Pregenerated sensors for PGPEP1L (Homo sapiens)
Ensembl gene IDs: ENSG00000183571Ensembl transcript IDs: ENST00000378919.6, ENST00000535714.2, ENST00000637120.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCTTCTCAATGCACAGTTaGGTGCTACATACAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: VMKTITEASSSPVKCPPFFSMHS*VLHTGL Trigger: CAATCCTGTATGTAGCACTCAACTGTGCATTGAGAA...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTTTCTCAATGCACAGTTaGGTGCTACATACAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: FCWANSEFSTLFVLQAIFFSMHS*VLHTGL Trigger: CAATCCTGTATGTAGCACTCAACTGTGCATTGAGAA...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| 3UTR TCA 72 bp | GTTTCTCAATGCACAGTTGAGTGCTACATACAGGATTaGAACATTCAATTTTCTCTAGAGGAGCAATCCCCC | + |
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Preference number: 3 (lower is better) Translates to: VSQCTVECYIQD*NIQFSLEEQSP Trigger: GGGGGATTGCTCCTCTAGAGAAAATTGAATGTTTCAATCCTGTATGTAGCACTCAACTGTGCATTGAGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| 3UTR-3UTR CAA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCAGTTTTCCACCCTCTTaGTCTTACAAGCAATTTTTG | + |
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Preference number: 3 (lower is better) Translates to: VMKTITEASSSPVKCPPFSFPPS*SYKQFL Trigger: CAAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACT...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCGGCACCTTCTCTGCCTaGCCGCGTGCTCGCCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VMKTITEASSSPVKCPPFGTFSA*PRARRG Trigger: TCCCCGGCGAGCACGCGGCCAGGCAGAGAAGGTGCC...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGGAGCCCAACCCCTCCTaGCCGCCCGGCGTCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKEPNPS*PPGVRS Trigger: GCTACGGACGCCGGGCGGCCAGGAGGGGTTGGGCTC...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACCCAGCACGTCTGGGCTaGCAGGTAGGCACACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYPARLG*QVGTRR Trigger: GCGGCGTGTGCCTACCTGGCAGCCCAGACGTGCTGG...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTGGGCTCTGCGCGCTCTaGGCTCCGGGCACCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSGLCAL*APGTFS Trigger: AGAGAAGGTGCCCGGAGCTCAGAGCGCGCAGAGCCC...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCCTCGGGCCAGAAGCTaGGGATGTCGGCGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKPRARS*GCRRPG Trigger: ACCGGGACGCCGACATCCGCAGCTTCTGGCCCGAGG...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTCTCTTCCCAGCAGGCTaGCCGGGAGCCCGCGCGATA | + |
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Preference number: 4 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSLFPAG*PGARAI Trigger: TATCGCGCGGGCTCCCGGCCAGCCTGCTGGGAAGAG...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACGTGGAGGGACATGGATaGGTGCCGCGCAGCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYVEGHG*VPRSPF Trigger: GAAAGGGCTGCGCGGCACTCATCCATGTCCCTCCAC...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTTCCGGGCACCTTCTCTaGCTGGCCGCGTGCTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFSGHLL*LAACSP Trigger: CGGCGAGCACGCGGCCAGGCAGAGAAGGTGCCCGGA...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACTCCCCAGGCCCAGCTTaGAGAGCTCCACGAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYSPGPA*RAPRES Trigger: GGACTCTCGTGGAGCTCTCCAAGCTGGGCCTGGGGA...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS-3UTR TCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTGGGCTCTGCGCGCTCTaGGCTCCGGGCACCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFGLCAL*APGTFS Trigger: AGAGAAGGTGCCCGGAGCTCAGAGCGCGCAGAGCCC...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | ATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCAGATGGCGGCGGTGTCCATaGCCACATGCACGACGAGTT | + |
