RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169299

Ensembl transcript IDs: ENST00000381967.9, ENST00000505986.5, ENST00000510084.2, ENST00000512556.1, ENST00000515668.5, ENST00000625312.2

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCAAGACACCTTTCCCCTCTTCGGGATTCGGGTATTTCACTGTTaGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: SQDTFPLFGIRVFHC*KLRIRIFLFRNSLR
Trigger: CCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGAGGGGAAAGGTGTCTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR TCA 90 bp CATCTGAGATGTCAATTTTGGAGTAGGACAGTTCGACATTCAACCTaGGTGCTGGAGAGGCAAAATAAACCGTGTTTCACTGTGGATCTT +
Preference number: 1 (lower is better)
Translates to: HLRCQFWSRTVRHST*VLERQNKPCFTVDL
Trigger: AAGATCCACAGTGAAACACGGTTTATTTTGCCTCTCCAGCACTCAGGTTGAATGTCGAACTGTCCTACTCCAAAATTGACATCTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR CCA 90 bp GATGTCAATTTTGGAGTAGGACAGTTCGACATTCAACCTGAGTGCTaGAGAGGCAAAATAAACCGTGTTTCACTGTGGATCTTTGAATCC +
Preference number: 1 (lower is better)
Translates to: DVNFGVGQFDIQPEC*RGKINRVSLWIFES
Trigger: GGATTCAAAGATCCACAGTGAAACACGGTTTATTTTGCCTCTCCAGCACTCAGGTTGAATGTCGAACTGTCCTACTCCAAAATTGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR CCA 90 bp GTTAAACCCAGCTTAATTGTAGGTAAATGCAAGTATACCCAAGGCTaGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: VKPSLIVGKCKYTQG*TILVCFWLQIVLLW
Trigger: CCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTACAATTAAGCTGGGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR GCA 90 bp CACTGTGGATCTTTGAATCCCAATCCAAACCTTTTCCTTTTGCCTTaGAGCCAATTCCTTAATGTTCATGATCACTTCTTACCAATAGCT +
Preference number: 1 (lower is better)
Translates to: HCGSLNPNPNLFLLP*SQFLNVHDHFLPIA
Trigger: AGCTATTGGTAAGAAGTGATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGGGATTCAAAGATCCACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR-3UTR GCA 90 bp GTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGGAAACAGTACGCTCTGTCCCACTGGTaGGCATGGTGGCCACGCCTC +
Preference number: 2 (lower is better)
Translates to: VCTNFTFVSLFTLLWKQYALSHW*AWWPRL
Trigger: GAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGC...GTACTGTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR GCA 90 bp CTTGATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCGAAGCTAGCCAACTCTaGACTTATGACAGCGGCACT +
Preference number: 2 (lower is better)
Translates to: LDFGLCPTGAHGGHASISEASQL*TYDSGT
Trigger: AGTGCCGCTGTCATAAGTGCAGAGTTGGCTAGCTTC...GCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR TCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACACCCCAACTCATTGCCTaGAAACACCCTCCATTCACC +
Preference number: 2 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTPQLIA*KHPPFT
Trigger: GGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGG...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR GCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACAGGGCCCCCAACTCATTaGCTGAAAACACCCTCCATT +
Preference number: 2 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTGPPTH*LKTPSI
Trigger: AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCC...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR TCA 90 bp AACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGT +
Preference number: 2 (lower is better)
Translates to: NLPLRQWPARFWRRRCWTTCTCL*EHCDPG
Trigger: ACCAGGATCGCAGTGCTCTCAAAGACACGTACATGT...TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR GCA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGGGCCCCCAACTCATTaGCTGAAAACACCCTCCATT +
Preference number: 2 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFGPPTH*LKTPSI
Trigger: AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCC...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR GCA 90 bp CCCAGCTTAATTGTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCGCTCTGTCCCACTGGTaGGCATGGTGGCCACGCCTC +
Preference number: 2 (lower is better)
Translates to: PSLIVGKCKYTQGWTILVALSHW*AWWPRL
Trigger: GAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGC...GACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTACAATTAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR-3UTR GCA 90 bp GGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTTGGGGCACACAGCTCTaGATAGTACTTGATTTTGGG +
Preference number: 2 (lower is better)
Translates to: GDGAGQHVRVFESTAILVWGTQL*IVLDFG
Trigger: CCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCA...AACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR GCA 90 bp GAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCAGTTCCTTCTTCAGCTaGTCAGGATCACTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: ETVLDNMYVSLRALRSWFSSFFS*SGSLFP
Trigger: TGGGAACAGTGATCCTGAGCAGCTGAAGAAGGAACT...GAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR CCA 90 bp GCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTCGGGTATTTCACTGTTaGAAACTCAGGATCCGGATC +
Preference number: 2 (lower is better)
Translates to: AMARKILEETVLDNMYVSRVFHC*KLRIRI
Trigger: GATCCGGATCCTGAGTTTCCAACAGTGAAATACCCG...AGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR TCA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGAATCGTCCCAAGCTTaGGGCCACGGTTCTAGATTT +
Preference number: 2 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFESSQA*GHGSRF
Trigger: AAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTC...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR TCA 90 bp CAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGCTGGACTGCACAAAGCTATaGCCCACCCCATGGACAGAG +
Preference number: 2 (lower is better)
Translates to: QGWTILVCFWLQIVLLWLDCTKL*PTPWTE
Trigger: CTCTGTCCATGGGGTGGGTCATAGCTTTGTGCAGTC...CAGCCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR GCA 90 bp GAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCCATTCACCACTGTCTTaGTTTTCTGCCACAGCAAGT +
Preference number: 2 (lower is better)
Translates to: ETVLDNMYVSLRALRSWFHSPLS*FSATAS
Trigger: ACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATG...GAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR GCA 90 bp CTTGATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCTGGACTATTTTAGTCTaGTTTTGGCTGCAGATTGTA +
Preference number: 2 (lower is better)
Translates to: LDFGLCPTGAHGGHASISWTILV*FWLQIV
Trigger: TACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCA...GCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR-3UTR CCA 90 bp GGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGAACAAGGGAAGCACTCGGATTGTaGAGAAGTGGACTGCTATCA +
Preference number: 2 (lower is better)
Translates to: GNSGSGSFCSGTASGGTREALGL*RSGLLS
Trigger: TGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTC...CCTTGTTCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CCA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACATGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACA +
Preference number: 2 (lower is better)
Translates to: NSLPENTLHSPLSCFSATWPARF*RRRCWT
Trigger: TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCA...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp CCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTCTGTTCACGCTCCTGTaGAAACAGTACTTTTTAAGG +
Preference number: 2 (lower is better)
Translates to: PGGPPTHCLKTPSIHHCLLFTLL*KQYFLR
Trigger: CCTTAAAAAGTACTGTTTCCACAGGAGCGTGAACAG...AAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR CAA 90 bp AAGTCAAGACACCTTTCCCCTCTTCGGGATTCGGGTATTTCACTGTaGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: KSRHLSPLRDSGISL*ETQDPDLSVQEQPQ
Trigger: CTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGAGGGGAAAGGTGTCTTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CCA 90 bp ACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGAGAAGCACTCGGATTGTaGAGAAGTGGACTGCTATCA +
Preference number: 2 (lower is better)
Translates to: TVGNSGSGSFCSGTASGGEALGL*RSGLLS
Trigger: TGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTC...TCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CCA 90 bp ACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGATCACTGTTCCCAGGTaGGGCACACAGCTCTGCATA +
Preference number: 2 (lower is better)
Translates to: TQGWTILVCFWLQIVLLWITVPR*GTQLCI
Trigger: TATGCAGAGCTGTGTGCCCCACCTGGGAACAGTGAT...CCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR-3UTR CCA 90 bp AAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGATCACTGTTCCCAGGTaGGGCACACAGCTCTGCATA +
Preference number: 2 (lower is better)
Translates to: KTPSIHHCLAFLPQQVYQITVPR*GTQLCI
Trigger: TATGCAGAGCTGTGTGCCCCACCTGGGAACAGTGAT...CTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR TCA 90 bp ACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGATATCGTGAGGAGAAATaGTCTGAGCTCCATTATCCC +
