCCTTGCAGGGCGGCGGCGCGAACGGGCCCTGCTaGGGCGGCGCGCCCTCCGCTTTGTACAGGATGCAC +
Preference number: 6 (lower is better)
Translates to: GALQGGGANGPC*GGAPSALYRMH
Trigger: GTGCATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGGGCCCGTTCGCGCCGCCGCCCTGCAAGGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp GTCGCCTACAGCGACCGGGGTGGACGAGGCACAGGGTaGACTCCGCGGCGGGGCAAAGGCGCTGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VAYSDRGGRGTG*TPRRGKGAGSP
Trigger: GGGGCTGCCAGCGCCTTTGCCCCGCCGCGGAGTTCACCCTGTGCCTCGTCCACCCCGGTCGCTGTAGGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp TCGACCCCGAGGAGGACGCAGACGAGACTGAGGCACTaGCGGGTGCGGCCGTCACCGCCGCTTCCCCGGGTC +
Preference number: 6 (lower is better)
Translates to: STPRRTQTRLRH*RVRPSPPLPRV
Trigger: GACCCGGGGAAGCGGCGGTGACGGCCGCACCCGCCAGTGCCTCAGTCTCGTCTGCGTCCTCCTCGGGGTCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CAA 90 bp TGCTCCACCAGGGCGACCCTGGGCGCTGAGAAGCGGGAATCTTCCTaGGGGACCAGGGCGACGCCTCCTGCTGCCGCCCCCGGCGGGACA +
Preference number: 6 (lower is better)
Translates to: CSTRATLGAEKRESS*GTRATPPAAAPGGT
Trigger: TGTCCCGCCGGGGGCGGCAGCAGGAGGCGTCGCCCTGGTCCCCAAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp AACCTCCACCGCAGCGGCCTGCGGAGACGGCTTCACTaGGGCCCCGGACCAGTGAGGGCTCTCAGAGGCCGG +
Preference number: 6 (lower is better)
Translates to: NLHRSGLRRRLH*GPGPVRALRGR
Trigger: CCGGCCTCTGAGAGCCCTCACTGGTCCGGGGCCCCAGTGAAGCCGTCTCCGCAGGCCGCTGCGGTGGAGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CAA 72 bp GCGAACGGGCCCTGCTGGGGCGGCGCGCCCTCCGCTTaGTACAGGATGCACTCCAGGGTCGACCCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: ANGPCWGGAPSA*YRMHSRVDPEE
Trigger: CTCCTCGGGGTCGACCCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGGGCCCGTTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp CGGAGCTGTCTCCAACCTTGCACCCGGACCGGCTCATaGGCGGGGACAACACCCGCTGGGTGGCGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: RSCLQPCTRTGS*AGTTPAGWRGQ
Trigger: CTGCCCCCGCCACCCAGCGGGTGTTGTCCCCGCTCATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp CGGCGCGTCCTGCTCCACCAGGGCGACCCTGGGCGCTaGGAAGCGGGAATCTTCCTTGGGGACCAGGGCGAC +
Preference number: 6 (lower is better)
Translates to: RRVLLHQGDPGR*EAGIFLGDQGD
Trigger: GTCGCCCTGGTCCCCAAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCAGGACGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp CCTGCTGGGGCGGCGCGCCCTCCGCTTTGTACAGGATaGACTCCAGGGTCGACCCCGAGGAGGACGCAGACG +
Preference number: 6 (lower is better)
Translates to: PAGAARPPLCTG*TPGSTPRRTQT
Trigger: CGTCTGCGTCCTCCTCGGGGTCGACCCTGGAGTGCATCCTGTACAAAGCGGAGGGCGCGCCGCCCCAGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp CAAGGTGTCCGAGGTCTGGCTCCCCGGGAACGGACCTaGGGCTGGGCGACACAGCAGTGGGGATCCGACCTC +
Preference number: 6 (lower is better)
Translates to: QGVRGLAPRERT*GWATQQWGSDL
Trigger: GAGGTCGGATCCCCACTGCTGTGTCGCCCAGCCGCAGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GCGCCATCGGCGCGTCCTGCTCCACCAGGGCGACCCTaGGCGCTGAGAAGCGGGAATCTTCCTTGGGGACCA +
