Pregenerated sensors for PGM5 (Homo sapiens)
Ensembl gene IDs: ENSG00000154330Ensembl transcript IDs: ENST00000396392.5, ENST00000396396.6, ENST00000472639.1, ENST00000496758.1, ENST00000587852.2, ENST00000604870.6
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTaGGTGTCCTGGCTGAGTACAGAGGAGGCTGCTAGACCGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: AVPKEAKQTQTGPTR*VSWLSTEEAARPAV Trigger: TACTGCCGGTCTAGCAGCCTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 90 bp | AAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTaGGTACAGAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: KQNRHKQVPRAGCPG*VQRRLLDRQYPFPK Trigger: CTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 90 bp | GGGAGGCAGGGCCATCGGGTGGGTGGCAGGAGTGAGGTGGGCTGTTaGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTA | + |
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Preference number: 1 (lower is better) Translates to: GRQGHRVGGRSEVGC*EFYNKTFPHCRPDL Trigger: TAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCCTGCCACCCACCCGATGGCCCTGCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 90 bp | AAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTaGCTGAGTACAGAGGAGGCTGCTAGACCGGCAGTACCCTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: KEAKQTQTGPTRWVS*LSTEEAARPAVPFS Trigger: GGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 90 bp | AACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGGGTGAGTaGCTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: NSQSAPGHFRKWQGE*LCRSQGSKTDTNRS Trigger: GGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 90 bp | GAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTAGGATaGAAAGATAAACCCTCCTCCATGCTGGGAGTGTCTCCTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: EFYNKTFPHCRPDLG*KDKPSSMLGVSPSA Trigger: GGCAGAAGGAGACACTCCCAGCATGGAGGAGGGTTTATCTTTTCATCCTAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR GCA 90 bp | AATGTTTCCTTGCTTGCACTAACCTTGACTACAGCAATAACGCATTaGTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: NVSLLALTLTTAITH*LTVKVHQVISANGR Trigger: CCTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAAGGAAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 90 bp | AGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCCCCTATTaGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSEMCPNKCIKIGPY*PSQRALTHGGLFAF Trigger: GAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATAGGGGCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR GCA 90 bp | CTTTTGCAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTaGATTAAGATAGGCCCCTATTGGCCAAGTCAAAGAGCTCTCACA | + |
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Preference number: 1 (lower is better) Translates to: LLQPLQIRSEMCPNK*IKIGPYWPSQRALT Trigger: TGTGAGAGCTCTTTGACTTGGCCAATAGGGGCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTGCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 90 bp | AGAGGAAAACACCTATTGATATATTTTGTTGGAAGTGCACCATTGTaGTTTGTACAAAGCTTTAGAAGATGTGAGAGAAGGTGGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: RGKHLLIYFVGSAPL*FVQSFRRCERRWYR Trigger: CCTGTACCACCTTCTCTCACATCTTCTAAAGCTTTGTACAAATCACAATGGTGCACTTCCAACAAAATATATCAATAGGTGTTTTCCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTCTGCCCAGGGGCACCTaGGACTTAGGGTCAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: AARPAVPFSQVRKASCDTLPRGT*DLGSVS Trigger: TGAAACTGACCCTAAGTCCCAGGTGCCCCTGGGCAG...AGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTATAAACCCTCCTCCATaGTGGGAGTGTCTCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCRSQGSKTDTNRSHALGINPPP*WECLLL Trigger: CAGAAGGAGACACTCCCAGCATGGAGGAGGGTTTAT...ACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR GCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGCCAGCTGTGACACTCTaGTTGCCGGCAGGGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: NNALLNSQSAPGHFRKWQPAVTL*LPAGVP Trigger: GGGGACCCCTGCCGGCAAGCAGAGTGTCACAGCTGG...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTAAGATAGGCCCCTATTaGCCAAGTCAAAGAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EEAARPAVPFSQVRKASCKIGPY*PSQRAL Trigger: GAGAGCTCTTTGACTTGGCCAATAGGGGCCTATCTT...ACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGTCATTTCCGCAAATGGCAGGGTGAGTGACTGTGCCGTTCCCAAGGAAGCAAGACCTGACCTAGGATaGAAAGATAAACCCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QVISANGRVSDCAVPKEARPDLG*KDKPSS Trigger: GGAGGAGGGTTTATCTTTTCATCCTAGGTCAGGTCT...TGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTCTGCTTGCCGGCGTTGTGATTAACAGCTaGCTAGCCCAGTTGTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: AVPFSQVRKASCDTLLAGVVINS*LAQLLS Trigger: TGACAACAACTGGGCTAGGCAGCTGTTAATCACAAC...GCCGGCAAGCAGAGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTAGGCCCTGCTGCATTTaGAGGAATAGGACAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: AARPAVPFSQVRKASCDTRPCCI*RNRTKP Trigger: TGGTTTTGTCCTATTCCTCCAAATGCAGCAGGGCCT...AGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR TCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGGAGGAAAGCCAGCTGTaGCACTCTGCTTGCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NNALLNSQSAPGHFRKWQEESQL*HSACRQ Trigger: CTGCCGGCAAGCAGAGTGTCACAGCTGGCTTTCCTC...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTACATGGTGGTCTTTTTaGCTTCTCAAGAGGAACTTG | + |
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Preference number: 2 (lower is better) Translates to: EEAARPAVPFSQVRKASCTWWSF*LLKRNL Trigger: CAAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGT...ACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | GACTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGAGTGAGGTGGGCTGTTaGGAGTTCTATAATAAAACC | + |