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Preference number: 4 (lower is better) Translates to: MKTITEASSSPVKCPPFRWRRCP*PHARRV Trigger: AACTCGTCGTGCATGTGGGCATGGACACCGCCGCCA...TCTGAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTCCAGCACGTCTGGGCTaGCAGGTAGGCACACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFPARLG*QVGTRR Trigger: GCGGCGTGTGCCTACCTGGCAGCCCAGACGTGCTGG...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTCCCCAGGCCCAGCTTaGAGAGCTCCAGTCACCACC | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKSPGPA*RAPVTT Trigger: GGTGGTGACTGGAGCTCTCCAAGCTGGGCCTGGGGA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTGGCGGCGGTGTCCATaGCCACATGCACGACGAGTT | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKWRRCP*PHARRV Trigger: AACTCGTCGTGCATGTGGGCATGGACACCGCCGCCA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCTGCAGACTGCCTTCATaGAGACCCCTGACTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VMKTITEASSSPVKCPPFCRLPS*RPLTPA Trigger: TGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCA...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAGGGACATGGATGAGTaGCGCGCAGCCCTTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYRDMDE*RAALSM Trigger: CATGGAAAGGGCTGCGCGGCACTCATCCATGTCCCT...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCTCGAACTGGGCTCTGTaGTTGGGCTTTCCCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMKTITEASSSPVKCPPFSNWAL*LGFPTS Trigger: AGAGGTGGGAAAGCCCAAGCACAGAGCCCAGTTCGA...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACATTCGTTTCTCCCGGTaGGTCCGTGATGTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYIRFSR*VRDVAG Trigger: GCCAGCCACATCACGGACCCACCGGGAGAAACGAAT...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAGACTGTTCCAGAATaGTCGCCTTGGCGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKQTVPE*SPWRRC Trigger: ACACCGCCGCCAAGGCGATCATTCTGGAACAGTCTG...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACCCACAGCTACGCGCTTaGAGACTGCCTTCATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYPQLRA*RLPSCR Trigger: TCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGG...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACTCGAACTGGGCTCTGTaGTTGGGCTTTCCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYSNWAL*LGFPTS Trigger: AGAGGTGGGAAAGCCCAAGCACAGAGCCCAGTTCGA...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCGATTCTTGGTCTCACTaGCTTCAAGAACGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VMKTITEASSSPVKCPPFDSWSH*LQERSR Trigger: GCGGCTTCGTTCTTGAAGTCAGTGAGACCAAGAATC...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTCCAGAGTCCGCAGCTaGACCACTGTTTCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKSRVRS*TTVSFP Trigger: GGGGAATGAAACAGTGGTGCAGCTGCGGACTCTGGA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTGCAGACTGCCTTCATaGAGACCCCTGACTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKCRLPS*RPLTPA Trigger: TGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCCACAGCTACGCGCTTaGAGACTGCCTTCATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKPQLRA*RLPSCR Trigger: TCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGG...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTGATAGTGGAGGGACATaGATGAGTGCCGCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFDSGGT*MSAAQP Trigger: GGGCTGCGCGGCACTCATCCATGTCCCTCCACTATC...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGGATAGTGGAGGGACATaGATGAGTGCCGCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: YKQFLKKFLNAQLSATYRDSGGT*MSAAQP Trigger: GGGCTGCGCGGCACTCATCCATGTCCCTCCACTATC...