Preference number: 2 (lower is better)
Translates to: TVGNSGSGSFCSGTASGGYREEK*SELHYP
Trigger: GGGATAATGGAGCTCAGATCATTTCTCCTCACGATA...TCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR TCA 90 bp CATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTGAATCGTCCCAAGCTTaGGGCCACGGTTCTAGATTT +
Preference number: 2 (lower is better)
Translates to: HVRVFESTAILVLLFPRCESSQA*GHGSRF
Trigger: AAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTC...ACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp CCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: PGGPPTHCLKTPSIHHCLTIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...AAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR CAA 90 bp CGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTaGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAAA +
Preference number: 2 (lower is better)
Translates to: RKILEETVLDNMYVS*RALRSWFFSFQDVK
Trigger: TTTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR CAA 90 bp AAGCTAGCCAACTCTGCACTTATGACAGCGGCACTGACTCCATCTTaGTCCAGAACAAAAGGGCAGCACATGTATCCAATAGCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: KLANSALMTAALTPS*SRTKGQHMYPIASS
Trigger: TGAAGAAGCTATTGGATACATGTGCTGCCCTTTTGTTCTGGACAAAGATGGAGTCAGTGCCGCTGTCATAAGTGCAGAGTTGGCTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR GCA 90 bp CCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACTGTGGAGAAGTGGACTaGTATCAATTAAAGAATCGT +
Preference number: 2 (lower is better)
Translates to: PSFKAMARKILEETVLDNCGEVD*YQLKNR
Trigger: ACGATTCTTTAATTGATAGCAGTCCACTTCTCCACA...GTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp ACAGTTTTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGTGGAGGAGACGGTGCTaGACAACATGTACGTGTCTT +
Preference number: 2 (lower is better)
Translates to: TVFPWSISCLALFPIHLKWRRRC*TTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA...CTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAAAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp ATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTATGGAGGAGACGGTGCTaGACAACATGTACGTGTCTT +
Preference number: 2 (lower is better)
Translates to: MYVSLRALRSWFFSFQDVWRRRC*TTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA...TACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp TCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTTCCTGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACA +
Preference number: 2 (lower is better)
Translates to: SISCLALFPIHLKPVNVSWPARF*RRRCWT
Trigger: TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCA...GGAAACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACACTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: NSLPENTLHSPLSCFSATLPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp TTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTCGGGTATTTCACTGTTaGAAACTCAGGATCCGGATC +
Preference number: 2 (lower is better)
Translates to: FPWSISCLALFPIHLKPVRVFHC*KLRIRI
Trigger: GATCCGGATCCTGAGTTTCCAACAGTGAAATACCCG...AACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR TCA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACTCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 2 (lower is better)
Translates to: FKAMARKILEETVLDNMYSCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR TCA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAAAAAGCCTTGAAAGCTaGCTGCACAAAGCTATGACC +
Preference number: 2 (lower is better)
Translates to: NSLPENTLHSPLSCFSATKSLES*LHKAMT
Trigger: GGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTT...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR GCA 90 bp ACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGACTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 2 (lower is better)
Translates to: TVGNSGSGSFCSGTASGGLWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...TCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR GCA 90 bp CAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGGAAACTGTGGAGAAGTGGACTaGTATCAATTAAAGAATCGT +
Preference number: 2 (lower is better)
Translates to: QRCAQTSPLSPCSRSCGNCGEVD*YQLKNR
Trigger: ACGATTCTTTAATTGATAGCAGTCCACTTCTCCACA...GTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR GCA 90 bp ATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTATTTTGGAGGAGACGGTaGTGGACAACATGTACGTGT +
Preference number: 2 (lower is better)
Translates to: MYVSLRALRSWFFSFQDVFWRRR*WTTCTC
Trigger: ACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAA...TACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp CATGGACAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: HGQRCAQTSPLSPCSRSCTIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...ACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTGTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CCA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTAAACAATTCTGGCCTTaGTTTTGTCAGCCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFKQFWP*FCQPKQ
Trigger: TTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTT...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp ACAGTTTTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: TVFPWSISCLALFPIHLKLPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...CTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp AACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAATTTTAGTCTGCTTTTaGCTGCAGATTGTACTTCTG +
Preference number: 2 (lower is better)
Translates to: NLPLRQWPARFWRRRCWTILVCF*LQIVLL
Trigger: CAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAAT...TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR CCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCTGTTCACGCTCCTGTaGAAACAGTACTTTTTAAGG +
Preference number: 2 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQLFTLL*KQYFLR
Trigger: CCTTAAAAAGTACTGTTTCCACAGGAGCGTGAACAG...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR TCA 90 bp TTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCA +
Preference number: 2 (lower is better)
Translates to: FHCWKLRIRIFLFRNSLREMQLS*FQHKVS
Trigger: TGAAACTTTGTGCTGGAATCATGATAACTGCATCTC...CCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR-3UTR TCA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGT +
Preference number: 2 (lower is better)
Translates to: WSISCLALFPIHLKPVNVTCTCL*EHCDPG
Trigger: ACCAGGATCGCAGTGCTCTCAAAGACACGTACATGT...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR GCA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCCCTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 2 (lower is better)
Translates to: LSASGSLAKTILALVLSALWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...GGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CCA 90 bp TCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAAACAATTCTGGCCTTaGTTTTGTCAGCCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: SLPENTLHSPLSCFSATAKQFWP*FCQPKQ
Trigger: TTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTT...TGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR TCA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACATCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 2 (lower is better)
Translates to: NSLPENTLHSPLSCFSATSCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR TCA 90 bp TTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTCAAAGTAGTCATTATTaGTGGAAGCACTCGGATTGT +
Preference number: 2 (lower is better)
Translates to: FPWSISCLALFPIHLKPVQSSHY*WKHSDC
Trigger: ACAATCCGAGTGCTTCCATCAATAATGACTACTTTG...AACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR TCA 90 bp ACTCCATCTTTGTCCAGAACAAAAGGGCAGCACATGTATCCAATAGCTTCTTCAAAAAGCCTTGAAAGCTaGCTGCACAAAGCTATGACC +
Preference number: 2 (lower is better)
Translates to: TPSLSRTKGQHMYPIASSKSLES*LHKAMT
Trigger: GGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTT...TGAAGAAGCTATTGGATACATGTGCTGCCCTTTTGTTCTGGACAAAGATGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR CAA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGACAAAGTCTGTGGAAACAGTACTTTT +
Preference number: 2 (lower is better)
Translates to: LSASGSLAKTILALV*SAKAKDKVCGNSTF
Trigger: AAAAGTACTGTTTCCACAGACTTTGTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515668.5
3UTR-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGCTCATAGGTCTTGCTaGCTCCAAACCAGGAATTAC +
Preference number: 2 (lower is better)
Translates to: VYKESLILAHGCPTGVILAHRSC*LQTRNY
Trigger: GTAATTCCTGGTTTGGAGGCAGCAAGACCTATGAGC...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
3UTR-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGCTTGCTCATAGGTCTTaGTGCCTCCAAACCAGGAAT +