Preference number: 6 (lower is better)
Translates to: APSARPAPPGRP*ALRSGNLPWGP
Trigger: TGGTCCCCAAGGAAGATTCCCGCTTCTCAGCGCCCAGGGTCGCCCTGGTGGAGCAGGACGCGCCGATGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp TGCCGGGCTGGTGACAGGCCCCGGGGCAGCACTTTATaGGCAGCTGCCGTCCCGGAGCTGTCTCCAACCTTG +
Preference number: 6 (lower is better)
Translates to: CRAGDRPRGSTL*AAAVPELSPTL
Trigger: CAAGGTTGGAGACAGCTCCGGGACGGCAGCTGCCCATAAAGTGCTGCCCCGGGGCCTGTCACCAGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GCTGGAAGTCGCTATAGAGAGGGTACGCGTCGTCCTTaGGCTCGGCGTCGGGCGGGTACGCGCAGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: AGSRYREGTRRP*ARRRAGTRSRG
Trigger: TCCCCGACTGCGCGTACCCGCCCGACGCCGAGCCCAAGGACGACGCGTACCCTCTCTATAGCGACTTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CAA 90 bp GGCAGCACTTTATGGGCAGCTGCCGTCCCGGAGCTGTCTCCAACCTaGCACCCGGACCGGCTCATGAGCGGGGACAACACCCGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: GSTLWAAAVPELSPT*HPDRLMSGDNTRWV
Trigger: CACCCAGCGGGTGTTGTCCCCGCTCATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTCCGGGACGGCAGCTGCCCATAAAGTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GGTATGGCCGAAACTTCAGGCAAGGTGTCCGAGGTCTaGCTCCCCGGGAACGGACCTGCGGCTGGGCGACAC +
Preference number: 6 (lower is better)
Translates to: GMAETSGKVSEV*LPGNGPAAGRH
Trigger: GTGTCGCCCAGCCGCAGGTCCGTTCCCGGGGAGCCAGACCTCGGACACCTTGCCTGAAGTTTCGGCCATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp TATGCGCCCTCCACGTCCGACAGCGACTGCTGGTCCTaGGTCTTTTCGTCGGAGGGGTCCTGTCCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: YAPSTSDSDCWS*VFSSEGSCPWQ
Trigger: CTGCCAGGGACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GGGCAGAGGGAGGAGAAAGTGGGTGTTGAATGTGGCTaGACCGGAGGGATCTCCACCTCCTGGGTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: GQREEKVGVECG*TGGISTSWVGG
Trigger: GCCCCCGACCCAGGAGGTGGAGATCCCTCCGGTCCAGCCACATTCAACACCCACTTTCTCCTCCCTCTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS CAA 72 bp TTATGGGCAGCTGCCGTCCCGGAGCTGTCTCCAACCTaGCACCCGGACCGGCTCATGAGCGGGGACAACACC +
Preference number: 6 (lower is better)
Translates to: LWAAAVPELSPT*HPDRLMSGDNT
Trigger: GGTGTTGTCCCCGCTCATGAGCCGGTCCGGGTGCAAGGTTGGAGACAGCTCCGGGACGGCAGCTGCCCATAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp CTGGAATATGCGCCCTCCACGTCCGACAGCGACTGCTaGTCCTGCGTCTTTTCGTCGGAGGGGTCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: LEYAPSTSDSDC*SCVFSSEGSCP
Trigger: GGGACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATATTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp CTGCCCTTGGCCTCCATCCTGTCGTCAGGGGAACTGTaGCTGTCGTTTGTCCCAGCGAGCGGCAAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: LPLASILSSGEL*LSFVPASGKWG
Trigger: TCCCCACTTGCCGCTCGCTGGGACAAACGACAGCCACAGTTCCCCTGACGACAGGATGGAGGCCAAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp GCTCTGGAATATGCGCCCTCCACGTCCGACAGCGACTaGTGGTCCTGCGTCTTTTCGTCGGAGGGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: ALEYAPSTSDSD*WSCVFSSEGSC