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTCAGACTGTTCCAGAATaGTCGCCTTGGCGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFQTVPE*SPWRRC Trigger: ACACCGCCGCCAAGGCGATCATTCTGGAACAGTCTG...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGAGGGACATGGATGAGTaGCGCGCAGCCCTTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: YKQFLKKFLNAQLSATYRRDMDE*RAALSM Trigger: CATGGAAAGGGCTGCGCGGCACTCATCCATGTCCCT...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTGGAAGGACCATGGTTaGGTTTTCTTCGAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSWKDHG*VFFELG Trigger: GCCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCA...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR GCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTTCCAGAGTCCGCAGCTaGACCACTGTTTCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFSRVRS*TTVSFP Trigger: GGGGAATGAAACAGTGGTGCAGCTGCGGACTCTGGA...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCAGAGAGTTTTCTTCGAACTaGGCTCTGTGCTTGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: MKTITEASSSPVKCPPFREFSSN*ALCLGF Trigger: AAAGCCCAAGCACAGAGCCCAGTTCGAAGAAAACTC...TCTGAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGCCGGTCAGTTCCCTTTaGCTGGAAGGACCATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: YKQFLKKFLNAQLSATYRPVSSL*LEGPWL Trigger: CAACCATGGTCCTTCCAGCCAAAGGGAACTGACCGG...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCTTAAGGTGGCGTGTTTaGAGTTATTCGTTTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VMKTITEASSSPVKCPPFLRWRV*SYSFLP Trigger: CGGGAGAAACGAATAACTCCAAACACGCCACCTTAA...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACTGGCTGGAAGGACCATaGTTGAGTTTTCTTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYWLEGP*LSFLRT Trigger: AGTTCGAAGAAAACTCAACCATGGTCCTTCCAGCCA...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTTGGAAGGACCATGGTTaGGTTTTCTTCGAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFWKDHG*VFFELG Trigger: GCCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCA...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTACAACCCACCAATTCTaGACACACTACCACGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFTTHQF*THYHVA Trigger: AGCCACGTGGTAGTGTGTCCAGAATTGGTGGGTTGT...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS-3UTR CCA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTCTTCCAGCATTTCCTaGATGATGACTCTCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSSSSIS*MMTLKA Trigger: AGCCTTGAGAGTCATCATCCAGGAAATGCTGGAAGA...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTCTTCCAGCATTTCCTaGATGATGACTCTCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKSSSIS*MMTLKA Trigger: AGCCTTGAGAGTCATCATCCAGGAAATGCTGGAAGA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CCA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTGGCTGGAAGGACCATaGTTGAGTTTTCTTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSWLEGP*LSFLRT Trigger: AGTTCGAAGAAAACTCAACCATGGTCCTTCCAGCCA...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR TCA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTTCTCAATGCACAGTTaGGTGCTACATACAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKFSMHS*VLHTGL Trigger: CAATCCTGTATGTAGCACTCAACTGTGCATTGAGAA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTCTAGTTCATCCCCTGTaGAATGTCCACCTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFLVHPL*NVHLSE Trigger: CTCTGAAAGGTGGACATTTCACAGGGGATGAACTAG...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000535714.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTACAGACGTATCTGCCTaGATCTCGGGAAAAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFTDVSA*ISGKDH Trigger: GTGATCTTTTCCCGAGATGCAGGCAGATACGTCTGT...