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Preference number: 2 (lower is better) Translates to: DCAVPKEAKQTQTGPTRWSEVGC*EFYNKT Trigger: GGTTTTATTATAGAACTCCCAACAGCCCACCTCACT...CCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR TCA 90 bp | GACTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGTCCCAACTTTACAACTaGATGGCTGAATTTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: DCAVPKEAKQTQTGPTRWSQLYN*MAEFER Trigger: TCTTTCAAATTCAGCCATTCAGTTGTAAAGTTGGGA...CCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAAACCCTCCTCCATGCTaGGAGTGTCTCCTTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: YWPSQRALTHGGLFAFSRNPPPC*ECLLLP Trigger: AGGCAGAAGGAGACACTCCCAGCATGGAGGAGGGTT...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGTGGCAGGAGTGAGGTaGGCTGTTGGGAGTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: YWPSQRALTHGGLFAFSRVAGVR*AVGSSI Trigger: TATAGAACTCCCAACAGCCCACCTCACTCCTGCCAC...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTGGAAGTGCACCATTGTaGTTTGTACAAAGCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLGSAPL*FVQSFR Trigger: TCTAAAGCTTTGTACAAATCACAATGGTGCACTTCC...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTATGTGTCCAAACAAGTaGATTAAGATAGGCCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLMCPNK*IKIGPY Trigger: ATAGGGGCCTATCTTAATGCACTTGTTTGGACACAT...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CAA 90 bp | GAATGTTTCCTTGCTTGCACTAACCTTGACTACAGCAATAACGCATaGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ECFLACTNLDYSNNA*LNSQSAPGHFRKWQ Trigger: CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAAGGAAACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CAA 90 bp | GGAAACAAATACCTTACTGGGAATGTTTCCTTGCTTGCACTAACCTaGACTACAGCAATAACGCATTGCTTAACAGTCAAAGTGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GNKYLTGNVSLLALT*TTAITHCLTVKVHQ Trigger: CTGGTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAAGGAAACATTCCCAGTAAGGTATTTGTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CCA 90 bp | GAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGAGATTGGAACTAGGCTCATCAGCAGATTaGACACAGCTAAGGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: EIKQSAEPKSEMNQRLELGSSAD*TQLRKE Trigger: TTCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCC...TAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| 3UTR-3UTR TCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGATGTACCAACATACTTaGTGTAATCAAGGAAGGATC | + |
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Preference number: 2 (lower is better) Translates to: NNALLNSQSAPGHFRKWQMYQHT*CNQGRI Trigger: GATCCTTCCTTGATTACATCAAGTATGTTGGTACAT...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CAA 90 bp | GAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGAGATaGGAACTATCAGACAGGGTGTTTAAAACAACCATGTCTAATATG | + |
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Preference number: 2 (lower is better) Translates to: EIKQSAEPKSEMNQR*ELSDRVFKTTMSNM Trigger: CATATTAGACATGGTTGTTTTAAACACCCTGTCTGATAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCCTCACTTGGCACAAGTaGTGCACAAATGTTGTGATT | + |
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Preference number: 2 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGLTWHK*CTNVVI Trigger: AATCACAACATTTGTGCATCACTTGTGCCAAGTGAG...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 72 bp | AGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTaGGTACAGAGGAGGCTGCTAGACCGGCAGTACCCT | + |
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Preference number: 3 (lower is better) Translates to: RHKQVPRAGCPG*VQRRLLDRQYP Trigger: AGGGTACTGCCGGTCTAGCAGCCTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 72 bp | GGAGGCAGGGCCATCGGGTGGGTGGCAGGAGTGAGGTaGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: GGRAIGWVAGVR*AVGSSIIKPSP Trigger: GGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCCTGCCACCCACCCGATGGCCCTGCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 72 bp | AGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTaGGGAAAGCCAGCTGTGACACTCTGCTTGCCGGCA | + |
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Preference number: 3 (lower is better) Translates to: RRLLDRQYPFPK*GKPAVTLCLPA Trigger: TGCCGGCAAGCAGAGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 72 bp | AAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTaGCTGAGTACAGAGGAGGCTGCTAGACCGGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: KQTQTGPTRWVS*LSTEEAARPAV Trigger: TACTGCCGGTCTAGCAGCCTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 72 bp | GGCCATCGGGTGGGTGGCAGGAGTGAGGTGGGCTGTTaGGAGTTCTATAATAAAACCTTCCCCCATTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: GHRVGGRSEVGC*EFYNKTFPHCR Trigger: TCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCCTGCCACCCACCCGATGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 72 bp | AGTGCACCAGGTCATTTCCGCAAATGGCAGGGTGAGTaGCTGTGCCGTTCCCAAGGAAGCAAAACAGACACA | + |
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Preference number: 3 (lower is better) Translates to: SAPGHFRKWQGE*LCRSQGSKTDT Trigger: TGTGTCTGTTTTGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTGGTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTCACATGGTGGTCTTTTaGCCTTCTCAAGAGGAACTT | + |
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Preference number: 3 (lower is better) Translates to: EEAARPAVPFSQVRKASCHMVVF*PSQEEL Trigger: AAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGTG...ACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR TCA 72 bp | TCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGGGTaGGTGACTGTGCCGTTCCCAAGGAAGCAAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: SKCTRSFPQMAG*VTVPFPRKQNR Trigger: TCTGTTTTGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTGGTGCACTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CAA 90 bp | CAGGTCATTTCCGCAAATGGCAGGGTGAGTGACTGTGCCGTTCCCAAGGAAGCACTTCTCAAGAGGAACTaGTATAAACCCATGTACCAA | + |
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Preference number: 3 (lower is better) Translates to: QVISANGRVSDCAVPKEALLKRN*YKPMYQ Trigger: TTGGTACATGGGTTTATACAAGTTCCTCTTGAGAAG...TGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CAA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAAGCTGCCTAGCCCAGTaGTTGTCAAAAGGGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: YWPSQRALTHGGLFAFSRSCLAQ*LSKGEV Trigger: AACCTCCCCTTTTGACAACAACTGGGCTAGGCAGCT...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTGTGCACCATTGTGATTaGTACAAAGCTTTAGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: AARPAVPFSQVRKASCDTVHHCD*YKALED Trigger: ATCTTCTAAAGCTTTGTACAAATCACAATGGTGCAC...AGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR CCA 72 bp | ATGTGTCCAAACAAGTGCATTAAGATAGGCCCCTATTaGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: MCPNKCIKIGPY*PSQRALTHGGL Trigger: AAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATAGGGGCCTATCTTAATGCACTTGTTTGGACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR GCA 72 bp | TTGCTTGCACTAACCTTGACTACAGCAATAACGCATTaGTTAACAGTCAAAGTGCACCAGGTCATTTCCGCA | + |
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Preference number: 3 (lower is better) Translates to: LLALTLTTAITH*LTVKVHQVISA Trigger: TGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTAGGAAGAACATTTTCTCACTaGGCACAAGTGATGCACAAA | + |