Trigger: ACAGGACCCCTCCGACGAAAAGACGCAGGACCAGCAGTCGCTGTCGGACGTGGAGGGCGCATATTCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp CTCGGTACAGCCCATTCCCAGGAAGGGTCGGACTTCTaGTGGCTCCGTACTGCGGGCGACAGTCATCTCCGA +
Preference number: 6 (lower is better)
Translates to: LGTAHSQEGSDF*WLRTAGDSHLR
Trigger: TCGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTCCTGGGAATGGGCTGTACCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GGCTGGCTTCTGAATCCGGCAAGTCCGGCACTTGAGTaGCTGCGGCTGCGACGGCAATTTAGTGACACGCGG +
Preference number: 6 (lower is better)
Translates to: GWLLNPASPALE*LRLRRQFSDTR
Trigger: CCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGCCGGATTCAGAAGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534013.5
CDS GCA 72 bp GACGCAGAGTACTCACAAGTCCGGCACTTGAGTGGCTaGGGCTGCGACGGCAATTTAGTGACACGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: DAEYSQVRHLSG*GCDGNLVTRGS
Trigger: GGAGCCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GGTACAGCCCATTCCCAGGAAGGGTCGGACTTCTGCTaGCTCCGTACTGCGGGCGACAGTCATCTCCGAAGA +
Preference number: 6 (lower is better)
Translates to: GTAHSQEGSDFC*LRTAGDSHLRR
Trigger: TCTTCGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTCCTGGGAATGGGCTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS CAA 72 bp CCTCCATCCTGTCGTCAGGGGAACTGTGGCTGTCGTTaGTCCCAGCGAGCGGCAAGTGGGGAGCGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: PPSCRQGNCGCR*SQRAASGERKK
Trigger: TTTCTTGCGCTCCCCACTTGCCGCTCGCTGGGACAAACGACAGCCACAGTTCCCCTGACGACAGGATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS CAA 90 bp TTCTGTCCGAGGACTGGAGACGCAGAGTACTCACAAGTCCGGCACTaGAGTGGCTGCGGCTGCGACGGCAATTTAGTGACACGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: FCPRTGDAEYSQVRH*SGCGCDGNLVTRGS
Trigger: GGAGCCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCCAGTCCTCGGACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp TTCCCAGGAAGGGTCGGACTTCTGCTGGCTCCGTACTaGGGGCGACAGTCATCTCCGAAGATCTCAGATCCC +
Preference number: 6 (lower is better)
Translates to: FPGRVGLLLAPY*GRQSSPKISDP
Trigger: GGGATCTGAGATCTTCGGAGATGACTGTCGCCCGCAGTACGGAGCCAGCAGAAGTCCGACCCTTCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp TGGAGACGCAGAGTACTCACAAGTCCGGCACTTGAGTaGCTGCGGCTGCGACGGCAATTTAGTGACACGCGG +
Preference number: 6 (lower is better)
Translates to: WRRRVLTSPALE*LRLRRQFSDTR
Trigger: CCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp TCCAGCAGCTGCCGAGTGCGGGCTGCCAATAAGGCGTaGTTGAGAGGCAGGATAGGCACGTGGATGAAATCC +
Preference number: 6 (lower is better)
Translates to: SSSCRVRAANKA*LRGRIGTWMKS
Trigger: GGATTTCATCCACGTGCCTATCCTGCCTCTCAATCACGCCTTATTGGCAGCCCGCACTCGGCAGCTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp GAGTACTCACAAGTCCGGCACTTGAGTGGCTGCGGCTaGGACGGCAATTTAGTGACACGCGGCTCCTTTATC +
Preference number: 6 (lower is better)
Translates to: EYSQVRHLSGCG*DGNLVTRGSFI
Trigger: GATAAAGGAGCCGCGTGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS CAA 72 bp AGGACTGGAGACGCAGAGTACTCACAAGTCCGGCACTaGAGTGGCTGCGGCTGCGACGGCAATTTAGTGACA +