Preference number: 2 (lower is better)
Translates to: VYKESLILAHGCPTGVILLAHRS*CLQTRN
Trigger: ATTCCTGGTTTGGAGGCAGCAAGACCTATGAGCAAG...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
3UTR CAA 90 bp AAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTaGGAAGGCTGTAAGACCACGAATTATGAGAAGATAGAAGGTACA +
Preference number: 2 (lower is better)
Translates to: KESLILAHGCPTGVI*EGCKTTNYEKIEGT
Trigger: TGTACCTTCTATCTTCTCATAATTCGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381967.9
3UTR-3UTR CCA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAAACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: VRVFESTAILVLLFPRCKTIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR CAA 90 bp GTGTTTCACTGTGGATCTTTGAATCCCAATCCAAACCTTTTCCTTTaGCCTTGCAGCCAATTCCTTAATGTTCATGATCACTTCTTACCA +
Preference number: 2 (lower is better)
Translates to: VFHCGSLNPNPNLFL*PCSQFLNVHDHFLP
Trigger: TGGTAAGAAGTGATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGGGATTCAAAGATCCACAGTGAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR-3UTR TCA 90 bp GCTGTAAATCATCTGAGATGTCAATTTTGGAGTAGGACAGTTCGACATTCAACCTCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 2 (lower is better)
Translates to: AVNHLRCQFWSRTVRHSTSCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...GGTTGAATGTCGAACTGTCCTACTCCAAAATTGACATCTCAGATGATTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR-3UTR CCA 90 bp CTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGCTGGAAAAAAGTATACCCAAGGCTaGACTATTTTAGTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LDYFSLLLAADCTSVAGKKYTQG*TILVCF
Trigger: AAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTT...TTTTCCAGCCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR-3UTR GCA 90 bp TCATTATTGATGGAAGCACTCGGATTGTGGAGAAGTGGACTGCTATCAATTAAACTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLLMEALGLWRSGLLSIKLWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...TTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR TCA 72 bp AAGCCACCAGCCCAGGAGGGCCCCCAACTCATTGCCTaGAAACACCCTCCATTCACCACTGTCTTGCTTTTC +
Preference number: 3 (lower is better)
Translates to: KPPAQEGPQLIA*KHPPFTTVLLF
Trigger: GAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGGGCTGGTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp AACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCAAGGGCCCCCAACTCATaGCCTGAAAACACCCTCCAT +
Preference number: 3 (lower is better)
Translates to: NTLHSPLSCFSATASLSARAPNS*PENTLH
Trigger: ATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCT...TGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR TCA 72 bp TGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: WRRRCWTTCTCL*EHCDPGSSLSK
Trigger: CTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp GAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGAC +
Preference number: 3 (lower is better)
Translates to: ETVLDNMYVSLRALRSWFILALV*SAKAKD
Trigger: GTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAAT...GAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp AGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: RRAPNSLPENTLHSPLSCKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...GCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp CTTGATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCTATTTTAGTCTGCTTTaGGCTGCAGATTGTACTTCT +
Preference number: 3 (lower is better)
Translates to: LDFGLCPTGAHGGHASISYFSLL*AADCTS
Trigger: AGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATA...GCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR-3UTR CAA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGATGGAAGCACTCGGATaGTGGAGAAGTGGACTGCTA +
Preference number: 3 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQMEALG*WRSGLL
Trigger: TAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCAT...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR CCA 72 bp GAAAACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACAACATGTACGTGTCTT +
Preference number: 3 (lower is better)
Translates to: ENLPLRQWPARF*RRRCWTTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR CCA 72 bp ACCTTTCCCCTCTTCGGGATTCGGGTATTTCACTGTTaGAAACTCAGGATCCGGATCTTTCTGTTCAGGAAC +
Preference number: 3 (lower is better)
Translates to: TFPLFGIRVFHC*KLRIRIFLFRN
Trigger: GTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGAGGGGAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CAA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGTCGGGTATTTCACTGTaGGAAACTCAGGATCCGGAT +
Preference number: 3 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQSGISL*ETQDPD
Trigger: ATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGA...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CAA 90 bp CATGGACAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTAACCATTATCCTGCTTaGGATTGTGAGATGCAGTTA +
Preference number: 3 (lower is better)
Translates to: HGQRCAQTSPLSPCSRSCNHYPA*DCEMQL
Trigger: TAACTGCATCTCACAATCCAAAGCAGGATAATGGTT...ACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTGTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CAA 90 bp GATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGAACCATTATCCTGCTTaGGATTGTGAGATGCAGTTA +
Preference number: 3 (lower is better)
Translates to: DFGGDGAGQHVRVFESTANHYPA*DCEMQL
Trigger: TAACTGCATCTCACAATCCAAAGCAGGATAATGGTT...CGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp GTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGGAAACAGTACAGTAGGAATGTTAGTTaGTTGGGTTTGGCCATTTTC +
Preference number: 3 (lower is better)
Translates to: VCTNFTFVSLFTLLWKQYSRNVS*LGLAIF
Trigger: GAAAATGGCCAAACCCAACAAACTAACATTCCTACT...GTACTGTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR-3UTR CAA 90 bp TCTTCGGGATTCGGGTATTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGAC +
Preference number: 3 (lower is better)
Translates to: SSGFGYFTVGNSGSGSFCILALV*SAKAKD
Trigger: GTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAAT...ACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CAA 90 bp TCTTCGGGATTCGGGTATTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTACAAGGTCAAAAGCCTaGAAAGCTGACTGCACAAAG +
Preference number: 3 (lower is better)
Translates to: SSGFGYFTVGNSGSGSFCTRSKA*KADCTK
Trigger: CTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGT...ACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CAA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: NSLPENTLHSPLSCFSATKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp AGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAACAAGGTCAAAAGCCTaGAAAGCTGACTGCACAAAG +
Preference number: 3 (lower is better)
Translates to: SLSASGSLAKTILALVLSTRSKA*KADCTK
Trigger: CTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGT...TGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR-3UTR CAA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAAAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: VRVFESTAILVLLFPRCKKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp TCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTTCCTGGTCTATTAGCTGTTaGGCTCTGTTTCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: SISCLALFPIHLKPVNVSWSISC*ALFPIH
Trigger: GTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA...GGAAACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
3UTR-3UTR CAA 90 bp AACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATATTTTAGTCTGCTTTaGGCTGCAGATTGTACTTCT +
Preference number: 3 (lower is better)
Translates to: NTLHSPLSCFSATASLSAYFSLL*AADCTS
Trigger: AGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATA...TGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
3UTR TCA 72 bp TGTCAATTTTGGAGTAGGACAGTTCGACATTCAACCTaGGTGCTGGAGAGGCAAAATAAACCGTGTTTCACT +
Preference number: 3 (lower is better)
Translates to: CQFWSRTVRHST*VLERQNKPCFT
Trigger: AGTGAAACACGGTTTATTTTGCCTCTCCAGCACTCAGGTTGAATGTCGAACTGTCCTACTCCAAAATTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR GCA 72 bp AAAGTATATAAAGAAAGTTTGATCCTAGCTCATGGGTaGCCAACTGGAGTTATTTTGGAAGGCTGTAAGACC +
Preference number: 3 (lower is better)
Translates to: KVYKESLILAHG*PTGVILEGCKT
Trigger: GGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
3UTR CCA 72 bp AGCTTAATTGTAGGTAAATGCAAGTATACCCAAGGCTaGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTA +
Preference number: 3 (lower is better)
Translates to: SLIVGKCKYTQG*TILVCFWLQIV
Trigger: TACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTACAATTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
