RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGPEP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130517

Ensembl transcript IDs: ENST00000252813.5, ENST00000269919.11, ENST00000595066.5, ENST00000595552.2, ENST00000596962.5, ENST00000597431.2, ENST00000600283.6, ENST00000604499.6

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGGCAGAGAGTGAACTCGGCTTCCAAAGGCTCAGGGGAGGCTTaGCCGGCCCTCAGCCAGGCTCAGATGCCACAGGCCTTGGCAAGC +
Preference number: 1 (lower is better)
Translates to: GRQRVNSASKGSGEA*PALSQAQMPQALAS
Trigger: GCTTGCCAAGGCCTGTGGCATCTGAGCCTGGCTGAGGGCCGGGCAAGCCTCCCCTGAGCCTTTGGAAGCCGAGTTCACTCTCTGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp CTACATAAAACCCTTTGGCCGCCCGGAATTCCTCCTGCTCAGACATaGCGGGACATGCAGAGCTCTGCCAACTCCAGCCCCCGCGCCCCC +
Preference number: 1 (lower is better)
Translates to: LHKTLWPPGIPPAQT*RDMQSSANSSPRAP
Trigger: GGGGGCGCGGGGGCTGGAGTTGGCAGAGCTCTGCATGTCCCGGCATGTCTGAGCAGGAGGAATTCCGGGCGGCCAAAGGGTTTTATGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp ACCTGGCAAAGACCTGCCTCCTTGACCATGATCAGCACCCCATGCTaGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: TWQRPASLTMISTPC*PSRSSQRPQDRGWG
Trigger: GCCCCAGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 90 bp CACAGGTGGCCCTGGTCTCCATGGCGACAGCTCATAGCTTGGTGTTaGAAGGACCACGACCCCCATGGCCACATCTGGGGCAGCAGTCCC +
Preference number: 1 (lower is better)
Translates to: HRWPWSPWRQLIAWC*KDHDPHGHIWGSSP
Trigger: GGGACTGCTGCCCCAGATGTGGCCATGGGGGTCGTGGTCCTTTCAACACCAAGCTATGAGCTGTCGCCATGGAGACCAGGGCCACCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp GCAACCTGGCAAAGACCTGCCTCCTTGACCATGATCAGCACCCCATaGTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: ATWQRPASLTMISTP*WPSRSSQRPQDRGW
Trigger: CCAGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTGCCAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp ACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAG +
Preference number: 1 (lower is better)
Translates to: TKILPGHLDLPGWPP*SRQLCPQMQGGKWE
Trigger: CTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGGCTGGCCTCCCTGGTCACGGCAGCT +
Preference number: 1 (lower is better)
Translates to: AVVSQLMDSPDQDSP*ASGPPRLASLVTAA
Trigger: AGCTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 90 bp AGGCCCCAGACCCCACCTCTGAATGGCTTGGGCCAGACGCTGGTCTaGATCGTCAGGAGCCACGGCCACTACCCAGTGACCAATTCCTGT +
Preference number: 1 (lower is better)
Translates to: RPQTPPLNGLGQTLV*IVRSHGHYPVTNSC
Trigger: ACAGGAATTGGTCACTGGGTAGTGGCCGTGGCTCCTGACGATCCAGACCAGCGTCTGGCCCAAGCCATTCAGAGGTGGGGTCTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp AGGTCCAACATCTCCTCAATGATGGCTCTCAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAG +
Preference number: 1 (lower is better)
Translates to: RSNISSMMALSALPS*SALYGFPSGGTWTK
Trigger: CTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR GCA 90 bp TTTCCACCTGTCAGTTACAGTCCACACCCACTGCCAGGCGCCCACTaGAAGTCACCCGCCAGCATCCACCTTCCCCTCCAGAGAAAGCCC +
Preference number: 1 (lower is better)
Translates to: FPPVSYSPHPLPGAH*KSPASIHLPLQRKP
Trigger: GGGCTTTCTCTGGAGGGGAAGGTGGATGCTGGCGGGTGACTTGCAGTGGGCGCCTGGCAGTGGGTGTGGACTGTAACTGACAGGTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp CAGCAGGTATGTTCAGCGTCCACCCGGGAATTAGCTTTCCAGACGTaGGCACTGGGCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGG +
Preference number: 1 (lower is better)
Translates to: QQVCSASTRELAFQT*ALGSACPSTAILPR
Trigger: CCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGCCCAGTGCCCACGTCTGGAAAGCTAATTCCCGGGTGGACGCTGAACATACCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp AGTGTCCCTACTCATTTCCACCTGTCAGTTACAGTCCACACCCACTaGCAGGCGCCCACTGCAAGTCACCCGCCAGCATCCACCTTCCCC +
Preference number: 1 (lower is better)
Translates to: SVPTHFHLSVTVHTH*QAPTASHPPASTFP
Trigger: GGGGAAGGTGGATGCTGGCGGGTGACTTGCAGTGGGCGCCTGGCAGTGGGTGTGGACTGTAACTGACAGGTGGAAATGAGTAGGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp CCAAAGGCTCAGGGGAGGCTTGCCCGGCCCTCAGCCAGGCTCAGATaGCACAGGCCTTGGCAAGCAGAAAGCCTAATTCAAATCCCTATG +
Preference number: 1 (lower is better)
Translates to: PKAQGRLARPSARLR*HRPWQAESLIQIPM
Trigger: CATAGGGATTTGAATTAGGCTTTCTGCTTGCCAAGGCCTGTGGCATCTGAGCCTGGCTGAGGGCCGGGCAAGCCTCCCCTGAGCCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 90 bp GGCCACTACCCAGTGACCAATTCCTGTCCCTTTTTGTGTGTTCTGTaGGCGCTGGAGAGGCAGGCACTTCTGTGGGTAACTGGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: GHYPVTNSCPFLCVL*ALERQALLWVTGGG
Trigger: GCCTCCCCCAGTTACCCACAGAAGTGCCTGCCTCTCCAGCGCTCACAGAACACACAAAAAGGGACAGGAATTGGTCACTGGGTAGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 90 bp GCCAGACGCTGGTCTGGATCGTCAGGAGCCACGGCCACTACCCAGTaGCCAATTCCTGTCCCTTTTTGTGTGTTCTGTGAGCGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: ARRWSGSSGATATTQ*PIPVPFCVFCERWR
Trigger: TCTCCAGCGCTCACAGAACACACAAAAAGGGACAGGAATTGGTCACTGGGTAGTGGCCGTGGCTCCTGACGATCCAGACCAGCGTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 90 bp TGTCCAGCCCCTTGTAGCCCTTGTTGTGTCCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTGACACCCCCACATGCACCACCAGCT +
Preference number: 1 (lower is better)
Translates to: CPAPCSPCCVHISPV*LWSPCLTPPHAPPA
Trigger: AGCTGGTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACAGTCACACTGGAGAAATGTGGACACAACAAGGGCTACAAGGGGCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR TCA 90 bp GTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTaGTCGACCGTGACTCTGGTACAAAGAGGTGTAGTAGGTAAAGTC +
Preference number: 1 (lower is better)
Translates to: VRVVRLPQWGHVDEG*STVTLVQRGVVGKV
Trigger: GACTTTACCTACTACACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596962.5
3UTR GCA 90 bp CATCATCAAGTTGGTCAGGGTACCAGGTGCCCTGATCACTGTCCCTaGACCCCTGTTCCCTGCCTCAGCACCCTCCATGAGGACTCATCA +
Preference number: 1 (lower is better)
Translates to: HHQVGQGTRCPDHCP*TPVPCLSTLHEDSS
Trigger: TGATGAGTCCTCATGGAGGGTGCTGAGGCAGGGAACAGGGGTGCAGGGACAGTGATCAGGGCACCTGGTACCCTGACCAACTTGATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATaGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCA +
Preference number: 1 (lower is better)
Translates to: GKQVNIWPQPWYRSS*IHQTKILPGHLDLP
Trigger: TGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 90 bp CTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: LHQRTGKQVNIWPQP*YRSSWIHQTKILPG
Trigger: CCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 90 bp CTGACTCCTGGGCGAGTGTCCAAAAGCAATCTACATAAAACCCTTTaGCCGCCCGGAATTCCTCCTGCTCAGACATGCCGGGACATGCAG +
Preference number: 1 (lower is better)
Translates to: LTPGRVSKSNLHKTL*PPGIPPAQTCRDMQ
Trigger: CTGCATGTCCCGGCATGTCTGAGCAGGAGGAATTCCGGGCGGCCAAAGGGTTTTATGTAGATTGCTTTTGGACACTCGCCCAGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp GTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTaGCTTGTTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCC +
Preference number: 1 (lower is better)
Translates to: VYTECLVQRGQGQHA*LVLHQAQWVEEGNP
Trigger: GGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR GCA 90 bp TTTTCACCATTGACACTTGCCACCCCTATTCCTCTTCCCAACACCTaGCAAGTCCCACCCACCTTGCAGACCCTTCCTATGCCACCTGTA +
Preference number: 1 (lower is better)
Translates to: FSPLTLATPIPLPNT*QVPPTLQTLPMPPV
Trigger: TACAGGTGGCATAGGAAGGGTCTGCAAGGTGGGTGGGACTTGGCAGGTGTTGGGAAGAGGAATAGGGGTGGCAAGTGTCAATGGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 90 bp CCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: PERPSVFVAIVDFAL*LLQEVQHLLNDGSQ
Trigger: CTGAGAGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR TCA 90 bp GGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTaGGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGT +
Preference number: 1 (lower is better)
Translates to: GTCYVQILGSVPSIH*VLGPKRPRSTRLAC
Trigger: ACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR GCA 90 bp AGCACTGGGATCACAGACATGAACCATCTCCAGGATTCCCCTCCTTaGCGAGAAACTACTGCCATCTGGGACATTTCCTTCACACATCTG +
Preference number: 1 (lower is better)
Translates to: STGITDMNHLQDSPP*RETTAIWDISFTHL
Trigger: CAGATGTGTGAAGGAAATGTCCCAGATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTGGAGATGGTTCATGTCTGTGATCCCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp GGAGCAGAACCAACGGCACCTGCTACGTACAAATACTTGGCTCTGTaGCTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAA +
Preference number: 1 (lower is better)
Translates to: GAEPTAPATYKYLAL*LVYTECLVQRGQGQ
Trigger: TTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATaGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAG +
Preference number: 1 (lower is better)
Translates to: ILKFLHQRTGKQVNI*PQPWYRSSWIHQTK
Trigger: CTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 90 bp TTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGTaGCTGAACTTACATCATCTGAGGAAGTTTACGTCATCTCATCCC +
Preference number: 1 (lower is better)
Translates to: FHCGGRPLSLMGSKM*LNLHHLRKFTSSHP
Trigger: GGGATGAGATGACGTAAACTTCCTCAGATGATGTAAGTTCAGCCACATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp TGCCACAGGCCTTGGCAAGCAGAAAGCCTAATTCAAATCCCTATGTaGAATCTCCTTGAGACAAAGTGTCACGACACAAAACCCCCAGGC +
Preference number: 1 (lower is better)
Translates to: CHRPWQAESLIQIPM*NLLETKCHDTKPPG
Trigger: GCCTGGGGGTTTTGTGTCGTGACACTTTGTCTCAAGGAGATTCCACATAGGGATTTGAATTAGGCTTTCTGCTTGCCAAGGCCTGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp CTCCCCAGGGCACTGGAGTGCAGGTGTAAACATACCAGCTGGTCTTaGTTCCTGGAAGAAACTTCCAAGACTAAAAGGCATCTTGAATCT +
Preference number: 1 (lower is better)
Translates to: LPRALECRCKHTSWS*FLEETSKTKRHLES
Trigger: AGATTCAAGATGCCTTTTAGTCTTGGAAGTTTCTTCCAGGAAGCAAGACCAGCTGGTATGTTTACACCTGCACTCCAGTGCCCTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 90 bp CCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTaGTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTA +
Preference number: 1 (lower is better)
Translates to: PATYKYLALCLVYTE*LVQRGQGQHAWLVL
Trigger: TAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR TCA 90 bp TACGTCATCTCATCCCTGCCTGGTAAGTTCAAGGTTACCAGGAAGTaGGATAAAAATCAACTCCTGACTCCTGGGCGAGTGTCCAAAAGC +
Preference number: 1 (lower is better)
Translates to: YVISSLPGKFKVTRK*DKNQLLTPGRVSKS
Trigger: GCTTTTGGACACTCGCCCAGGAGTCAGGAGTTGATTTTTATCTCACTTCCTGGTAACCTTGAACTTACCAGGCAGGGATGAGATGACGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp GAAACTGATTTCCAGAACGTGCATTTCACTCAATTACTTTCACTGTaGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGTGGCTGAA +
Preference number: 1 (lower is better)
Translates to: ETDFQNVHFTQLLSL*GSSSLPNGQQDVAE
Trigger: TTCAGCCACATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAGTGAAATGCACGTTCTGGAAATCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 90 bp GGGCACTGGAGTGCAGGTGTAAACATACCAGCTGGTCTTGCTTCCTaGAAGAAACTTCCAAGACTAAAAGGCATCTTGAATCTACTTTTC +
Preference number: 1 (lower is better)
Translates to: GHWSAGVNIPAGLAS*KKLPRLKGILNLLF
Trigger: GAAAAGTAGATTCAAGATGCCTTTTAGTCTTGGAAGTTTCTTCCAGGAAGCAAGACCAGCTGGTATGTTTACACCTGCACTCCAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp GGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATCGACCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 2 (lower is better)
Translates to: GPRCTASPVGARGRRLIDLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...GTCGATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCCCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: KESQPASHIPGWPQKGPGPGWPP*SRQLCP
Trigger: GGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGG...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR CCA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 2 (lower is better)
Translates to: KESQPASHIPGWPQKGPGLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR CAA 90 bp TGCCCAGCCCTGCCTCTCCAAGTGGCCTCAGGTTTGTTCCAGCCCTaGATTGGAGCAGGTGGGCTAGGTGGCCCCAAGCTCAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: CPALPLQVASGLFQP*IGAGGLGGPKLSPP
Trigger: GGGTGGGCTGAGCTTGGGGCCACCTAGCCCACCTGCTCCAATCAAGGGCTGGAACAAACCTGAGGCCACTTGGAGAGGCAGGGCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 90 bp GAGGATGGGTGGCTGCATGGGGCAACCTGGCAAAGACCTGCCTCCTaGACCATGATCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: EDGWLHGATWQRPAS*TMISTPCWPSRSSQ
Trigger: CTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTGCCAGGTTGCCCCATGCAGCCACCCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR GCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGTGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 2 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR GCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTCCTCTTCCCAACACCTaGCAAGTCCCACCCACCTTG +
Preference number: 2 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAPLPNT*QVPPTL
Trigger: CAAGGTGGGTGGGACTTGGCAGGTGTTGGGAAGAGG...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTAGCCTCCCAGGTAGCTaGGATTACAGGCACGCACCA +
Preference number: 2 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEASLPGS*DYRHAP
Trigger: TGGTGCGTGCCTGTAATCCCAGCTACCTGGGAGGCT...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGGTACGGCTTCCCCAGTaGGGGCACGTGGACGAAGGC +
Preference number: 2 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWVRLPQ*GHVDEG
Trigger: GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp TGGAGCCCGGGGCAGGTGCTTAGCTCAGTTCAGGCCTGGCACATCCCCTTCCCCCTCATAGCTTGGTGTTaGAAGGACCACGACCCCCAT +
Preference number: 2 (lower is better)
Translates to: WSPGQVLSSVQAWHIPFPLIAWC*KDHDPH
Trigger: ATGGGGGTCGTGGTCCTTTCAACACCAAGCTATGAG...GGGGAAGGGGATGTGCCAGGCCTGAACTGAGCTAAGCACCTGCCCCGGGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp CAGGAGGTCCAACATCTCCTCAATGATGGCTCTCAGTGCCCTGCCCAGCTGGTCCACGTGGACGAAGGCTaGTCGACCGTGACTCTGCCG +
Preference number: 2 (lower is better)
Translates to: QEVQHLLNDGSQCPAQLVHVDEG*STVTLP
Trigger: CGGCAGAGTCACGGTCGATCAGCCTTCGTCCACGTG...GACCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGGACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600283.6
3UTR-3UTR GCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLTSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR GCA 90 bp AGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATTATCTGCCGGCATCCTaGGAGATGGTCACCGACACA +
Preference number: 2 (lower is better)
Translates to: SWSALYGFPSGGTWTKADYLPAS*EMVTDT
Trigger: TGTGTCGGTGACCATCTCGCAGGATGCCGGCAGATA...ATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596962.5
3UTR-3UTR CCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCCCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIPGWPP*SRQLCP
Trigger: GGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGG...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 2 (lower is better)
Translates to: ERARLLSTVQGRGRIERLLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR CCA 90 bp AAAGCAGACAAAATCCGCCTTTCCACAGGTGGCCCTGGTCTCCATGGCGACAGCTCCCACCCCGTTGCCTaGCCACGGACCCCATGCCTT +
Preference number: 2 (lower is better)
Translates to: KADKIRLSTGGPGLHGDSSHPVA*PRTPCL
Trigger: AAGGCATGGGGTCCGTGGCCAGGCAACGGGGTGGGA...GCTGTCGCCATGGAGACCAGGGCCACCTGTGGAAAGGCGGATTTTGTCTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 2 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQSSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCCCAGCACCAAAACCCTaGAGCTCCAGGCCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSPAPKP*SSRPEV
Trigger: TACTTCTGGCCTGGAGCTTCAGGGTTTTGGTGCTGG...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp CAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGGGCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 2 (lower is better)
Translates to: QLFPTFKRGHSFPSQKLGLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...CCCCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTCTGGTCTTGAACTCCTaGCTCAAGGGATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEALVLNS*LKGFSC
Trigger: GCAGGAGAATCCCTTGAGCCAGGAGTTCAAGACCAG...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 2 (lower is better)
Translates to: SRPNVVTRLHTASMSMMEGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp AGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SWSALYGFPSGGTWTKADIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...ATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCTGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 2 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSCGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR GCA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGGCAGTCCCACCCCGTTaGCTGGCCACGGACCCCATG +
Preference number: 2 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMAVPPR*LATDPM
Trigger: CATGGGGTCCGTGGCCAGGCAACGGGGTGGGACTGC...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR GCA 90 bp ATCCATGTCGATGATGGAGTCAATGCTTTCAGGCCCGTCCTCCACGCAGCACTGACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: IHVDDGVNAFRPVLHAALTSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...CAGTGCTGCGTGGAGGACGGGCCTGAAAGCATTGACTCCATCATCGACATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR GCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 2 (lower is better)
Translates to: ERARLLSTVQGRGRIERLWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600283.6
3UTR-3UTR CCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACCCCAGTGGGGGCACGTaGACGAAGGCTGATCGACCG +
Preference number: 2 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHPSGGT*TKADRP
Trigger: CGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGG...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 2 (lower is better)