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR CCA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGGAGTTTTCTTCGAACTaGGCTCTGTGCTTGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKQFLKKFLNAQLSATYREFSSN*ALCLGF Trigger: AAAGCCCAAGCACAGAGCCCAGTTCGAAGAAAACTC...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR CCA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGGGAGTTTCTTCCTTCTaGCAGATTCGTGATCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKQFLKKFLNAQLSATYRGVSSF*QIRDLA Trigger: AGCGAGATCACGAATCTGCCAGAAGGAAGAAACTCC...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000535714.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTAATCACAGACGTATCTaGCTGCATCTCGGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCWANSEFSTLFVLQAIFNHRRI*LHLGKR Trigger: TCTTTTCCCGAGATGCAGGCAGATACGTCTGTGATT...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR GCA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGAATCACAGACGTATCTaGCTGCATCTCGGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKQFLKKFLNAQLSATYRNHRRI*LHLGKR Trigger: TCTTTTCCCGAGATGCAGGCAGATACGTCTGTGATT...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCAGAAGCAGCAACGGTTATTaGAAACAAGCAAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: MKTITEASSSPVKCPPFRSSNGY*KQAKQQ Trigger: TTGTTGTTTTGCTTGTTTGCAATAACCGTTGCTGCT...TCTGAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
||
| CDS GCA 90 bp | CGTCTGGGCTGCCAGGTAGGCACACGCCGCCCTCGGGCCAGAAGCTaGGGATGTCGGCGTCCCGGTAGCCTTGGTTCTTGCCAGACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLGCQVGTRRPRARS*GCRRPGSLGSCQTV Trigger: AACAGTCTGGCAAGAACCAAGGCTACCGGGACGCCGACATCCGCAGCTTCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCAGCCCAGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS GCA 90 bp | TGCAGACTGCCTTCATGCAGACCCCTGACTCCAGCACGTCTGGGCTaGCAGGTAGGCACACGCCGCCCTCGGGCCAGAAGCTGCGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: CRLPSCRPLTPARLG*QVGTRRPRARSCGC Trigger: ACATCCGCAGCTTCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCAGCCCAGACGTGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS TCA 90 bp | CCAGCAGGCTGGCCGGGAGCCCGCGCGATAGTGGAGGGACATGGATaGGTGCCGCGCAGCCCTTTCCATGATGCAGAGACAGGTAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGWPGARAIVEGHG*VPRSPFHDAETGNR Trigger: CCTATTACCTGTCTCTGCATCATGGAAAGGGCTGCGCGGCACTCATCCATGTCCCTCCACTATCGCGCGGGCTCCCGGCCAGCCTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS GCA 90 bp | TCACGTCGACACCCTCCACAGCTACGCGCTTGCAGACTGCCTTCATaGAGACCCCTGACTCCAGCACGTCTGGGCTGCCAGGTAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SRRHPPQLRACRLPS*RPLTPARLGCQVGT Trigger: TGTGCCTACCTGGCAGCCCAGACGTGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTGTCGACGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS TCA 90 bp | TGTCGGCGTCCCGGTAGCCTTGGTTCTTGCCAGACTGTTCCAGAATaGTCGCCTTGGCGGCGGTGTCCATGCCCACATGCACGACGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CRRPGSLGSCQTVPE*SPWRRCPCPHARRV Trigger: AACTCGTCGTGCATGTGGGCATGGACACCGCCGCCAAGGCGATCATTCTGGAACAGTCTGGCAAGAACCAAGGCTACCGGGACGCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
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| CDS GCA 90 bp | CATCTCGGGAAAAGATCACGTCGACACCCTCCACAGCTACGCGCTTaGAGACTGCCTTCATGCAGACCCCTGACTCCAGCACGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLGKRSRRHPPQLRA*RLPSCRPLTPARLG Trigger: GCCCAGACGTGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTGTCGACGTGATCTTTTCCCGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