3UTR-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAAGTAGGAATGTTAGTTaGTTGGGTTTGGCCATTTTC +
Preference number: 3 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTSRNVS*LGLAIF
Trigger: GAAAATGGCCAAACCCAACAAACTAACATTCCTACT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
3UTR GCA 72 bp GACCTTATAACCATTATCCTGCTTTGGATTGTGAGATaGAGTTATCATGATTCCAGCACAAAGTTTCAAATG +
Preference number: 3 (lower is better)
Translates to: DLITIILLWIVR*SYHDSSTKFQM
Trigger: CATTTGAAACTTTGTGCTGGAATCATGATAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
3UTR CCA 72 bp ATTATCCCAATAGACCTTATAACCATTATCCTGCTTTaGATTGTGAGATGCAGTTATCATGATTCCAGCACA +
Preference number: 3 (lower is better)
Translates to: IIPIDLITIILL*IVRCSYHDSST
Trigger: TGTGCTGGAATCATGATAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp CCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGGTGAAGGTGATCATCACTGGGCGGTCTCCTaGTCCAGCCGGGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PTGAHGGHASISKGEGDHHWAVS*SSRASS
Trigger: CGAGGACGCCCGGCTGGACCAGGAGACCGCCCAGTG...ATGATCACCTTCACCTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR TCA 90 bp AAAGCCACCAGCCCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCCCCCACTGGATGGATaGGCTCGGGCGTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: KATSPGGPPTHCLKTPSIPPLDG*ARASKL
Trigger: CAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGG...AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGGGCTGGTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp GGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTTGGAGCCGCCATCGCTaGGCTTGTGCTACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GDGAGQHVRVFESTAILVWSRHR*ACATAA
Trigger: TGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCA...AACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515668.5
CDS-3UTR CCA 90 bp TCTTCGGGATTCGGGTATTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTCACTGGGCGGTCTCCTaGTCCAGCCGGGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SSGFGYFTVGNSGSGSFCHWAVS*SSRASS
Trigger: CGAGGACGCCCGGCTGGACCAGGAGACCGCCCAGTG...ACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGTGGGCTCTGTCCCACTaGTGCGCATGGTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTWALSH*CAWWPR
Trigger: GCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCA...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACTGGGCTCTGTCCCACTaGTGCGCATGGTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: FKAMARKILEETVLDNMYWALSH*CAWWPR
Trigger: GCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCA...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CCA 90 bp GCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTGCTACCCCCACTGGATaGATGAGCTCGGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: AMARKILEETVLDNMYVSATPTG*MSSGVK
Trigger: TTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGC...AGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGCCCCCACTGGATGGATaGGCTCGGGCGTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTPPLDG*ARASKL
Trigger: CAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGG...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp CCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGGTGAAGGTGATCATGAATCGTCCCAAGCTTaGGGCCACGGTTCTAGATTT +
Preference number: 4 (lower is better)
Translates to: PTGAHGGHASISKGEGDHESSQA*GHGSRF
Trigger: AAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTC...ATGATCACCTTCACCTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR TCA 90 bp CCATGGACAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGGACTGCACAAAGCTATaGCCCACCCCATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PWTEVCTNFTFVSLFTLLDCTKL*PTPWTE
Trigger: CTCTGTCCATGGGGTGGGTCATAGCTTTGTGCAGTC...CAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTGTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR GCA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACACCTCGCCTAGACCGCTaGCTTCTGGAGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: NSLPENTLHSPLSCFSATPRLDR*LLEPPS
Trigger: CGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGG...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp CCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGGGCCCCCAACTCATTaGCTGAAAACACCCTCCATT +
Preference number: 4 (lower is better)
Translates to: PGGPPTHCLKTPSIHHCLGPPTH*LKTPSI
Trigger: AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCC...AAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp ATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGGAAGCTAGCCAACTCTaGACTTATGACAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: ILGSVPLVRMVATPPLAKEASQL*TYDSGT
Trigger: AGTGCCGCTGTCATAAGTGCAGAGTTGGCTAGCTTC...CTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR GCA 90 bp CATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTGCTCTGTCCCACTGGTaGGCATGGTGGCCACGCCTC +
Preference number: 4 (lower is better)
Translates to: HVRVFESTAILVLLFPRCALSHW*AWWPRL
Trigger: GAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGC...ACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CCA 90 bp ACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGTGGGCTCTGTCCCACTaGTGCGCATGGTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TQGWTILVCFWLQIVLLWWALSH*CAWWPR
Trigger: GCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCA...CCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR TCA 90 bp CCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGGPPTHCLKTPSIHHCLTCTCL*EHCDPG
Trigger: ACCAGGATCGCAGTGCTCTCAAAGACACGTACATGT...AAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp AGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RRAPNSLPENTLHSPLSCTCTCL*EHCDPG
Trigger: ACCAGGATCGCAGTGCTCTCAAAGACACGTACATGT...GCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGTCGGGCAAACCTTCTaGTGCTACCCCCACTGGATG +
Preference number: 4 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFVGQTF*CYPHWM
Trigger: CATCCAGTGGGGGTAGCAGCAGAAGGTTTGCCCGAC...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR GCA 90 bp CCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACGGGCCCCCAACTCATTaGCTGAAAACACCCTCCATT +
Preference number: 4 (lower is better)
Translates to: PSFKAMARKILEETVLDNGPPTH*LKTPSI
Trigger: AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCC...GTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp CCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGGTGAAGGTGATCATAGTTCCTTCTTCAGCTaGTCAGGATCACTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PTGAHGGHASISKGEGDHSSFFS*SGSLFP
Trigger: TGGGAACAGTGATCCTGAGCAGCTGAAGAAGGAACT...ATGATCACCTTCACCTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGCTACCCCCACTGGATaGATGAGCTCGGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTATPTG*MSSGVK
Trigger: TTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp TCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACACCCCCACTGGATGGATaGGCTCGGGCGTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: SCFSATASLSASGSLAKTPPLDG*ARASKL
Trigger: CAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGG...TGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp AAAGCCACCAGCCCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTTATCGTGAGGAGAAATaGTCTGAGCTCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: KATSPGGPPTHCLKTPSIYREEK*SELHYP
Trigger: GGGATAATGGAGCTCAGATCATTTCTCCTCACGATA...AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGGGCTGGTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGACTGCACAAAGCTATaGCCCACCCCATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTDCTKL*PTPWTE
Trigger: CTCTGTCCATGGGGTGGGTCATAGCTTTGTGCAGTC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp CTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGCTGGAAAAGCTCTGTCCCACTGGTaGGCATGGTGGCCACGCCTC +
Preference number: 4 (lower is better)
Translates to: LDYFSLLLAADCTSVAGKALSHW*AWWPRL
Trigger: GAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGC...TTTTCCAGCCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp CCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACTGGAGGAGACGGTGCTaGACAACATGTACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PSFKAMARKILEETVLDNWRRRC*TTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA...GTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACTGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FKAMARKILEETVLDNMYWPARF*RRRCWT
Trigger: TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCA...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp GATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCACTGTTCCCAGGTaGGGCACACAGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: DFGGDGAGQHVRVFESTAITVPR*GTQLCI
