RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGP (Homo sapiens)

Ensembl gene IDs: ENSG00000184207

Ensembl transcript IDs: ENST00000333503.8, ENST00000562001.1

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTaGCCCTGCCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAGGGC +
Preference number: 1 (lower is better)
Translates to: QAGEAGAPPRTLASW*PCQVLLATEEGIQG
Trigger: GCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR GCA 90 bp GAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTaGTGGCCACTGAAGAGGGAATCCAGGGCAAGGCAGGTGACCTCC +
Preference number: 1 (lower is better)
Translates to: EPRPEPWRAGGPAKS*WPLKRESRARQVTS
Trigger: GGAGGTCACCTGCCTTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR GCA 90 bp GGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTaGCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAGGGCAAGGCA +
Preference number: 1 (lower is better)
Translates to: GEAGAPPRTLASWWP*QVLLATEEGIQGKA
Trigger: TGCCTTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR CCA 90 bp AGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGCTaGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGT +
Preference number: 1 (lower is better)
Translates to: RPVKGQQSQGAGRRG*SPAQNLGELVALPS
Trigger: ACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR TCA 90 bp GGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTaGGTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGC +
Preference number: 1 (lower is better)
Translates to: GREPARRCSIPGWPC*VCCQACERSAEPRS
Trigger: GCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR TCA 90 bp TGGCATTCCAGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTTaGGTCCTCCCACCCGTGGTGAGACGGCATCACCCGGGCCAATGC +
Preference number: 1 (lower is better)
Translates to: WHSSSGVGTPVTHLL*VLPPVVRRHHPGQC
Trigger: GCATTGGCCCGGGTGATGCCGTCTCACCACGGGTGGGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CCA 90 bp CCTCATGCTGCTCTGCAGCACCCTCTGAACCCGATATCCCAGGCCTaGGAGGTGCTGAAGGCTCAGGACGCCTCTTATTGCTCTGAAGTC +
Preference number: 1 (lower is better)
Translates to: PHAALQHPLNPISQA*EVLKAQDASYCSEV
Trigger: GACTTCAGAGCAATAAGAGGCGTCCTGAGCCTTCAGCACCTCCCAGGCCTGGGATATCGGGTTCAGAGGGTGCTGCAGAGCAGCATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CCA 90 bp AAGGCTCAGGACGCCTCTTATTGCTCTGAAGTCTTTGTGACCAAGTaGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCAGGTACA +
Preference number: 1 (lower is better)
Translates to: KAQDASYCSEVFVTK*SAVTVGPREKLPGT
Trigger: TGTACCTGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGACTTCAGAGCAATAAGAGGCGTCCTGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR GCA 90 bp CCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTaGCTACGACACAGAGCACAGCTATTAATACACTTAAAATTCAAA +
Preference number: 1 (lower is better)
Translates to: PRCRLQGTEAPSVEF*LRHRAQLLIHLKFK
Trigger: TTTGAATTTTAAGTGTATTAATAGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTCCCATCGGCAGGCCCTaGTTACCTGAATCCCGGACA +
Preference number: 2 (lower is better)
Translates to: RGWSPAQNLGELVALPSPPIGRP*LPESRT
Trigger: TGTCCGGGATTCAGGTAACCAGGGCCTGCCGATGGG...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp GGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCTAATAATCAGTCCCTCTaGCCCCTGAGGGGCTGGATC +
Preference number: 2 (lower is better)
Translates to: GWSPAQNLGELVALPSPANNQSL*PLRGWI
Trigger: GATCCAGCCCCTCAGGGGGCAGAGGGACTGATTATT...AGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR TCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTCAGCCCGGAGTTCAGTaGAGGCGTCCACGCCATGGT +
Preference number: 2 (lower is better)
Translates to: SAALPAAGHRGSFSGILPQPGVQ*RRPRHG
Trigger: ACCATGGCGTGGACGCCTTCACTGAACTCCGGGCTG...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAAGCGAGCTGGTGGCCCTaGCAAGTCCTGCTGGCCACT +
Preference number: 2 (lower is better)
Translates to: EGAASRDGPAESAVRPVKASWWP*QVLLAT
Trigger: AGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGC...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR-3UTR TCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAAAGTCCCTCTGCCCCCTaGGGGGCTGGATCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: EGAASRDGPAESAVRPVKSPSAP*GAGSLN
Trigger: ATTCAGGGATCCAGCCCCTCAGGGGGCAGAGGGACT...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTATACTGATGGGGCTCTaGTCCATGCAAGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: KALVGSQPEGAASRDGPAILMGL*SMQASP
Trigger: GGGAGAGGCTTGCATGGACCAGAGCCCCATCAGTAT...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp GCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACATGCAGAGCCTGCCCCTaGCAACCCCACCCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: AAGHRGSFSGILPTTQSTCRACP*QPHPRP
Trigger: GGGCCTTGGGTGGGGTTGGCAGGGGCAGGCTCTGCA...TGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGCCAAGGGCAGGGAGATaGCACCTGGGAGCAGCCGCC +
Preference number: 2 (lower is better)
Translates to: SQCGFESLICALAPTVLQPRAGR*HLGAAA
Trigger: GGCGGCTGCTCCCAGGTGGCATCTCCCTGCCCTTGG...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTCTGAGCTCCCTGCACTaGAGCCCGGAGTTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: SAALPAAGHRGSFSGILPLSSLH*SPEFSE
Trigger: TTCACTGAACTCCGGGCTGCAGTGCAGGGAGCTCAG...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTCTGCGTTTACAGAACTaGGCAGCAGCCCTGGGTATC +
Preference number: 2 (lower is better)
Translates to: SAALPAAGHRGSFSGILPLRLQN*AAALGI
Trigger: GATACCCAGGGCTGCTGCCCAGTTCTGTAAACGCAG...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAACCTGCCAAGTCCTGCTaGCCACTGAAGAGGGAATCC +
Preference number: 2 (lower is better)
Translates to: EGAASRDGPAESAVRPVKPAKSC*PLKRES
Trigger: GGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGG...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR-3UTR TCA 90 bp AGACCCGGCTTGAGCCAACTTAGCCAAGCCAGCGTCAGTGTCACCAGCCTCATGCTGCTGTCAGGCCTGTaGAAGGTCAGCAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: RPGLSQLSQASVSVTSLMLLSGL*KVSRAK
Trigger: CTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAG...CATGAGGCTGGTGACACTGACGCTGGCTTGGCTAAGTTGGCTCAAGCCGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp GGCATTCCAGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTTGAGTCCTCCGCAGGCAGGAGAGGCTaGAGCCCCGCCCAGAACCTT +
Preference number: 2 (lower is better)
Translates to: GIPALELEPQLPIYFESSAGRRG*SPAQNL
Trigger: AAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGCCTGC...GGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CAA 90 bp TTGGCATTCCAGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTaGAGTCCTCCCACCCGTGGTGAGACGGCATCACCCGGGCCAATG +
Preference number: 2 (lower is better)
Translates to: LAFQLWSWNPSYPST*SPPTRGETASPGPM
Trigger: CATTGGCCCGGGTGATGCCGTCTCACCACGGGTGGGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAATGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR TCA 90 bp CTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTTCCAATTACACTCTTTaGAGCCACTTAGCCGAGCAG +
Preference number: 2 (lower is better)
Translates to: LVGSQPEGAASRDGPAESSNYTL*SHLAEQ
Trigger: CTGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGA...AGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR-3UTR TCA 90 bp TGGTCCATGCAAGCCTCTCCCAACAGTCAGAATAATCAGTCCCTCTGCCCCCTGCAGGCCCTGGTTACCTaGATCCCGGACAGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: WSMQASPNSQNNQSLCPLQALVT*IPDRCR