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Preference number: 3 (lower is better) Translates to: GCWEFYNKTFPHCRPDLGRTFSH*AQVMHK Trigger: TTTGTGCATCACTTGTGCCAAGTGAGAAAATGTTCT...TCCTAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| 3UTR-3UTR CAA 90 bp | CAGAGATTGGAACTATCAGACAGGGTGTTTAAAACAACCATGTCTAATATGTTAAGGCTCATCAGCAGATaGGACACAGCTAAGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: QRLELSDRVFKTTMSNMLRLISR*DTAKER Trigger: TCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCCT...TAACATATTAGACATGGTTGTTTTAAACACCCTGTCTGATAGTTCCAATCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| 3UTR TCA 72 bp | AAACCCAAACCATTGTCAAGAGATAAAGCAATCAGCTaGACCAAAGTCAGAGATGAACCAGAGATTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: KPKPLSRDKAIS*TKVRDEPEIGT Trigger: AGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTCTTGACAATGGTTTGGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| 3UTR GCA 72 bp | TGGAAACAAATACCTTACTGGGAATGTTTCCTTGCTTaGACTAACCTTGACTACAGCAATAACGCATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: WKQIPYWECFLA*TNLDYSNNALL Trigger: AAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAAGGAAACATTCCCAGTAAGGTATTTGTTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| 3UTR CCA 72 bp | AGAAGAAGAATTCCTTCAACAGGCTCATCAGCAGATTaGACACAGCTAAGGAAAGAATCAGTGAACTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRRIPSTGSSAD*TQLRKESVNLK Trigger: CTTTAAGTTCACTGATTCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCCTGTTGAAGGAATTCTTCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| 3UTR GCA 72 bp | CCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTaGATTAAGATAGGCCCCTATTGGCCAAGTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLQIRSEMCPNK*IKIGPYWPSQR Trigger: TCTTTGACTTGGCCAATAGGGGCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAAGAAGGCATCAGTGAAGCATCTCCCGCTGAGCACTCTCTTTGGCCCTCCAGCTGTGACACTCTaGTTGCCGGCAGGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSKKASVKHLPLSTLFGPPAVTL*LPAGVP Trigger: GGGGACCCCTGCCGGCAAGCAGAGTGTCACAGCTGG...AGGGCCAAAGAGAGTGCTCAGCGGGAGATGCTTCACTGATGCCTTCTTGCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTTGTGGCTCCTGGTCATaGCCGCTGGGATCCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AARPAVPFSQVRKASCDTCGSWS*PLGSLS Trigger: CGAGAGGGATCCCAGCGGCCATGACCAGGAGCCACA...AGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTCCTGGTCATGGCCGCTaGGATCCCTCTCGTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AARPAVPFSQVRKASCDTPGHGR*DPSRSS Trigger: AGAGCTACGAGAGGGATCCCAGCGGCCATGACCAGG...AGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAAGAAGGCATCAGTGAAGCATCTCCCGCTGAGCACTCTCTTTGGCCCTACGCGCTGGGTGTCCTaGCTGAGTACAGAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKKASVKHLPLSTLFGPTRWVS*LSTEEA Trigger: AGCCTCCTCTGTACTCAGCCAGGACACCCAGCGCGT...AGGGCCAAAGAGAGTGCTCAGCGGGAGATGCTTCACTGATGCCTTCTTGCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CAGGTCATTTCCGCAAATGGCAGGGTGAGTGACTGTGCCGTTCCCAAGGAAGCATCAGTGCGATGGCTATaGGAGGGCTCAGCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVISANGRVSDCAVPKEASVRWL*EGSALP Trigger: AGGCAGTGCTGAGCCCTCTCATAGCCATCGCACTGA...TGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | CAGGTCATTTCCGCAAATGGCAGGGTGAGTGACTGTGCCGTTCCCAAGGAAGCATCCTTCTCTCGGAGGTaGTCAGAGCCAGTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVISANGRVSDCAVPKEASFSRR*SEPVPK Trigger: CTTTGGCACTGGCTCTGACCACCTCCGAGAGAAGGA...TGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTCCGGAAGATGAGCCGTaGTGCATCCGAGAAAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRSQGSKTDTNRSHALGPEDEP*CIREND Trigger: ATCATTTTCTCGGATGCATCACGGCTCATCTTCCGG...ACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTCCGCAAATGGCAGGGTaGGTGACTGTGCCGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLPQMAG*VTVPFP Trigger: TGGGAACGGCACAGTCACTCACCCTGCCATTTGCGG...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GACTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGGTCCCATAACTCCGTaGATTGCGTCAATGCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DCAVPKEAKQTQTGPTRWGPITP*IASMRI Trigger: GATTCGCATTGACGCAATGCACGGAGTTATGGGACC...CCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAAGAAGGCATCAGTGAAGCATCTCCCGCTGAGCACTCTCTTTGGCCCTGTTTCTTGGTCACAGTaGCATCCACAGGGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GSKKASVKHLPLSTLFGPVSWSQ*HPQGPR Trigger: ACGTGGACCCTGTGGATGGCACTGTGACCAAGAAAC...AGGGCCAAAGAGAGTGCTCAGCGGGAGATGCTTCACTGATGCCTTCTTGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTGAGAGGGCTCAGCACTaGCTGTGGCTCCTGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLERAQH*LWLLVM Trigger: CATGACCAGGAGCCACAGGCAGTGCTGAGCCCTCTC...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTATAAACCCTCCTCCATaGTGGGAGTGTCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAARPAVPFSQVRKASCINPPP*WECLLL Trigger: CAGAAGGAGACACTCCCAGCATGGAGGAGGGTTTAT...ACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | AAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTGAGTACAGAGGAGATTTCCTCCACACTCTaGTTCCGGGCAGCAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: KQTQTGPTRWVSWLSTEEISSTL*FRAAIM Trigger: CATTATTGCTGCCCGGAAGCAGAGTGTGGAGGAAAT...CTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTCCTCATAGTCAAACCTaGAATAGTAGTGGCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEAARPAVPFSQVRKASCPHSQT*NSSGGQ Trigger: TTGGCCGCCACTACTATTGCAGGTTTGACTATGAGG...ACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | AAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTGAGTACAGAGGAGAGGCCCTGCTGCATTTaGAGGAATAGGACAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTQTGPTRWVSWLSTEERPCCI*RNRTKP Trigger: TGGTTTTGTCCTATTCCTCCAAATGCAGCAGGGCCT...CTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTAGATGTGAGAGAAGGTaGTACAGGGATGTTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRSQGSKTDTNRSHALGRCERR*YRDVGD Trigger: ATCCCCAACATCCCTGTACCACCTTCTCTCACATCT...ACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTAAGATAGGCCCCTATTaGCCAAGTCAAAGAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCRSQGSKTDTNRSHALGKIGPY*PSQRAL Trigger: GAGAGCTCTTTGACTTGGCCAATAGGGGCCTATCTT...ACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | GGTAGCAAGAAGGCATCAGTGAAGCATCTCCCGCTGAGCACTCTCTTTGGCCCTAGACCTGACCTAGGATaGAAAGATAAACCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSKKASVKHLPLSTLFGPRPDLG*KDKPSS Trigger: GGAGGAGGGTTTATCTTTTCATCCTAGGTCAGGTCT...AGGGCCAAAGAGAGTGCTCAGCGGGAGATGCTTCACTGATGCCTTCTTGCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTAAATGGCAGGGTGAGTaGCTGTGCCGTTCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLKWQGE*LCRSQG Trigger: TCCTTGGGAACGGCACAGTCACTCACCCTGCCATTT...