Trigger: TATGCAGAGCTGTGTGCCCCACCTGGGAACAGTGAT...CGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR TCA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACCTCGGGCGTCAAAACTaGTCACGATGCCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FKAMARKILEETVLDNMYLGRQN*SRCLSA
Trigger: AGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAG...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGCCCCAACTCATTGCCTaGAAACACCCTCCATTCACC +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTPQLIA*KHPPFT
Trigger: GGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGG...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGGGCCCCCAACTCATTaGCTGAAAACACCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTGPPTH*LKTPSI
Trigger: AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTCACTGGGCGGTCTCCTaGTCCAGCCGGGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSHWAVS*SSRASS
Trigger: CGAGGACGCCCGGCTGGACCAGGAGACCGCCCAGTG...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp ATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTATCACTGGGCGGTCTCCTaGTCCAGCCGGGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IPIDLITIILLWIVRCSYHWAVS*SSRASS
Trigger: CGAGGACGCCCGGCTGGACCAGGAGACCGCCCAGTG...ATAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp AACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACATGGAGGAGACGGTGCTaGACAACATGTACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NLPLRQWPARFWRRRCWTWRRRC*TTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA...TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp AGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCGGTCTATTAGCTGTTTaGCTCTGTTTCCCATCCACT +
Preference number: 4 (lower is better)
Translates to: RRAPNSLPENTLHSPLSCGLLAV*LCFPST
Trigger: AGTGGATGGGAAACAGAGCCAAACAGCTAATAGACC...GCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp AACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCACTCGGGCGTCAAAACTaGTCACGATGCCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NTLHSPLSCFSATASLSALGRQN*SRCLSA
Trigger: AGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAG...TGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGCCTCGCCTAGACCGCTaGCTTCTGGAGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILPRLDR*LLEPPS
Trigger: CGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGG...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp TTATTGATGGAAGCACTCGGATTGTGGAGAAGTGGACTGCTATCAATTAAAGAACCTCGCCTAGACCGCTaGCTTCTGGAGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: LLMEALGLWRSGLLSIKEPRLDR*LLEPPS
Trigger: CGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGG...TTCTTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp ATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGCTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILGSVPLVRMVATPPLAKLWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...CTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR GCA 90 bp GGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCATTCACCACTGTCTTaGTTTTCTGCCACAGCAAGT +
Preference number: 4 (lower is better)
Translates to: GDGAGQHVRVFESTAILVHSPLS*FSATAS
Trigger: ACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATG...AACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp CAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGGAAACTTTTGGAGGAGACGGTaGTGGACAACATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: QRCAQTSPLSPCSRSCGNFWRRR*WTTCTC
Trigger: ACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAA...GTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR GCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACAAGTTCCTTCTTCAGCTaGTCAGGATCACTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTSSFFS*SGSLFP
Trigger: TGGGAACAGTGATCCTGAGCAGCTGAAGAAGGAACT...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTTCCCAGCGCAGCCACTaGGCGGTCTCCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSSQRSH*AVSWSS
Trigger: GCTGGACCAGGAGACCGCCCAGTGGCTGCGCTGGGA...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp AGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCTACCCCCACTGGATaGATGAGCTCGGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: SLSASGSLAKTILALVLSATPTG*MSSGVK
Trigger: TTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGC...TGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp CCAGCACAAAGTTTCAAATGTGATACTGTGAAGGGCCTTAGAATTAACTGGCTGTGCTGCTACCCCCACTaGATGGATGAGCTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: PAQSFKCDTVKGLRINWLCCYPH*MDELGR
Trigger: ACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAGCA...CAGCCAGTTAATTCTAAGGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp AACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAGAAGCACTCGGATTGTaGAGAAGTGGACTGCTATCA +
Preference number: 4 (lower is better)
Translates to: NLPLRQWPARFWRRRCWTEALGL*RSGLLS
Trigger: TGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTC...TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp CCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTCGGGTATTTCACTGTTaGAAACTCAGGATCCGGATC +
Preference number: 4 (lower is better)
Translates to: PLSCFSATASLSASGSLARVFHC*KLRIRI
Trigger: GATCCGGATCCTGAGTTTCCAACAGTGAAATACCCG...AGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
3UTR CAA 72 bp TTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTaGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LEETVLDNMYVS*RALRSWFFSFQ
Trigger: TTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGGAATCGTCCCAAGCTTaGGGCCACGGTTCTAGATTT +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQESSQA*GHGSRF
Trigger: AAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTC...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp AGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGACTGCACAAAGCTATaGCCCACCCCATGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SLSASGSLAKTILALVLSDCTKL*PTPWTE
Trigger: CTCTGTCCATGGGGTGGGTCATAGCTTTGTGCAGTC...TGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp TCTTCGGGATTCGGGTATTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTCCCCAACTCATTGCCTaGAAACACCCTCCATTCACC +
Preference number: 4 (lower is better)
Translates to: SSGFGYFTVGNSGSGSFCPQLIA*KHPPFT
Trigger: GGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGG...ACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp TCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGAACAAGGTCAAAAACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SGSGSFCSGTASGGTRSKTCTCL*EHCDPG
Trigger: ACCAGGATCGCAGTGCTCTCAAAGACACGTACATGT...TTTTGACCTTGTTCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR GCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTCCTCGCCTAGACCGCTaGCTTCTGGAGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSPRLDR*LLEPPS
Trigger: CGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGG...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp AACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACTGATAAATGTGGTTaGAGCAAGTCGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: NLPLRQWPARFWRRRCWTTDKCG*SKSGKP
Trigger: AGGTTTGCCCGACTTGCTGCAACCACATTTATCAGT...TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR GCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACACATTCACCACTGTCTTaGTTTTCTGCCACAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTHSPLS*FSATAS
Trigger: ACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATG...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAGCTCTGTCCCACTGGTaGGCATGGTGGCCACGCCTC +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTALSHW*AWWPRL
Trigger: GAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGC...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGCTCATAGGTCTTGCTaGCTCCAAACCAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTAHRSC*LQTRNY
Trigger: GTAATTCCTGGTTTGGAGGCAGCAAGACCTATGAGC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGCTTGCTCATAGGTCTTaGTGCCTCCAAACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTLAHRS*CLQTRN
Trigger: ATTCCTGGTTTGGAGGCAGCAAGACCTATGAGCAAG...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp GAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCAAGCCTCCATTCCAATaGTTTCAATGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: ETVLDNMYVSLRALRSWFKPPFQ*FQCFYH
Trigger: GTGGTAGAAGCATTGAAAGCATTGGAATGGAGGCTT...GAACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp GCTGTAAATCATCTGAGATGTCAATTTTGGAGTAGGACAGTTCGACATTCAACCTGCTGCTACCCCCACTaGATGGATGAGCTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: AVNHLRCQFWSRTVRHSTCCYPH*MDELGR