Trigger: TCTGCACCTGTCCGGGATTCAGGTAACCAGGGCCTG...CAGGGGGCAGAGGGACTGATTATTCTGACTGTTGGGAGAGGCTTGCATGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGGTGGAGCCACCCTCATaGTGCTCTGCAGCACCCTCT +
Preference number: 2 (lower is better)
Translates to: SQCGFESLICALAPTVLQVEPPS*CSAAPS
Trigger: AGAGGGTGCTGCAGAGCAGCATGAGGGTGGCTCCAC...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp GCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACAGCTTGGGGCTCTGGTCCATaGAAGCCTCTCCCAACAGTC +
Preference number: 2 (lower is better)
Translates to: AGHRGSFSGILPTTQSTAWGSGP*KPLPTV
Trigger: GACTGTTGGGAGAGGCTTGCATGGACCAGAGCCCCA...AGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACACACAGAAGGCTCCGCTaGACTTTCAGTCATACTGAT +
Preference number: 2 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTHRRLR*TFSHTD
Trigger: ATCAGTATGACTGAAAGTCCAGCGGAGCCTTCTGTG...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp GGCATTCCAGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTTGAGTCCTCCACTGGGCAGCAGCCCTaGGTATCTGAAACGGAACAG +
Preference number: 2 (lower is better)
Translates to: GIPALELEPQLPIYFESSTGQQP*VSETEQ
Trigger: CTGTTCCGTTTCAGATACCCAGGGCTGCTGCCCAGT...GGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTAACAATGAATGCCTTTaGTTAACTCCAATTACACTC +
Preference number: 2 (lower is better)
Translates to: KALVGSQPEGAASRDGPANNECL*LTPITL
Trigger: GAGTGTAATTGGAGTTAAGCAAAGGCATTCATTGTT...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR-3UTR CCA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGCAGAGGCTCCTTCAGTaGAATTTTGCAAGGTTAACA +
Preference number: 2 (lower is better)
Translates to: VCCQACERSAEPRSRQERQRLLQ*NFARLT
Trigger: TGTTAACCTTGCAAAATTCCACTGAAGGAGCCTCTG...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562001.1
3UTR-3UTR TCA 90 bp TGGTCCATGCAAGCCTCTCCCAACAGTCAGAATAATCAGTCCCTCTGCCCCCTGTCCAATTACACTCTTTaGAGCCACTTAGCCGAGCAG +
Preference number: 2 (lower is better)
Translates to: WSMQASPNSQNNQSLCPLSNYTL*SHLAEQ
Trigger: CTGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGA...CAGGGGGCAGAGGGACTGATTATTCTGACTGTTGGGAGAGGCTTGCATGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR TCA 90 bp AGACCCGGCTTGAGCCAACTTAGCCAAGCCAGCGTCAGTGTCACCAGCCTCATGGAGGGGCTGGATCCCTaGATGAGTTTTTCAATAAAA +
Preference number: 2 (lower is better)
Translates to: RPGLSQLSQASVSVTSLMEGLDP*MSFSIK
Trigger: TTTTATTGAAAAACTCATTCAGGGATCCAGCCCCTC...CATGAGGCTGGTGACACTGACGCTGGCTTGGCTAAGTTGGCTCAAGCCGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CAA 90 bp GCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTaGCCTACGACACAGAGCACAGCTATTAATACACTTAAAATTCAA +
Preference number: 2 (lower is better)
Translates to: AALPAAGHRGSFSGI*PTTQSTAINTLKIQ
Trigger: TTGAATTTTAAGTGTATTAATAGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CCA 90 bp AGTTGTTCAAAGTTAAAAACTGGTAGCAGCACTGCTCTGAGCTCCCTGCACTGCCAGCAGAGCTTTAGCTaGGCTGCGTTTACAGAACTG +
Preference number: 2 (lower is better)
Translates to: SCSKLKTGSSTALSSLHCQQSFS*AAFTEL
Trigger: CAGTTCTGTAAACGCAGCCCAGCTAAAGCTCTGCTG...GCAGTGCAGGGAGCTCAGAGCAGTGCTGCTACCAGTTTTTAACTTTGAACAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp GCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACAGCTAACAATGAATGCCTTTaGTTAACTCCAATTACACTC +
Preference number: 2 (lower is better)
Translates to: AGHRGSFSGILPTTQSTANNECL*LTPITL
Trigger: GAGTGTAATTGGAGTTAAGCAAAGGCATTCATTGTT...AGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR GCA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCCCTTCAGTGGAATTTTaGAAGGTTAACAATGAATGC +
Preference number: 2 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSPSVEF*KVNNEC
Trigger: GCATTCATTGTTAACCTTGCAAAATTCCACTGAAGG...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562001.1
3UTR GCA 72 bp GGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTaGCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAG +
Preference number: 3 (lower is better)
Translates to: GAPPRTLASWWP*QVLLATEEGIQ
Trigger: CTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR GCA 72 bp CTCCCACCCGTGGTGAGACGGCATCACCCGGGCCAATaGAAGGTGAGAGCAAGGACACCTGAGCCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: LPPVVRRHHPGQ*KVRARTPEPVW
Trigger: CCACACTGGCTCAGGTGTCCTTGCTCTCACCTTGCATTGGCCCGGGTGATGCCGTCTCACCACGGGTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CAA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCAGCCCCGCCCAGAACCTaGGCGAGCTGGTGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPAPPRT*ASWWPC
Trigger: GCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGC...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR TCA 72 bp TGCTCTGAGCTCCCTGCACTGCAGCCCGGAGTTCAGTaGAGGCGTCCACGCCATGGTAGCTGCTCCGTCCAA +
Preference number: 3 (lower is better)
Translates to: CSELPALQPGVQ*RRPRHGSCSVQ
Trigger: TTGGACGGAGCAGCTACCATGGCGTGGACGCCTTCACTGAACTCCGGGCTGCAGTGCAGGGAGCTCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR TCA 72 bp CCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTaGGTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PARRCSIPGWPC*VCCQACERSAE
Trigger: CTCTGCTGACCTTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR-3UTR CAA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAACTCCAATTACACTCTTaGAAGCCACTTAGCCGAGCA +
Preference number: 3 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQLQLHS*KPLSRA
Trigger: TGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGAG...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR CCA 72 bp GCTCTGCAGCACCCTCTGAACCCGATATCCCAGGCCTaGGAGGTGCTGAAGGCTCAGGACGCCTCTTATTGC +
Preference number: 3 (lower is better)
Translates to: ALQHPLNPISQA*EVLKAQDASYC
Trigger: GCAATAAGAGGCGTCCTGAGCCTTCAGCACCTCCCAGGCCTGGGATATCGGGTTCAGAGGGTGCTGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CAA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGCCCCACCTATTAATTaGGGTAACTGGTTTTCAATT +
Preference number: 3 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQAPPIN*GNWFSI
Trigger: AATTGAAAACCAGTTACCCAAATTAATAGGTGGGGC...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR TCA 72 bp AGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTTaGGTCCTCCCACCCGTGGTGAGACGGCATCACCCG +
Preference number: 3 (lower is better)
Translates to: SSGVGTPVTHLL*VLPPVVRRHHP
Trigger: CGGGTGATGCCGTCTCACCACGGGTGGGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CCA 72 bp GCTGGGAGTGGGCAGTTGGCATTCCAGCTCTGGAGTTaGAACCCCAGTTACCCATCTACTTTGAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: AGSGQLAFQLWS*NPSYPSTLSPP
Trigger: GGGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAATGCCAACTGCCCACTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR GCA 72 bp GCCTGGGAGGTGCTGAAGGCTCAGGACGCCTCTTATTaGTCTGAAGTCTTTGTGACCAAGTGGAGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: AWEVLKAQDASY*SEVFVTKWSAV
Trigger: CACAGCACTCCACTTGGTCACAAAGACTTCAGAGCAATAAGAGGCGTCCTGAGCCTTCAGCACCTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR TCA 72 bp AAGGTGAGAGCAAGGACACCTGAGCCAGTGTGGGTTTaGGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCT +