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GGAGTGAGGTGGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCCTCTCGTAGCTCTCTaGGTACAGTCTGAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRWAVGSSIIKPSPIVDPLVAL*VQSEGG Trigger: GCCACCCTCAGACTGTACGCAGAGAGCTACGAGAGG...GTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGCTCAGCACTGCCTGTaGCTCCTGGTCATGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YWPSQRALTHGGLFAFSRAQHCL*LLVMAA Trigger: AGCGGCCATGACCAGGAGCCACAGGCAGTGCTGAGC...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | AAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTGAGTACAGAGGAGAAGAGCTCTCACACATaGTGGTCTTTTTGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQTQTGPTRWVSWLSTEEKSSHT*WSFCLL Trigger: GAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTT...CTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTGTTGTGATTAACAGCTaGCTAGCCCAGTTGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AARPAVPFSQVRKASCDTVVINS*LAQLLS Trigger: TGACAACAACTGGGCTAGGCAGCTGTTAATCACAAC...AGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCTGCTAGACCGGCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTACAGCAATAACGCATTaGTTAACAGTCAAAGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EEAARPAVPFSQVRKASCTAITH*LTVKVH Trigger: GTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGT...ACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGCCGGTCTAGCAGCCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GGAGTGAGGTGGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACAGTGGCGGCCAAATTTaGCCCAGTGATCTCGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GVRWAVGSSIIKPSPIVDSGGQI*PSDLGQ Trigger: TTGTCCGAGATCACTGGGCCAAATTTGGCCGCCACT...GTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTAGGAGGACCTTCATTGATTTaGCCACTCTGTCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCWEFYNKTFPHCRPDLGGPSLI*PLCPGP Trigger: TGGCCCTGGACAGAGTGGCCAAATCAATGAAGGTCC...TCCTAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTATGCATCCGAGAAAATaGTCCTTAGGCCCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLMHPRK*SLGPVS Trigger: AGAAACAGGGCCTAAGGATCATTTTCTCGGATGCAT...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCTCTCTGCGTACAGTCTaGGGGTGGCCCGCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGSLRTV*GWPAHH Trigger: GTGGTGTGCGGGCCACCCTCAGACTGTACGCAGAGA...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CAGGTCATTTCCGCAAATGGCAGGGTGAGTGACTGTGCCGTTCCCAAGGAAGCATCCCAACTTTACAACTaGATGGCTGAATTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVISANGRVSDCAVPKEASQLYN*MAEFER Trigger: TCTTTCAAATTCAGCCATTCAGTTGTAAAGTTGGGA...TGCTTCCTTGGGAACGGCACAGTCACTCACCCTGCCATTTGCGGAAATGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTAGGACTTCCCCACACAGATTaGAACGTCCTGAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GCWEFYNKTFPHCRPDLGLPHTD*NVLSPS Trigger: TGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAG...TCCTAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GCTGAACCAAAGTCAGAGATGAACCAGAGATTGGAACTATCAGACAGGGTGTTTGGACCTTCATTGATTTaGCCACTCTGTCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEPKSEMNQRLELSDRVFGPSLI*PLCPGP Trigger: TGGCCCTGGACAGAGTGGCCAAATCAATGAAGGTCC...AAACACCCTGTCTGATAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCACTAACCTTGACTACAGCAATAACGCATTGCTTAACAGTCAAAGTGCACAACCCTCCTCCATGCTaGGAGTGTCTCCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALTLTTAITHCLTVKVHNPPPC*ECLLLP Trigger: AGGCAGAAGGAGACACTCCCAGCATGGAGGAGGGTT...GTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGGAACTTGTGTGGCAGGAGTGAGGTaGGCTGTTGGGAGTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SQRALTHGGLFAFSRGTCVAGVR*AVGSSI Trigger: TATAGAACTCCCAACAGCCCACCTCACTCCTGCCAC...ACAAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGATACAGGGACCTTCATTaGTTTGGCCACTCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YWPSQRALTHGGLFAFSRYRDLH*FGHSVQ Trigger: CTGGACAGAGTGGCCAAATCAATGAAGGTCCCTGTA...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGCCAAATTTGGCCCAGTaGTCTCGGACAATTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNALLNSQSAPGHFRKWQPNLAQ*SRTISS Trigger: GGAGGAAATTGTCCGAGATCACTGGGCCAAATTTGG...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | GGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTAGGATCTCTTTGGCCCTGGTaGGTGATCTTTCCTCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GCWEFYNKTFPHCRPDLGSLWPW*VIFPLF Trigger: GAATAGAGGAAAGATCACTCACCAGGGCCAAAGAGA...TCCTAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCGAGGAAAGCCAGCTGTaGCACTCTGCTTGCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGEESQL*HSACRQ Trigger: CTGCCGGCAAGCAGAGTGTCACAGCTGGCTTTCCTC...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | GGAGTGAGGTGGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACGTCCTAGCAAGTTTCTaGCAGAAGCACAGACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVRWAVGSSIIKPSPIVDVLASF*QKHRQK Trigger: TTTCTGTCTGTGCTTCTGTCAGAAACTTGCTAGGAC...GTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCACCATCTGGCCCATAGCTGTACCACCAATTACATTTTCTTCCAGCTTGAATGTTTCCTTGCTTaGACTAACCTTGACTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHHLAHSCTTNYIFFQLECFLA*TNLDYS Trigger: GCTGTAGTCAAGGTTAGTGCAAGCAAGGAAACATTC...AAGCTGGAAGAAAATGTAATTGGTGGTACAGCTATGGGCCAGATGGTGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | GCTGAACCAAAGTCAGAGATGAACCAGAGATTGGAACTATCAGACAGGGTGTTTGAATCTCCATCCAGCTaGGGTCTCATATACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AEPKSEMNQRLELSDRVFESPSS*GLIYRD Trigger: GTCCCTGTATATGAGACCCCAGCTGGATGGAGATTC...AAACACCCTGTCTGATAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCACAGGTCCCACGCGCTaGGTGTCCTGGCTGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGTGPTR*VSWLST Trigger: TGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGT...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | AGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGGAACTTGTCCTCCAGGTCCCTCATaGTATAATATGTCGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQRALTHGGLFAFSRGTCPPGPS*YNMSSW Trigger: CCAAGACGACATATTATATCATGAGGGACCTGGAGG...ACAAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GCTGAACCAAAGTCAGAGATGAACCAGAGATTGGAACTATCAGACAGGGTGTTTAGACGATCTAAACAGTaGCAAAGCTCTCTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AEPKSEMNQRLELSDRVFRRSKQ*QSSLPH Trigger: GTGGGGAAGAGAGCTTTGGCACTGTTTAGATCGTCT...AAACACCCTGTCTGATAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCGGTGGTCAGAGCCAGTaGCAAAGCTCTCTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGGGQSQ*QSSLPH Trigger: GTGGGGAAGAGAGCTTTGGCACTGGCTCTGACCACC...