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| CDS CCA 90 bp | GTGGCGTGTTTGGAGTTATTCGTTTCTCCCGGTGGGTCCGTGATGTaGCTGGCTTTAAGAACGAAGCTGCAGACCTTCACGGTGAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VACLELFVSPGGSVM*LALRTKLQTFTVSV Trigger: AACGCTCACCGTGAAGGTCTGCAGCTTCGTTCTTAAAGCCAGCCACATCACGGACCCACCGGGAGAAACGAATAACTCCAAACACGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | GTCATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCTTCCCCAGGCCCAGCTaGGAGAGCTCCAGTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VMKTITEASSSPVKCPPFFPRPS*ESSSHH Trigger: GTGGTGACTGGAGCTCTCCAAGCTGGGCCTGGGGAA...GAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000535714.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGTCCAGAATGATCGCCTaGGCGGCGGTGTCCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKSRMIA*AAVSMP Trigger: GGGCATGGACACCGCCGCCAAGGCGATCATTCTGGA...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | ATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCAGATCCACAGCTACGCGCTaGCAGACTGCCTTCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MKTITEASSSPVKCPPFRSTATR*QTAFMQ Trigger: CTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGA...TCTGAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTTTCCCCAGGCCCAGCTaGGAGAGCTCCACGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FCWANSEFSTLFVLQAIFFPRPS*ESSTRV Trigger: GACTCTCGTGGAGCTCTCCAAGCTGGGCCTGGGGAA...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS-3UTR CAA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACCACATGCACGACGAGTaGCGGCTGATGATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYHMHDE*RLMIFP Trigger: TGGGAAGATCATCAGCCGCAACTCGTCGTGCATGTG...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR CAA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTAACTGGGCTCTGTGCTaGGGCTTTCCCACCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSNWALC*GFPTSS Trigger: GGAAGAGGTGGGAAAGCCCAAGCACAGAGCCCAGTT...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGAACTGGGCTCTGTGCTaGGGCTTTCCCACCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKNWALC*GFPTSS Trigger: GGAAGAGGTGGGAAAGCCCAAGCACAGAGCCCAGTT...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTCCCGGTCAGTTCCCTTaGGCTGGAAGGACCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSPGQFP*AGRTMV Trigger: AACCATGGTCCTTCCAGCCAAAGGGAACTGACCGGG...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCACATGCACGACGAGTaGCGGCTGATGATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKHMHDE*RLMIFP Trigger: TGGGAAGATCATCAGCCGCAACTCGTCGTGCATGTG...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGGGCGTCCCGGTAGCCTaGGTTCTTGCCAGACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YKQFLKKFLNAQLSATYRGVPVA*VLARLF Trigger: GAACAGTCTGGCAAGAACCAAGGCTACCGGGACGCC...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | TTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCAATTTTTGGCGTCCCGGTAGCCTaGGTTCTTGCCAGACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCWANSEFSTLFVLQAIFGVPVA*VLARLF Trigger: GAACAGTCTGGCAAGAACCAAGGCTACCGGGACGCC...AAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAAGCCACGTGGCTCAACCTaGAAAACATGCAGTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCDFVGLIQSFPPSLSYKPRGST*KTCSHH Trigger: GTGGTGACTGCATGTTTTCAAGGTTGAGCCACGTGG...CTTGTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS-3UTR CAA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGTCCACAGCTACGCGCTaGCAGACTGCCTTCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YKQFLKKFLNAQLSATYRSTATR*QTAFMQ Trigger: CTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGA...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACCTGGAAGGACCATGGTaGAGTTTTCTTCGAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYLEGPW*SFLRTG Trigger: CCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCAG...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | TACAAGCAATTTTTGAAAAAGTTTCTCAATGCACAGTTGAGTGCTACATACAGGCCCGGTCAGTTCCCTTaGGCTGGAAGGACCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YKQFLKKFLNAQLSATYRPGQFP*AGRTMV Trigger: AACCATGGTCCTTCCAGCCAAAGGGAACTGACCGGG...CCTGTATGTAGCACTCAACTGTGCATTGAGAAACTTTTTCAAAAATTGCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | ATAACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTCTGGAAGGACCATGGTaGAGTTTTCTTCGAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITLCDFVGLIQSFPPSLSLEGPW*SFLRTG Trigger: CCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCAG...AGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS-3UTR CAA 90 bp | ACCCTTTGTGATTTTGTTGGGCTAATTCAGAGTTTTCCACCCTCTTTGTCTTACAGTTTTCCACCCTCTTaGTCTTACAAGCAATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLCDFVGLIQSFPPSLSYSFPPS*SYKQFL Trigger: CAAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACT...GTAAGACAAAGAGGGTGGAAAACTCTGAATTAGCCCAACAAAATCACAAAGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAAACCATAACTGAAGCTAGTTCATCCCCTGTGAAATGTCCACCTTTCAGAAGTTTTCCACCCTCTTaGTCTTACAAGCAATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MKTITEASSSPVKCPPFRSFPPS*SYKQFL Trigger: CAAAAATTGCTTGTAAGACAAAGAGGGTGGAAAACT...TCTGAAAGGTGGACATTTCACAGGGGATGAACTAGCTTCAGTTATGGTTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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| CDS GCA 72 bp | GCTCTGAGCTCCGGGCACCTTCTCTGCCTGGCCGCGTaGTCGCCGGGGACCGGGGTGGAGCGGGAGCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ALSSGHLLCLAA*SPGTGVEREPN Trigger: GTTGGGCTCCCGCTCCACCCCGGTCCCCGGCGAGCACGCGGCCAGGCAGAGAAGGTGCCCGGAGCTCAGAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535714.2 |
||
| CDS GCA 72 bp | TGCCAGGTAGGCACACGCCGCCCTCGGGCCAGAAGCTaGGGATGTCGGCGTCCCGGTAGCCTTGGTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CQVGTRRPRARS*GCRRPGSLGSC Trigger: GCAAGAACCAAGGCTACCGGGACGCCGACATCCGCAGCTTCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS GCA 72 bp | CCTTCATGCAGACCCCTGACTCCAGCACGTCTGGGCTaGCAGGTAGGCACACGCCGCCCTCGGGCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSCRPLTPARLG*QVGTRRPRARS Trigger: GCTTCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCAGCCCAGACGTGCTGGAGTCAGGGGTCTGCATGAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
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| CDS CAA 90 bp | GCCGCCCTCGGGCCAGAAGCTGCGGATGTCGGCGTCCCGGTAGCCTaGGTTCTTGCCAGACTGTTCCAGAATGATCGCCTTGGCGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AALGPEAADVGVPVA*VLARLFQNDRLGGG Trigger: ACCGCCGCCAAGGCGATCATTCTGGAACAGTCTGGCAAGAACCAAGGCTACCGGGACGCCGACATCCGCAGCTTCTGGCCCGAGGGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS TCA 72 bp | TGGCCGGGAGCCCGCGCGATAGTGGAGGGACATGGATaGGTGCCGCGCAGCCCTTTCCATGATGCAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: WPGARAIVEGHG*VPRSPFHDAET Trigger: TGTCTCTGCATCATGGAAAGGGCTGCGCGGCACTCATCCATGTCCCTCCACTATCGCGCGGGCTCCCGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS GCA 72 bp | CACCCTCCACAGCTACGCGCTTGCAGACTGCCTTCATaGAGACCCCTGACTCCAGCACGTCTGGGCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPPQLRACRLPS*RPLTPARLGCQ Trigger: CTGGCAGCCCAGACGTGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
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| CDS CAA 90 bp | GCATCTCGGGAAAAGATCACGTCGACACCCTCCACAGCTACGCGCTaGCAGACTGCCTTCATGCAGACCCCTGACTCCAGCACGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASREKITSTPSTATR*QTAFMQTPDSSTSG Trigger: CCCAGACGTGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTGTCGACGTGATCTTTTCCCGAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS TCA 72 bp | CCCGGTAGCCTTGGTTCTTGCCAGACTGTTCCAGAATaGTCGCCTTGGCGGCGGTGTCCATGCCCACATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSLGSCQTVPE*SPWRRCPCPHA Trigger: TGCATGTGGGCATGGACACCGCCGCCAAGGCGATCATTCTGGAACAGTCTGGCAAGAACCAAGGCTACCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS CAA 72 bp | CGCAGCTGCACCACTGTTTCATTCCCCAGGCCCAGCTaGGAGAGCTCCACGAGAGTCCGCGGCTTCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSCTTVSFPRPS*ESSTRVRGFIL Trigger: AAGAATGAAGCCGCGGACTCTCGTGGAGCTCTCCAAGCTGGGCCTGGGGAATGAAACAGTGGTGCAGCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378919.6 |