Preference number: 3 (lower is better)
Translates to: KVRARTPEPVWV*EFNLCSGAHSA
Trigger: AGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCTCAGGTGTCCTTGCTCTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR-3UTR CAA 90 bp TGGTGGCCCTGCCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAGGGCAAGGCAGCCCCACCTATTAATTaGGGTAACTGGTTTTCAATT +
Preference number: 3 (lower is better)
Translates to: WWPCQVLLATEEGIQGKAAPPIN*GNWFSI
Trigger: AATTGAAAACCAGTTACCCAAATTAATAGGTGGGGC...TGCCTTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR TCA 72 bp GGAGGTGCTGAAGGCTCAGGACGCCTCTTATTGCTCTaGAGTCTTTGTGACCAAGTGGAGTGCTGTGACTGT +
Preference number: 3 (lower is better)
Translates to: GGAEGSGRLLLL*SLCDQVECCDC
Trigger: ACAGTCACAGCACTCCACTTGGTCACAAAGACTTCAGAGCAATAAGAGGCGTCCTGAGCCTTCAGCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR CCA 72 bp GACGCCTCTTATTGCTCTGAAGTCTTTGTGACCAAGTaGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: DASYCSEVFVTK*SAVTVGPREKL
Trigger: CAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGACTTCAGAGCAATAAGAGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
3UTR GCA 72 bp CGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTaGCTACGACACAGAGCACAGCTATTAATACACTTA +
Preference number: 3 (lower is better)
Translates to: RLQGTEAPSVEF*LRHRAQLLIHL
Trigger: TAAGTGTATTAATAGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAACTGCCCTGGGCGCTCTaGCACGGCAGCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQLPWAL*HGSPPA
Trigger: AGCTGGTGGGCTGCCGTGTCAGAGCGCCCAGGGCAG...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTACCCTCGCCCTGCAGTaGCTCGGGCCCCACGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGWSPAQNLGELVALPSPTLALQ*LGPHAH
Trigger: GTGGGCGTGGGGCCCGAGCCACTGCAGGGCGAGGGT...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp AGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCCCAAGGGCAGGGAGATaGCACCTGGGAGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RLEPRPEPWRAGGPAKSCPRAGR*HLGAAA
Trigger: GGCGGCTGCTCCCAGGTGGCATCTCCCTGCCCTTGG...GCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCTAGCCGCGCTGCCGGCTaGAGGGCACAGAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GWSPAQNLGELVALPSPASRAAG*RAQRLL
Trigger: AAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCT...AGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAACGGTGCAGTAGGCCGTaGCGAAGACCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQRCSRP*RRPPGW
Trigger: CCAGCCTGGAGGTCTTCGGCACGGCCTACTGCACCG...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGCGAGCTGGTGGCCCTaGCAAGTCCTGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQASWWP*QVLLAT
Trigger: AGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGC...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp AGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCCTGAGCTCTGCTCCCTaGCCTGGGCGCTCTGACACG +
Preference number: 4 (lower is better)
Translates to: RLEPRPEPWRAGGPAKSCLSSAP*PGRSDT
Trigger: CGTGTCAGAGCGCCCAGGGCAGGGAGCAGAGCTCAG...GCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTCCCCGCCCAGAACCTTaGCGAGCTGGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KALVGSQPEGAASRDGPAPRPEP*RAGGPA
Trigger: GGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGG...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAACCTTGGCGAGCTGGTaGCCCTGCCAAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQTLASW*PCQVLL
Trigger: CAGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGT...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCAGGCAGGAGAGGCTaGAGCCCCGCCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: RGWSPAQNLGELVALPSPAGRRG*SPAQNL
Trigger: AAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGCCTGC...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp TGGTGGCCCTGCCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAGGGCAAGGCAGGCTGGGCTTCCCGATaGTGTCGGCCTGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WWPCQVLLATEEGIQGKAGWASR*CRPGAG
Trigger: CCCAGCGCCAGGCCGACATCATCGGGAAGCCCAGCC...TGCCTTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCTCAGGCCCTGGTTACCTaGATCCCGGACAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GWSPAQNLGELVALPSPAQALVT*IPDRCR
Trigger: TCTGCACCTGTCCGGGATTCAGGTAACCAGGGCCTG...AGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTACCTTGGCGAGCTGGTaGCCCTGCCAAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGWSPAQNLGELVALPSPTLASW*PCQVLL
Trigger: CAGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGT...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp AGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCAGAACCTTGGCGAGCTaGTGGCCCTGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLEPRPEPWRAGGPAKSCRTLAS*WPCQVL
Trigger: CAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCT...GCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp GGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCTGAGTGGAGACTCCGGTaGGGGTCAGGATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GWSPAQNLGELVALPSPAEWRLR*GSGWSS
Trigger: TGAAGACCATCCTGACCCTCACCGGAGTCTCCACTC...AGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp AGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCAGTCCTGCTGGCCACTaGAGAGGGAATCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RLEPRPEPWRAGGPAKSCSPAGH*RGNPGQ
Trigger: TTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACT...GCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAACCAAGTGGAGTGCTGTaGCTGTGGGGCCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQPSGVL*LWGQER
Trigger: TCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGG...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGCAGGTAGAGCGCGGTaGAGTAGGCCGTGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: KALVGSQPEGAASRDGPAAGRAR*SRPCRR
Trigger: TCTTCGGCACGGCCTACTGCACCGCGCTCTACCTGC...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGGTTGTCCATGTTGGTaGCCACGAGCAGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KALVGSQPEGAASRDGPAGCPCW*PRAGSR
Trigger: CCGGCTGCCTGCTCGTGGGCACCAACATGGACAACC...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCTGGCCAAGAGAGAAGCTaGCAGGTACAGGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: GWSPAQNLGELVALPSPAGQERS*QVQGKA
Trigger: CGCCTTTCCCTGTACCTGGCAGCTTCTCTCTTGGCC...AGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAATGGCTGCAGGGCACCTaGATGACAGGCATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQWLQGT*MTGIPW
Trigger: CCAAGGAATGCCTGTCATCCAGGTGCCCTGCAGCCA...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp AGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCCCTGCCAAGTCCTGCTaGCCACTGAAGAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: RLEPRPEPWRAGGPAKSCPAKSC*PLKRES
Trigger: GGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGG...GCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTAGAACCTTGGCGAGCTaGTGGCCCTGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RGWSPAQNLGELVALPSPRTLAS*WPCQVL
Trigger: CAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCT...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp CTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCAGGCAGGAGAGGCTaGAGCCCCGCCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: LVGSQPEGAASRDGPAESAGRRG*SPAQNL