Translates to: ERARLLSTVQGRGRIERLGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR TCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: ERARLLSTVQGRGRIERLPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600283.6
3UTR-3UTR CCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp TCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: SPTDRKAGEHMAPAVVSQELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...CTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp GCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAAATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 2 (lower is better)
Translates to: ASLVTAAVSPDAGRKMGEIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...TTCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGAAGCCATATCCCAGGGTaGCCCCAGAAAGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGSHIPG*PQKGPG
Trigger: GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCT...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR CCA 90 bp AGTGGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAACCAGGCTCAGTGGGTaGAGGAGGGAAATCCCCACT +
Preference number: 2 (lower is better)
Translates to: SGQIHESQEQNQRHLLRTTRLSG*RREIPT
Trigger: AGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGT...TGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CAA 90 bp GCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCTGTaGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAAT +
Preference number: 2 (lower is better)
Translates to: ASQPYPRVAPERARL*STVQGRGRIERLLN
Trigger: ATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR CCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 2 (lower is better)
Translates to: APERARLLSTVQGRGRIEIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR CCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATGGCAGGAGGCAAAAGTaGCATCACCCTGGTGGGCGA +
Preference number: 2 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDGRRQK*HHPGGR
Trigger: TCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCC...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
3UTR-3UTR CCA 90 bp GTGACAACTGTCCTGGAAACCAGGGGACAGAGTCTCTCAGCAGGTATGTTCAGCGGATGGGTGGCTGCATaGGGCAACCTGGCAAAGACC +
Preference number: 2 (lower is better)
Translates to: VTTVLETRGQSLSAGMFSGWVAA*GNLAKT
Trigger: GGTCTTTGCCAGGTTGCCCCATGCAGCCACCCATCC...GCTGAACATACCTGCTGAGAGACTCTGTCCCCTGGTTTCCAGGACAGTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 90 bp TGCGAGATGGTCACCGACACATCCAGGCCCAACGTGGTGACTCGCTaGCACACAGCATCCATGTCGATGATGGAGTCAATGCTTTCAGGC +
Preference number: 2 (lower is better)
Translates to: CEMVTDTSRPNVVTR*HTASMSMMESMLSG
Trigger: GCCTGAAAGCATTGACTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTCGGTGACCATCTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR CAA 90 bp ACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTaGTTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACT +
Preference number: 2 (lower is better)
Translates to: TLSAWSKEAKVNTLG*FYTRLSGWRREIPT
Trigger: AGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR-3UTR TCA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 2 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCAGGTCGAGGACGCATTaGGAGGCTTTTAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: KESQPASHIPGWPQKGPGRSRTH*EAFKFG
Trigger: ACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCT...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCAAGGCTGATCGACCGTaGCTCTGGTACAAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPKADRP*LWYKEV
Trigger: CACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTT...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596962.5
3UTR-3UTR CCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp TTAAGTCCAATTTTCAGGGCAGGAGGCAAAAGTGGCATCACCCTGGTGGGCGAGGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LSPIFRAGGKSGITLVGEDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...CTCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCCCTGAAAATTGGACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
3UTR-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGAGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 2 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 2 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
3UTR-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp GTGACAACTGTCCTGGAAACCAGGGGACAGAGTCTCTCAGCAGGTATGTTCAGCTGGACTACAGTGGTGTaGTCATGGCTCACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: VTTVLETRGQSLSAGMFSWTTVV*SWLTGA
Trigger: AGCCCCAGTGAGCCATGATCACACCACTGTAGTCCA...GCTGAACATACCTGCTGAGAGACTCTGTCCCCTGGTTTCCAGGACAGTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCCAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR CAA 90 bp AAAGTGCGCAGACTTGGGCATCTTAAAAGAGATGCCATCATCAAGTaGGTCAGGGTACCAGGTGCCCTGATCACTGTCCCTGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: KVRRLGHLKRDAIIK*VRVPGALITVPAPL
Trigger: CAGGGGTGCAGGGACAGTGATCAGGGCACCTGGTACCCTGACCAACTTGATGATGGCATCTCTTTTAAGATGCCCAAGTCTGCGCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 2 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGAGGTCGAGGACGCATTaGGAGGCTTTTAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWRSRTH*EAFKFG
Trigger: ACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCT...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR TCA 90 bp GGTCACCGACACATCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 2 (lower is better)
Translates to: GHRHIQAQRGDSLAHSIHVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...ATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTCGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 2 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCCAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR GCA 90 bp AGCGGCAGTTGTCCAGCCCCTTGTAGCCCTTGTTGTGTCCACATTTCTCCAGTGATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 2 (lower is better)
Translates to: SGSCPAPCSPCCVHISPVILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...CACTGGAGAAATGTGGACACAACAAGGGCTACAAGGGGCTGGACAACTGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR GCA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTAATGATGGCTCTCAGTaGCCTGCCCAGCTGGTCCGC +
Preference number: 2 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFNDGSQ*PAQLVR
Trigger: GCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATT...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 2 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTATGCACCACCACATCTaGCTAATTCTTGTATGTTTT +
Preference number: 2 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAMHHHI*LILVCF
Trigger: AAAACATACAAGAATTAGCCAGATGTGGTGGTGCAT...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCAGGTCGAGGACGCATTaGGAGGCTTTTAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPRSRTH*EAFKFG
Trigger: ACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCT...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR TCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CCA 90 bp GGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAAATACAAGGTCAACACGCTTaGCTTGTTCTACACCAGGCT +
Preference number: 2 (lower is better)
Translates to: GRSMSPRSRTNGTCYVQIQGQHA*LVLHQA
Trigger: AGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTG...TATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR-3UTR TCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGAAAGGGCCAGGCTGTTaGGCACAGTTCAAGGTCGAG +
Preference number: 2 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQKGPGC*AQFKVE
Trigger: CTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTT...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR TCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCCCACACGCATGCAACTaGCCTTCTTTGGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFPHACN*PSLGWG
Trigger: TCCCCACCCCAAAGAAGGTCAGTTGCATGCGTGTGG...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
3UTR-3UTR CCA 90 bp TTCAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGATGAGCCACTGCGCCTaGCCAAGACATGGCATCTTA +
Preference number: 2 (lower is better)
Translates to: FSCSPHSKEATASLHRSWMSHCA*PRHGIL
Trigger: TAAGATGCCATGTCTTGGCCAGGCGCAGTGGCTCAT...CCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp GGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAAATATATACACTGAGTGCTTaGTCCAAAGAGGCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: GRSMSPRSRTNGTCYVQIYTLSA*SKEAKV
Trigger: GACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATA...TATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CAA 90 bp AAGCACTGGGATCACAGACATGAACCATCTCCAGGATTCCCCTCCTaGCCGAGAAACTACTGCCATCTGGGACATTTCCTTCACACATCT +
Preference number: 2 (lower is better)
Translates to: KHWDHRHEPSPGFPS*PRNYCHLGHFLHTS
Trigger: AGATGTGTGAAGGAAATGTCCCAGATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTGGAGATGGTTCATGTCTGTGATCCCAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR GCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATGGACATGCAGAGCTCTaGCAACTCCAGCCCCCGCGC +
Preference number: 2 (lower is better)
Translates to: HHIWLILVCFGRYGISCYGHAEL*QLQPPR
Trigger: GCGCGGGGGCTGGAGTTGGCAGAGCTCTGCATGTCC...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 2 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
3UTR-3UTR CCA 90 bp CTGAACTTACATCATCTGAGGAAGTTTACGTCATCTCATCCCTGCCTGGTAAGTTGGCCCTGGTCTCCATaGCGACAGCTCATAGCTTGG +
Preference number: 2 (lower is better)
Translates to: LNLHHLRKFTSSHPCLVSWPWSP*RQLIAW
Trigger: CCAAGCTATGAGCTGTCGCCATGGAGACCAGGGCCA...ACTTACCAGGCAGGGATGAGATGACGTAAACTTCCTCAGATGATGTAAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 90 bp GCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTGCTaGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACAC +
Preference number: 2 (lower is better)
Translates to: ATYKYLALCLVYTEC*VQRGQGQHAWLVLH
Trigger: GTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR-3UTR TCA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600283.6
3UTR-3UTR TCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGGGACAGGAAAGCAGGTaGACATATGGCCCCAGCCGT +
Preference number: 2 (lower is better)
Translates to: RKKARKKERKKERKPASQGQESR*TYGPSR
Trigger: ACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCC...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR-3UTR TCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCATAAAAATCAACTCCTaGCTCCTGGGCGAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFIKINS*LLGECP
Trigger: TGGACACTCGCCCAGGAGTCAGGAGTTGATTTTTAT...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR TCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 2 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR TCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCAAGGAAGGTGAACGCTaGAGAAAACAAAACTCTCAG +
Preference number: 2 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFKEGER*RKQNSQ
Trigger: CTGAGAGTTTTGTTTTCTTCAGCGTTCACCTTCCTT...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGTGGTATCGCAGCTCATaGATTCACCAGACCAAGATT +
Preference number: 2 (lower is better)
Translates to: RKKARKKERKKERKPASQWYRSS*IHQTKI
Trigger: AATCTTGGTCTGGTGAATCCATGAGCTGCGATACCA...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR GCA 72 bp CGCCCGGAATTCCTCCTGCTCAGACATGCCGGGACATaGAGAGCTCTGCCAACTCCAGCCCCCGCGCCCCCG +
Preference number: 3 (lower is better)
Translates to: RPEFLLLRHAGT*RALPTPAPAPP
Trigger: CGGGGGCGCGGGGGCTGGAGTTGGCAGAGCTCTGCATGTCCCGGCATGTCTGAGCAGGAGGAATTCCGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp GGGCACTGGGCAGCGCCTGCCCCTCAACAGCCATTCTaGCAAGGGTCTAAGTGGAACCCCAGCCCTCGGCCG +
Preference number: 3 (lower is better)
Translates to: GHWAAPAPQQPF*QGSKWNPSPRP
Trigger: CGGCCGAGGGCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGCCCAGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 72 bp GTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTaGTCGACCGTGACTCTGCCGGCATCCTGCGAGATG +
Preference number: 3 (lower is better)
Translates to: VRLPQWGHVDEG*STVTLPASCEM
Trigger: CATCTCGCAGGATGCCGGCAGAGTCACGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600283.6
3UTR CCA 72 bp GAGTCAATGCTTTCAGGCCCGTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGGCAGTTGTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: ESMLSGPSSTQH*EPGQKRQLSSP
Trigger: GGGGCTGGACAACTGCCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGACGGGCCTGAAAGCATTGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR GCA 72 bp ACCCTTTGGCCGCCCGGAATTCCTCCTGCTCAGACATaGCGGGACATGCAGAGCTCTGCCAACTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: TLWPPGIPPAQT*RDMQSSANSSP
Trigger: GGGGCTGGAGTTGGCAGAGCTCTGCATGTCCCGGCATGTCTGAGCAGGAGGAATTCCGGGCGGCCAAAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 72 bp ACCCCACCTCTGAATGGCTTGGGCCAGACGCTGGTCTaGATCGTCAGGAGCCACGGCCACTACCCAGTGACC +
Preference number: 3 (lower is better)
Translates to: TPPLNGLGQTLV*IVRSHGHYPVT
Trigger: GGTCACTGGGTAGTGGCCGTGGCTCCTGACGATCCAGACCAGCGTCTGGCCCAAGCCATTCAGAGGTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 72 bp ATCTCCTCAATGATGGCTCTCAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACG +
Preference number: 3 (lower is better)
Translates to: ISSMMALSALPS*SALYGFPSGGT
Trigger: CGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR TCA 72 bp GGGGACCGTGATGGTGGGGAGAAGTGGGCAGATCCATaGGTCCCAGGAGCAGAACCAACGGCACCTGCTACG +
Preference number: 3 (lower is better)
Translates to: GDRDGGEKWADP*VPGAEPTAPAT
Trigger: CGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCCACTTCTCCCCACCATCACGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR GCA 72 bp GGATGGGTGGCTGCATGGGGCAACCTGGCAAAGACCTaGCTCCTTGACCATGATCAGCACCCCATGCTGGCC +
Preference number: 3 (lower is better)
Translates to: GWVAAWGNLAKT*LLDHDQHPMLA
Trigger: GGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTGCCAGGTTGCCCCATGCAGCCACCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 72 bp CCCTGGTCTCCATGGCGACAGCTCATAGCTTGGTGTTaGAAGGACCACGACCCCCATGGCCACATCTGGGGC +
Preference number: 3 (lower is better)
Translates to: PWSPWRQLIAWC*KDHDPHGHIWG
Trigger: GCCCCAGATGTGGCCATGGGGGTCGTGGTCCTTTCAACACCAAGCTATGAGCTGTCGCCATGGAGACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp AGGTGCCCTGATCACTGTCCCTGCACCCCTGTTCCCTaGCTCAGCACCCTCCATGAGGACTCATCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: RCPDHCPCTPVP*LSTLHEDSSGK
Trigger: CTTCCCTGATGAGTCCTCATGGAGGGTGCTGAGGCAGGGAACAGGGGTGCAGGGACAGTGATCAGGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp CAAAGACCTGCCTCCTTGACCATGATCAGCACCCCATaGTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: QRPASLTMISTP*WPSRSSQRPQD
Trigger: ATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp CAGGAGGTCCAACATCTCCTCAATGATGGCTCTCAGTaGCCTGCCCAGCTGGTCCGCGTTGTACGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: QEVQHLLNDGSQ*PAQLVRVVRLP
Trigger: GGGAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGGACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR CCA 72 bp TCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGGCTGGCCTCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: SQLMDSPDQDSP*ASGPPRLASLV
Trigger: GACCAGGGAGGCCAGCCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 72 bp TCTCCAAGTGGCCTCAGGTTTGTTCCAGCCCTTGATTaGAGCAGGTGGGCTAGGTGGCCCCAAGCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: SPSGLRFVPALD*SRWARWPQAQP
Trigger: GGGCTGAGCTTGGGGCCACCTAGCCCACCTGCTCCAATCAAGGGCTGGAACAAACCTGAGGCCACTTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 72 bp AGACCTGCCTCCTTGACCATGATCAGCACCCCATGCTaGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGA +
Preference number: 3 (lower is better)
Translates to: RPASLTMISTPC*PSRSSQRPQDR
Trigger: TCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCCCAGGATTCCCCTCCTaGCCGAGAAACTACTGCCAT +
Preference number: 3 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPPGFPS*PRNYCH
Trigger: ATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTGG...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATCCCAGCTGGTCCGCGTaGTACGGCTTCCCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDPSWSA*YGFPSG
Trigger: CCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGG...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR GCA 72 bp ACTCATTTCCACCTGTCAGTTACAGTCCACACCCACTaGCAGGCGCCCACTGCAAGTCACCCGCCAGCATCC +
Preference number: 3 (lower is better)
Translates to: THFHLSVTVHTH*QAPTASHPPAS
Trigger: GGATGCTGGCGGGTGACTTGCAGTGGGCGCCTGGCAGTGGGTGTGGACTGTAACTGACAGGTGGAAATGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGGAAAGGGCCAGGCTGTaGAGCACAGTTCAAGGTCGA +
Preference number: 3 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWERARL*STVQGR
Trigger: TCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR TCA 72 bp GTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTaGTCGACCGTGACTCTGGTACAAAGAGGTGTAGTA +
Preference number: 3 (lower is better)
Translates to: VRLPQWGHVDEG*STVTLVQRGVV
Trigger: TACTACACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596962.5
3UTR-3UTR CAA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 3 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CAA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCCATTTTGTCCCTGTCTaGGCTAGACCTGTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPHFVPV*ARPVFS