Trigger: ACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAGCA...GGTTGAATGTCGAACTGTCCTACTCCAAAATTGACATCTCAGATGATTTACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGCGGGTATTTCACTGTTaGAAACTCAGGATCCGGATC +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTRVFHC*KLRIRI
Trigger: GATCCGGATCCTGAGTTTCCAACAGTGAAATACCCG...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp ATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGATTTTAGTCTGCTTTTaGCTGCAGATTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: ILGSVPLVRMVATPPLAKILVCF*LQIVLL
Trigger: CAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAAT...CTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp GTACTTGATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAAGTATACCCAAGGCTaGACTATTTTAGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VLDFGLCPTGAHGGHASIKYTQG*TILVCF
Trigger: AAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTT...AATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAATCAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp CCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATTCAACCTGAGTGCTaGAGAGGCAAAATAAACCGT +
Preference number: 4 (lower is better)
Translates to: PSFKAMARKILEETVLDNIQPEC*RGKINR
Trigger: ACGGTTTATTTTGCCTCTCCAGCACTCAGGTTGAAT...GTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
3UTR CAA 72 bp CACCTTTCCCCTCTTCGGGATTCGGGTATTTCACTGTaGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HLSPLRDSGISL*ETQDPDLSVQE
Trigger: TTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGAATCCCGAAGAGGGGAAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACATGGAGCCGCCATCGCTaGGCTTGTGCTACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTWSRHR*ACATAA
Trigger: TGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCA...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp GCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AMARKILEETVLDNMYVSEMQLS*FQHKVS
Trigger: TGAAACTTTGTGCTGGAATCATGATAACTGCATCTC...AGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp GGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTTCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 4 (lower is better)
Translates to: GDGAGQHVRVFESTAILVSCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...AACCAGGATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGAAAAGCCTTGAAAGCTaGCTGCACAAAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTKSLES*LHKAMT
Trigger: GGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTT...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACAAAAGCCTTGAAAGCTaGCTGCACAAAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: FKAMARKILEETVLDNMYKSLES*LHKAMT
Trigger: GGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTT...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp ATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTACCCCAACTCATTGCCTaGAAACACCCTCCATTCACC +
Preference number: 4 (lower is better)
Translates to: MYVSLRALRSWFFSFQDVPQLIA*KHPPFT
Trigger: GGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGG...TACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp AGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCACCCCAACTCATTGCCTaGAAACACCCTCCATTCACC +
Preference number: 4 (lower is better)
Translates to: SLSASGSLAKTILALVLSPQLIA*KHPPFT
Trigger: GGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGG...TGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGAGCTTGTGCTACCGCTaGAGAGGGAAGCAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILSLCYR*RGKQAV
Trigger: CACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCT...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTGTCGGGCAAACCTTCTaGTGCTACCCCCACTGGATG +
Preference number: 4 (lower is better)
Translates to: WSISCLALFPIHLKPVNVVGQTF*CYPHWM
Trigger: CATCCAGTGGGGGTAGCAGCAGAAGGTTTGCCCGAC...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR GCA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTACTGATAAATGTGGTTaGAGCAAGTCGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFTDKCG*SKSGKP
Trigger: AGGTTTGCCCGACTTGCTGCAACCACATTTATCAGT...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR GCA 90 bp AGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGGGCCCCCAACTCATTaGCTGAAAACACCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SLSASGSLAKTILALVLSGPPTH*LKTPSI
Trigger: AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCC...TGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCCCTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSASGSLAKTILALVLSALPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...GGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCGGTCTATTAGCTGTTTaGCTCTGTTTCCCATCCACT +
Preference number: 4 (lower is better)
Translates to: SATASLSASGSLAKTILAGLLAV*LCFPST
Trigger: AGTGGATGGGAAACAGAGCCAAACAGCTAATAGACC...GGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp CATGGACAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: HGQRCAQTSPLSPCSRSCEMQLS*FQHKVS
Trigger: TGAAACTTTGTGCTGGAATCATGATAACTGCATCTC...ACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTGTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 4 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTSCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp CATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTTTTTGGAGGAGACGGTaGTGGACAACATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: HVRVFESTAILVLLFPRCFWRRR*WTTCTC
Trigger: ACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAA...ACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp ACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGTGGGGCACACAGCTCTaGATAGTACTTGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: TQGWTILVCFWLQIVLLWWGTQL*IVLDFG
Trigger: CCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCA...CCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR GCA 90 bp TTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTTGGGGCACACAGCTCTaGATAGTACTTGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: FPWSISCLALFPIHLKPVWGTQL*IVLDFG
Trigger: CCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCA...AACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR GCA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACTTCCAATGCTTTCAATaGTTCTACCACAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FKAMARKILEETVLDNMYFQCFQ*FYHKGG
Trigger: ACCCCCTTTGTGGTAGAAGCATTGAAAGCATTGGAA...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACATGCTGCTACCCCCACTaGATGGATGAGCTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTCCYPH*MDELGR
Trigger: ACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAGCA...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp GGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: GPQDFGGDGAGQHVRVFETIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...CTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp CCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAACAATTCTGGCCTTaGTTTTGTCAGCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PLSCFSATASLSASGSLAKQFWP*FCQPKQ
Trigger: TTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTT...AGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGGGTCTATTAGCTGTTTaGCTCTGTTTCCCATCCACT +
Preference number: 4 (lower is better)
Translates to: FHCWKLRIRIFLFRNSLRGLLAV*LCFPST
Trigger: AGTGGATGGGAAACAGAGCCAAACAGCTAATAGACC...CCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CCA 90 bp GTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGATCACTGTTCCCAGGTaGGGCACACAGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: VGKCKYTQGWTILVCFWLITVPR*GTQLCI
Trigger: TATGCAGAGCTGTGTGCCCCACCTGGGAACAGTGAT...CAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGCAACTGGAGTTATTTTaGAAGGCTGTAAGACCACGA +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTQLELF*KAVRPR
Trigger: TCGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTG...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTACCACAAAGGGGGTTaGCGTTATATCAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SATASLSASGSLAKTILAYHKGG*RYIRKE
Trigger: CTCTTTTCTGATATAACGCCAACCCCCTTTGTGGTA...GGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp ACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGAAACCGTGTTTCACTGTaGATCTTTGAATCCCAATCC +
Preference number: 4 (lower is better)
Translates to: TVGNSGSGSFCSGTASGGNRVSL*IFESQS
Trigger: GGATTGGGATTCAAAGATCCACAGTGAAACACGGTT...TCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR TCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATCTGCTTTAAGTCACTaGATTGTTTTTCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTSALSH*IVFPGI