||
| CDS CAA 72 bp | GGGCCAGAAGCTGCGGATGTCGGCGTCCCGGTAGCCTaGGTTCTTGCCAGACTGTTCCAGAATGATCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GPEAADVGVPVA*VLARLFQNDRL Trigger: AAGGCGATCATTCTGGAACAGTCTGGCAAGAACCAAGGCTACCGGGACGCCGACATCCGCAGCTTCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS CAA 90 bp | TCCAGAGTCCGCAGCTGCACCACTGTTTCATTCCCCAGGCCCAGCTaGGAGAGCTCCACGAGAGTCCGCGGCTTCATTCTTGAAGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRVRSCTTVSFPRPS*ESSTRVRGFILEVS Trigger: ACTGACTTCAAGAATGAAGCCGCGGACTCTCGTGGAGCTCTCCAAGCTGGGCCTGGGGAATGAAACAGTGGTGCAGCTGCGGACTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378919.6 |
||
| CDS CAA 72 bp | GAAAAGATCACGTCGACACCCTCCACAGCTACGCGCTaGCAGACTGCCTTCATGCAGACCCCTGACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EKITSTPSTATR*QTAFMQTPDSS Trigger: GCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTGTCGACGTGATCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378919.6 ENST00000535714.2 ENST00000637120.1 |
||
| CDS CAA 90 bp | CCAGGCCCAGCTTGGAGAGCTCCACGAGAGTCCGCGGCTTCATTCTaGAAGTCAGTGAGACCAACAACCCACCAATTCTGGACACACTAC | + |
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Preference number: 6 (lower is better) Translates to: PGPAWRAPRESAASF*KSVRPTTHQFWTHY Trigger: GTAGTGTGTCCAGAATTGGTGGGTTGTTGGTCTCACTGACTTCAAGAATGAAGCCGCGGACTCTCGTGGAGCTCTCCAAGCTGGGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS TCA 72 bp | CCCCGGTCAGTTCCCTTTGGCTGGAAGGACCATGGTTaGGTTTTCTTCGAACTGGGCTCTGTGCTTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PRSVPFGWKDHG*VFFELGSVLGL Trigger: AAGCCCAAGCACAGAGCCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCAGCCAAAGGGAACTGACCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS CAA 72 bp | CCACCAATTCTGGACACACTACCACGTGGCTCAACCTaGAAAACATGCAGTCACCACCACGCAGCTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PPILDTLPRGST*KTCSHHHAAGL Trigger: CAGCCCAGCTGCGTGGTGGTGACTGCATGTTTTCAAGGTTGAGCCACGTGGTAGTGTGTCCAGAATTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS CCA 72 bp | AATCCCCCGGTCAGTTCCCTTTGGCTGGAAGGACCATaGTTGAGTTTTCTTCGAACTGGGCTCTGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: NPPVSSLWLEGP*LSFLRTGLCAW Trigger: CCAAGCACAGAGCCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCAGCCAAAGGGAACTGACCGGGGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378919.6 ENST00000535714.2 |
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| CDS CCA 72 bp | GACCAACAACCCACCAATTCTGGACACACTACCACGTaGCTCAACCTTGAAAACATGCAGTCACCACCACGC | + |
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Preference number: 6 (lower is better) Translates to: DQQPTNSGHTTT*LNLENMQSPPR Trigger: GCGTGGTGGTGACTGCATGTTTTCAAGGTTGAGCCACGTGGTAGTGTGTCCAGAATTGGTGGGTTGTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378919.6 |
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| CDS CCA 72 bp | TTGGAGTTATTCGTTTCTCCCGGTGGGTCCGTGATGTaGCTGGCTTTAAGAACGAAGCTGCAGACCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: LELFVSPGGSVM*LALRTKLQTFT Trigger: CGTGAAGGTCTGCAGCTTCGTTCTTAAAGCCAGCCACATCACGGACCCACCGGGAGAAACGAATAACTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535714.2 |
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