Trigger: AAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGCCTGC...AGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp TGGTGGCCCTGCCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAGGGCAAGGCAACCCGGTACCCGCGATaGAGCGGCCGTTCTCAAGCG +
Preference number: 4 (lower is better)
Translates to: WWPCQVLLATEEGIQGKATRYPR*SGRSQA
Trigger: CGCTTGAGAACGGCCGCTTCATCGCGGGTACCGGGT...TGCCTTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GAGCCGCGCTGCTGGCTGCAGGGCACCTGGATGACAGGCATTCCTTGGCCAACACGGTGCGCTCGGGGTTaGTGCCGTATTCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: EPRCWLQGTWMTGIPWPTRCARG*CRIPGT
Trigger: TGTCCCAGGAATACGGCATCAACCCCGAGCGCACCG...TGTTGGCCAAGGAATGCCTGTCATCCAGGTGCCCTGCAGCCAGCAGCGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGTGCAGAGCCTGCCCCTaGCAACCCCACCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VCCQACERSAEPRSRQERCRACP*QPHPRP
Trigger: GGGCCTTGGGTGGGGTTGGCAGGGGCAGGCTCTGCA...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAAATGTCGGCCTGGCGCTaGGCGGCCATCTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: EGAASRDGPAESAVRPVKMSAWR*AAISTA
Trigger: AGCCGTGGAGATGGCCGCCCAGCGCCAGGCCGACAT...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTCCCATCGGCAGGCCCTaGTTACCTGAATCCCGGACA +
Preference number: 4 (lower is better)
Translates to: KALVGSQPEGAASRDGPAPIGRP*LPESRT
Trigger: TGTCCGGGATTCAGGTAACCAGGGCCTGCCGATGGG...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACACCCCGCCCAGAACCTTaGCGAGCTGGTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTPRPEP*RAGGPA
Trigger: GGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGG...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTCATGCGCTCCTGGTGTaGCTGCACCCTGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAALPAAGHRGSFSGILPHALLV*LHPVRP
Trigger: TGGCCTGACAGGGTGCAGTCACACCAGGAGCGCATG...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp AACCCCACCCAAGGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGAGCCGCGCTGCCGGCTaGAGGGCACAGAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: NPTQGPEPSPQRLPSLKVSRAAG*RAQRLL
Trigger: AAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCT...CACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCCTTGGGTGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACACCGATGATGTCGGCCTaGCGCTGGGCGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTPMMSA*RWAAIS
Trigger: GGAGATGGCCGCCCAGCGCCAGGCCGACATCATCGG...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCTTTGTGACCAAGTaGAGTGCTGTGACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQVFVTK*SAVTVG
Trigger: CCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp GAGCCGCGCTGCTGGCTGCAGGGCACCTGGATGACAGGCATTCCTTGGCCAACACTGCTGTCAGGCCTGTaGAAGGTCAGCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: EPRCWLQGTWMTGIPWPTLLSGL*KVSRAK
Trigger: CTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAG...TGTTGGCCAAGGAATGCCTGTCATCCAGGTGCCCTGCAGCCAGCAGCGCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGAGCAAGGACACCTaGGCCAGTGTGGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KALVGSQPEGAASRDGPAESKDT*ASVGLR
Trigger: TCTCAAACCCACACTGGCTCAGGTGTCCTTGCTCTC...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCATCCTCCCACCCGTGGTaGGACGGCATCACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPSSHPW*DGITRA
Trigger: GGCCCGGGTGATGCCGTCTCACCACGGGTGGGAGGA...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACACGGCCAGGGCTGGGCTaGCCAGCACGTAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AAGHRGSFSGILPTTQSTRPGLG*PARRPW
Trigger: CCAAGGCCTACGTGCTGGGCAGCCCAGCCCTGGCCG...TGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGCGCTCCTGGTGTGACTaGACCCTGTCAGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: VCCQACERSAEPRSRQERRSWCD*TLSGQT
Trigger: GGTCTGGCCTGACAGGGTGCAGTCACACCAGGAGCG...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GAAGGCTCCGCTGGACTTTCAGTCATACTGATGGGGCTCTGGTCCATGCAAGCCGGGCCAGAGACAGGATaGACGGGGACTCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EGSAGLSVILMGLWSMQAGPETG*TGTPSP
Trigger: GGGGCTGGGAGTCCCCGTGCATCCTGTCTCTGGCCC...GGCTTGCATGGACCAGAGCCCCATCAGTATGACTGAAAGTCCAGCGGAGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGGCCGGTTGTCCATGTTaGTGCCCACGAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VCCQACERSAEPRSRQERAGCPC*CPRAGS
Trigger: GCTGCCTGCTCGTGGGCACCAACATGGACAACCGGC...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAAGGCCCTGCCAAGTCCTaGTGGCCACTGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EGAASRDGPAESAVRPVKGPAKS*WPLKRE
Trigger: TTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCC...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAACGGGTGTGAGCCACTaGGCCCGGGCCAGCATTACT +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTTGVSH*ARASIT
Trigger: AGTAATGCTGGCCCGGGCGCAGTGGCTCACACCCGT...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAAAGTCCTGCTGGCCACTaGAGAGGGAATCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: EGAASRDGPAESAVRPVKSPAGH*RGNPGQ
Trigger: TTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACT...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTCGCCTCTTATTGCTCTaGAGTCTTTGTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: RGWSPAQNLGELVALPSPRLLLL*SLCDQV
Trigger: CACTTGGTCACAAAGACTTCAGAGCAATAAGAGGCG...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACACGGGCCAATGCAAGGTaGGAGCAAGGACACCTGAGC +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTRANAR*EQGHLS
Trigger: GCTCAGGTGTCCTTGCTCTCACCTTGCATTGGCCCG...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACACCTCCACTCCCACCCTaGTGGGAGGCACAGGGACAC +
Preference number: 4 (lower is better)
Translates to: AAGHRGSFSGILPTTQSTPPLPP*WEAQGH
Trigger: GTGTCCCTGTGCCTCCCAGCAGGGTGGGAGTGGAGG...TGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAACTGAGCTCCCTGCACTaGAGCCCGGAGTTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: EGAASRDGPAESAVRPVKLSSLH*SPEFSE
Trigger: TTCACTGAACTCCGGGCTGCAGTGCAGGGAGCTCAG...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCAGCGAGCTGGTGGCCCTaGCAAGTCCTGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPASWWP*QVLLAT
Trigger: AGTGGCCAGCAGGACTTGGCAGGGCCACCAGCTCGC...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGTGGCGCCCACAGTGCTaGAGCCCCTCATGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SQCGFESLICALAPTVLQWRPQC*SPSWAR
Trigger: TCTGGCCCATGAGGGGCTGCAGCACTGTGGGCGCCA...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGTCTGCCATGCGCTCCTaGTGTGACTGCACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VCCQACERSAEPRSRQERSAMRS*CDCTLS
Trigger: TGACAGGGTGCAGTCACACCAGGAGCGCATGGCAGA...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AACCCCACCCAAGGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGTGCTGCAGCCCCTCATaGGCCAGAGACAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: NPTQGPEPSPQRLPSLKVCCSPS*ARDRMH
Trigger: GTGCATCCTGTCTCTGGCCCATGAGGGGCTGCAGCA...CACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCCTTGGGTGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTGACTTTCAGTCATACTaGTGGGGCTCTGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SAALPAAGHRGSFSGILPDFQSY*WGSGPC