Trigger: GATACCTGGAAAAACAATTCAGTGACTTAAAGCAGA...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp TCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACATACACAGGAATCCCCTaGCTGATAAATGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SCFSATASLSASGSLAKTYTGIP*LINVVA
Trigger: TGCAACCACATTTATCAGTCAGGGGATTCCTGTGTA...TGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTEMQLS*FQHKVS
Trigger: TGAAACTTTGTGCTGGAATCATGATAACTGCATCTC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGTCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 4 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTSCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp TCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACAAAAAGCCTTGAAAGCTaGCTGCACAAAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: SCFSATASLSASGSLAKTKSLES*LHKAMT
Trigger: GGTCATAGCTTTGTGCAGTCAGCTTTCAAGGCTTTT...TGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR GCA 90 bp CTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACAATCACGATGCCTTTCTaGTTTAAGTCACTGAATTGT +
Preference number: 4 (lower is better)
Translates to: LPLRQWPARFWRRRCWTTITMPF*FKSLNC
Trigger: ACAATTCAGTGACTTAAAGCAGAAAGGCATCGTGAT...TGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR GCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTGTCGGGCAAACCTTCTaGTGCTACCCCCACTGGATG +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSVGQTF*CYPHWM
Trigger: CATCCAGTGGGGGTAGCAGCAGAAGGTTTGCCCGAC...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp GATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAGCACTGCGTGTGGAGAAGTGGACTaGTATCAATTAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: DFGGDGAGQHVRVFESTACGEVD*YQLKNR
Trigger: ACGATTCTTTAATTGATAGCAGTCCACTTCTCCACA...CGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACACATTCACCACTGTCTTaGTTTTCTGCCACAGCAAGT +
Preference number: 4 (lower is better)
Translates to: NSLPENTLHSPLSCFSATHSPLS*FSATAS
Trigger: ACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATG...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAATTTTGGAGGAGACGGTaGTGGACAACATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: VRVFESTAILVLLFPRCKFWRRR*WTTCTC
Trigger: ACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAA...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGAAGCCTCCATTCCAATaGTTTCAATGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQKPPFQ*FQCFYH
Trigger: GTGGTAGAAGCATTGAAAGCATTGGAATGGAGGCTT...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGAATCCCTGTGTAGTCTaGATGATGGTCAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQNPCVV*MMVKSF
Trigger: GAATGACTTGACCATCATCCAGACTACACAGGGATT...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAAGAAGCACTCGGATTGTaGAGAAGTGGACTGCTATCA +
Preference number: 4 (lower is better)
Translates to: VRVFESTAILVLLFPRCKEALGL*RSGLLS
Trigger: TGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTC...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp AGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGAAGCACTCGGATTGTaGAGAAGTGGACTGCTATCA +
Preference number: 4 (lower is better)
Translates to: SLSASGSLAKTILALVLSEALGL*RSGLLS
Trigger: TGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTC...TGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCCCTGTTCACGCTCCTGTaGAAACAGTACTTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: LSASGSLAKTILALVLSALFTLL*KQYFLR
Trigger: CCTTAAAAAGTACTGTTTCCACAGGAGCGTGAACAG...GGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CCA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAACGGGTATTTCACTGTTaGAAACTCAGGATCCGGATC +
Preference number: 4 (lower is better)
Translates to: VRVFESTAILVLLFPRCKRVFHC*KLRIRI
Trigger: GATCCGGATCCTGAGTTTCCAACAGTGAAATACCCG...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CCA 90 bp AGCTTAATTGTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCTGCTGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: SLIVGKCKYTQGWTILVCWPARF*RRRCWT
Trigger: TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCA...GCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTACAATTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp GTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGGAAACAGTACCATACTCCACATAAATaGCCTTTAGTTGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: VCTNFTFVSLFTLLWKQYHTPHK*PLVAET
Trigger: TGTCTCAGCAACTAAAGGCCATTTATGTGGAGTATG...GTACTGTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CCA 90 bp CAGAGGTGTGCACAAACTTCACCTTTGTCTCCCTGTTCACGCTCCTGTGGAAACAAGTATACCCAAGGCTaGACTATTTTAGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QRCAQTSPLSPCSRSCGNKYTQG*TILVCF
Trigger: AAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTT...GTTTCCACAGGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGCACACCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR TCA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTTCTGCTTTAAGTCACTaGATTGTTTTTCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFSALSH*IVFPGI
Trigger: GATACCTGGAAAAACAATTCAGTGACTTAAAGCAGA...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp TCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCATCCTGCTTTGGATTGTaGGATGCAGTTATCATGATT +
Preference number: 4 (lower is better)
Translates to: SLPENTLHSPLSCFSATASCFGL*DAVIMI
Trigger: AATCATGATAACTGCATCTCACAATCCAAAGCAGGA...TGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp GGGTATTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCCAAAGTAGTCATTATTaGTGGAAGCACTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: GYFTVGNSGSGSFCSGTAQSSHY*WKHSDC
Trigger: ACAATCCGAGTGCTTCCATCAATAATGACTACTTTG...GGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAAGTAGTCATTATTaGTGGAAGCACTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQQSSHY*WKHSDC
Trigger: ACAATCCGAGTGCTTCCATCAATAATGACTACTTTG...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGTTCACTGTGGATCTTTaGATCCCAATCCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQFTVDL*IPIQTF
Trigger: AAAGGTTTGGATTGGGATTCAAAGATCCACAGTGAA...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR GCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQLWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp TCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACAGACATTCAACCTGAGTaGTGGAGAGGCAAAATAAAC +
Preference number: 4 (lower is better)
Translates to: SCFSATASLSASGSLAKTDIQPE*WRGKIN
Trigger: GTTTATTTTGCCTCTCCAGCACTCAGGTTGAATGTC...TGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CCA 90 bp CATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAATCCCTGTGTAGTCTaGATGATGGTCAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: HVRVFESTAILVLLFPRCNPCVV*MMVKSF
Trigger: GAATGACTTGACCATCATCCAGACTACACAGGGATT...ACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTTGGAGGAGACGGTGCTaGACAACATGTACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: WSISCLALFPIHLKPVNVWRRRC*TTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTTGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSWPARF*RRRCWT
Trigger: TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCA...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp TATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTATGGCCCGCAAGATTTTaGAGGAGACGGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: YPNRPYNHYPALDCEMQLWPARF*RRRCWT
Trigger: TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCA...TAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TATACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGCTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YTQGWTILVCFWLQIVLLLPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...CAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGATCACTGTTCCCAGGTaGGGCACACAGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILITVPR*GTQLCI
Trigger: TATGCAGAGCTGTGTGCCCCACCTGGGAACAGTGAT...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
3UTR CAA 72 bp TCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGACAAAGTCTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SGSLAKTILALV*SAKAKDKVCGN
Trigger: GTTTCCACAGACTTTGTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515668.5
3UTR CAA 72 bp TCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGACAAAGTCAAGACACCT +
Preference number: 4 (lower is better)
Translates to: SGSLAKTILALV*SAKAKDKVKTP
Trigger: AGGTGTCTTGACTTTGTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR TCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACACTCGGGCGTCAAAACTaGTCACGATGCCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTLGRQN*SRCLSA