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGCTGGGATATTTTCAGTaGGATGGCTATGAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNALLNSQSAPGHFRKWQLGYFQ*DGYERA Trigger: AGCCCTCTCATAGCCATCGCACTGAAAATATCCCAG...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | GGAGTGAGGTGGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACACATGGTGGTCTTTTTaGCTTCTCAAGAGGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVRWAVGSSIIKPSPIVDTWWSF*LLKRNL Trigger: CAAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGT...GTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| 3UTR CAA 72 bp | CTTGCTTGCACTAACCTTGACTACAGCAATAACGCATaGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LACTNLDYSNNA*LNSQSAPGHFR Trigger: GCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | GAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGAGATTGGAACTATACAGGGACCTTCATTaGTTTGGCCACTCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EIKQSAEPKSEMNQRLELYRDLH*FGHSVQ Trigger: CTGGACAGAGTGGCCAAATCAATGAAGGTCCCTGTA...TAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR TCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGCGGCCAGTTCTCTCATaGATCTGGGATATTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNALLNSQSAPGHFRKWQRPVLS*IWDIFS Trigger: ACTGAAAATATCCCAGATTCATGAGAGAACTGGCCG...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | AACCATTGTCAAGAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGGGTCCCATAACTCCGTaGATTGCGTCAATGCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: NHCQEIKQSAEPKSEMNQGPITP*IASMRI Trigger: GATTCGCATTGACGCAATGCACGGAGTTATGGGACC...CTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTCTTGACAATGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR GCA 90 bp | AACCCAAACCATTGTCAAGAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGCTTCCCCACACAGATTaGAACGTCCTGAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NPNHCQEIKQSAEPKSEMLPHTD*NVLSPS Trigger: TGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAG...CATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTCTTGACAATGGTTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGAGTGAGGTGGGCTGTTaGGAGTTCTATAATAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: NNALLNSQSAPGHFRKWQSEVGC*EFYNKT Trigger: GGTTTTATTATAGAACTCCCAACAGCCCACCTCACT...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | GCTGAACCAAAGTCAGAGATGAACCAGAGATTGGAACTATCAGACAGGGTGTTTGATAAAGCAATCAGCTaGACCAAAGTCAGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AEPKSEMNQRLELSDRVFDKAIS*TKVRDE Trigger: TTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATC...AAACACCCTGTCTGATAGTTCCAATCTCTGGTTCATCTCTGACTTTGGTTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACCTGACCTAGGAATGTACCAACATACTTaGTGTAATCAAGGAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GCWEFYNKTFPHCRPDLGMYQHT*CNQGRI Trigger: GATCCTTCCTTGATTACATCAAGTATGTTGGTACAT...TCCTAGGTCAGGTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCTACCCTTTTCCCAAGTaGGGAAAGCCAGCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGYPFPK*GKPAVT Trigger: TGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTA...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCCTCCCCACAGCAAACTaGTGGCCAATGAAGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGLPTAN*WPMKDL Trigger: CAAATCCTTCATTGGCCAGCAGTTTGCTGTGGGGAG...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR GCA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGATGTGTCCAAACAAGTaGATTAAGATAGGCCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NNALLNSQSAPGHFRKWQMCPNK*IKIGPY Trigger: ATAGGGGCCTATCTTAATGCACTTGTTTGGACACAT...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCGAATCTCCATCCAGCTaGGGTCTCATATACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGESPSS*GLIYRD Trigger: GTCCCTGTATATGAGACCCCAGCTGGATGGAGATTC...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | TGTCAAGAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGAGATTGGGCTCATCAGCAGATTaGACACAGCTAAGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQEIKQSAEPKSEMNQRLGSSAD*TQLRKE Trigger: TTCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCC...CAATCTCTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTCTTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CCA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGATATAATATGTCGTCTTaGGATCCAACCCCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: YWPSQRALTHGGLFAFSRYNMSS*DPTPHS Trigger: ACTATGAGGGGTTGGATCCCAAGACGACATATTATA...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCCCCACAGCAAACTGCTaGCCAATGAAGGATTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGPTANC*PMKDLS Trigger: AGACAAATCCTTCATTGGCCAGCAGTTTGCTGTGGG...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| 3UTR CAA 72 bp | GAGAAGAAGAATTCCTTCAACAGGCTCATCAGCAGATaGGACACAGCTAAGGAAAGAATCAGTGAACTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKKNSFNRLISR*DTAKERISELK Trigger: TTTAAGTTCACTGATTCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCCTGTTGAAGGAATTCTTCTTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| 3UTR CAA 72 bp | TACCTTACTGGGAATGTTTCCTTGCTTGCACTAACCTaGACTACAGCAATAACGCATTGCTTAACAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLTGNVSLLALT*TTAITHCLTVK Trigger: TTTGACTGTTAAGCAATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAAGGAAACATTCCCAGTAAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCAAACAAATACCTTACTaGGAATGTTTCCTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGKQIPY*ECFLAC Trigger: GCAAGCAAGGAAACATTCCCAGTAAGGTATTTGTTT...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS GCA 90 bp | CTGTGGCTCCTGGTCATGGCCGCTGGGATCCCTCTCGTAGCTCTCTaGGTACAGTCTGAGGGTGGCCCGCACACCACTGGAGGAACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWLLVMAAGIPLVAL*VQSEGGPHTTGGTE Trigger: CTCAGTTCCTCCAGTGGTGTGCGGGCCACCCTCAGACTGTACGCAGAGAGCTACGAGAGGGATCCCAGCGGCCATGACCAGGAGCCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000496758.1 |
||
| CDS GCA 90 bp | CCCCAGCATGAGGTTAGGCTGCAGGTTCCTCTGCTGGCAAGGGAATaGTCCAGTGAAGTGCCCAGGGCTGGAGCCTCAGCTAGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQHEVRLQVPLLARE*SSEVPRAGASARLW Trigger: CCAGAGCCTAGCTGAGGCTCCAGCCCTGGGCACTTCACTGGAGCATTCCCTTGCCAGCAGAGGAACCTGCAGCCTAACCTCATGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496758.1 |
||
| CDS GCA 90 bp | GGGTCCCCTCCGGCCAGTTCTCTCATGAATCTGGGATATTTTCAGTaGGATGGCTATGAGAGGGCTCAGCACTGCCTGTGGCTCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPPASSLMNLGYFQ*DGYERAQHCLWLLV Trigger: GACCAGGAGCCACAGGCAGTGCTGAGCCCTCTCATAGCCATCGCACTGAAAATATCCCAGATTCATGAGAGAACTGGCCGGAGGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000496758.1 |
||