Trigger: GGAGAAAACAGGTCTAGCCAAGACAGGGACAAAATG...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCCCTGTCTTTTCACCATaGACACTTGCCACCCCTATT +
Preference number: 3 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSPVFSP*TLATPI
Trigger: AATAGGGGTGGCAAGTGTCAATGGTGAAAAGACAGG...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp TGGTGGGGAGAAGTGGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCGTATACACTGAGTGCTaGGTCCAAAGAGGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: WWGEVGRSMSPRSRTNGTVYTEC*VQRGQG
Trigger: ACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATAC...GGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCCACTTCTCCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CCA 72 bp GAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTaGCTTGTTCTACACCAGGCTCAGTGGGTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: ECLVQRGQGQHA*LVLHQAQWVEE
Trigger: CTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CCA 72 bp GTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATaGATTCACCAGACCAAGATTCTCCCTGGGCATCTG +
Preference number: 3 (lower is better)
Translates to: VNIWPQPWYRSS*IHQTKILPGHL
Trigger: CAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 72 bp GGGCGAGTGTCCAAAAGCAATCTACATAAAACCCTTTaGCCGCCCGGAATTCCTCCTGCTCAGACATGCCGG +
Preference number: 3 (lower is better)
Translates to: GRVSKSNLHKTL*PPGIPPAQTCR
Trigger: CCGGCATGTCTGAGCAGGAGGAATTCCGGGCGGCCAAAGGGTTTTATGTAGATTGCTTTTGGACACTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 72 bp TGGTCTGGATCGTCAGGAGCCACGGCCACTACCCAGTaGCCAATTCCTGTCCCTTTTTGTGTGTTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: WSGSSGATATTQ*PIPVPFCVFCE
Trigger: CTCACAGAACACACAAAAAGGGACAGGAATTGGTCACTGGGTAGTGGCCGTGGCTCCTGACGATCCAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 72 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATTCACCAGACCAAGATT +
Preference number: 3 (lower is better)
Translates to: RTGKQVNIWPQP*YRSSWIHQTKI
Trigger: AATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 72 bp TTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATaGCCCCAGCCGTGGTATCGCAGCTCATGGATTCAC +
Preference number: 3 (lower is better)
Translates to: FLHQRTGKQVNI*PQPWYRSSWIH
Trigger: GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR CCA 72 bp AAAGTCAAAAGCAGACAAAATCCGCCTTTCCACAGGTaGCCCTGGTCTCCATGGCGACAGCTCATAGCTTGG +
Preference number: 3 (lower is better)
Translates to: KVKSRQNPPFHR*PWSPWRQLIAW
Trigger: CCAAGCTATGAGCTGTCGCCATGGAGACCAGGGCCACCTGTGGAAAGGCGGATTTTGTCTGCTTTTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 3 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
3UTR-3UTR CAA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 3 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQNVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
3UTR TCA 72 bp GGCCCACAGACCAGACCTTTGAGGAATAGAGCAAGATaGAACCTGAAGTTGCTTTCCACCAGACCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: GPQTRPLRNRAR*NLKLLSTRPLG
Trigger: ACCCAGAGGTCTGGTGGAAAGCAACTTCAGGTTTCATCTTGCTCTATTCCTCAAAGGTCTGGTCTGTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp CCAACGGCACCTGCTACGTACAAATACTTGGCTCTGTaGCTAGTATACACTGAGTGCTTGGTCCAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: PTAPATYKYLAL*LVYTECLVQRG
Trigger: GCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CCA 72 bp GGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGTaGCTGAACTTACATCATCTGAGGAAGTTTACGTCA +
Preference number: 3 (lower is better)
Translates to: GGRPLSLMGSKM*LNLHHLRKFTS
Trigger: TGACGTAAACTTCCTCAGATGATGTAAGTTCAGCCACATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR-3UTR CAA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCGATGCCATCATCAAGTaGGTCAGGGTACCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFDAIIK*VRVPGA
Trigger: GGCACCTGGTACCCTGACCAACTTGATGATGGCATC...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp ATCACAGACATGAACCATCTCCAGGATTCCCCTCCTTaGCGAGAAACTACTGCCATCTGGGACATTTCCTTC +
Preference number: 3 (lower is better)
Translates to: ITDMNHLQDSPP*RETTAIWDISF
Trigger: GAAGGAAATGTCCCAGATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTGGAGATGGTTCATGTCTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR GCA 72 bp AGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTaGTACGTACAAATACTTGGCTCTGTGCCTAGTATA +
Preference number: 3 (lower is better)
Translates to: RSMSPRSRTNGT*YVQILGSVPSI
Trigger: TATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR-3UTR CAA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTACCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 3 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
3UTR TCA 72 bp ATGAAACCTGAAGTTGCTTTCCACCAGACCTCTGGGTaGCCCCTGAGTCTTCAGTTGTTCCCCACATTCAAA +
Preference number: 3 (lower is better)
Translates to: MKPEVAFHQTSG*PLSLQLFPTFK
Trigger: TTTGAATGTGGGGAACAACTGAAGACTCAGGGGTCACCCAGAGGTCTGGTGGAAAGCAACTTCAGGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR TCA 72 bp CCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAACATCTCCTCAATGAT +
Preference number: 3 (lower is better)
Translates to: PSVFVAIVDFAL*LLQEVQHLLND
Trigger: ATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAACTATTGCCACAAACACTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
3UTR GCA 72 bp TACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTaGTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGG +
Preference number: 3 (lower is better)
Translates to: YKYLALCLVYTE*LVQRGQGQHAW
Trigger: CCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR-3UTR CAA 90 bp ACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTGCTTGGTCCAAAGAGTCAACACGCTTGGCTaGTTCTACACCAGGCTCAGT +
Preference number: 3 (lower is better)
Translates to: TYKYLALCLVYTECLVQRVNTLG*FYTRLS
Trigger: ACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGAC...TCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR TCA 72 bp AGAAAGCCTAATTCAAATCCCTATGTGGAATCTCCTTaGGACAAAGTGTCACGACACAAAACCCCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: RKPNSNPYVESP*DKVSRHKTPRP
Trigger: GGGCCTGGGGGTTTTGTGTCGTGACACTTTGTCTCAAGGAGATTCCACATAGGGATTTGAATTAGGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CCA 72 bp CCTTGGCAAGCAGAAAGCCTAATTCAAATCCCTATGTaGAATCTCCTTGAGACAAAGTGTCACGACACAAAA +
Preference number: 3 (lower is better)
Translates to: PWQAESLIQIPM*NLLETKCHDTK
Trigger: TTTTGTGTCGTGACACTTTGTCTCAAGGAGATTCCACATAGGGATTTGAATTAGGCTTTCTGCTTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATCGACACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: GPRCTASPVGARGRRLIDTAFLG*SMAGSG
Trigger: GCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGT...GTCGATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGGCTCAGGGGAGGCTTaGCCGGCCCTCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWGSGEA*PALSQA
Trigger: AGCCTGGCTGAGGGCCGGGCAAGCCTCCCCTGAGCC...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LPSWSALYGFPSGGTWTKAVPRT*FCCDWR
Trigger: GCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGC...CTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TCTCAGTGCCCTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: SQCPAQLVRVVRLPQWGHSALPS*SALYGF
Trigger: GAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACT...GTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGCCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWPGWPP*SRQLCP
Trigger: GGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGG...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPTAFLG*SMAGSG
Trigger: GCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGT...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCGCAGTCCCACCCCGTTaGCTGGCCACGGACCCCATG +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPAVPPR*LATDPM
Trigger: CATGGGGTCCGTGGCCAGGCAACGGGGTGGGACTGC...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGCGGACCTGCTTCTGTTaGGACTGGCGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWRTCFC*DWRDSC
Trigger: GCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCG...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCCTGCCAGGCGCCCACTaGAAGTCACCCGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: KESQPASHIPGWPQKGPGLPGAH*KSPASI
Trigger: GATGCTGGCGGGTGACTTGCAGTGGGCGCCTGGCAG...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGCACTGGGCAGCGCCTaGCCCTCAACAGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWALGSA*PSTAIL
Trigger: CAGAATGGCTGTTGAGGGGCAGGCGCTGCCCAGTGC...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGATCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRSSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GTCGATGATGGAGTCAATGCTTTCAGGCCCGTCCTCCACGCAGCACTGGGAGCCCCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VDDGVNAFRPVLHAALGAPGWPP*SRQLCP
Trigger: GGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGG...GGCTCCCAGTGCTGCGTGGAGGACGGGCCTGAAAGCATTGACTCCATCATCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPSWSALYGFPSGGTWTKDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...CTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGAGCCATATCCCAGGGTaGCCCCAGAAAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWSHIPG*PQKGPG
Trigger: GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCT...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTCATGTTGCCCAGGGCTaGTCTCGAACTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAHVAQG*SRTPGL
Trigger: GAGCCCGGGAGTTCGAGACCAGCCCTGGGCAACATG...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCTGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSCGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGATGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRCGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGACCTGCCTCAGCCTCCTaGGTATCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRPASAS*VSGTTG
Trigger: GCCTGTGGTCCCAGATACTCAGGAGGCTGAGGCAGG...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTTGCACCCCTGTTCCCTaGCTCAGCACCCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEACTPVP*LSTLHE
Trigger: CTCATGGAGGGTGCTGAGGCAGGGAACAGGGGTGCA...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACTCACTCCCACCCCACCACAGGGCCCTACCTaGCGGCATCCTGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: STPGSVGGGGKSPLTPTPPQGPT*RHPARW
Trigger: CCATCTCGCAGGATGCCGGCAGGTAGGGCCCTGTGG...TGGGGTGGGAGTGAGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGATGCTTCTGTTGCGACTaGCGCGACAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRCFCCD*RDSCCR
Trigger: GCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCA...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCTGCTTCTGTTGCGACTaGCGCGACAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSCFCCD*RDSCCR
Trigger: GCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCA...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: AQLVRVVRLPQWGHVDEGAGMSL*TVWYST
Trigger: GGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGC...GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCAGCCATATCCCAGGGTaGCCCCAGAAAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KESQPASHIPGWPQKGPGSHIPG*PQKGPG
Trigger: GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCT...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCAAAGTGGCATCACCCTaGTGGGCGAGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSKVASP*WASGGG
Trigger: CCCACCCCCACTCGCCCACCAGGGTGATGCCACTTT...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGGCAGGAGGCAAAAGTaGCATCACCCTGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWGRRQK*HHPGGR
Trigger: TCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCC...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR CCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCATCAGCACCCCATGCTaGCCGTCACGCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPISTPC*PSRSSQ
Trigger: CTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGAT...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCTGCCAAGGGTCTAAGTaGAACCCCAGCCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSCQGSK*NPSPRP
Trigger: CGGCCGAGGGCTGGGGTTCCACTTAGACCCTTGGCA...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTGGGAGCAGTTTGGGGTaGGACTGGGTCCCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAGSSLG*DWVPQV
Trigger: GACTTGAGGGACCCAGTCCCACCCCAAACTGCTCCC...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGACCAGGCCCAACGTGGTaGCTCGCTTGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRPGPTW*LACTQH
Trigger: ATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGG...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTCCACACGCATGCAACTaGCCTTCTTTGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAPHACN*PSLGWG
Trigger: TCCCCACCCCAAAGAAGGTCAGTTGCATGCGTGTGG...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAATGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: ASLVTAAVSPDAGRKMGEWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...TTCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAAATGACAGCTGCTGCCGCTaGAGCCTCTCGGCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: GQIHESQEQNQRHLLRTNDSCCR*SLSAAR
Trigger: TCGCGCGGCCGAGAGGCTGCAGCGGCAGCAGCTGTC...ATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp TGGAGCCCGGGGCAGGTGCTTAGCTCAGTTCAGGCCTGGCACATCCCCTTCCCCCTCAAGCGATCAGTCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WSPGQVLSSVQAWHIPFPLKRSV*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGACTGATCGCTTGAG...GGGGAAGGGGATGTGCCAGGCCTGAACTGAGCTAAGCACCTGCCCCGGGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCCCCAGTGGGGGCACGTaGACGAAGGCTGATCGACCG +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGPSGGT*TKADRP
Trigger: CGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGG...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TCTCAGTGCCCTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGAACTGCAATCCAACTaGCGTTCACGGTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SQCPAQLVRVVRLPQWGHELQSN*RSRCVP
Trigger: GGGAACACACCGTGAACGCCAGTTGGATTGCAGTTC...GTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCTTCCACAGGTGGCCCTaGTCTCCATGGCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPFHRWP*SPWRQL
Trigger: GAGCTGTCGCCATGGAGACCAGGGCCACCTGTGGAA...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 72 bp TGGCTGCATGGGGCAACCTGGCAAAGACCTGCCTCCTaGACCATGATCAGCACCCCATGCTGGCCGTCACGC +
Preference number: 4 (lower is better)
Translates to: WLHGATWQRPAS*TMISTPCWPSR
Trigger: GCGTGACGGCCAGCATGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTGCCAGGTTGCCCCATGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCGGGTACCAGGTGCCCTaGTCACTGTCCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPGYQVP*SLSLHP
Trigger: GGGGTGCAGGGACAGTGATCAGGGCACCTGGTACCC...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGTGGGCAGGCAGAGAGTaGACTCGGCTTCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMWAGRE*TRLPKA
Trigger: AGCCTTTGGAAGCCGAGTTCACTCTCTGCCTGCCCA...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCAGGGAGAAGCCACACTaGGCCTGGAGGGACCGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSREKPH*AWRDRA
Trigger: GGCCCGGTCCCTCCAGGCTCAGTGTGGCTTCTCCCT...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ATGGTCACCGACACATCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCCACGTGGACGAAGGCTaGTCGACCGTGACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: MVTDTSRPNVVTRLHTASHVDEG*STVTLP
Trigger: CGGCAGAGTCACGGTCGATCAGCCTTCGTCCACGTG...GGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTCGGTGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600283.6
CDS-3UTR GCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGGGIGL*LGPASV
Trigger: AACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCC...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSTAFLG*SMAGSG
Trigger: GCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGT...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCAGGCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: VLGPKRPRSTRLACSTPGTAFLG*SMAGSG
Trigger: GCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGT...GCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp AGCGGCAGTTGTCCAGCCCCTTGTAGCCCTTGTTGTGTCCACATTTCTCCAGTGACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: SGSCPAPCSPCCVHISPVTAFLG*SMAGSG
Trigger: GCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGT...CACTGGAGAAATGTGGACACAACAAGGGCTACAAGGGGCTGGACAACTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GAGATATCTGCCGGCATCCTGCGAGATGGTCACCGACACATCCAGGCCCAACGTACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: EISAGILRDGHRHIQAQRTSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...ACGTTGGGCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCGGCAGATATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596962.5
CDS-3UTR GCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: APERARLLSTVQGRGRIETSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGTGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: APERARLLSTVQGRGRIEWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCCCTCCTGCTCAGACATaGCGGGACATGCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPPPAQT*RDMQSS
Trigger: AGAGCTCTGCATGTCCCGGCATGTCTGAGCAGGAGG...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGGGAGCCCGGGGCAGGTaGTTAGCTCAGTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: APERARLLSTVQGRGRIEGARGR*LAQFRP