Trigger: GCATGGACCAGAGCCCCATCAGTATGACTGAAAGTC...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGGAGGTGGGAGAGTGGTaGGGGCAGCACTTTGCACCC +
Preference number: 4 (lower is better)
Translates to: SQCGFESLICALAPTVLQEVGEW*GQHFAP
Trigger: GGGTGCAAAGTGCTGCCCTCACCACTCTCCCACCTC...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAACAGACACTCAGTTGTaGCATCAGAGTGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQTDTQL*HQSGFQ
Trigger: TTGAAAACCACTCTGATGTCACAACTGAGTGTCTGT...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACAGCTCAGCCCGGAGTTCAGTaGAGGCGTCCACGCCATGGT +
Preference number: 4 (lower is better)
Translates to: AGHRGSFSGILPTTQSTAQPGVQ*RRPRHG
Trigger: ACCATGGCGTGGACGCCTTCACTGAACTCCGGGCTG...AGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGAATAATCAGTCCCTCTaGCCCCTGAGGGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VCCQACERSAEPRSRQERNNQSL*PLRGWI
Trigger: GATCCAGCCCCTCAGGGGGCAGAGGGACTGATTATT...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGCATCTTCGATTACAGGGAGATGCCACCTaGGAGCAGCCGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPEPSPQRLPSLKVHLRLQGDAT*EQPPPP
Trigger: TGGAGGAGGCGGCTGCTCCCAGGTGGCATCTCCCTG...TAATCGAAGATGCACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTGTCTTTGTGACCAAGTaGAGTGCTGTGACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SAALPAAGHRGSFSGILPVFVTK*SAVTVG
Trigger: CCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGAGGGGCTGGATCCCTaGATGAGTTTTTCAATAAAA +
Preference number: 4 (lower is better)
Translates to: RGWSPAQNLGELVALPSPEGLDP*MSFSIK
Trigger: TTTTATTGAAAAACTCATTCAGGGATCCAGCCCCTC...AGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGAGGCCAGACCCGGCTTaGGCCAACTTAGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SQCGFESLICALAPTVLQRPDPA*ANLAKP
Trigger: TGGCTTGGCTAAGTTGGCTCAAGCCGGGTCTGGCCT...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AGACCCGGCTTGAGCCAACTTAGCCAAGCCAGCGTCAGTGTCACCAGCCTCATGGTTACCCATCTACTTTaGGTCCTCCCACCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RPGLSQLSQASVSVTSLMVTHLL*VLPPVV
Trigger: CACCACGGGTGGGAGGACTCAAAGTAGATGGGTAAC...CATGAGGCTGGTGACACTGACGCTGGCTTGGCTAAGTTGGCTCAAGCCGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACACAAAACATCTTCCTCTaGACCAGGCTGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTQNIFL*TRLGVG
Trigger: GCCCACTCCCAGCCTGGTTCAGAGGAAGATGTTTTG...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp CTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTCCTTCAGTGGAATTTTaGCTACGACACAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LVGSQPEGAASRDGPAESPSVEF*LRHRAQ
Trigger: CTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGG...AGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GAGCCGCGCTGCTGGCTGCAGGGCACCTGGATGACAGGCATTCCTTGGCCAACACAGGACGCCTCTTATTaGTCTGAAGTCTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: EPRCWLQGTWMTGIPWPTQDASY*SEVFVT
Trigger: GGTCACAAAGACTTCAGAGCAATAAGAGGCGTCCTG...TGTTGGCCAAGGAATGCCTGTCATCCAGGTGCCCTGCAGCCAGCAGCGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCAGTGGAGCCACCCTCATaGTGCTCTGCAGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPVEPPS*CSAAPS
Trigger: AGAGGGTGCTGCAGAGCAGCATGAGGGTGGCTCCAC...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACACATCACCCGGGCCAATaGAAGGTGAGAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTHHPGQ*KVRART
Trigger: TGTCCTTGCTCTCACCTTGCATTGGCCCGGGTGATG...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AACCCCACCCAAGGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGACTGGGCAGCAGCCCTaGGTATCTGAAACGGAACAG +
Preference number: 4 (lower is better)
Translates to: NPTQGPEPSPQRLPSLKVTGQQP*VSETEQ
Trigger: CTGTTCCGTTTCAGATACCCAGGGCTGCTGCCCAGT...CACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCCTTGGGTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp TGGTCCATGCAAGCCTCTCCCAACAGTCAGAATAATCAGTCCCTCTGCCCCCTGCCGATATCCCAGGCCTaGGAGGTGCTGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WSMQASPNSQNNQSLCPLPISQA*EVLKAQ
Trigger: CTGAGCCTTCAGCACCTCCCAGGCCTGGGATATCGG...CAGGGGGCAGAGGGACTGATTATTCTGACTGTTGGGAGAGGCTTGCATGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CAA 72 bp CAGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTaGAGTCCTCCCACCCGTGGTGAGACGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: QLWSWNPSYPST*SPPTRGETASP
Trigger: GGGTGATGCCGTCTCACCACGGGTGGGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACAGCTACACGCAGTCGAAAATaGAGCGGCTGGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: AGHRGSFSGILPTTQSTATRSRK*SGWASR
Trigger: TCGGGAAGCCCAGCCGCTTCATTTTCGACTGCGTGT...AGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TGGTCCATGCAAGCCTCTCCCAACAGTCAGAATAATCAGTCCCTCTGCCCCCTGCCAAGTGGAGTGCTGTaGCTGTGGGGCCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: WSMQASPNSQNNQSLCPLPSGVL*LWGQER
Trigger: TCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGG...CAGGGGGCAGAGGGACTGATTATTCTGACTGTTGGGAGAGGCTTGCATGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGCATCTTCGATTACTCTGCAGCACCCTCTaGACCCGATATCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GPEPSPQRLPSLKVHLRLLCSTL*TRYPRP
Trigger: AGGCCTGGGATATCGGGTTCAGAGGGTGCTGCAGAG...TAATCGAAGATGCACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TGGTCCATGCAAGCCTCTCCCAACAGTCAGAATAATCAGTCCCTCTGCCCCCTGCAAGAGAGGCATCACTaGGGCTGCATCTGCCATGCG +
Preference number: 4 (lower is better)
Translates to: WSMQASPNSQNNQSLCPLQERHH*GCICHA
Trigger: CGCATGGCAGATGCAGCCTCAGTGATGCCTCTCTTG...CAGGGGGCAGAGGGACTGATTATTCTGACTGTTGGGAGAGGCTTGCATGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGTGGGGCTCTGGTCCATaGAAGCCTCTCCCAACAGTC +
Preference number: 4 (lower is better)
Translates to: SQCGFESLICALAPTVLQWGSGP*KPLPTV
Trigger: GACTGTTGGGAGAGGCTTGCATGGACCAGAGCCCCA...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCAGGCCTGGGAGGTGCTaGAGGCTCAGGACGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPRPGRC*RLRTPL
Trigger: AAGAGGCGTCCTGAGCCTTCAGCACCTCCCAGGCCT...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp GGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAGTCCTGCTAACAATGAATGCCTTTaGTTAACTCCAATTACACTC +
Preference number: 4 (lower is better)
Translates to: GWSPAQNLGELVALPSPANNECL*LTPITL
Trigger: GAGTGTAATTGGAGTTAAGCAAAGGCATTCATTGTT...AGCAGGACTTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp TCAGCCGCGCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTTCACCTGGGTATAAATaGACACTTGAGACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SAALPAAGHRGSFSGILPSPGYK*TLETAE
Trigger: CTCTGCTGTCTCAAGTGTGCATTTATACCCAGGTGA...AGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGCGCGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GGCATTCCAGCTCTGGAGTTGGAACCCCAGTTACCCATCTACTTTGAGTCCTCCCCACGCCATGGTAGCTaGTCCGTCCAAATCACCTGG +
Preference number: 4 (lower is better)
Translates to: GIPALELEPQLPIYFESSPRHGS*SVQITW
Trigger: CCAGGTGATTTGGACGGAGCAGCTACCATGGCGTGG...GGAGGACTCAAAGTAGATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp TGGTCCATGCAAGCCTCTCCCAACAGTCAGAATAATCAGTCCCTCTGCCCCCTGCTGCGTTTACAGAACTaGGCAGCAGCCCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: WSMQASPNSQNNQSLCPLLRLQN*AAALGI