| CDS CCA 90 bp | GGTGTAAGAGCATGGGGTCTAGAAATCCTGCAGACACTTGCTACCTaGACCAGAAAGTCAGAGGCTCAGAGCCTGTCCAGGGCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVRAWGLEILQTLAT*TRKSEAQSLSRAML Trigger: CAGCATGGCCCTGGACAGGCTCTGAGCCTCTGACTTTCTGGTCCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604870.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCGTTCCCAAGGAAGCAAAACAGACACAAACAGGTCCCACGCGCTGGGTTCTTCCCCACACAGATaGCAACGTCCTGAGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LCRSQGSKTDTNRSHALGSSPHR*QRPESI Trigger: GATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGA...ACCCAGCGCGTGGGACCTGTTTGTGTCTGTTTTGCTTCCTTGGGAACGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS GCA 90 bp | ACAAGCTGGTGTAAGAGCATGGGGTCTAGAAATCCTGCAGACACTTaGTACCTGGACCAGAAAGTCAGAGGCTCAGAGCCTGTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSWCKSMGSRNPADT*YLDQKVRGSEPVQG Trigger: GCCCTGGACAGGCTCTGAGCCTCTGACTTTCTGGTCCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACACCAGCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604870.6 |
||
| CDS-3UTR CAA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGCTGTGACACTCTGCTaGCCGGCAGGGGTCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: YWPSQRALTHGGLFAFSRAVTLC*PAGVPT Trigger: GGTGGGGACCCCTGCCGGCAAGCAGAGTGTCACAGC...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS GCA 90 bp | GGAGGTGGTCAGAGCCAGTGCCAAAGCTCTCTTCCCCACACAGATTaGAACGTCCTGAGTCCATCAGATTTGAGAAGAATCTCCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGQSQCQSSLPHTD*NVLSPSDLRRISIQ Trigger: CTGGATGGAGATTCTTCTCAAATCTGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGAGAGCTTTGGCACTGGCTCTGACCACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000472639.1 |
||
| CDS-3UTR CAA 90 bp | GCAGTACCCTTTTCCCAAGTGAGGAAAGCCAGCTGTGACACTCTGCTTGCCGGCCTGAGTCCATCAGATTaGAGAAGAATCTCCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVPFSQVRKASCDTLLAGLSPSD*RRISIQ Trigger: CTGGATGGAGATTCTTCTCAAATCTGATGGACTCAG...GCCGGCAAGCAGAGTGTCACAGCTGGCTTTCCTCACTTGGGAAAAGGGTACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS GCA 90 bp | ACAAGCTGGTGTAAGAGCATGGGGTCTAGAAATCCTGCAGACACTTaGTACCTGGACCAGAAAGTCAGAGGCTCAGAGCCTGAACCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSWCKSMGSRNPADT*YLDQKVRGSEPEPN Trigger: GTTAGGTTCAGGCTCTGAGCCTCTGACTTTCTGGTCCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACACCAGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587852.2 |
||
| CDS-3UTR CAA 90 bp | AACAGGCTCATCAGCAGATTGGACACAGCTAAGGAAAGAATCAGTGAACTTAAAAGTCGTCCAATCCCGTaGGCCGCGGCCATCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: NRLISRLDTAKERISELKSRPIP*AAAICT Trigger: GGTGCAGATGGCCGCGGCCAACGGGATTGGACGACT...TTTAAGTTCACTGATTCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CAA 90 bp | GGAGTGAGGTGGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACTGGCCAATGAAGGATTaGTCTGTGACCAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVRWAVGSSIIKPSPIVDWPMKD*SVTRAS Trigger: GGAGGCCCTGGTCACAGACAAATCCTTCATTGGCCA...GTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | GGTAGCAAGAAGGCATCAGTGAAGCATCTCCCGCTGAGCACTCTCTTTGGCCCTACTGGGAATGTTTCCTaGCTTGCACTAACCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSKKASVKHLPLSTLFGPTGNVS*LALTLT Trigger: AGTCAAGGTTAGTGCAAGCAAGGAAACATTCCCAGT...AGGGCCAAAGAGAGTGCTCAGCGGGAGATGCTTCACTGATGCCTTCTTGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS CCA 90 bp | GGTGTAAGAGCATGGGGTCTAGAAATCCTGCAGACACTTGCTACCTaGACCAGAAAGTCAGAGGCTCAGAGCCTGAACCTAACCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVRAWGLEILQTLAT*TRKSEAQSLNLTNV Trigger: AACATTGGTTAGGTTCAGGCTCTGAGCCTCTGACTTTCTGGTCCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587852.2 |
||
| CDS-3UTR CAA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGGGACCTTCATTGATTaGGCCACTCTGTCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YWPSQRALTHGGLFAFSRGTFID*ATLSRA Trigger: GGCCCTGGACAGAGTGGCCAAATCAATGAAGGTCCC...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | GGAGTGAGGTGGGCTGTTGGGAGTTCTATAATAAAACCTTCCCCCATTGTAGACAGCTGCCTAGCCCAGTaGTTGTCAAAAGGGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVRWAVGSSIIKPSPIVDSCLAQ*LSKGEV Trigger: AACCTCCCCTTTTGACAACAACTGGGCTAGGCAGCT...GTCTACAATGGGGGAAGGTTTTATTATAGAACTCCCAACAGCCCACCTCACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | AAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTGAGTACAGAGGAGCTTCTCAAGAGGAACTaGTATAAACCCATGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: KQTQTGPTRWVSWLSTEELLKRN*YKPMYQ Trigger: TTGGTACATGGGTTTATACAAGTTCCTCTTGAGAAG...CTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | AAACAGACACAAACAGGTCCCACGCGCTGGGTGTCCTGGCTGAGTACAGAGGAGTACAGCAATAACGCATaGCTTAACAGTCAAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KQTQTGPTRWVSWLSTEEYSNNA*LNSQSA Trigger: TGCACTTTGACTGTTAAGCAATGCGTTATTGCTGTA...CTCCTCTGTACTCAGCCAGGACACCCAGCGCGTGGGACCTGTTTGTGTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTTACAAATAAGATCAGAAATGTGTCCAAACAAGTGCATTAAGATAGGCAGTCGTCCAATCCCGTaGGCCGCGGCCATCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QPLQIRSEMCPNKCIKIGSRPIP*AAAICT Trigger: GGTGCAGATGGCCGCGGCCAACGGGATTGGACGACT...GCCTATCTTAATGCACTTGTTTGGACACATTTCTGATCTTATTTGTAAAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | TGTCAAGAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGAGATTGGGGACCTTCATTGATTaGGCCACTCTGTCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CQEIKQSAEPKSEMNQRLGTFID*ATLSRA Trigger: GGCCCTGGACAGAGTGGCCAAATCAATGAAGGTCCC...CAATCTCTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTCTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CAA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGACTTAGGCCCTGTTTCTaGGTCACAGTGCCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: YWPSQRALTHGGLFAFSRLRPCF*VTVPST Trigger: TGTGGATGGCACTGTGACCAAGAAACAGGGCCTAAG...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS-3UTR CAA 90 bp | GGTAGCAAGAAGGCATCAGTGAAGCATCTCCCGCTGAGCACTCTCTTTGGCCCTGTGCACCATTGTGATTaGTACAAAGCTTTAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSKKASVKHLPLSTLFGPVHHCD*YKALED Trigger: ATCTTCTAAAGCTTTGTACAAATCACAATGGTGCAC...AGGGCCAAAGAGAGTGCTCAGCGGGAGATGCTTCACTGATGCCTTCTTGCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS CCA 90 bp | AAAAGCTTTGTCTTCCATCTTCATAGACAAGCTGGTGTAAGAGCATaGGGTCTAGAAATCCTGCAGACACTTGCTACCTGGACCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSFVFHLHRQAGVRA*GLEILQTLATWTRK Trigger: CTTTCTGGTCCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACACCAGCTTGTCTATGAAGATGGAAGACAAAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587852.2 ENST00000604870.6 |