Trigger: AGGCCTGAACTGAGCTAAGCACCTGCCCCGGGCTCC...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TGGAGCCCGGGGCAGGTGCTTAGCTCAGTTCAGGCCTGGCACATCCCCTTCCCCCTCAAGGGATTCTCCTaGCTCAACCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WSPGQVLSSVQAWHIPFPLKGFS*LNLPKC
Trigger: GCACTTTGGGAGGTTGAGGCAGGAGAATCCCTTGAG...GGGGAAGGGGATGTGCCAGGCCTGAACTGAGCTAAGCACCTGCCCCGGGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTAAAGGGGGCCAGCTGTaGGGGACAGATTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAKGGQL*GTDFHE
Trigger: CTCATGGAAATCTGTCCCGCACAGCTGGCCCCCTTT...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ACGCTTGGCTTGTTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACTTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TLGLFYTRLSGWRREIPTSSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...AGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCCAAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp TCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SPTDRKAGEHMAPAVVSQSSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...CTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDSSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SRPNVVTRLHTASMSMMESSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGCCCAGTGGGGGCACGTaGACGAAGGCTGATCGACCG +
Preference number: 4 (lower is better)
Translates to: SRPNVVTRLHTASMSMMEPSGGT*TKADRP
Trigger: CGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGG...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCGTACGGCTTCCCCAGTaGGGGCACGTGGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPVRLPQ*GHVDEG
Trigger: GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWSALPS*SALYGF
Trigger: GAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACT...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CGTGACTCTGCCGGCATCCTGCGAGATGGTCACCGACACATCCAGGCCCAACGTGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RDSAGILRDGHRHIQAQRELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...ACGTTGGGCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCGGCAGAGTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600283.6
CDS-3UTR CCA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KESQPASHIPGWPQKGPGDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACTCCCACCCCGTTGCCTaGCCACGGACCCCATGCCTT +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDSHPVA*PRTPCL
Trigger: AAGGCATGGGGTCCGTGGCCAGGCAACGGGGTGGGA...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCGTGATCATGGCTCACTaGGGCTTCAACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPVIMAH*GFNLPG
Trigger: GCCTGGGAGGTTGAAGCCCCAGTGAGCCATGATCAC...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPCGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGCCAGGCCCAACGTGGTaGCTCGCTTGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLPGPTW*LACTQH
Trigger: ATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGG...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGCCAACATCTCCTCAATaGTGGCTCTCAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMPTSPQ*WLSVPC
Trigger: GCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGG...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TCCAGGAGGTCCAACATCTCCTCAATGATGGCTCTCAGTGCCCTGCCCAGCTGGGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: SRRSNISSMMALSALPSWGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...CCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGGACCTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGCGGGACAGATTTCCATaGGCCATCCCCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWRDRFP*AIPLHL
Trigger: CAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCG...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDAVPRT*FCCDWR
Trigger: GCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGC...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRGISYT*RSTLSP
Trigger: TGGCGACAGCGTGGACCTGCATGTGTACGAGATTCC...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGATATCTGCCGGCATCCTaGGAGATGGTCACCGACACA +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRYLPAS*EMVTDT
Trigger: TGTGTCGGTGACCATCTCGCAGGATGCCGGCAGATA...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
CDS-3UTR GCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGTGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: SRPNVVTRLHTASMSMMEWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGAATGATGGCTCTCAGTaGCCTGCCCAGCTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWNDGSQ*PAQLVR
Trigger: GCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATT...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCAGACATGCCGGGACATaGAGAGCTCTGCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPRHAGT*RALPTP
Trigger: TGGAGTTGGCAGAGCTCTGCATGTCCCGGCATGTCT...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCACAGTCCACACCCACTaGCAGGCGCCCACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGTVHTH*QAPTAS
Trigger: ACTTGCAGTGGGCGCCTGGCAGTGGGTGTGGACTGT...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGATCCCATCTCTGAACTaGAATCCAACTGGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPSWSALYGFPSGGTWTKIPSLN*NPTGVH
Trigger: GTGAACGCCAGTTGGATTGCAGTTCAGAGATGGGAT...CTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp TTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACTCACTCCCACCCCTACCTGCCGGCATCCTaGGAGATGGTCACCGACACA +
Preference number: 4 (lower is better)
Translates to: FYTRLSGWRREIPTHSHPYLPAS*EMVTDT
Trigger: TGTGTCGGTGACCATCTCGCAGGATGCCGGCAGGTA...GGGGTGGGAGTGAGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: AVVSQLMDSPDQDSPWASSSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...AGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GTGATGGTGGGGAGAAGTGGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCGGCATCCTGCGAGATaGTCACCGACACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: VMVGRSGQIHESQEQNQRRHPAR*SPTHPG
Trigger: GCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCG...CCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCCACTTCTCCCCACCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp ATGGTCACCGACACATCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCCGGCATCCTGCGAGATaGTCACCGACACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: MVTDTSRPNVVTRLHTASRHPAR*SPTHPG
Trigger: GCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCG...GGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTCGGTGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACGTACGGCTTCCCCAGTaGGGGCACGTGGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHVRLPQ*GHVDEG
Trigger: GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGGGCACGTGGACGAAGGCTGATCGACCGTGACTCTGGTACAAAGAGGTGTAGTAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: GARGRRLIDRDSGTKRCSSALPS*SALYGF
Trigger: GAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACT...ACTACACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTTCGTCCACGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596962.5
CDS-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GGQIRISLPDRIPKLKSLLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...CAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGAAAGTGGCATCACCCTaGTGGGCGAGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQKVASP*WASGGG
Trigger: CCCACCCCCACTCGCCCACCAGGGTGATGCCACTTT...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR CCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCGGCAGGAGGCAAAAGTaGCATCACCCTGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGGRRQK*HHPGGR
Trigger: TCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCC...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR CCA 90 bp AGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATGAACTGCAATCCAACTaGCGTTCACGGTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SWSALYGFPSGGTWTKADELQSN*RSRCVP
Trigger: GGGAACACACCGTGAACGCCAGTTGGATTGCAGTTC...ATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTCCAGACGTGGGCACTaGGCAGCGCCTGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSSRRGH*AAPAPQ
Trigger: TTGAGGGGCAGGCGCTGCCCAGTGCCCACGTCTGGA...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGACTTCTGTGGGTAACTaGGGGAGGCACAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLTSVGN*GRHSGE
Trigger: CTCCCCGCTGTGCCTCCCCCAGTTACCCACAGAAGT...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGATATCCTTCTCCGCCTaGGGGGCCCGGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQISFSA*GARDTG
Trigger: TCCTGTGTCCCGGGCCCCCCAGGCGGAGAAGGATAT...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSCGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGACTCATAGCTTGGTGTTaGAAGGACCACGACCCCCAT +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRLIAWC*KDHDPH
Trigger: ATGGGGGTCGTGGTCCTTTCAACACCAAGCTATGAG...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAGTGAGATCCCATCTCTaGACTGCAATCCAACTGGCG +
Preference number: 4 (lower is better)
Translates to: GLPGHGSCVPRCREENGRVRSHL*TAIQLA
Trigger: CGCCAGTTGGATTGCAGTTCAGAGATGGGATCTCAC...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp AGCGGCAGTTGTCCAGCCCCTTGTAGCCCTTGTTGTGTCCACATTTCTCCAGTGCGGACCTGCTTCTGTTaGGACTGGCGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGSCPAPCSPCCVHISPVRTCFC*DWRDSC
Trigger: GCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCG...CACTGGAGAAATGTGGACACAACAAGGGCTACAAGGGGCTGGACAACTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHAVPRT*FCCDWR
Trigger: GCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGC...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSTSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAAATACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQIHESQEQNQRHLLRTNTSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...ATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGACAGCTGCTGCCGCTaGAGCCTCTCGGCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFADSCCR*SLSAAR
Trigger: TCGCGCGGCCGAGAGGCTGCAGCGGCAGCAGCTGTC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604499.6
CDS-3UTR GCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCTGGCCACGGACCCCATaGCTTAAGCAAGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSWPRTP*LKQGGL
Trigger: GAGGCCCCCTTGCTTAAGGCATGGGGTCCGTGGCCA...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCGGCCGGCCTCCTCACTaGAAAAACGGGGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGGRPPH*KNGDAF
Trigger: GAAAGCATCCCCGTTTTTGCAGTGAGGAGGCCGGCC...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCTGCTTCTGTTGCGACTaGCGCGACAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSCFCCD*RDSCCR
Trigger: GCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCA...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDSSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGAGTACGGCTTCCCCAGTaGGGGCACGTGGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGVRLPQ*GHVDEG
Trigger: GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSSALPS*SALYGF
Trigger: GAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACT...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEPGWPP*SRQLCP
Trigger: GGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGCTGGACCTCCCAGGCTaGCCTCCCTGGTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMLDLPG*PPWSRQ
Trigger: CTGCCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAG...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGTGGTATCGCAGCTCATaGATTCACCAGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: LPSWSALYGFPSGGTWTKWYRSS*IHQTKI
Trigger: AATCTTGGTCTGGTGAATCCATGAGCTGCGATACCA...CTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp ATCCATGTCGATGATGGAGTCAATGCTTTCAGGCCCGTCCTCCACGCAGCACTGAGCCATATCCCAGGGTaGCCCCAGAAAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IHVDDGVNAFRPVLHAALSHIPG*PQKGPG
Trigger: GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCT...CAGTGCTGCGTGGAGGACGGGCCTGAAAGCATTGACTCCATCATCGACATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600283.6
CDS-3UTR CCA 90 bp AAAGCAGACAAAATCCGCCTTTCCACAGGTGGCCCTGGTCTCCATGGCGACAGCGATGCTGAGGATGGGTaGCTGCATGGGGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: KADKIRLSTGGPGLHGDSDAEDG*LHGATW
Trigger: CCAGGTTGCCCCATGCAGCCACCCATCCTCAGCATC...GCTGTCGCCATGGAGACCAGGGCCACCTGTGGAAAGGCGGATTTTGTCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCCCAGGCCCAACGTGGTaGCTCGCTTGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIPGPTW*LACTQH
Trigger: ATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGG...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCCAGGCCCAACGTGGTaGCTCGCTTGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHPGPTW*LACTQH
Trigger: ATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGG...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TGGAGCCCGGGGCAGGTGCTTAGCTCAGTTCAGGCCTGGCACATCCCCTTCCCCTATGTGGAATCTCCTTaGGACAAAGTGTCACGACAC +
Preference number: 4 (lower is better)
Translates to: WSPGQVLSSVQAWHIPFPYVESP*DKVSRH
Trigger: GTGTCGTGACACTTTGTCTCAAGGAGATTCCACATA...GGGGAAGGGGATGTGCCAGGCCTGAACTGAGCTAAGCACCTGCCCCGGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAAGTGAGATCCCATCTCTaGACTGCAATCCAACTGGCG +
Preference number: 4 (lower is better)
Translates to: ASLVTAAVSPDAGRKMGEVRSHL*TAIQLA
Trigger: CGCCAGTTGGATTGCAGTTCAGAGATGGGATCTCAC...TTCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGQIRISLPDRIPKLKSLGGIGL*LGPASV
Trigger: AACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCC...CAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp CTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LSAWSKEAKVNTLGLFYTGGIGL*LGPASV
Trigger: AACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCC...GGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFATAFLG*SMAGSG
Trigger: GCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: APERARLLSTVQGRGRIEGISYT*RSTLSP
Trigger: TGGCGACAGCGTGGACCTGCATGTGTACGAGATTCC...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp CAGGAGGTCCAACATCTCCTCAATGATGGCTCTCAGTGCCCTGCCCAGCTGGTCGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: QEVQHLLNDGSQCPAQLVGISYT*RSTLSP
Trigger: TGGCGACAGCGTGGACCTGCATGTGTACGAGATTCC...GACCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGGACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp TTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATTGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: FLHQRTGKQVNIWPQPWYWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...ATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTAATGATGGCTCTCAGTaGCCTGCCCAGCTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLNDGSQ*PAQLVR
Trigger: GCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATT...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGACTGGCGCGACAGCTaGTGCCGCTGCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFADWRDS*CRCSLS
Trigger: CGAGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604499.6
CDS-3UTR GCA 90 bp GCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAAAGAGGTAGGAACCACTaGCAGCATCGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: ASLVTAAVSPDAGRKMGERGRNH*QHRNWR
Trigger: TCTCCAGTTCCGATGCTGGCAGTGGTTCCTACCTCT...TTCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RWADQNLSSRSDPQAEELSSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...AAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCTCTGTGCCTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: ALCLVYTECLVQRGQGQHSSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...GTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCCGGCATCCTGCGAGATaGTCACCGACACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSRHPAR*SPTHPG
Trigger: GCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCG...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACCCAGTGGGGGCACGTaGACGAAGGCTGATCGACCG +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEPSGGT*TKADRP
Trigger: CGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGTCAATGCTTTCACCAGGCTGGCCTCCCTaGTCACGGCAGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VVTRLHTASMSMMESMLSPGWPP*SRQLCP
Trigger: GGGACACAGCTGCCGTGACCAGGGAGGCCAGCCTGG...TGAAAGCATTGACTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGCAACAGTCTAGACAGTaGCAGCCAAAAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWQQSRQ*QPKGGQ
Trigger: CTGGCCCCCTTTTGGCTGCCACTGTCTAGACTGTTG...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ACGGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTGCCCAGGTGGGAGATGCTaGGGGCCTTGGTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: TAPATYKYLALCLVYTECPGGRC*GPWWGP
Trigger: CGGTCCCCACCAAGGCCCCCAGCATCTCCCACCTGG...GCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp GTGACAACTGTCCTGGAAACCAGGGGACAGAGTCTCTCAGCAGGTATGTTCAGCCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VTTVLETRGQSLSAGMFSPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...GCTGAACATACCTGCTGAGAGACTCTGTCCCCTGGTTTCCAGGACAGTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCAGGCTCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: CLVQRGQGQHAWLVLHQAPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...AGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp ACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACTGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: TECLVQRGQGQHAWLVLHCGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...GTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp TCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SPTDRKAGEHMAPAVVSQHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...CTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SRPNVVTRLHTASMSMMEHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAAGGCTGATCGACCGTaGCTCTGGTACAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: APERARLLSTVQGRGRIEKADRP*LWYKEV