Trigger: GATACCCAGGGCTGCTGCCCAGTTCTGTAAACGCAG...CAGGGGGCAGAGGGACTGATTATTCTGACTGTTGGGAGAGGCTTGCATGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GAAGGCTCCGCTGGACTTTCAGTCATACTGATGGGGCTCTGGTCCATGCAAGCCAGCCTTCCAAAGCGTTaGGATTACGGGTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EGSAGLSVILMGLWSMQASLPKR*DYGCEP
Trigger: TGGCTCACACCCGTAATCCCAACGCTTTGGAAGGCT...GGCTTGCATGGACCAGAGCCCCATCAGTATGACTGAAAGTCCAGCGGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AACCCCACCCAAGGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGTCCAATTACACTCTTTaGAGCCACTTAGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: NPTQGPEPSPQRLPSLKVSNYTL*SHLAEQ
Trigger: CTGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGA...CACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCCTTGGGTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AGTTGTTCAAAGTTAAAAACTGGTAGCAGCACTGCTCTGAGCTCCCTGCACTGCAGGCCTGGGAGGTGCTaGAGGCTCAGGACGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SCSKLKTGSSTALSSLHCRPGRC*RLRTPL
Trigger: AAGAGGCGTCCTGAGCCTTCAGCACCTCCCAGGCCT...GCAGTGCAGGGAGCTCAGAGCAGTGCTGCTACCAGTTTTTAACTTTGAACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp AACCCCACCCAAGGCCCAGAACCCAGCCCACAACGCCTTCCAAGCCTAAAAGTGGAGCCAGTGTGGGTTTaGGAGTTTAATCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NPTQGPEPSPQRLPSLKVEPVWV*EFNLCS
Trigger: AGAGCACAGATTAAACTCTCAAACCCACACTGGCTC...CACTTTTAGGCTTGGAAGGCGTTGTGGGCTGGGTTCTGGGCCTTGGGTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GCTGCCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACATTGATGCCGTATTCCTaGGACACGCAGTCGAAAATG +
Preference number: 4 (lower is better)
Translates to: AAGCRAQRLLQWNFAYDTLMPYS*DTQSKM
Trigger: CATTTTCGACTGCGTGTCCCAGGAATACGGCATCAA...TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCTCCCAGAGCCCTGGATaGCTGACAGGCATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSSQSPG*LTGIPW
Trigger: CCAAGGAATGCCTGTCAGTCATCCAGGGCTCTGGGA...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCCTGCTGTCAGGCCTGTaGAAGGTCAGCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSLLSGL*KVSRAK
Trigger: CTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAG...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp AGTTGTTCAAAGTTAAAAACTGGTAGCAGCACTGCTCTGAGCTCCCTGCACTGCGGCCCTGCCAAGTCCTaGTGGCCACTGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SCSKLKTGSSTALSSLHCGPAKS*WPLKRE
Trigger: TTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCC...GCAGTGCAGGGAGCTCAGAGCAGTGCTGCTACCAGTTTTTAACTTTGAACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCGGCCAAGAGAGAAGCTaGCAGGTACAGGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSGQERS*QVQGKA
Trigger: CGCCTTTCCCTGTACCTGGCAGCTTCTCTCTTGGCC...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCAGGCTGCATCTGCCATaGGCTCCTGGTGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPRLHLP*APGVTA
Trigger: TGCAGTCACACCAGGAGCGCATGGCAGATGCAGCCT...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp CTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTCCTTCAGTGGAATTTTaGAAGGTTAACAATGAATGC +
Preference number: 4 (lower is better)
Translates to: LVGSQPEGAASRDGPAESPSVEF*KVNNEC
Trigger: GCATTCATTGTTAACCTTGCAAAATTCCACTGAAGG...AGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562001.1
CDS-3UTR CCA 90 bp GAAGGCTCCGCTGGACTTTCAGTCATACTGATGGGGCTCTGGTCCATGCAAGCCCAGAGGCTCCTTCAGTaGAATTTTGCCTACGACACA +
Preference number: 4 (lower is better)
Translates to: EGSAGLSVILMGLWSMQAQRLLQ*NFAYDT
Trigger: TGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTG...GGCTTGCATGGACCAGAGCCCCATCAGTATGACTGAAAGTCCAGCGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTGGCTGCAGGGCACCTaGATGACAGGCATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPWLQGT*MTGIPW
Trigger: CCAAGGAATGCCTGTCATCCAGGTGCCCTGCAGCCA...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCGCAGCCCTGGGTATCTaGAACGGAACAGACACTCAG +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPAALGI*NGTDTQ
Trigger: CTGAGTGTCTGTTCCGTTTCAGATACCCAGGGCTGC...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TGGTGGCCCTGCCAAGTCCTGCTGGCCACTGAAGAGGGAATCCAGGGCAAGGCATTCAAATCCATTGCCTaGCACAGTTGTTCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: WWPCQVLLATEEGIQGKAFKSIA*HSCSKL
Trigger: TAACTTTGAACAACTGTGTCAGGCAATGGATTTGAA...TGCCTTGCCCTGGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGGGCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AGTTGTTCAAAGTTAAAAACTGGTAGCAGCACTGCTCTGAGCTCCCTGCACTGCCCTGCCAAGTCCTGCTaGCCACTGAAGAGGGAATCC +
Preference number: 4 (lower is better)
Translates to: SCSKLKTGSSTALSSLHCPAKSC*PLKRES
Trigger: GGATTCCCTCTTCAGTGGCCAGCAGGACTTGGCAGG...GCAGTGCAGGGAGCTCAGAGCAGTGCTGCTACCAGTTTTTAACTTTGAACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AGTTGTTCAAAGTTAAAAACTGGTAGCAGCACTGCTCTGAGCTCCCTGCACTGCGAACCAGGCTGGGAGTaGGCAGTTGGCATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCSKLKTGSSTALSSLHCEPGWE*AVGIPA
Trigger: AGCTGGAATGCCAACTGCCCACTCCCAGCCTGGTTC...GCAGTGCAGGGAGCTCAGAGCAGTGCTGCTACCAGTTTTTAACTTTGAACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TTAGCCGAGCAGATGCTTAAGCCCCACCTATTAATTTGGGTAACTGGTTTTCAAAGTCCCTCTGCCCCCTaGGGGGCTGGATCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LAEQMLKPHLLIWVTGFQSPSAP*GAGSLN
Trigger: ATTCAGGGATCCAGCCCCTCAGGGGGCAGAGGGACT...TTGAAAACCAGTTACCCAAATTAATAGGTGGGGCTTAAGCATCTGCTCGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp TTAGCCGAGCAGATGCTTAAGCCCCACCTATTAATTTGGGTAACTGGTTTTCAAGTAGCAGCACTGCTCTaGGCTCCCTGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LAEQMLKPHLLIWVTGFQVAALL*APCTAA
Trigger: GGCTGCAGTGCAGGGAGCTCAGAGCAGTGCTGCTAC...TTGAAAACCAGTTACCCAAATTAATAGGTGGGGCTTAAGCATCTGCTCGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp AGTTGTTCAAAGTTAAAAACTGGTAGCAGCACTGCTCTGAGCTCCCTGCACTGCATACTGATGGGGCTCTaGTCCATGCAAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SCSKLKTGSSTALSSLHCILMGL*SMQASP
Trigger: GGGAGAGGCTTGCATGGACCAGAGCCCCATCAGTAT...GCAGTGCAGGGAGCTCAGAGCAGTGCTGCTACCAGTTTTTAACTTTGAACAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333503.8
3UTR CAA 72 bp CCGGCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTaGCCTACGACACAGAGCACAGCTATTAATACACTT +
Preference number: 4 (lower is better)
Translates to: PAAGHRGSFSGI*PTTQSTAINTL
Trigger: AAGTGTATTAATAGCTGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCCAGCAGAGCTTTAGCTaGGCTGCGTTTACAGAACTG +
Preference number: 4 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSQQSFS*AAFTEL
Trigger: CAGTTCTGTAAACGCAGCCCAGCTAAAGCTCTGCTG...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp TTAGCCGAGCAGATGCTTAAGCCCCACCTATTAATTTGGGTAACTGGTTTTCAACACCAGCCTCATGGGTaGAGCCACCCTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAEQMLKPHLLIWVTGFQHQPHG*SHPHAA
Trigger: AGCAGCATGAGGGTGGCTCCACCCATGAGGCTGGTG...TTGAAAACCAGTTACCCAAATTAATAGGTGGGGCTTAAGCATCTGCTCGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CCA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCACAGAGGCTCCTTCAGTaGAATTTTGCAAGGTTAACA +
Preference number: 4 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPQRLLQ*NFARLT
Trigger: TGTTAACCTTGCAAAATTCCACTGAAGGAGCCTCTG...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562001.1