||
| CDS-3UTR CAA 90 bp | AACCATTGTCAAGAGATAAAGCAATCAGCTGAACCAAAGTCAGAGATGAACCAGTCTTCCCCACACAGATaGCAACGTCCTGAGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NHCQEIKQSAEPKSEMNQSSPHR*QRPESI Trigger: GATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGA...CTGGTTCATCTCTGACTTTGGTTCAGCTGATTGCTTTATCTCTTGACAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
||
| CDS-3UTR CAA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGACACATGGTGGTCTTTTaGCCTTCTCAAGAGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: YWPSQRALTHGGLFAFSRHMVVF*PSQEEL Trigger: AAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGTG...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
||
| CDS GCA 90 bp | ATATGTGACTGCAATTATTTACCCCCACCCCCATCTGGTGATATCTaGTGGGAGACACTATGGTTCCATCTGAGTGTCTTTATGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ICDCNYLPPPPSGDI*WETLWFHLSVFMLF Trigger: AAAAAGCATAAAGACACTCAGATGGAACCATAGTGTCTCCCAGCAGATATCACCAGATGGGGGTGGGGGTAAATAATTGCAGTCACATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS-3UTR CAA 90 bp | AATAACGCATTGCTTAACAGTCAAAGTGCACCAGGTCATTTCCGCAAATGGCAGTTGCTTGCACTAACCTaGACTACAGCAATAACGCAT | + |
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Preference number: 5 (lower is better) Translates to: NNALLNSQSAPGHFRKWQLLALT*TTAITH Trigger: ATGCGTTATTGCTGTAGTCAAGGTTAGTGCAAGCAA...CTGCCATTTGCGGAAATGACCTGGTGCACTTTGACTGTTAAGCAATGCGTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| CDS-3UTR CAA 90 bp | AACAGGCTCATCAGCAGATTGGACACAGCTAAGGAAAGAATCAGTGAACTTAAACTGAGTCCATCAGATTaGAGAAGAATCTCCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: NRLISRLDTAKERISELKLSPSD*RRISIQ Trigger: CTGGATGGAGATTCTTCTCAAATCTGATGGACTCAG...TTTAAGTTCACTGATTCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| CDS-3UTR CAA 90 bp | TCATCAGCAGATTGGACACAGCTAAGGAAAGAATCAGTGAACTTAAAGATGTTCAGGCTCATCAGCAGATaGGACACAGCTAAGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: SSADWTQLRKESVNLKMFRLISR*DTAKER Trigger: TCTTTCCTTAGCTGTGTCCAATCTGCTGATGAGCCT...GAACATCTTTAAGTTCACTGATTCTTTCCTTAGCTGTGTCCAATCTGCTGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| CDS-3UTR CAA 90 bp | AGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGAGGAACTTGTAGAACATTTTCTCACTaGGCACAAGTGATGCACAAA | + |
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Preference number: 5 (lower is better) Translates to: SQRALTHGGLFAFSRGTCRTFSH*AQVMHK Trigger: TTTGTGCATCACTTGTGCCAAGTGAGAAAATGTTCT...ACAAGTTCCTCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| CDS TCA 90 bp | CTACTGGCAACCAATCACTCTGTAATACTGGCTTTGCAGACAGGATaGTATTATCCAGGATTTATTCACTGGGCAAACATTTTAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLATNHSVILALQTG*YYPGFIHWANILVW Trigger: CCACACTAAAATGTTTGCCCAGTGAATAAATCCTGGATAATATCATCCTGTCTGCAAAGCCAGTATTACAGAGTGATTGGTTGCCAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS-3UTR CAA 90 bp | TATTGGCCAAGTCAAAGAGCTCTCACACATGGTGGTCTTTTTGCCTTCTCAAGATTTAATTGCAGAGTCTaGTCAAGAAACTTCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: YWPSQRALTHGGLFAFSRFNCRV*SRNFFP Trigger: TGGGAAGAAGTTTCTTGACAAGACTCTGCAATTAAA...TCTTGAGAAGGCAAAAAGACCACCATGTGTGAGAGCTCTTTGACTTGGCCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396396.6 |
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| CDS-3UTR CAA 90 bp | CAGAGATTGGAACTATCAGACAGGGTGTTTAAAACAACCATGTCTAATATGTTAATACAGGGACCTTCATaGATTTGGCCACTCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: QRLELSDRVFKTTMSNMLIQGPS*IWPLCP Trigger: TGGACAGAGTGGCCAAATCAATGAAGGTCCCTGTAT...TAACATATTAGACATGGTTGTTTTAAACACCCTGTCTGATAGTTCCAATCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| CDS TCA 90 bp | ATGCCCCTGGACCTTGGACTTCTCAGCCTCCATAACTGTAAGAAATaGATTCCTTTTCTTCATAAATTACCAAGTTTCAGGTATTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: MPLDLGLLSLHNCKK*IPFLHKLPSFRYSR Trigger: TCTAGAATACCTGAAACTTGGTAATTTATGAAGAAAAGGAATTCATTTCTTACAGTTATGGAGGCTGAGAAGTCCAAGGTCCAGGGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587852.2 ENST00000604870.6 |
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| CDS GCA 72 bp | CTGGTCATGGCCGCTGGGATCCCTCTCGTAGCTCTCTaGGTACAGTCTGAGGGTGGCCCGCACACCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LVMAAGIPLVAL*VQSEGGPHTTG Trigger: TCCAGTGGTGTGCGGGCCACCCTCAGACTGTACGCAGAGAGCTACGAGAGGGATCCCAGCGGCCATGACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000496758.1 |
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| CDS TCA 72 bp | CCATCCAGCTGGGGTCTCATATACAGGGACCTTCATTaGTTTGGCCACTCTGTCCAGGGCCATGCTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSWGLIYRDLH*FGHSVQGHAGW Trigger: CCAACCAGCATGGCCCTGGACAGAGTGGCCAAATCAATGAAGGTCCCTGTATATGAGACCCCAGCTGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396392.5 ENST00000396396.6 |
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| CDS CAA 72 bp | TGGCTCCCCACAGCAAACTGCTGGCCAATGAAGGATTaGTCTGTGACCAGGGCCTCCAGGTCCCTCATGATA | + |
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Preference number: 6 (lower is better) Translates to: WLPTANCWPMKD*SVTRASRSLMI Trigger: TATCATGAGGGACCTGGAGGCCCTGGTCACAGACAAATCCTTCATTGGCCAGCAGTTTGCTGTGGGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000472639.1 |
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| CDS TCA 72 bp | TTCCCGTTGTCACTACACGTGGGGCGCGTGAGCACGTaGCTCTGCTCAGAACTATGGCTTACCCATAAATTG | + |
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Preference number: 6 (lower is better) Translates to: FPLSLHVGRVST*LCSELWLTHKL Trigger: CAATTTATGGGTAAGCCATAGTTCTGAGCAGAGTCACGTGCTCACGCGCCCCACGTGTAGTGACAACGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS CAA 90 bp | CGGAGGTGGTCAGAGCCAGTGCCAAAGCTCTCTTCCCCACACAGATaGCAACGTCCTGAGTCCATCAGATTTGAGAAGAATCTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: RRWSEPVPKLSSPHR*QRPESIRFEKNLHP Trigger: TGGATGGAGATTCTTCTCAAATCTGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGAGAGCTTTGGCACTGGCTCTGACCACCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000472639.1 |
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| CDS CAA 90 bp | AATCTCCATCCAGCTGGGGTCTCATATACAGGGACCTTCATTGATTaGGCCACTCAGCTACTAGGAAGGCTGATTGCTGACAGCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: NLHPAGVSYTGTFID*ATQLLGRLIADSSQ Trigger: CTGCGAGCTGTCAGCAATCAGCCTTCCTAGTAGCTGAGTGGCCAAATCAATGAAGGTCCCTGTATATGAGACCCCAGCTGGATGGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472639.1 |