Trigger: CACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTT...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR TCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCAAGGCTGATCGACCGTaGCTCTGGTACAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGKADRP*LWYKEV
Trigger: CACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTT...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
CDS-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCCCAACATCTCCTCAATaGTGGCTCTCAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPPTSPQ*WLSVPC
Trigger: GCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGG...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGCCAACATCTCCTCAATaGTGGCTCTCAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SRPNVVTRLHTASMSMMEPTSPQ*WLSVPC
Trigger: GCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGG...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GCCCCAGAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: APERARLLSTVQGRGRIEVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...CTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR TCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACAGGAAAGCAGGTaGACATATGGCCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: AVVSQLMDSPDQDSPWASGQESR*TYGPSR
Trigger: ACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCC...AGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGATAAAAATCAACTCCTaGCTCCTGGGCGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMIKINS*LLGECP
Trigger: TGGACACTCGCCCAGGAGTCAGGAGTTGATTTTTAT...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TGGAGCCCGGGGCAGGTGCTTAGCTCAGTTCAGGCCTGGCACATCCCCTTCCCCAGGAATAGAGCAAGATaGAACCTGAAGTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: WSPGQVLSSVQAWHIPFPRNRAR*NLKLLS
Trigger: GGAAAGCAACTTCAGGTTTCATCTTGCTCTATTCCT...GGGGAAGGGGATGTGCCAGGCCTGAACTGAGCTAAGCACCTGCCCCGGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGACGGCCACTACCCAGTaGCCAATTCCTGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWTATTQ*PIPVPF
Trigger: AAAAGGGACAGGAATTGGTCACTGGGTAGTGGCCGT...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp CTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTCCTTGGTGGGGACCGTaGTGGTGGGGAGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LVYTECLVQRGQGQHAWLPWWGP*WWGEVG
Trigger: GCCCACTTCTCCCCACCATCACGGTCCCCACCAAGG...AAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEGGIGL*LGPASV
Trigger: AACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCC...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp ACGCTTGGCTTGTTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACTGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TLGLFYTRLSGWRREIPTGISYT*RSTLSP
Trigger: TGGCGACAGCGTGGACCTGCATGTGTACGAGATTCC...AGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCCAAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp AGAACCAACGGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACGACTGGCGCGACAGCTaGTGCCGCTGCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: RTNGTCYVQILGSVPSIHDWRDS*CRCSLS
Trigger: CGAGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTC...GTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGTTGCCGAGAAACTACTaGCATCTGGGACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWLPRNY*HLGHFL
Trigger: AAGGAAATGTCCCAGATGGCAGTAGTTTCTCGGCAA...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFASSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMASSAAP*RDRAVP
Trigger: AGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGA...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp ATGGTCACCGACACATCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: MVTDTSRPNVVTRLHTASAGMSL*TVWYST
Trigger: GGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGC...GGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTCGGTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMASSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACGGCATCCTGCGAGATaGTCACCGACACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGRHPAR*SPTHPG
Trigger: GCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCG...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATCGGCATCCTGCGAGATaGTCACCGACACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDRHPAR*SPTHPG
Trigger: GCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCG...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCCCAGTGGGGGCACGTaGACGAAGGCTGATCGACCG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAPSGGT*TKADRP
Trigger: CGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGTACGGCTTCCCCAGTaGGGGCACGTGGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAVRLPQ*GHVDEG
Trigger: GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACAGAAAGATGGAAGTGTaGAGCCCGGGGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDRKMEV*SPGQVL
Trigger: AAGCACCTGCCCCGGGCTCCACACTTCCATCTTTCT...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTCTTGATTGGAGCAGGTaGGCTAGGTGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: AVVSQLMDSPDQDSPWASLDWSR*ARWPQA
Trigger: AGCTTGGGGCCACCTAGCCCACCTGCTCCAATCAAG...AGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCTGCATGGGGCAACCTaGCAAAGACCTGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSLHGAT*QRPASL
Trigger: CAAGGAGGCAGGTCTTTGCCAGGTTGCCCCATGCAG...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGGGGACCCCACCTCTGAATaGCTTGGGCCAGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLFPTFKRGHSFPSQKLGDPTSE*LGPDAG
Trigger: ACCAGCGTCTGGCCCAAGCCATTCAGAGGTGGGGTC...CCCCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 72 bp GCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTaGTTCTACACCAGGCTCAGTGGGTGGAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AWSKEAKVNTLG*FYTRLSGWRRE
Trigger: TTCCCTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCTGTGGTCGCCATGCCTaGCACCCCCACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFACGRHA*HPHMHH
Trigger: GTGGTGCATGTGGGGGTGTCAGGCATGGCGACCACA...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp GGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCAGGCTCAGTGCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GPKRPRSTRLACSTPGSVHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...CACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGTCAATGCTTTCAGGGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: GDSLAHSIHVDDGVNAFRGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...CCTGAAAGCATTGACTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TCCAGGAGGTCCAACATCTCCTCAATGATGGCTCTCAGTGCCCTGCCCAGCTGGATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SRRSNISSMMALSALPSWIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...CCAGCTGGGCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGGACCTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTAAAGGGCCAGGCTGTTaGGCACAGTTCAAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: AVVSQLMDSPDQDSPWASKGPGC*AQFKVE
Trigger: CTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTT...AGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR TCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTCCAGCACCAAAACCCTaGAGCTCCAGGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: AVVSQLMDSPDQDSPWASPAPKP*SSRPEV
Trigger: TACTTCTGGCCTGGAGCTTCAGGGTTTTGGTGCTGG...AGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGCCTCTGGGTGACCCCTaGGTCTTCAGTTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGQIRISLPDRIPKLKSLPLGDP*VFSCSP
Trigger: TGGGGAACAACTGAAGACTCAGGGGTCACCCAGAGG...CAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCCACAGACCAGACCTTTaGGGAATAGAGCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSHRPDL*GIEQDE
Trigger: TTCATCTTGCTCTATTCCTCAAAGGTCTGGTCTGTG...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCGGCAGGCAGATCACCTaGGGTCAGGATTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSGRQIT*GQDFKT
Trigger: GGTCTTGAAATCCTGACCTCAGGTGATCTGCCTGCC...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACTACAGTGGTGTaGTCATGGCTCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIWTTVV*SWLTGA
Trigger: AGCCCCAGTGAGCCATGATCACACCACTGTAGTCCA...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTCACGTGGACGAAGGCTaGTCGACCGTGACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAHVDEG*STVTLP
Trigger: CGGCAGAGTCACGGTCGATCAGCCTTCGTCCACGTG...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp GGCTTGTTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACTCACTCCGTGCCTAGTATACACTaGGTGCTTGGTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLFYTRLSGWRREIPTHSVPSIH*VLGPKR
Trigger: CCTCTTTGGACCAAGCACTCAGTGTATACTAGGCAC...GGAGTGAGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp CCAACGGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGCGGACCTGCTTCTGTTaGGACTGGCGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PTAPATYKYLALCLVYTERTCFC*DWRDSC
Trigger: GCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCG...CTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp CCAACGGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: PTAPATYKYLALCLVYTEAVPRT*FCCDWR
Trigger: GCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGC...CTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAAVPRT*FCCDWR
Trigger: GCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAGGIGL*LGPASV
Trigger: AACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFATSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTATCTGCCGGCATCCTaGGAGATGGTCACCGACACA +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSYLPAS*EMVTDT
Trigger: TGTGTCGGTGACCATCTCGCAGGATGCCGGCAGATA...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCTGGCTCTCAGTGCCCTaGCCAGCTGGTCCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAWLSVP*PAGPRC
Trigger: ACAACGCGGACCAGCTGGGCAGGGCACTGAGAGCCA...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGACGTCATCTCATCCCTaGCTGGTAAGTTCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMTSSHP*LVSSRL
Trigger: TAACCTTGAACTTACCAGGCAGGGATGAGATGACGT...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCTGCAAAAACGGGGATaGTTTCCCTCCCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDLQKRG*FPSQPA
Trigger: TGCTGGTTGGGAGGGAAAGCATCCCCGTTTTTGCAG...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ACGGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTGCTGCTTCTGTTGCGACTaGCGCGACAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TAPATYKYLALCLVYTECCFCCD*RDSCCR
Trigger: GCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCA...GCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTTGCTTCTGTTGCGACTaGCGCGACAGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMACFCCD*RDSCCR
Trigger: GCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCA...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp TTGGTGGGGACCGTGATGGTGGGGAGAAGTGGGCAGATCCATGAGTCCCAGGAGAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: LVGTVMVGRSGQIHESQESLWTV*YSTGIS
Trigger: CGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACT...CTCCTGGGACTCATGGATCTGCCCACTTCTCCCCACCATCACGGTCCCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGTCCTCCACGCAGCACTaGGAGCCGGGGCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQSSTQH*EPGQKR
Trigger: CCGCTTTTGCCCCGGCTCCCAGTGCTGCGTGGAGGA...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFASALPS*SALYGF
Trigger: GAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTAGTGCCCTGCCCAGCTaGTCCGCGTTGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMASALPS*SALYGF
Trigger: GAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACT...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp AAAGCAGACAAAATCCGCCTTTCCACAGGTGGCCCTGGTCTCCATGGCGACAGCGAACTGCAATCCAACTaGCGTTCACGGTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: KADKIRLSTGGPGLHGDSELQSN*RSRCVP
Trigger: GGGAACACACCGTGAACGCCAGTTGGATTGCAGTTC...GCTGTCGCCATGGAGACCAGGGCCACCTGTGGAAAGGCGGATTTTGTCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCAGCTCAGTTCAGGCCTaGCACATCCCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGISSVQA*HIPFPI
Trigger: AATGGGGAAGGGGATGTGCCAGGCCTGAACTGAGCT...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCACCTCCCCAGGGCACTaGAGTGCAGGTGTAAACATA +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPTSPGH*SAGVNI
Trigger: TATGTTTACACCTGCACTCCAGTGCCCTGGGGAGGT...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTAGCTTTCCAGACGTaGGCACTGGGCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSLAFQT*ALGSAC
Trigger: GCAGGCGCTGCCCAGTGCCCACGTCTGGAAAGCTAA...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp TTAAGTCCAATTTTCAGGGCAGGAGGCAAAAGTGGCATCACCCTGGTGGGCGAGAGTTTGGGGTGGGACTaGGTCCCTCAAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSPIFRAGGKSGITLVGESLGWD*VPQVLG
Trigger: TCCCAGGACTTGAGGGACCCAGTCCCACCCCAAACT...CTCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCCCTGAAAATTGGACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTGGAGGGGGAGCAGTTTaGGGTGGGACTGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFGGGAV*GGTGSL
Trigger: GAGGGACCCAGTCCCACCCCAAACTGCTCCCCCTCC...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGAGGCAGGCACTTCTGTaGGTAACTGGGGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: GGQIRISLPDRIPKLKSLRQALL*VTGGGT
Trigger: TGTGCCTCCCCCAGTTACCCACAGAAGTGCCTGCCT...CAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCGTGTTCTGTGAGCGCTaGAGAGGCAGGCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSVFCER*RGRHFC
Trigger: ACAGAAGTGCCTGCCTCTCCAGCGCTCACAGAACAC...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGGGCCAGACGCTGGTCTaGATCGTCAGGAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQGQTLV*IVRSHG
Trigger: GCCGTGGCTCCTGACGATCCAGACCAGCGTCTGGCC...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp TTCAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGGCTTGGGCCAGACGCTaGTCTGGATCGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSCSPHSKEATASLHRSWAWARR*SGSSGA
Trigger: GGCTCCTGACGATCCAGACCAGCGTCTGGCCCAAGC...CCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp TTCTACACCAGGCTCAGTGGGTGGAGGAGGGAAATCCCCACTCACTCCCACCCCTATACACTGAGTGCTTaGTCCAAAGAGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FYTRLSGWRREIPTHSHPYTLSA*SKEAKV
Trigger: GACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATA...GGGGTGGGAGTGAGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGTGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
3UTR CAA 72 bp CTCAGGATAGAGGCTGGGGCTGCGGAGAATAGGGCTTaGTCCAGCTGTCTCCAAAAGGGACGTCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LRIEAGAAENRA*SSCLQKGRLGS
Trigger: TGAACCTAGACGTCCCTTTTGGAGACAGCTGGACAAAGCCCTATTCTCCGCAGCCCCAGCCTCTATCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 72 bp GTCACCGACACATCCAGGCCCAACGTGGTGACTCGCTaGCACACAGCATCCATGTCGATGATGGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: VTDTSRPNVVTR*HTASMSMMESM
Trigger: CATTGACTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTCGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAPTGRG*VSGLFG
Trigger: ACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp ACGGCACCTGCTACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTGCCCAGGCCCAACGTGGTaGCTCGCTTGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: TAPATYKYLALCLVYTECPGPTW*LACTQH
Trigger: ATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGG...GCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCCAGGCCCAACGTGGTaGCTCGCTTGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAPGPTW*LACTQH
Trigger: ATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACACGTGGACGAAGGCTaGTCGACCGTGACTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEHVDEG*STVTLV
Trigger: TACCAGAGTCACGGTCGATCAGCCTTCGTCCACGTG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
CDS-3UTR TCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATCCAACATCTCCTCAATaGTGGCTCTCAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDPTSPQ*WLSVPC
Trigger: GCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGG...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp CACATCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HIQAQRGDSLAHSIHVDDVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...ATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp GGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGTCAATGCTTTCAGGGGACAGGAAAGCAGGTaGACATATGGCCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GDSLAHSIHVDDGVNAFRGQESR*TYGPSR
Trigger: ACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCC...CCTGAAAGCATTGACTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TTCAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGACTCCTGATCTCAGGTaGTCCGCCCACCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FSCSPHSKEATASLHRSWTPDLR*SAHPGL