Preference number: 6 (lower is better)
Translates to: RTGDAEYSQVRH*SGCGCDGNLVT
Trigger: TGTCACTAAATTGCCGTCGCAGCCGCAGCCACTCAAGTGCCGGACTTGTGAGTACTCTGCGTCTCCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp CCGACTTTTTCTCTGGCATCAAACTCGTGCATGCTGTaGAGCTCTCAGTCCCTCGCTGAGTTCCACTGCCCC +
Preference number: 6 (lower is better)
Translates to: PTFSLASNSCML*SSQSLAEFHCP
Trigger: GGGGCAGTGGAACTCAGCGAGGGACTGAGAGCTTCACAGCATGCACGAGTTTGATGCCAGAGAAAAAGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GAGGTAATGACTCGAAGCTGTATTGTGGGCTCTGGCTaGCTTCTGAATCCGGCAAGTCCGGCACTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: EVMTRSCIVGSG*LLNPASPALEW
Trigger: CCACTCAAGTGCCGGACTTGCCGGATTCAGAAGCCAGCCAGAGCCCACAATACAGCTTCGAGTCATTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534013.5
CDS GCA 72 bp ATCTCCCGACTTTTTCTCTGGCATCAAACTCGTGCATaGTGTGAAGCTCTCAGTCCCTCGCTGAGTTCCACT +
Preference number: 6 (lower is better)
Translates to: ISRLFLWHQTRA*CEALSPSLSST
Trigger: AGTGGAACTCAGCGAGGGACTGAGAGCTTCACAGCATGCACGAGTTTGATGCCAGAGAAAAAGTCGGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325455.10
ENST00000534013.5
ENST00000617858.4
ENST00000619228.2
CDS CCA 72 bp GAACTGTGGCTGTCGTTTGTCCCAGCGAGCGGCAAGTaGGGAGCGCAAGAAAAAGTAGTAATTGTTAGGAGA +
Preference number: 6 (lower is better)
Translates to: ELWLSFVPASGK*GAQEKVVIVRR
Trigger: TCTCCTAACAATTACTACTTTTTCTTGCGCTCCCCACTTGCCGCTCGCTGGGACAAACGACAGCCACAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS GCA 72 bp TGTGATATCAGGCTGGATTCAGCCCCACCTGCTTTGTaGCAGGCAAGGGCTACTTATCAGTATGAAGTAGCT +
Preference number: 6 (lower is better)
Translates to: CDIRLDSAPPAL*QARATYQYEVA
Trigger: AGCTACTTCATACTGATAAGTAGCCCTTGCCTGGCACAAAGCAGGTGGGGCTGAATCCAGCCTGATATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS CCA 72 bp AGAATTAGAGAAAGTTGTGGTGATGTGATATCAGGCTaGATTCAGCCCCACCTGCTTTGTGCCAGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: RIRESCGDVISG*IQPHLLCARQG
Trigger: CCCTTGCCTGGCACAAAGCAGGTGGGGCTGAATCCAGCCTGATATCACATCACCACAACTTTCTCTAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS TCA 72 bp GTATTAGATCAGGTGCAAAATACAGCATCTGCCCACTaGCGTGTTTGTAGGATCTCCATCCTAGACCAAACA +
Preference number: 6 (lower is better)
Translates to: VLDQVQNTASAH*RVCRISILDQT
Trigger: TGTTTGGTCTAGGATGGAGATCCTACAAACACGTCAGTGGGCAGATGCTGTATTTTGCACCTGATCTAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000526300.5
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp AACAGGTTGATCAGTGGTGGAATCAACTGTATGTCTTaGCCTGGTGAAAAAGTGAATCTCTGGCTTAGGGCT +
Preference number: 6 (lower is better)
Translates to: NRLISGGINCMS*PGEKVNLWLRA
Trigger: AGCCCTAAGCCAGAGATTCACTTTTTCACCAGGTCAAGACATACAGTTGATTCCACCACTGATCAACCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
ENST00000632634.1
CDS TCA 72 bp CACTTGACTACTGAAAGAAGTTGCCTCTCGCCTAGTTaGTTAAGACTTGTCAGCAAAGAACTGGAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: HLTTERSCLSPS*LRLVSKELEVS