CDS-3UTR TCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCAATTACACTCTTTaGAGCCACTTAGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPSNYTL*SHLAEQ
Trigger: CTGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGA...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR TCA 90 bp TTAGCCGAGCAGATGCTTAAGCCCCACCTATTAATTTGGGTAACTGGTTTTCAATCCCAGAGCCCTGGATaGCTGACAGGCATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAEQMLKPHLLIWVTGFQSQSPG*LTGIPW
Trigger: CCAAGGAATGCCTGTCAGTCATCCAGGGCTCTGGGA...TTGAAAACCAGTTACCCAAATTAATAGGTGGGGCTTAAGCATCTGCTCGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCCAGGACGCCTCTTATTaGTCTGAAGTCTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSQDASY*SEVFVT
Trigger: GGTCACAAAGACTTCAGAGCAATAAGAGGCGTCCTG...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCCACAGAAGGCTCCGCTaGACTTTCAGTCATACTGAT +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPHRRLR*TFSHTD
Trigger: ATCAGTATGACTGAAAGTCCAGCGGAGCCTTCTGTG...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR GCA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCGCAAAAGGTCGGCTATaGTGTCAACATAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPAKGRL*CQHRSQ
Trigger: CTGACTTCTATGTTGACAGCATAGCCGACCTTTTGC...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR GCA 90 bp GAAGGCTCCGCTGGACTTTCAGTCATACTGATGGGGCTCTGGTCCATGCAAGCCAACAATGAATGCCTTTaGTTAACTCCAATTACACTC +
Preference number: 4 (lower is better)
Translates to: EGSAGLSVILMGLWSMQANNECL*LTPITL
Trigger: GAGTGTAATTGGAGTTAAGCAAAGGCATTCATTGTT...GGCTTGCATGGACCAGAGCCCCATCAGTATGACTGAAAGTCCAGCGGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR TCA 90 bp GTGGAATTTTGCAAGGTTAACAATGAATGCCTTTGCTTAACTCCAATTACACTCCGCCTCTTATTGCTCTaGAGTCTTTGTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: VEFCKVNNECLCLTPITLRLLLL*SLCDQV
Trigger: CACTTGGTCACAAAGACTTCAGAGCAATAAGAGGCG...GAGTGTAATTGGAGTTAAGCAAAGGCATTCATTGTTAACCTTGCAAAATTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562001.1
CDS GCA 90 bp TGGGCGCGGGGGCGCCGGCCAGGCGCTGGCGCAGGTAGAGCGCGGTaGAGTAGGCCGTGCCGAAGACCTCCAGGCTGGCGCCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: WARGRRPGAGAGRAR*SRPCRRPPGWRRAP
Trigger: CGGGGCCCGGCGCCAGCCTGGAGGTCTTCGGCACGGCCTACTGCACCGCGCTCTACCTGCGCCAGCGCCTGGCCGGCGCCCCCGCGCCCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS GCA 90 bp TCGGGCTCCAGCGGCGCGTGCAGCCAGTCGCCGGGACCCTCGCCCTaGAGTGGCTCGGGCCCCACGCCCACGCTGGCGACGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SGSSGACSQSPGPSP*SGSGPTPTLATPTA
Trigger: GGCCGTGGGCGTCGCCAGCGTGGGCGTGGGGCCCGAGCCACTGCAGGGCGAGGGTCCCGGCGACTGGCTGCACGCGCCGCTGGAGCCCGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 90 bp CCTCCAGCTCCGCGGCCAGGGCTGGGCTGCCCAGCACGTAGGCCTTaGGCGCGGGGGCGCCGGCCAGGCGCTGGCGCAGGTAGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: PPAPRPGLGCPARRP*ARGRRPGAGAGRAR
Trigger: CCGCGCTCTACCTGCGCCAGCGCCTGGCCGGCGCCCCCGCGCCCAAGGCCTACGTGCTGGGCAGCCCAGCCCTGGCCGCGGAGCTGGAGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 90 bp CTCCAGCGGCGCGTGCAGCCAGTCGCCGGGACCCTCGCCCTGCAGTaGCTCGGGCCCCACGCCCACGCTGGCGACGCCCACGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LQRRVQPVAGTLALQ*LGPHAHAGDAHGLQ
Trigger: CTGGAGGCCGTGGGCGTCGCCAGCGTGGGCGTGGGGCCCGAGCCACTGCAGGGCGAGGGTCCCGGCGACTGGCTGCACGCGCCGCTGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS GCA 90 bp TCAAAGCCCACCACCACCGCGCGCACGTCGGGCTCCAGCGGCGCGTaGAGCCAGTCGCCGGGACCCTCGCCCTGCAGTGGCTCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SKPTTTARTSGSSGA*SQSPGPSPCSGSGP
Trigger: GGGGCCCGAGCCACTGCAGGGCGAGGGTCCCGGCGACTGGCTGCACGCGCCGCTGGAGCCCGACGTGCGCGCGGTGGTGGTGGGCTTTGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp GCAGGAGAGGCTGGAGCCCCGCCCAGAACCTTGGCGAGCTGGTGGCCCTGCCAAATGAAGCCCAGGCGCTaGCCGCGGGCTCGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AGEAGAPPRTLASWWPCQMKPRR*PRARSA
Trigger: GGCGCTGCGAGCCCGCGGCAAGCGCCTGGGCTTCAT...TTGGCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGCTCCAGCCTCTCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 90 bp TCGAAAATGAAGCGGCTGGGCTTCCCGATGATGTCGGCCTGGCGCTaGGCGGCCATCTCCACGGCTCGGACCAGACACCCGGTACCCGCG +
Preference number: 5 (lower is better)
Translates to: SKMKRLGFPMMSAWR*AAISTARTRHPVPA
Trigger: CGCGGGTACCGGGTGTCTGGTCCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCCGACATCATCGGGAAGCCCAGCCGCTTCATTTTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 90 bp ACGCAGTCGAAAATGAAGCGGCTGGGCTTCCCGATGATGTCGGCCTaGCGCTGGGCGGCCATCTCCACGGCTCGGACCAGACACCCGGTA +
Preference number: 5 (lower is better)
Translates to: TQSKMKRLGFPMMSA*RWAAISTARTRHPV
Trigger: TACCGGGTGTCTGGTCCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCCGACATCATCGGGAAGCCCAGCCGCTTCATTTTCGACTGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 90 bp CGGTCTCCCACCATGACGGTGCGCTCGGGGTTGATGCCGTATTCCTaGGACACGCAGTCGAAAATGAAGCGGCTGGGCTTCCCGATGATG +
Preference number: 5 (lower is better)
Translates to: RSPTMTVRSGLMPYS*DTQSKMKRLGFPMM
Trigger: CATCATCGGGAAGCCCAGCCGCTTCATTTTCGACTGCGTGTCCCAGGAATACGGCATCAACCCCGAGCGCACCGTCATGGTGGGAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp GTCTGCTGTCAGGCCTGTGAAAGGTCAGCAGAGCCAAGGAGCAGGCAGGAGAGGGTCTTGCTGCTGTTGTaGGTGATGAAGCCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: VCCQACERSAEPRSRQERVLLLL*VMKPRR
Trigger: GCGCCTGGGCTTCATCACCAACAACAGCAGCAAGAC...CCTCTCCTGCCTGCTCCTTGGCTCTGCTGACCTTTCACAGGCCTGACAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AGACCCGGCTTGAGCCAACTTAGCCAAGCCAGCGTCAGTGTCACCAGCCTCATGTCAAGCGGAAGCCGGTaGTCCATGTTGGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: RPGLSQLSQASVSVTSLMSSGSR*SMLVPT
Trigger: CGTGGGCACCAACATGGACAACCGGCTTCCGCTTGA...CATGAGGCTGGTGACACTGACGCTGGCTTGGCTAAGTTGGCTCAAGCCGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCGCCCCGCCCAGAACCTaGGCGAGCTGGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSAPPRT*ASWWPC
Trigger: GCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGC...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CAA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCAAGCCGGTTGTCCATGTaGGTGCCCACGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPSRLSM*VPTSRQ
Trigger: CTGCCTGCTCGTGGGCACCAACATGGACAACCGGCT...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGACGGTGCGCTCGGGGTaGATGCCGTATTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SQCGFESLICALAPTVLQTVRSG*MPYSWD
Trigger: GTCCCAGGAATACGGCATCAACCCCGAGCGCACCGT...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp GCTGCAGGGCACAGAGGCTCCTTCAGTGGAATTTTGCCTACGACACAGAGCACACGGGTCTTGCTGCTGTaGTTGGTGATGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AAGHRGSFSGILPTTQSTRVLLL*LVMKPR
Trigger: CCTGGGCTTCATCACCAACAACAGCAGCAAGACCCG...TGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGAGCCTCTGTGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AAGGCGCTGGTAGGGAGCCAGCCAGAAGGTGCAGCATCCCGGGATGGCCCTGCTGCCCCACCTATTAATTaGGGTAACTGGTTTTCAATT +
Preference number: 5 (lower is better)
Translates to: KALVGSQPEGAASRDGPAAPPIN*GNWFSI
Trigger: AATTGAAAACCAGTTACCCAAATTAATAGGTGGGGC...AGCAGGGCCATCCCGGGATGCTGCACCTTCTGGCTGGCTCCCTACCAGCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CAA 90 bp GAAGGTGCAGCATCCCGGGATGGCCCTGCTGAGTCTGCTGTCAGGCCTGTGAAACTCCAATTACACTCTTaGAAGCCACTTAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: EGAASRDGPAESAVRPVKLQLHS*KPLSRA