Trigger: AAGGCCAGGGTGGGCGGATCACCTGAGATCAGGAGT...CCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGAGCAAGATGAAACCTaGAGTTGCTTTCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLEQDET*SCFPPD
Trigger: GTCTGGTGGAAAGCAACTTCAGGTTTCATCTTGCTC...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCGGGACTACAGGTGCTTaGCACCACAACTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPGTTGA*HHNWLI
Trigger: AATTAGCCAGTTGTGGTGTCAAGCACCTGTAGTCCC...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCGGACCTGCTTCTGTTaGGACTGGCGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQRTCFC*DWRDSC
Trigger: GCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCG...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCAATGATGGCTCTCAGTaGCCTGCCCAGCTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFANDGSQ*PAQLVR
Trigger: GCGGACCAGCTGGGCAGGGCACTGAGAGCCATCATT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 4 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAGACTGGCGCGACAGCTaGTGCCGCTGCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVDWRDS*CRCSLS
Trigger: CGAGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTC...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCACCCAGGCTGGAGTaGAGCTGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDSPRLE*SCAISA
Trigger: AGCTGAGATTGCACAGCTGCACTCCAGCCTGGGTGA...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGATGAGCCAAATGTTGTaGATTATGAGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMMSQML*IMRKDG
Trigger: CCCATCCTTCCTCATAATGCACAACATTTGGCTCAT...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TTGGTGGGGACCGTGATGGTGGGGAGAAGTGGGCAGATCCATGAGTCCCAGGAGCTAGTATACACTGAGTaGTTGGTCCAAAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LVGTVMVGRSGQIHESQELVYTE*LVQRGQ
Trigger: TTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAG...CTCCTGGGACTCATGGATCTGCCCACTTCTCCCCACCATCACGGTCCCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTCGGCATCCTGCGAGATaGTCACCGACACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMARHPAR*SPTHPG
Trigger: GCCTGGATGTGTCGGTGACCATCTCGCAGGATGCCG...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCGTACGGCTTCCCCAGTaGGGGCACGTGGACGAAGGC +
Preference number: 4 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFVRLPQ*GHVDEG
Trigger: GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTAC...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAAATGAACTGCAATCCAACTaGCGTTCACGGTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GQIHESQEQNQRHLLRTNELQSN*RSRCVP
Trigger: GGGAACACACCGTGAACGCCAGTTGGATTGCAGTTC...ATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCATGAGCCACTGCGCCTaGCCAAGACATGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIMSHCA*PRHGIL
Trigger: TAAGATGCCATGTCTTGGCCAGGCGCAGTGGCTCAT...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGAAGCCTCCCGAGTAGCTaGGACTACAGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGSLPSS*DYRHSS
Trigger: TGATGAGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTGAACTTACATCATCTGAGGAAGTTTACGTCATCTCATCCCTGCCTGGTAAGTCCCCATGGCCACATCTaGGGCAGCAGTCCCACCCCG +
Preference number: 4 (lower is better)
Translates to: LNLHHLRKFTSSHPCLVSPHGHI*GSSPTP
Trigger: CGGGGTGGGACTGCTGCCCCAGATGTGGCCATGGGG...ACTTACCAGGCAGGGATGAGATGACGTAAACTTCCTCAGATGATGTAAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AAAGCAGACAAAATCCGCCTTTCCACAGGTGGCCCTGGTCTCCATGGCGACAGCCTACATAAAACCCTTTaGCCGCCCGGAATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KADKIRLSTGGPGLHGDSLHKTL*PPGIPP
Trigger: AGGAGGAATTCCGGGCGGCCAAAGGGTTTTATGTAG...GCTGTCGCCATGGAGACCAGGGCCACCTGTGGAAAGGCGGATTTTGTCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTCAACTCCTGACTCCTaGGCGAGTGTCCAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: MAPAVVSQLMDSPDQDSPSTPDS*ASVQKQ
Trigger: TTGCTTTTGGACACTCGCCCAGGAGTCAGGAGTTGA...GGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTTCCCTTCACAGAAGCTaGGGGGACAGATGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AVVSQLMDSPDQDSPWASSLHRS*GDRCSD
Trigger: ATCACTGCATCTGTCCCCCCAGCTTCTGTGAAGGGA...AGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCTGGTCTTGAACTCCTaGCTCAAGGGATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLLVLNS*LKGFSC
Trigger: GCAGGAGAATCCCTTGAGCCAGGAGTTCAAGACCAG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGGTTCCAGCCCTTGATTaGAGCAGGTGGGCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMVPALD*SRWARW
Trigger: CCACCTAGCCCACCTGCTCCAATCAAGGGCTGGAAC...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACCCTGCCTCTCCAAGTaGCCTCAGGTTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEPCLSK*PQVCSS
Trigger: GCTGGAACAAACCTGAGGCCACTTGGAGAGGCAGGG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCCTGTGGTGTCAAATTTaGGGTCTCCTAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGILWCQI*GLLEPS
Trigger: GCTGGGCTCTAGGAGACCCCAAATTTGACACCACAG...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACACCAGGCTCAGTGGGTaGAGGAGGGAAATCCCCACT +
Preference number: 4 (lower is better)
Translates to: TECLVQRGQGQHAWLVLHTRLSG*RREIPT
Trigger: AGTGGGGATTTCCCTCCTCCACCCACTGAGCCTGGT...GTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCACGTGGACGAAGGCTaGTCGACCGTGACTCTGGTA +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAHVDEG*STVTLV
Trigger: TACCAGAGTCACGGTCGATCAGCCTTCGTCCACGTG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000597431.2
CDS-3UTR TCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGGACAGGAAAGCAGGTaGACATATGGCCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAGQESR*TYGPSR
Trigger: ACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFAVPRT*FCCDWR
Trigger: GCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGC...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAGGACATGCAGAGCTCTaGCAACTCCAGCCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVGHAEL*QLQPPR
Trigger: GCGCGGGGGCTGGAGTTGGCAGAGCTCTGCATGTCC...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCCGAGATCACGCCATTaGACTCTAGCCCGAGTAACA +
Preference number: 4 (lower is better)
Translates to: FLHQRTGKQVNIWPQPWYPRSRH*TLARVT
Trigger: TGTTACTCGGGCTAGAGTGCAATGGCGTGATCTCGG...ATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACAGGATTCCCCTCCTTaGCGAGAAACTACTGCCATC +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGQDSPP*RETTAI
Trigger: GATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTG...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCCTCAACAGCCATTCTaGCAAGGGTCTAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLPQQPF*QGSKWN
Trigger: GTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGATATCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFADICGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGATATC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597431.2
CDS-3UTR CCA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQSLWTV*YSTGIS
Trigger: CGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACT...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TTAAGTCCAATTTTCAGGGCAGGAGGCAAAAGTGGCATCACCCTGGTGGGCGAGGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: LSPIFRAGGKSGITLVGEAGMSL*TVWYST
Trigger: GGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGC...CTCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCCCTGAAAATTGGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGTGGTATCGCAGCTCATaGATTCACCAGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLWYRSS*IHQTKI
Trigger: AATCTTGGTCTGGTGAATCCATGAGCTGCGATACCA...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 4 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp TTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 4 (lower is better)
Translates to: FLHQRTGKQVNIWPQPWYIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...ATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGATGGGCAGCAAGATGTaGCTGAACTTACATCATCTG +
Preference number: 4 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLMGSKM*LNLHHL
Trigger: CAGATGATGTAAGTTCAGCCACATCTTGCTGCCCAT...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCCAATTACTTTCACTGTaGGGGTCGTCCTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIQLLSL*GSSSLP
Trigger: AGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTG...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTAAGACAAAAGAAAGATaGAAGTGTGGAGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLKTKER*KCGARG
Trigger: GCCCCGGGCTCCACACTTCCATCTTTCTTTTGTCTT...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCATTATGAGGAAGGATaGGATACTGGCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: AGEHMAPAVVSQLMDSPDHYEEG*DTGLTG
Trigger: CCCAGTCAAGCCAGTATCCCATCCTTCCTCATAATG...GTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TTCAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: FSCSPHSKEATASLHRSWHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...CCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTCACATTTCTCCAGTGTaGCTGTGGTCGCCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAHISPV*LWSPCL
Trigger: CAGGCATGGCGACCACAGTCACACTGGAGAAATGTG...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp ATCCATGTCGATGATGGAGTCAATGCTTTCAGGCCCGTCCTCCACGCAGCACTGCAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: IHVDDGVNAFRPVLHAALQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...CAGTGCTGCGTGGAGGACGGGCCTGAAAGCATTGACTCCATCATCGACATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAAAGGCTGATCGACCGTaGCTCTGGTACAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEKADRP*LWYKEV
Trigger: CACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTT...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
CDS-3UTR TCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCACGTGGACGAAGGCTaGTCGACCGTGACTCTGGTA +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQHVDEG*STVTLV
Trigger: TACCAGAGTCACGGTCGATCAGCCTTCGTCCACGTG...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCCAACATCTCCTCAATaGTGGCTCTCAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAPTSPQ*WLSVPC
Trigger: GCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTCCAACATCTCCTCAATaGTGGCTCTCAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAPTSPQ*WLSVPC
Trigger: GCAGGGCACTGAGAGCCATCATTGAGGAGATGTTGG...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp GGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGTCAATGCTTTCAGGGTTGATTTTGCCCTCTaGCTGCTCCAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GDSLAHSIHVDDGVNAFRVDFAL*LLQEVQ
Trigger: TTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAAC...CCTGAAAGCATTGACTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp AAAGCAGACAAAATCCGCCTTTCCACAGGTGGCCCTGGTCTCCATGGCGACAGCGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: KADKIRLSTGGPGLHGDSVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...GCTGTCGCCATGGAGACCAGGGCCACCTGTGGAAAGGCGGATTTTGTCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TCCAGGCCCAACGTGGTGACTCGCTTGCACACAGCATCCATGTCGATGATGGAGGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SRPNVVTRLHTASMSMMEVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...CTCCATCATCGACATGGATGCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TTAAGTCCAATTTTCAGGGCAGGAGGCAAAAGTGGCATCACCCTGGTGGGCGAGATCGGATCCCCAAGCTaGAGAGCTTGTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPIFRAGGKSGITLVGEIGSPS*RACLFL
Trigger: CAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGAT...CTCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCCCTGAAAATTGGACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR TCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACTGATCTTGAACTCCTaGTCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAELILNS*SQVIRP
Trigger: TGGGCGGATCACCTGAGATCAGGAGTTCAAGATCAG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGGGGGGACAGATGCAGTaGTGTCTCCCACACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQGGQMQ*CLPHSG
Trigger: TCCAGAGTGTGGGAGACATCACTGCATCTGTCCCCC...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAGISYT*RSTLSP
Trigger: TGGCGACAGCGTGGACCTGCATGTGTACGAGATTCC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 4 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR GCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATGACAGCTGCTGCCGCTaGAGCCTCTCGGCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYDSCCR*SLSAAR
Trigger: TCGCGCGGCCGAGAGGCTGCAGCGGCAGCAGCTGTC...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTCCTCTTCCCAACACCTaGCAAGTCCCACCCACCTTG +
Preference number: 4 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFPLPNT*QVPPTL
Trigger: CAAGGTGGGTGGGACTTGGCAGGTGTTGGGAAGAGG...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCATCCCATCTCTGAACTaGAATCCAACTGGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIIPSLN*NPTGVH
Trigger: GTGAACGCCAGTTGGATTGCAGTTCAGAGATGGGAT...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHSLWTV*YSTGIS
Trigger: CGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACT...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSAGMSL*TVWYST
Trigger: GGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGC...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGGACCAAGATTCTCCCTaGGCATCTGGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQDQDSP*ASGPPR
Trigger: CCTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTC...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 4 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTATATGGCCCCAGCCGTaGTATCGCAGCTCATGGATT +
Preference number: 4 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSIWPQP*YRSSWI
Trigger: AATCCATGAGCTGCGATACCACGGCTGGGGCCATAT...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTGGCCCTGGTCTCCATaGCGACAGCTCATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFWPWSP*RQLIAW
Trigger: CCAAGCTATGAGCTGTCGCCATGGAGACCAGGGCCA...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCACCAGACCTCTaGGTGACCCCTGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSFPPDL*VTPESS
Trigger: TGAAGACTCAGGGGTCACCCAGAGGTCTGGTGGAAA...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGATTCAAATCCCTATGTaGAATCTCCTTGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMIQIPM*NLLETK
Trigger: CTTTGTCTCAAGGAGATTCCACATAGGGATTTGAAT...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCCAAGGTCAACACGCTTaGCTTGTTCTACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSAWSKEAKVNTLGLFYTQGQHA*LVLHQA
Trigger: AGCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTG...GGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACCAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCAAGGCTGATCGACCGTaGCTCTGGTACAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAKADRP*LWYKEV
Trigger: CACCTCTTTGTACCAGAGTCACGGTCGATCAGCCTT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000597431.2
CDS-3UTR TCA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR TCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCGGACAGGAAAGCAGGTaGACATATGGCCCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFGQESR*TYGPSR
Trigger: ACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCC...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCAAGGTTACCAGGAAGTaGGATAAAAATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGKVTRK*DKNQLL
Trigger: CAGGAGTTGATTTTTATCTCACTTCCTGGTAACCTT...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAAAAGCCAGTCTTCCTCCCAGGCATAGGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VQGRGRIERLLNLVKASLPPRHR*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACCTATGCCTGGGAGG...AAGACTGGCTTTTACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TTCAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGCTGGGATCACAGACATaGACCATCTCCAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: FSCSPHSKEATASLHRSWLGSQT*TISRIP
Trigger: GGGAATCCTGGAGATGGTTCATGTCTGTGATCCCAG...CCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHSLWTV*YSTGIS
Trigger: CGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACT...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGAAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGSLWTV*YSTGIS
Trigger: CGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACT...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp CTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: LVYTECLVQRGQGQHAWLAGMSL*TVWYST
Trigger: GGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGC...AAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAAGMSL*TVWYST
Trigger: GGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTGGTATCGCAGCTCATaGATTCACCAGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLWYRSS*IHQTKI
Trigger: AATCTTGGTCTGGTGAATCCATGAGCTGCGATACCA...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGAACTGCAATCCAACTaGCGTTCACGGTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAELQSN*RSRCVP
Trigger: GGGAACACACCGTGAACGCCAGTTGGATTGCAGTTC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGAACTGCAATCCAACTaGCGTTCACGGTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAELQSN*RSRCVP
Trigger: GGGAACACACCGTGAACGCCAGTTGGATTGCAGTTC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp GTGACAACTGTCCTGGAAACCAGGGGACAGAGTCTCTCAGCAGGTATGTTCAGCGGAAGGATGGGATACTaGCTTGACTGGGTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VTTVLETRGQSLSAGMFSGRMGY*LDWVRK
Trigger: TTTCCTTACCCAGTCAAGCCAGTATCCCATCCTTCC...GCTGAACATACCTGCTGAGAGACTCTGTCCCCTGGTTTCCAGGACAGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAGGATGGGTGGCTGCATaGGGCAACCTGGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVGWVAA*GNLAKT