Trigger: TGACACCTCCAGTTCTTTGCTGACAAGTCTTAATCAACTAGGCGAGAGGCAACTTCTTTCAGTAGTCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
CDS CCA 72 bp ATTAGTTACATCAACAATCACTGGGTGGGTGAGGTGTaGGTAATTATACCAGTATTCTGCAGGGGTCATGGA +
Preference number: 6 (lower is better)
Translates to: ISYINNHWVGEV*VIIPVFCRGHG
Trigger: TCCATGACCCCTGCAGAATACTGGTATAATTACCCACACCTCACCCACCCAGTGATTGTTGATGTAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS CAA 90 bp TGCAATCTGCTGGCTCTAGTATCTGATCATGCCCATAGATACATTTaGTTTGGCTCAGACAATGCTGACCAGAATTATGAGACCATCCGT +
Preference number: 6 (lower is better)
Translates to: CNLLALVSDHAHRYI*FGSDNADQNYETIR
Trigger: ACGGATGGTCTCATAATTCTGGTCAGCATTGTCTGAGCCAAACAAAATGTATCTATGGGCATGATCAGATACTAGAGCCAGCAGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS TCA 72 bp AATACTTTCATACAGAGGAACTCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGTGGGATCTGCCACATG +
Preference number: 6 (lower is better)
Translates to: NTFIQRNSSWLT*SLTNSCGICHM
Trigger: CATGTGGCAGATCCCACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGAGTTCCTCTGTATGAAAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263463.9
ENST00000325455.10
ENST00000530764.1
ENST00000533207.5
ENST00000534013.5
CDS TCA 72 bp GATTTCACTCAAATGACAAGTGAAGCTAGTTCTCATTaGGAATGCCACCCACACGCACAAATACAACAAGGC +
Preference number: 6 (lower is better)
Translates to: DFTQMTSEASSH*ECHPHAQIQQG
Trigger: GCCTTGTTGTATTTGTGCGTGTGGGTGGCATTCTCAATGAGAACTAGCTTCACTTGTCATTTGAGTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325455.10
ENST00000617858.4
ENST00000619228.2
CDS TCA 72 bp GTGGAATCAACTGTATGTCTTGACCTGGTGAAAAAGTaGATCTCTGGCTTAGGGCTTGGCTTTCATTTGGAA +
Preference number: 6 (lower is better)
Translates to: VESTVCLDLVKK*ISGLGLGFHLE
Trigger: TTCCAAATGAAAGCCAAGCCCTAAGCCAGAGATTCACTTTTTCACCAGGTCAAGACATACAGTTGATTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325455.10
ENST00000528960.5
ENST00000533207.5
ENST00000534013.5
ENST00000534780.5
ENST00000619228.2
ENST00000632634.1
CDS CAA 72 bp CTGGCTCTAGTATCTGATCATGCCCATAGATACATTTaGTTTGGCTCAGACAATGCTGACCAGAATTATGAG +
Preference number: 6 (lower is better)
Translates to: LALVSDHAHRYI*FGSDNADQNYE
Trigger: CTCATAATTCTGGTCAGCATTGTCTGAGCCAAACAAAATGTATCTATGGGCATGATCAGATACTAGAGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533207.5
CDS TCA 72 bp AATACTTTCATACAGAGGAACTCTTCTTGGCTAACTTaGAGCTTGACAAACTCCTGTGGGATTCATTTAGTA +
Preference number: 6 (lower is better)
Translates to: NTFIQRNSSWLT*SLTNSCGIHLV
Trigger: TACTAAATGAATCCCACAGGAGTTTGTCAAGCTTCAAGTTAGCCAAGAAGAGTTCCTCTGTATGAAAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528960.5
ENST00000534780.5
CDS CCA 72 bp TTTATACCCGTGCTGGTCAGATCACATTTGTATTTCTaGATGATTTCTGGAGTTTCTACTTTGATGAATTCT +
Preference number: 6 (lower is better)
Translates to: FIPVLVRSHLYF*MISGVSTLMNS
Trigger: AGAATTCATCAAAGTAGAAACTCCAGAAATCATCCAGAAATACAAATGTGATCTGACCAGCACGGGTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533207.5