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| CDS GCA 72 bp | TGTAAGAGCATGGGGTCTAGAAATCCTGCAGACACTTaGTACCTGGACCAGAAAGTCAGAGGCTCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CKSMGSRNPADT*YLDQKVRGSEP Trigger: AGGCTCTGAGCCTCTGACTTTCTGGTCCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587852.2 ENST00000604870.6 |
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| CDS CAA 72 bp | CCAGCTGGGGTCTCATATACAGGGACCTTCATTGATTaGGCCACTCAGCTACTAGGAAGGCTGATTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: PAGVSYTGTFID*ATQLLGRLIAD Trigger: GTCAGCAATCAGCCTTCCTAGTAGCTGAGTGGCCAAATCAATGAAGGTCCCTGTATATGAGACCCCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472639.1 |
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| CDS CAA 72 bp | GAGGTCCTAACCCACCTGTTGCAGATTCCAAGTCACTaGGGATTACCTCTTCTGATGAGCCCCCAGACTCAA | + |
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Preference number: 6 (lower is better) Translates to: EVLTHLLQIPSH*GLPLLMSPQTQ Trigger: TTGAGTCTGGGGGCTCATCAGAAGAGGTAATCCCAAGTGACTTGGAATCTGCAACAGGTGGGTTAGGACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS GCA 72 bp | CAGAGCCAGTGCCAAAGCTCTCTTCCCCACACAGATTaGAACGTCCTGAGTCCATCAGATTTGAGAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: QSQCQSSLPHTD*NVLSPSDLRRI Trigger: GATTCTTCTCAAATCTGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGAGAGCTTTGGCACTGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000472639.1 |
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| CDS CCA 72 bp | GTCTTCCATCTTCATAGACAAGCTGGTGTAAGAGCATaGGGTCTAGAAATCCTGCAGACACTTGCTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: VFHLHRQAGVRA*GLEILQTLATW Trigger: CCAGGTAGCAAGTGTCTGCAGGATTTCTAGACCCCATGCTCTTACACCAGCTTGTCTATGAAGATGGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587852.2 ENST00000604870.6 |
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| CDS CAA 72 bp | TCAGAGCCAGTGCCAAAGCTCTCTTCCCCACACAGATaGCAACGTCCTGAGTCCATCAGATTTGAGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SEPVPKLSSPHR*QRPESIRFEKN Trigger: ATTCTTCTCAAATCTGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGAGAGCTTTGGCACTGGCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396396.6 ENST00000472639.1 |
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| CDS CAA 90 bp | GAGCTGTGGCCACATCTACTAGTGCTGCCTAGGATTAATTCCTCATaGGCTCAGCACATCTCCATTCGCTATGTATCTCTTCTCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: ELWPHLLVLPRINSS*AQHISIRYVSLLSR Trigger: TCTACTGAGAAGAGATACATAGCGAATGGAGATGTGCTGAGCCAATGAGGAATTAATCCTAGGCAGCACTAGTAGATGTGGCCACAGCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS CAA 90 bp | CGTGACCCAGTTCCCAGCTTGAATTTTCCCTGTGGCTTAATGAGTTaGGGGGTCCCAAGATTGAATTTCCTTTCACACTTCTTACCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RDPVPSLNFPCGLMS*GVPRLNFLSHFLPD Trigger: GTCAGGTAAGAAGTGTGAAAGGAAATTCAATCTTGGGACCCCCAAACTCATTAAGCCACAGGGAAAATTCAAGCTGGGAACTGGGTCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS GCA 72 bp | TGCAATTATTTACCCCCACCCCCATCTGGTGATATCTaGTGGGAGACACTATGGTTCCATCTGAGTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CNYLPPPPSGDI*WETLWFHLSVF Trigger: AAAGACACTCAGATGGAACCATAGTGTCTCCCAGCAGATATCACCAGATGGGGGTGGGGGTAAATAATTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS GCA 72 bp | TCTAAACAGTGCCAAAGCTCTCTTCCCCACACAGATTaGAACGTCCTGAGTCCATCAGATTTGAGAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: SKQCQSSLPHTD*NVLSPSDLRRI Trigger: GATTCTTCTCAAATCTGATGGACTCAGGACGTTGCAATCTGTGTGGGGAAGAGAGCTTTGGCACTGTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396392.5 |
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| CDS CAA 72 bp | GTTCCCAGCTTGAATTTTCCCTGTGGCTTAATGAGTTaGGGGGTCCCAAGATTGAATTTCCTTTCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: VPSLNFPCGLMS*GVPRLNFLSHF Trigger: GAAGTGTGAAAGGAAATTCAATCTTGGGACCCCCAAACTCATTAAGCCACAGGGAAAATTCAAGCTGGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS GCA 72 bp | CAGATATGCATTTGTGTCTGGTGGGCCAGGGGTGACTaGATCTATAAACTATCAATTTATATTGCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: QICICVWWARGD*IYKLSIYIAMV Trigger: CACCATGGCAATATAAATTGATAGTTTATAGATGCAGTCACCCCTGGCCCACCAGACACAAATGCATATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS CCA 72 bp | GTGTGGCCCTTATGGATTAGGCACTGTGCTAAATCCTaGGTATATGAATATAAAGACACAATAGTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VWPLWIRHCAKS*VYEYKDTIVVL Trigger: GAGGACAACTATTGTGTCTTTATATTCATATACCCAGGATTTAGCACAGTGCCTAATCCATAAGGGCCACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS TCA 72 bp | AACTGTCTTCTTAACCACCTTATGCTGCTGGAGAAGTaGATAGTTACAAAATTCCAAATGGAGCAAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: NCLLNHLMLLEK*IVTKFQMEQVK Trigger: CTTCACTTGCTCCATTTGGAATTTTGTAACTATTCACTTCTCCAGCAGCATAAGGTGGTTAAGAAGACAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS TCA 72 bp | ACCAATCACTCTGTAATACTGGCTTTGCAGACAGGATaGTATTATCCAGGATTTATTCACTGGGCAAACATT | + |
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Preference number: 6 (lower is better) Translates to: TNHSVILALQTG*YYPGFIHWANI Trigger: AATGTTTGCCCAGTGAATAAATCCTGGATAATATCATCCTGTCTGCAAAGCCAGTATTACAGAGTGATTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS CCA 72 bp | AGGATATTGAGAAGTACACAATTTTCATGTAAGAGGTaGGTAGGGAAAAACAGTCATTCATGCCTTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RILRSTQFSCKR*VGKNSHSCLCL Trigger: CAGACAAAGGCATGAATGACTGTTTTTCCCTACCCACCTCTTACATGAAAATTGTGTACTTCTCAATATCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS TCA 72 bp | GACCTTGGACTTCTCAGCCTCCATAACTGTAAGAAATaGATTCCTTTTCTTCATAAATTACCAAGTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: DLGLLSLHNCKK*IPFLHKLPSFR Trigger: CCTGAAACTTGGTAATTTATGAAGAAAAGGAATTCATTTCTTACAGTTATGGAGGCTGAGAAGTCCAAGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587852.2 ENST00000604870.6 |
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| CDS CCA 72 bp | GCATTCTCCCAAAGCAATTTATCCTTGAAATTTCTCTaGCCTCAAGTCCTGTTTAAGAATAAGCCATTAGTA | + |
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Preference number: 6 (lower is better) Translates to: AFSQSNLSLKFL*PQVLFKNKPLV Trigger: TACTAATGGCTTATTCTTAAACAGGACTTGAGGCCAGAGAAATTTCAAGGATAAATTGCTTTGGGAGAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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| CDS CAA 72 bp | TATACCTCAACACAATCAGAATCAAGACCATTTATATaGGCTCTGGATACAGGGCATGTAATGAATGTGATG | + |
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Preference number: 6 (lower is better) Translates to: YTSTQSESRPFI*ALDTGHVMNVM Trigger: CATCACATTCATTACATGCCCTGTATCCAGAGCCAATATAAATGGTCTTGATTCTGATTGTGTTGAGGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496758.1 |
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