Trigger: TGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGAG...TTTCACAGGCCTGACAGCAGACTCAGCAGGGCCATCCCGGGATGCTGCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CAA 90 bp TTAGCCGAGCAGATGCTTAAGCCCCACCTATTAATTTGGGTAACTGGTTTTCAAGCCCCGCCCAGAACCTaGGCGAGCTGGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LAEQMLKPHLLIWVTGFQAPPRT*ASWWPC
Trigger: GCAGGGCCACCAGCTCGCCAAGGTTCTGGGCGGGGC...TTGAAAACCAGTTACCCAAATTAATAGGTGGGGCTTAAGCATCTGCTCGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CAA 90 bp GACTGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCCAGGCCAGACCCGGCTaGAGCCAACTTAGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: DWMLCKGLPVLGDITLVPQARPG*SQLSQA
Trigger: GGCTTGGCTAAGTTGGCTCAAGCCGGGTCTGGCCTG...GGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AGACCCGGCTTGAGCCAACTTAGCCAAGCCAGCGTCAGTGTCACCAGCCTCATGTCCTTCAGTGGAATTTaGCCTACGACACAGAGCACA +
Preference number: 5 (lower is better)
Translates to: RPGLSQLSQASVSVTSLMSFSGI*PTTQST
Trigger: TGTGCTCTGTGTCGTAGGCAAAATTCCACTGAAGGA...CATGAGGCTGGTGACACTGACGCTGGCTTGGCTAAGTTGGCTCAAGCCGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGAGTTACCCATCTACTTaGAGTCCTCCCACCCGTGGT +
Preference number: 5 (lower is better)
Translates to: SQCGFESLICALAPTVLQSYPST*SPPTRG
Trigger: ACCACGGGTGGGAGGACTCAAAGTAGATGGGTAACT...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AGCCAGTGTGGGTTTGAGAGTTTAATCTGTGCTCTGGCGCCCACAGTGCTGCAGATTCCAGCTCTGGAGTaGGAACCCCAGTTACCCATC +
Preference number: 5 (lower is better)
Translates to: SQCGFESLICALAPTVLQIPALE*EPQLPI
Trigger: GATGGGTAACTGGGGTTCCAACTCCAGAGCTGGAAT...CTGCAGCACTGTGGGCGCCAGAGCACAGATTAAACTCTCAAACCCACACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp TGGATGCTTTGTAAAGGACTTCCTGTTCTTGGGGACATAACTCTCGTCCCCTCCGCTGGGAGTGGGCAGTaGGCATTCCAGCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: WMLCKGLPVLGDITLVPSAGSGQ*AFQLWS
Trigger: ACTCCAGAGCTGGAATGCCAACTGCCCACTCCCAGC...GGAGGGGACGAGAGTTATGTCCCCAAGAACAGGAAGTCCTTTACAAAGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp AGACCCGGCTTGAGCCAACTTAGCCAAGCCAGCGTCAGTGTCACCAGCCTCATGACTCAATCTTTAACCTaGAAGGGCAGGCAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: RPGLSQLSQASVSVTSLMTQSLT*KGRQKV
Trigger: GACCTTTTGCCTGCCCTTCAAGGTTAAAGATTGAGT...CATGAGGCTGGTGACACTGACGCTGGCTTGGCTAAGTTGGCTCAAGCCGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp GAAGGCTCCGCTGGACTTTCAGTCATACTGATGGGGCTCTGGTCCATGCAAGCCCTCCAATTACACTCTTaGAAGCCACTTAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: EGSAGLSVILMGLWSMQALQLHS*KPLSRA
Trigger: TGCTCGGCTAAGTGGCTTCAAAGAGTGTAATTGGAG...GGCTTGCATGGACCAGAGCCCCATCAGTATGACTGAAAGTCCAGCGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp GTCTTTGTGACCAAGTGGAGTGCTGTGACTGTGGGGCCAAGAGAGAAGCTGCCAGCCCCACCTATTAATTaGGGTAACTGGTTTTCAATT +
Preference number: 5 (lower is better)
Translates to: VFVTKWSAVTVGPREKLPAPPIN*GNWFSI
Trigger: AATTGAAAACCAGTTACCCAAATTAATAGGTGGGGC...TGGCAGCTTCTCTCTTGGCCCCACAGTCACAGCACTCCACTTGGTCACAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1
CDS-3UTR CAA 90 bp TTAGCCGAGCAGATGCTTAAGCCCCACCTATTAATTTGGGTAACTGGTTTTCAATGGGTTTTCACCATTTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LAEQMLKPHLLIWVTGFQWVFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAAATGGTGAAAACCCA...TTGAAAACCAGTTACCCAAATTAATAGGTGGGGCTTAAGCATCTGCTCGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS-3UTR CAA 90 bp GTGGAATTTTGCAAGGTTAACAATGAATGCCTTTGCTTAACTCCAATTACACTCACTCAATCTTTAACCTaGAAGGGCAGGCAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: VEFCKVNNECLCLTPITLTQSLT*KGRQKV
Trigger: GACCTTTTGCCTGCCCTTCAAGGTTAAAGATTGAGT...GAGTGTAATTGGAGTTAAGCAAAGGCATTCATTGTTAACCTTGCAAAATTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562001.1
CDS GCA 72 bp AGCGGCGCGTGCAGCCAGTCGCCGGGACCCTCGCCCTaGAGTGGCTCGGGCCCCACGCCCACGCTGGCGACG +
Preference number: 6 (lower is better)
Translates to: SGACSQSPGPSP*SGSGPTPTLAT
Trigger: CGTCGCCAGCGTGGGCGTGGGGCCCGAGCCACTGCAGGGCGAGGGTCCCGGCGACTGGCTGCACGCGCCGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 72 bp CGCGTGCAGCCAGTCGCCGGGACCCTCGCCCTGCAGTaGCTCGGGCCCCACGCCCACGCTGGCGACGCCCAC +
Preference number: 6 (lower is better)
Translates to: RVQPVAGTLALQ*LGPHAHAGDAH
Trigger: GTGGGCGTCGCCAGCGTGGGCGTGGGGCCCGAGCCACTGCAGGGCGAGGGTCCCGGCGACTGGCTGCACGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS GCA 72 bp GGCGCTGGCGCAGGTAGAGCGCGGTGCAGTAGGCCGTaGCGAAGACCTCCAGGCTGGCGCCGGGCCCCGCGG +
Preference number: 6 (lower is better)
Translates to: GAGAGRARCSRP*RRPPGWRRAPR
Trigger: CCGCGGGGCCCGGCGCCAGCCTGGAGGTCTTCGGCACGGCCTACTGCACCGCGCTCTACCTGCGCCAGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS GCA 72 bp ACCACCACCGCGCGCACGTCGGGCTCCAGCGGCGCGTaGAGCCAGTCGCCGGGACCCTCGCCCTGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: TTTARTSGSSGA*SQSPGPSPCSG
Trigger: GCCACTGCAGGGCGAGGGTCCCGGCGACTGGCTGCACGCGCCGCTGGAGCCCGACGTGCGCGCGGTGGTGGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 72 bp AAGCGGCTGGGCTTCCCGATGATGTCGGCCTGGCGCTaGGCGGCCATCTCCACGGCTCGGACCAGACACCCG +
Preference number: 6 (lower is better)
Translates to: KRLGFPMMSAWR*AAISTARTRHP
Trigger: CGGGTGTCTGGTCCGAGCCGTGGAGATGGCCGCCCAGCGCCAGGCCGACATCATCGGGAAGCCCAGCCGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CAA 90 bp CACCCGGTACCCGCGATGAAGCGGCCGTTCTCAAGCGGAAGCCGGTaGTCCATGTTGGTGCCCACGAGCAGGCAGCCGGGCTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: HPVPAMKRPFSSGSR*SMLVPTSRQPGCCR
Trigger: CCTGCAGCAGCCCGGCTGCCTGCTCGTGGGCACCAACATGGACAACCGGCTTCCGCTTGAGAACGGCCGCTTCATCGCGGGTACCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CAA 72 bp CCCGCGATGAAGCGGCCGTTCTCAAGCGGAAGCCGGTaGTCCATGTTGGTGCCCACGAGCAGGCAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: PAMKRPFSSGSR*SMLVPTSRQPG
Trigger: GCCCGGCTGCCTGCTCGTGGGCACCAACATGGACAACCGGCTTCCGCTTGAGAACGGCCGCTTCATCGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 72 bp AGCGGCCGTTCTCAAGCGGAAGCCGGTTGTCCATGTTaGTGCCCACGAGCAGGCAGCCGGGCTGCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: SGRSQAEAGCPC*CPRAGSRAAAG
Trigger: ACCTGCAGCAGCCCGGCTGCCTGCTCGTGGGCACCAACATGGACAACCGGCTTCCGCTTGAGAACGGCCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CAA 72 bp AAGCGGCCGTTCTCAAGCGGAAGCCGGTTGTCCATGTaGGTGCCCACGAGCAGGCAGCCGGGCTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: KRPFSSGSRLSM*VPTSRQPGCCR
Trigger: CCTGCAGCAGCCCGGCTGCCTGCTCGTGGGCACCAACATGGACAACCGGCTTCCGCTTGAGAACGGCCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS CCA 72 bp ACCATGACGGTGCGCTCGGGGTTGATGCCGTATTCCTaGGACACGCAGTCGAAAATGAAGCGGCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: TMTVRSGLMPYS*DTQSKMKRLGF
Trigger: GAAGCCCAGCCGCTTCATTTTCGACTGCGTGTCCCAGGAATACGGCATCAACCCCGAGCGCACCGTCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333503.8
CDS GCA 72 bp ATCTTTAACCTTGAAGGGCAGGCAAAAGGTCGGCTATaGTGTCAACATAGAAGTCAGGGACCATTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: IFNLEGQAKGRL*CQHRSQGPFSS
Trigger: AGAAGAAAATGGTCCCTGACTTCTATGTTGACAGCATAGCCGACCTTTTGCCTGCCCTTCAAGGTTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333503.8
ENST00000562001.1