Trigger: GGTCTTTGCCAGGTTGCCCCATGCAGCCACCCATCC...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
3UTR CAA 72 bp GGAGCAGAACCAACGGCACCTGCTACGTACAAATACTaGGCTCTGTGCCTAGTATACACTGAGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GAEPTAPATYKY*ALCLVYTECLV
Trigger: GACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGTAGCAGGTGCCGTTGGTTCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR TCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACAGGTCGAGGACGCATTaGGAGGCTTTTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHRSRTH*EAFKFG
Trigger: ACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCT...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR TCA 90 bp TTAAGTCCAATTTTCAGGGCAGGAGGCAAAAGTGGCATCACCCTGGTGGGCGAGAGGTCGAGGACGCATTaGGAGGCTTTTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: LSPIFRAGGKSGITLVGERSRTH*EAFKFG
Trigger: ACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCT...CTCGCCCACCAGGGTGATGCCACTTTTGCCTCCTGCCCTGAAAATTGGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR TCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCCTCAAGTTAGGATGCTaGGGATGGGTGGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFLKLGC*GWVAAW
Trigger: CCATGCAGCCACCCATCCTCAGCATCCTAACTTGAG...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTATTTTGCCCTCTGACTaGTCCAGGAGGTCCAACATC +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAILPSD*SRRSNI
Trigger: GATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAAT...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR GCA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTACTGAGGATGGGTGGCTaGATGGGGCAACCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVLRMGG*MGQPGK
Trigger: TTTGCCAGGTTGCCCCATGCAGCCACCCATCCTCAG...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATCCCAGTGGGGGCACGTaGACGAAGGCTGATCGACCG +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYPSGGT*TKADRP
Trigger: CGGTCGATCAGCCTTCGTCCACGTGCCCCCACTGGG...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCGAAACTACTGCCATCTaGGACATTTCCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSETTAI*DISFTH
Trigger: ATGTGTGAAGGAAATGTCCCAGATGGCAGTAGTTTC...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCTCGCAGAGATATCTGTaGACTGTGCTTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFASQRYL*TVLLPQ
Trigger: CTGTGGGAGAAGCACAGTCCACAGATATCTCTGCGA...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597431.2
3UTR CAA 72 bp GATCACAGACATGAACCATCTCCAGGATTCCCCTCCTaGCCGAGAAACTACTGCCATCTGGGACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: DHRHEPSPGFPS*PRNYCHLGHFL
Trigger: AAGGAAATGTCCCAGATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTGGAGATGGTTCATGTCTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAAAAGGGCCAGGCTGTTaGGCACAGTTCAAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVKGPGC*AQFKVE
Trigger: CTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTT...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR TCA 90 bp GAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATAAATGTTGTGCATTATaGGGAAGGATGGGATACTGG +
Preference number: 4 (lower is better)
Translates to: EHMAPAVVSQLMDSPDQDKCCAL*GRMGYW
Trigger: CCAGTATCCCATCCTTCCTCATAATGCACAACATTT...ATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACAGAGAGTGCACAGATaGGTTCCACCAAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGQRVHR*VPPKEK
Trigger: TTTTTCTTTTGGTGGAACTCATCTGTGCACTCTCTG...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp TTCAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGCTGTCTTTTCACCATTaGCACTTGCCACCCCTATTC +
Preference number: 4 (lower is better)
Translates to: FSCSPHSKEATASLHRSWLSFHH*HLPPLF
Trigger: GAATAGGGGTGGCAAGTGTCAATGGTGAAAAGACAG...CCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATCGGACCTGCTTCTGTTaGGACTGGCGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYRTCFC*DWRDSC
Trigger: GCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCG...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RKKARKKERKKERKPASQGGIGL*LGPASV
Trigger: AACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCC...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGACCAGCTGTGGACTGTaGTTCTCCCACAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RKKARKKERKKERKPASQTSCGL*FSHRAG
Trigger: CCCCGCCCTGTGGGAGAAGCACAGTCCACAGCTGGT...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCAGCTATGTCACACAGTaGTTTAAACACAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGISYVTQ*FKHRGE
Trigger: TTCACCTCTGTGTTTAAAGCACTGTGTGACATAGCT...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CTGAACTTACATCATCTGAGGAAGTTTACGTCATCTCATCCCTGCCTGGTAAGTCCCAGGGCACTGGAGTaGAGGTGTAAACATACCAGC +
Preference number: 4 (lower is better)
Translates to: LNLHHLRKFTSSHPCLVSPRALE*RCKHTS
Trigger: GCTGGTATGTTTACACCTGCACTCCAGTGCCCTGGG...ACTTACCAGGCAGGGATGAGATGACGTAAACTTCCTCAGATGATGTAAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCG +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFASLWTV*YSTGIS
Trigger: CGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CCA 90 bp AGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTTGGTATCGCAGCTCATaGATTCACCAGACCAAGATT +
Preference number: 4 (lower is better)
Translates to: RWADQNLSSRSDPQAEELWYRSS*IHQTKI
Trigger: AATCTTGGTCTGGTGAATCCATGAGCTGCGATACCA...AAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAACGCCTGGCCAAGACATaGCATCTTAAGTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAERLAKT*HLKSNF
Trigger: AAAATTGGACTTAAGATGCCATGTCTTGGCCAGGCG...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252813.5
ENST00000269919.11
CDS-3UTR CCA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGCGCCTGGCCAAGACATaGCATCTTAAGTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMRLAKT*HLKSNF
Trigger: AAAATTGGACTTAAGATGCCATGTCTTGGCCAGGCG...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGCCATCTGCCCCAGAGTaGATACTTTCTGTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMPSAPE*ILSVLD
Trigger: ATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGG...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGTTTGTGGCAATAGTTaGTTTTGCCCTCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: LILPSDCSRRSNISSMMAVCGNS*FCPLTA
Trigger: AGCAGTCAGAGGGCAAAATCAACTATTGCCACAAAC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR TCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATGGGTCCCCAGCAGGATaGGGTCTTAGGAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYGSPAG*GLRRPE
Trigger: CTCAGGTCTCCTAAGACCTCATCCTGCTGGGGACCC...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAAAGGAAGGTGAACGCTaGAGAAAACAAAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEKEGER*RKQNSQ
Trigger: CTGAGAGTTTTGTTTTCTTCAGCGTTCACCTTCCTT...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp GCTCTGTGCCTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACAAATACTTGGCTCTGTaGCTAGTATACACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: ALCLVYTECLVQRGQGQHKYLAL*LVYTEC
Trigger: GCACTCAGTGTATACTAGGCACAGAGCCAAGTATTT...GTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CCA 90 bp AGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTATTTTGTCCCTGTCTTaGCTAGACCTGTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWADQNLSSRSDPQAEELILSLS*LDLFSP
Trigger: AGGAGAAAACAGGTCTAGCCAAGACAGGGACAAAAT...AAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp ATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCATGCACCACCACATCTaGCTAATTCTTGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: IAAHGFTRPRFSLGIWTSMHHHI*LILVCF
Trigger: AAAACATACAAGAATTAGCCAGATGTGGTGGTGCAT...GGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ATTCTGAAATTCCTTCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGAGGTCGAGGACGCATTaGGAGGCTTTTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: ILKFLHQRTGKQVNIWPQRSRTH*EAFKFG
Trigger: ACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCT...CTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGAAGGAATTTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATGAGCTTGTCTTTTCCTaGCCACACCCCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYELVFS*PHPRGW
Trigger: CCACCCTCTGGGGTGTGGCCAGGAAAAGACAAGCTC...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCAAAAACCTAGATGTTaGGAAACCAACAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: ERARLLSTVQGRGRIERLQKPRC*ETNKIR
Trigger: TCTAATCTTGTTGGTTTCCCAACATCTAGGTTTTTG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp TTTTCCAGCTCTCCCATCTGCCCCAGAGTGGATACTTTCTGTTCTAGATGTTTCAGATGCCACAGGCCTTaGCAAGCAGAAAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: FSSSPICPRVDTFCSRCFRCHRP*QAESLI
Trigger: AATTAGGCTTTCTGCTTGCCAAGGCCTGTGGCATCT...GAAACATCTAGAACAGAAAGTATCCACTCTGGGGCAGATGGGAGAGCTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp ACGTACAAATACTTGGCTCTGTGCCTAGTATACACTGAGTGCTTGGTCCAAAGACAGCATCCATGTCGATaGTGGAGTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TYKYLALCLVYTECLVQRQHPCR*WSQCFQ
Trigger: CTGAAAGCATTGACTCCATCATCGACATGGATGCTG...TCTTTGGACCAAGCACTCAGTGTATACTAGGCACAGAGCCAAGTATTTGTACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR GCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: RKKARKKERKKERKPASQGISYT*RSTLSP
Trigger: TGGCGACAGCGTGGACCTGCATGTGTACGAGATTCC...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR GCA 90 bp CTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTTCCTGGCCACACCTGATTTCCAGAACGTaGATTTCACTCAATTACTTT +
Preference number: 4 (lower is better)
Translates to: LSSRSDPQAEELVFSWPHLISRT*ISLNYF
Trigger: AAAGTAATTGAGTGAAATGCACGTTCTGGAAATCAG...GTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CCA 90 bp CTGAACTTACATCATCTGAGGAAGTTTACGTCATCTCATCCCTGCCTGGTAAGTATGTCTCCCACACTCTaGATTTCTCAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: LNLHHLRKFTSSHPCLVSMSPTL*ISQDTE
Trigger: CTCTGTGTCCTGAGAAATCCAGAGTGTGGGAGACAT...ACTTACCAGGCAGGGATGAGATGACGTAAACTTCCTCAGATGATGTAAGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGGCCTGGCCAACATGGTaGAGCTGCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RKKARKKERKKERKPASQAWPTW*SCISTK
Trigger: TTTAGTAGAGATGCAGCTTCACCATGTTGGCCAGGC...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATAACCTGGCAAAGACCTaGCTCCTTGACCATGATCAG +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYNLAKT*LLDHDQ
Trigger: CTGATCATGGTCAAGGAGGCAGGTCTTTGCCAGGTT...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR TCA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGGACAAGATAAAAACCTaGGATGTTAGAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RKKARKKERKKERKPASQDKIKT*DVRGAP
Trigger: GGGGGCTCCTCTAACATCTCAGGTTTTTATCTTGTC...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR GCA 90 bp CACCACATCTGGCTAATTCTTGTATGTTTTGGTAGATATGGGATCTCTTGCTATCATACCAGCTGGTCTTaGTTCCTGGAAGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: HHIWLILVCFGRYGISCYHTSWS*FLEETS
Trigger: GGAAGTTTCTTCCAGGAAGCAAGACCAGCTGGTATG...ATAGCAAGAGATCCCATATCTACCAAAACATACAAGAATTAGCCAGATGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS GCA 90 bp GCTGCTCCATGGCGGGATCGGGCTGTGCCTCGGACCTGCTTCTGTTaGGACTGGCGCGACAGCTGCTGCCGCTGCAGCCTCTCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: AAPWRDRAVPRTCFC*DWRDSCCRCSLSAA
Trigger: CGCGGCCGAGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269919.11
ENST00000595066.5
ENST00000604499.6
CDS GCA 90 bp CCTTCCTCGGCTGCTCCATGGCGGGATCGGGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGCGACAGCTGCTGCCGCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PSSAAPWRDRAVPRT*FCCDWRDSCCRCSL
Trigger: GAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000604499.6
CDS GCA 90 bp CACTACCACCGCCTTCCTCGGCTGCTCCATGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTTGCGACTGGCGCGACAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HYHRLPRLLHGGIGL*LGPASVATGATAAA
Trigger: GGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGTGGTAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp TCTCAGTGCCCTGCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACTCGGACCTGCTTCTGTaGCGACTGGCGCGACAGCTG +
Preference number: 5 (lower is better)
Translates to: SQCPAQLVRVVRLPQWGHSDLLL*RLARQL
Trigger: CAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGA...GTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGCAGGGCACTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp AGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATCCCAGCTGGTCCGCGTaGTACGGCTTCCCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SWSALYGFPSGGTWTKADPSWSA*YGFPSG
Trigger: CCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGG...ATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCTGATCGACTCGGACCTGCTTCTGTaGCGACTGGCGCGACAGCTG +
Preference number: 5 (lower is better)
Translates to: GPRCTASPVGARGRRLIDSDLLL*RLARQL
Trigger: CAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGA...GTCGATCAGCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGACCCAGCTGGTCCGCGTaGTACGGCTTCCCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GLPGHGSCVPRCREENGRPSWSA*YGFPSG
Trigger: CCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGG...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS CCA 90 bp AAGGGCCAAATCCCGTCACTACCACCGCCTTCCTCGGCTGCTCCATaGCGGGATCGGGCTGTGCCTCGGACCTGCTTCTGTTGCGACTGG +
Preference number: 5 (lower is better)
Translates to: KGQIPSLPPPSSAAP*RDRAVPRTCFCCDW
Trigger: CCAGTCGCAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGTGGTAGTGACGGGATTTGGCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp GCCCAGCTGGTCCGCGTTGTACGGCTTCCCCAGTGGGGGCACGTGGACGAAGGCCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 5 (lower is better)
Translates to: AQLVRVVRLPQWGHVDEGPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...GCCTTCGTCCACGTGCCCCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000596962.5
ENST00000600283.6
CDS GCA 90 bp GGCCTAGCTTTTCTAGCTCCCGTCACTACCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGCTGTGCCTCGGACCTGCTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GLAFLAPVTTTAFLG*SMAGSGCASDLLLL
Trigger: CAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGTGGTAGTGACGGGAGCTAGAAAAGCTAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252813.5
CDS GCA 90 bp TCCCCAAAAGGGCCAAATCCCGTCACTACCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGCTGTGCCTCGGACCTGCTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SPKGPNPVTTTAFLG*SMAGSGCASDLLLL
Trigger: CAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGTGGTAGTGACGGGATTTGGCCCTTTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp GGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGAGCAGTCCCACCCCGTaGCCTGGCCACGGACCCCAT +
Preference number: 5 (lower is better)
Translates to: GPSRGIAAHGFTRPRFSLSSPTP*PGHGPH
Trigger: ATGGGGTCCGTGGCCAGGCAACGGGGTGGGACTGCT...CAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTGCCGAGATCACGCCATaGCACTCTAGCCCGAGTAAC +
Preference number: 5 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAAEITP*HSSPSN
Trigger: GTTACTCGGGCTAGAGTGCAATGGCGTGATCTCGGC...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp TCACCAACGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGGGGAGGGGGAGCAGTTaGGGGTGGGACTGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SPTDRKAGEHMAPAVVSQGRGSS*GWDWVP
Trigger: AGGGACCCAGTCCCACCCCAAACTGCTCCCCCTCCC...CTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCGTTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGATTCACCCCAGCTGGTCCGCGTaGTACGGCTTCCCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GKQVNIWPQPWYRSSWIHPSWSA*YGFPSG
Trigger: CCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGG...GTGAATCCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCCCAGCTGGTCCGCGTaGTACGGCTTCCCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: ERARLLSTVQGRGRIERLPSWSA*YGFPSG
Trigger: CCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp TCAGCACCCCATGCTGGCCGTCACGCAGCTCCCAGAGGCCTCAGGATAGAGGCTCAAAGACCTGCCTCCTaGACCATGATCAGCACCCCA +
Preference number: 5 (lower is better)
Translates to: SAPHAGRHAAPRGLRIEAQRPAS*TMISTP
Trigger: TGGGGTGCTGATCATGGTCAAGGAGGCAGGTCTTTG...AGCCTCTATCCTGAGGCCTCTGGGAGCTGCGTGACGGCCAGCATGGGGTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAGCCCTCATGAGGCACTaGTGCCCAGGGAAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: GLPGHGSCVPRCREENGRALMRH*CPGKGN
Trigger: ATTTCCCTTCCCTGGGCACAAGTGCCTCATGAGGGC...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AGGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: RLASLVTAAVSPDAGRKMNVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...CATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 5 (lower is better)
Translates to: KESQPASHIPGWPQKGPGPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp AGCTGTGCGGGACAGATTTCCATGAGCCATCCCCCTCCACCTGGTCACCTCCCCGCTGAGGCAGGAGAATaGTGTAAACCCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SCAGQISMSHPPPPGHLPAEAGE*CKPRRW
Trigger: CCACCTCCTGGGTTTACACAATTCTCCTGCCTCAGC...GGGGAGGTGACCAGGTGGAGGGGGATGGCTCATGGAAATCTGTCCCGCACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAGATGCCATCATCAAGTaGGTCAGGGTACCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: GLPGHGSCVPRCREENGRDAIIK*VRVPGA
Trigger: GGCACCTGGTACCCTGACCAACTTGATGATGGCATC...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GGCTGGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGCAGATGCCACAGGCCTaGGCAAGCAGAAAGCCTAAT +
Preference number: 5 (lower is better)
Translates to: GWPPWSRQLCPQMQGGKWQMPQA*ASRKPN
Trigger: ATTAGGCTTTCTGCTTGCCAAGGCCTGTGGCATCTG...CCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTCGGACCTGCTTCTGTaGCGACTGGCGCGACAGCTG +
Preference number: 5 (lower is better)
Translates to: ERARLLSTVQGRGRIERLSDLLL*RLARQL
Trigger: CAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGA...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp TTGGTGGGGACCGTGATGGTGGGGAGAAGTGGGCAGATCCATGAGTCCCAGGAGAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: LVGTVMVGRSGQIHESQENVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...CTCCTGGGACTCATGGATCTGCCCACTTCTCCCCACCATCACGGTCCCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp GCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAAGAAAGGGCCAGGCTGTaGAGCACAGTTCAAGGTCGA +
Preference number: 5 (lower is better)
Translates to: ASLVTAAVSPDAGRKMGEERARL*STVQGR
Trigger: TCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC...TTCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS TCA 90 bp CCTCCAGAAGGAACCAGTCCTGCTACCACCTTGACCTTGGACTTCTaGCTTCCAAGGCTGCCGGCATCCTGCGAGATGGTCACCGACACA +
Preference number: 5 (lower is better)
Translates to: PPEGTSPATTLTLDF*LPRLPASCEMVTDT
Trigger: TGTGTCGGTGACCATCTCGCAGGATGCCGGCAGCCTTGGAAGTCAGAAGTCCAAGGTCAAGGTGGTAGCAGGACTGGTTCCTTCTGGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595552.2
CDS CCA 90 bp GGACTGTGCTTCTCCCACAGGGCGGGGATGAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCGTACACATGCAGGTCCACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GLCFSHRAGMSLWTV*YSTGISYTCRSTLS
Trigger: CGACAGCGTGGACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAGCACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp CTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCTCGGACCTGCTTCTGTaGCGACTGGCGCGACAGCTG +
Preference number: 5 (lower is better)
Translates to: LSAWSKEAKVNTLGLFYTSDLLL*RLARQL
Trigger: CAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGA...GGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: KESQPASHIPGWPQKGPGESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGAGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: GLPGHGSCVPRCREENGRESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp CGGACAGGAAAGCAGGTGAACATATGGCCCCAGCCGTGGTATCGCAGCTCATGGAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: RTGKQVNIWPQPWYRSSWNVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...CCATGAGCTGCGATACCACGGCTGGGGCCATATGTTCACCTGCTTTCCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCCCAGCTGGTCCGCGTaGTACGGCTTCCCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAPSWSA*YGFPSG
Trigger: CCCACTGGGGAAGCCGTACAACGCGGACCAGCTGGG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp CAGTTGTTCCCCACATTCAAAAGAGGCCACAGCTTCCCTTCACAGAAGCTGGGGCCACCTCTGAATGGCTaGGGCCAGACGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QLFPTFKRGHSFPSQKLGPPLNG*GQTLVW
Trigger: CCAGACCAGCGTCTGGCCCAAGCCATTCAGAGGTGG...CCCCAGCTTCTGTGAAGGGAAGCTGTGGCCTCTTTTGAATGTGGGGAACAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTTCGGACCTGCTTCTGTaGCGACTGGCGCGACAGCTG +
Preference number: 5 (lower is better)
Translates to: RWADQNLSSRSDPQAEELSDLLL*RLARQL
Trigger: CAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGA...AAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GGCCTCCCTGGTCACGGCAGCTGTGTCCCCAGATGCAGGGAGGAAAATGGGAGACCTGTCTTTTCACCATaGACACTTGCCACCCCTATT +
Preference number: 5 (lower is better)
Translates to: GLPGHGSCVPRCREENGRPVFSP*TLATPI
Trigger: AATAGGGGTGGCAAGTGTCAATGGTGAAAAGACAGG...TCTCCCATTTTCCTCCCTGCATCTGGGGACACAGCTGCCGTGACCAGGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp TACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTAGAGATGCTGGGGGCCTaGGTGGGGACCGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: YTECLVQRGQGQHAWLVLEMLGA*VGTVMV
Trigger: CACCATCACGGTCCCCACCAAGGCCCCCAGCATCTC...TAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp AGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCCCAGGATTCCCCTCCTaGCCGAGAAACTACTGCCAT +
Preference number: 5 (lower is better)
Translates to: SRGIAAHGFTRPRFSLGIPGFPS*PRNYCH
Trigger: ATGGCAGTAGTTTCTCGGCAAGGAGGGGAATCCTGG...GATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GCAGCGCCTGCCCCTCAACAGCCATTCTGCCAAGGGTCTAAGTGGAACCCCAGCCTATGTGGAATCTCCTaGAGACAAAGTGTCACGACA +
Preference number: 5 (lower is better)
Translates to: AAPAPQQPFCQGSKWNPSLCGIS*RQSVTT
Trigger: TGTCGTGACACTTTGTCTCAAGGAGATTCCACATAG...GCTGGGGTTCCACTTAGACCCTTGGCAGAATGGCTGTTGAGGGGCAGGCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS CCA 90 bp GATATCTGTGGACTGTGCTTCTCCCACAGGGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACCGGAATCTCGTACACATGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: DICGLCFSHRAGMSL*TVWYSTGISYTCRS
Trigger: GGACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAGCACAGTCCACAGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597431.2
CDS-3UTR CAA 90 bp GTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGAGAAAGGGCCAGGCTGTaGAGCACAGTTCAAGGTCGA +
Preference number: 5 (lower is better)
Translates to: VVSQLMDSPDQDSPWASGERARL*STVQGR
Trigger: TCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC...TCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp GAAAGGGCCAGGCTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTCAAGTGGCCTCAGGTTaGTTCCAGCCCTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: ERARLLSTVQGRGRIERLQVASG*FQPLIG
Trigger: TCCAATCAAGGGCTGGAACAAACCTGAGGCCACTTG...AAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AGTGGGCAGATCCATGAGTCCCAGGAGCAGAACCAACGGCACCTGCTACGTACAGTATACACTGAGTGCTaGGTCCAAAGAGGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: SGQIHESQEQNQRHLLRTVYTEC*VQRGQG
Trigger: ACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATAC...TGTACGTAGCAGGTGCCGTTGGTTCTGCTCCTGGGACTCATGGATCTGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS TCA 90 bp GTCGCAGAGATATCTGTGGACTGTGCTTCTCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGTACTCAACCGGAATCTCGTACACAT +
Preference number: 5 (lower is better)
Translates to: VAEISVDCASPTGRG*VSGLFGTQPESRTH
Trigger: ATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAGCACAGTCCACAGATATCTCTGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597431.2
CDS GCA 90 bp ATGAGTCTCTGGACTGTTTGGTACTCAACCGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCAAGGCCTAGCTTTTCTAGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: MSLWTVWYSTGISYT*RSTLSPRPSFSSSR
Trigger: ACGGGAGCTAGAAAAGCTAGGCCTTGGCGACAGCGTGGACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252813.5
CDS-3UTR CAA 90 bp AGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: RWADQNLSSRSDPQAEELNVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...AAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 5 (lower is better)
Translates to: GQIRISLPDRIPKLKSLSPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...AGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp CTCAATTACTTTCACTGTGGGGGTCGTCCTCTCTCCCTAATGGGCAGCAAGATGCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 5 (lower is better)
Translates to: LNYFHCGGRPLSLMGSKMPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...CATCTTGCTGCCCATTAGGGAGAGAGGACGACCCCCACAGTGAAAGTAATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAAAGGGCCAGGCTGTaGAGCACAGTTCAAGGTCGA +
Preference number: 5 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEERARL*STVQGR
Trigger: TCGACCTTGAACTGTGCTCAACAGCCTGGCCCTTTC...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp AGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACCAGGGTCAACACGCTTGGCTaGTTCTACACCAGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: SAWSKEAKVNTLGLFYTRVNTLG*FYTRLS
Trigger: ACTGAGCCTGGTGTAGAACAAGCCAAGCGTGTTGAC...CCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: GLRRPERPSVFVAIVDFANVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCCCCAAGCTGAAGAGCTaGTCTTTTCCTGGCCACACC +
Preference number: 5 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAPKLKS*SFPGHT
Trigger: GGTGTGGCCAGGAAAAGACAAGCTCTTCAGCTTGGG...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
CDS-3UTR CAA 90 bp GGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCCATTTTGTCCCTGTCTaGGCTAGACCTGTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GGGQIRISLPDRIPKLKSHFVPV*ARPVFS
Trigger: GGAGAAAACAGGTCTAGCCAAGACAGGGACAAAATG...GCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTATCCCCTTCCCCATTTaGTCCCTGTCTTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: RWADQNLSSRSDPQAEELIPFPI*SLSWLD
Trigger: GTCTAGCCAAGACAGGGACAAAATGGGGAAGGGGAT...AAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AAAGAAAGCCAGCCAGCCAGCCATATCCCAGGGTGGCCCCAGAAAGGGCCAGGCAAAATGAGCCAAATGTaGTGCATTATGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: KESQPASHIPGWPQKGPGKMSQM*CIMRKD
Trigger: ATCCTTCCTCATAATGCACAACATTTGGCTCATTTT...GCCTGGCCCTTTCTGGGGCCACCCTGGGATATGGCTGGCTGGCTGGCTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp CCCAGCCGTGGTATCGCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCCATCTTATTTCTTTTTaGAGCTACATCCCCACACGC +
Preference number: 5 (lower is better)
Translates to: PSRGIAAHGFTRPRFSLGHLISF*SYIPTR
Trigger: GCGTGTGGGGATGTAGCTCAAAAAAGAAATAAGATG...GCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGCGATACCACGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp AAGAGGAGGTGGGCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGCGGAGAATAGGGCTTaGTCCAGCTGTCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: KRRWADQNLSSRSDPQAEAENRA*SSCLQK
Trigger: CTTTTGGAGACAGCTGGACAAAGCCCTATTCTCCGC...TTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGCCCACCTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp CTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTCCAAGGTCAACACGCTaGGCTTGTTCTACACCAGGC +
Preference number: 5 (lower is better)
Translates to: LVYTECLVQRGQGQHAWLPRSTR*ACSTPG
Trigger: GCCTGGTGTAGAACAAGCCAAGCGTGTTGACCTTGG...AAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp ACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGTTCTACACGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: TECLVQRGQGQHAWLVLHESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...GTGTAGAACAAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTAACGTGGTGACTCGCTaGCACACAGCATCCATGTCG +
Preference number: 5 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFNVVTR*HTASMS
Trigger: CGACATGGATGCTGTGTGCAAGCGAGTCACCACGTT...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp GGTCTTAGGAGACCTGAGCGTCCCTCAGTGTTTGTGGCAATAGTTGATTTTGCCGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: GLRRPERPSVFVAIVDFAESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...GGCAAAATCAACTATTGCCACAAACACTGAGGGACGCTCAGGTCTCCTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp TTGATTTTGCCCTCTGACTGCTCCAGGAGGTCCAACATCTCCTCAATGATGGCTGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: LILPSDCSRRSNISSMMAESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...AGCCATCATTGAGGAGATGTTGGACCTCCTGGAGCAGTCAGAGGGCAAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS-3UTR CAA 90 bp GCAGCTCATGGATTCACCAGACCAAGATTCTCCCTGGGCATCTGGACCTCCCAGAGACTAAAAGGCATCTaGAATCTACTTTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AAHGFTRPRFSLGIWTSQRLKGI*NLLFQL
Trigger: GAGCTGGAAAAGTAGATTCAAGATGCCTTTTAGTCT...CTGGGAGGTCCAGATGCCCAGGGAGAATCTTGGTCTGGTGAATCCATGAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GCAGATCAGAATCTCTCTTCCAGATCGGATCCCCAAGCTGAAGAGCTTGTCTTTGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: ADQNLSSRSDPQAEELVFESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...AAAGACAAGCTCTTCAGCTTGGGGATCCGATCTGGAAGAGAGATTCTGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000596962.5
ENST00000600283.6
CDS-3UTR CAA 90 bp CTGAACTTACATCATCTGAGGAAGTTTACGTCATCTCATCCCTGCCTGGTAAGTGCTCATAGCTTGGTGTaGAAAGGACCACGACCCCCA +
Preference number: 5 (lower is better)
Translates to: LNLHHLRKFTSSHPCLVSAHSLV*KGPRPP
Trigger: TGGGGGTCGTGGTCCTTTCAACACCAAGCTATGAGC...ACTTACCAGGCAGGGATGAGATGACGTAAACTTCCTCAGATGATGTAAGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp CTGTTGAGCACAGTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAGCGACAGCTCATAGCTaGGTGTTGAAAGGACCACGA +
Preference number: 5 (lower is better)
Translates to: LLSTVQGRGRIERLLNLVATAHS*VLKGPR
Trigger: TCGTGGTCCTTTCAACACCAAGCTATGAGCTGTCGC...TACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAACTGTGCTCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp GTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAAAAGCCAGTCTTGGTTTGTTCCAGCCCTaGATTGGAGCAGGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: VQGRGRIERLLNLVKASLGLFQP*IGAGGL
Trigger: TAGCCCACCTGCTCCAATCAAGGGCTGGAACAAACC...AAGACTGGCTTTTACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS-3UTR CAA 90 bp CTAGTATACACTGAGTGCTTGGTCCAAAGAGGCCAAGGTCAACACGCTTGGCTTGCTACGTACAAATACTaGGCTCTGTGCCTAGTATAC +
Preference number: 5 (lower is better)
Translates to: LVYTECLVQRGQGQHAWLATYKY*ALCLVY
Trigger: GTATACTAGGCACAGAGCCAAGTATTTGTACGTAGC...AAGCCAAGCGTGTTGACCTTGGCCTCTTTGGACCAAGCACTCAGTGTATACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595066.5
CDS-3UTR CAA 90 bp GTTCAAGGTCGAGGACGCATTGAGAGGCTTTTAAATTTGGTAAAAGCCAGTCTTGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: VQGRGRIERLLNLVKASLESLDC*VLNRNL
Trigger: GAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTC...AAGACTGGCTTTTACCAAATTTAAAAGCCTCTCAATGCGTCCTCGACCTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000600283.6
CDS-3UTR CAA 90 bp AGAAAGAAAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCCAGCCAGCCAGTCTGTGGTGTCAAATTaGGGGTCTCCTAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RKKARKKERKKERKPASQSVVSN*GSPRAQ
Trigger: CTGGGCTCTAGGAGACCCCAAATTTGACACCACAGA...CTGGCTGGCTGGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269919.11
CDS GCA 72 bp GCTGCTCCATGGCGGGATCGGGCTGTGCCTCGGACCTaGTTCTGTTGCGACTGGCGCGACAGCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: AAPWRDRAVPRT*FCCDWRDSCCR
Trigger: GCGGCAGCAGCTGTCGCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS GCA 72 bp CGCCTTCCTCGGCTGCTCCATGGCGGGATCGGGCTGTaGCTCGGACCTGCTTCTGTTGCGACTGGCGCGACA +
Preference number: 6 (lower is better)
Translates to: RLPRLLHGGIGL*LGPASVATGAT
Trigger: TGTCGCGCCAGTCGCAACAGAAGCAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000600283.6
ENST00000604499.6
CDS GCA 72 bp GGGCCAAATCCCGTCACTACCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGCTGTGCCTCGGACCTG +
Preference number: 6 (lower is better)
Translates to: GPNPVTTTAFLG*SMAGSGCASDL
Trigger: CAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGTGGTAGTGACGGGATTTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS GCA 72 bp TTTCTAGCTCCCGTCACTACCACCGCCTTCCTCGGCTaGTCCATGGCGGGATCGGGCTGTGCCTCGGACCTG +
Preference number: 6 (lower is better)
Translates to: FLAPVTTTAFLG*SMAGSGCASDL
Trigger: CAGGTCCGAGGCACAGCCCGATCCCGCCATGGAGCAGCCGAGGAAGGCGGTGGTAGTGACGGGAGCTAGAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252813.5
CDS TCA 72 bp GGAACCAGTCCTGCTACCACCTTGACCTTGGACTTCTaGCTTCCAAGGCTGCCGGCATCCTGCGAGATGGTC +
Preference number: 6 (lower is better)
Translates to: GTSPATTLTLDF*LPRLPASCEMV
Trigger: GACCATCTCGCAGGATGCCGGCAGCCTTGGAAGTCAGAAGTCCAAGGTCAAGGTGGTAGCAGGACTGGTTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595552.2
CDS CAA 90 bp TGGACTGTGCTTCTCCCACAGGGCGGGGATGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTCGTACACATGCAGGTCCACGCTGTC +
Preference number: 6 (lower is better)
Translates to: WTVLLPQGGDESLDC*VLNRNLVHMQVHAV
Trigger: GACAGCGTGGACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAGCACAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS CCA 72 bp TTCTCCCACAGGGCGGGGATGAGTCTCTGGACTGTTTaGTACTCAACCGGAATCTCGTACACATGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: FSHRAGMSLWTV*YSTGISYTCRS
Trigger: GGACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS CCA 72 bp GGACTGTGCTTCTCCCACAGGGCGGGGATGAGTCTCTaGACTGTTTGGTACTCAACCGGAATCTCGTACACA +
Preference number: 6 (lower is better)
Translates to: GLCFSHRAGMSL*TVWYSTGISYT
Trigger: TGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAGCACAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS CAA 72 bp CTTCTCCCACAGGGCGGGGATGAGTCTCTGGACTGTTaGGTACTCAACCGGAATCTCGTACACATGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LLPQGGDESLDC*VLNRNLVHMQV
Trigger: GACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6
CDS TCA 72 bp ATATCTGTGGACTGTGCTTCTCCCACAGGGCGGGGATaGGTCTCTGGACTGTTTGGTACTCAACCGGAATCT +
Preference number: 6 (lower is better)
Translates to: ISVDCASPTGRG*VSGLFGTQPES
Trigger: AGATTCCGGTTGAGTACCAAACAGTCCAGAGACTCATCCCCGCCCTGTGGGAGAAGCACAGTCCACAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597431.2
CDS GCA 72 bp TGGACTGTTTGGTACTCAACCGGAATCTCGTACACATaGAGGTCCACGCTGTCGCCAAGGCCTAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: WTVWYSTGISYT*RSTLSPRPSFS
Trigger: AGAAAAGCTAGGCCTTGGCGACAGCGTGGACCTGCATGTGTACGAGATTCCGGTTGAGTACCAAACAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252813.5
ENST00000269919.11
ENST00000595066.5
ENST00000596962.5
ENST00000597431.2
ENST00000600283.6
ENST00000604499.6