Trigger: AGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAG...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp CCAGCACAAAGTTTCAAATGTGATACTGTGAAGGGCCTTAGAATTAACTGGCTGTACACAGGAATCCCCTaGCTGATAAATGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PAQSFKCDTVKGLRINWLYTGIP*LINVVA
Trigger: TGCAACCACATTTATCAGTCAGGGGATTCCTGTGTA...CAGCCAGTTAATTCTAAGGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp GTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGTATCGTGAGGAGAAATaGTCTGAGCTCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: VGKCKYTQGWTILVCFWLYREEK*SELHYP
Trigger: GGGATAATGGAGCTCAGATCATTTCTCCTCACGATA...CAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR TCA 90 bp GTTATCATGATTCCAGCACAAAGTTTCAAATGTGATACTGTGAAGGGCCTTAGAGAATCGTCCCAAGCTTaGGGCCACGGTTCTAGATTT +
Preference number: 4 (lower is better)
Translates to: VIMIPAQSFKCDTVKGLRESSQA*GHGSRF
Trigger: AAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTC...TCTAAGGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGGAATCATGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp AAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGATGGCCTTTAGTTGCTaGGACAAAGACAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: KTPSIHHCLAFLPQQVYQMAFSC*DKDKFL
Trigger: CAAGAATTTGTCTTTGTCTCAGCAACTAAAGGCCAT...CTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR TCA 90 bp CCAATCCAAACCTTTTCCTTTTGCCTTGCAGCCAATTCCTTAATGTTCATGATCGTTCGACATTCAACCTaGGTGCTGGAGAGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: PIQTFSFCLAANSLMFMIVRHST*VLERQN
Trigger: ATTTTGCCTCTCCAGCACTCAGGTTGAATGTCGAAC...GATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR GCA 90 bp TCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCATGTGGAGAAGTGGACTaGTATCAATTAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: SLPENTLHSPLSCFSATACGEVD*YQLKNR
Trigger: ACGATTCTTTAATTGATAGCAGTCCACTTCTCCACA...TGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGTGTGGAGAAGTGGACTaGTATCAATTAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQCGEVD*YQLKNR
Trigger: ACGATTCTTTAATTGATAGCAGTCCACTTCTCCACA...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGCTAGCCAACTCTaGACTTATGACAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILEASQL*TYDSGT
Trigger: AGTGCCGCTGTCATAAGTGCAGAGTTGGCTAGCTTC...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCCTGGACTATTTTAGTCTaGTTTTGGCTGCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: LSASGSLAKTILALVLSAWTILV*FWLQIV
Trigger: TACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCA...GGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR GCA 90 bp TCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACACAAACCTTTTCCTTTTaGCTTGCAGCCAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: SCFSATASLSASGSLAKTQTFSF*LAANSL
Trigger: TAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTG...TGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGAAAAGCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGTGGAGGAGACGGTGCTaGACAACATGTACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILWRRRC*TTCTCL
Trigger: AAGACACGTACATGTTGTCCAGCACCGTCTCCTCCA...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp GTATACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGGTCTATTAGCTGTTTaGCTCTGTTTCCCATCCACT +
Preference number: 4 (lower is better)
Translates to: VYPRLDYFSLLLAADCTSGLLAV*LCFPST
Trigger: AGTGGATGGGAAACAGAGCCAAACAGCTAATAGACC...AGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp AGCGGCACTGACTCCATCTTTGTCCAGAACAAAAGGGCAGCACATGTATCCAATATTTTAGTCTGCTTTTaGCTGCAGATTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: SGTDSIFVQNKRAAHVSNILVCF*LQIVLL
Trigger: CAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAAT...ATTGGATACATGTGCTGCCCTTTTGTTCTGGACAAAGATGGAGTCAGTGCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CCA 90 bp TCGGATTGTGGAGAAGTGGACTGCTATCAATTAAAGAATCGTCCCAAGCTTGAGGGCCTTAGAATTAACTaGCTGCTCATAATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SDCGEVDCYQLKNRPKLEGLRIN*LLIIPG
Trigger: TCCTGGAATTATGAGCAGCCAGTTAATTCTAAGGCC...CTCAAGCTTGGGACGATTCTTTAATTGATAGCAGTCCACTTCTCCACAATCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTGAATCGTCCCAAGCTTaGGGCCACGGTTCTAGATTT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSESSQA*GHGSRF
Trigger: AAATCTAGAACCGTGGCCTCAAGCTTGGGACGATTC...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR TCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTACATGTACGTGTCTTTaGGAGCACTGCGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSTCTCL*EHCDPG
Trigger: ACCAGGATCGCAGTGCTCTCAAAGACACGTACATGT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAACTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRVFESTAILVLLFPRCKLWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGTGGGGCACACAGCTCTaGATAGTACTTGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILWGTQL*IVLDFG
Trigger: CCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCA...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGCACTCGGATTGTaGAGAAGTGGACTGCTATCA +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILEALGL*RSGLLS
Trigger: TGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTC...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGCTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILLPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TTATTGATGGAAGCACTCGGATTGTGGAGAAGTGGACTGCTATCAATTAAAGAACTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLMEALGLWRSGLLSIKELPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...TTCTTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGTCATGGGTGCCCAACTaGAGTTATTTTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILSWVPN*SYFGRL
Trigger: CAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGA...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp CCAGCACAAAGTTTCAAATGTGATACTGTGAAGGGCCTTAGAATTAACTGGCTGCTTCAAACACAACGATaGTCTAAGCCTCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: PAQSFKCDTVKGLRINWLLQTQR*SKPPFQ
Trigger: TTGGAATGGAGGCTTAGACCATCGTTGTGTTTGAAG...CAGCCAGTTAATTCTAAGGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp TTATTGATGGAAGCACTCGGATTGTGGAGAAGTGGACTGCTATCAATTAAAGAATATCGTGAGGAGAAATaGTCTGAGCTCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: LLMEALGLWRSGLLSIKEYREEK*SELHYP
Trigger: GGGATAATGGAGCTCAGATCATTTCTCCTCACGATA...TTCTTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAAACAAAGTTTCAAATGTaGTACTGTGTAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: VRVFESTAILVLLFPRCKTKFQM*YCVVWM
Trigger: CATCCAGACTACACAGTATCACATTTGAAACTTTGT...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR GCA 90 bp TTCTGGCCTTGGTTTTGTCAGCCAAAGCAAAAGACAAAGTCAAGACACCTTTCCATCACGATGCCTTTCTaGTTTAAGTCACTGAATTGT +
Preference number: 4 (lower is better)
Translates to: FWPWFCQPKQKTKSRHLSITMPF*FKSLNC
Trigger: ACAATTCAGTGACTTAAAGCAGAAAGGCATCGTGAT...GGAAAGGTGTCTTGACTTTGTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR GCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTTTTTGGAGGAGACGGTaGTGGACAACATGTACGTGT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSFWRRR*WTTCTC
Trigger: ACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAA...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAAGTTCCTTCTTCAGCTaGTCAGGATCACTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTSSFFS*SGSLFP
Trigger: TGGGAACAGTGATCCTGAGCAGCTGAAGAAGGAACT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGATCCTAGCTCATGGGTaGCCAACTGGAGTTATTTTG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILILAHG*PTGVIL
Trigger: CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAGGGCACAAAGGGGGTTaGCGTTATATCAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTGHKGG*RYIRKE
Trigger: CTCTTTTCTGATATAACGCCAACCCCCTTTGTGCCC...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTCTGTTCACGCTCCTGTaGAAACAGTACTTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: WSISCLALFPIHLKPVNVLFTLL*KQYFLR
Trigger: CCTTAAAAAGTACTGTTTCCACAGGAGCGTGAACAG...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CCA 90 bp TATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTACTTCCTTTAAGGCAATaGCCCGCAAGATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YPNRPYNHYPALDCEMQLLPLRQ*PARFWR
Trigger: CCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAG...TAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp GCTGTAAATCATCTGAGATGTCAATTTTGGAGTAGGACAGTTCGACATTCAACCTACCACAAAGGGGGTTaGCGTTATATCAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: AVNHLRCQFWSRTVRHSTYHKGG*RYIRKE
Trigger: CTCTTTTCTGATATAACGCCAACCCCCTTTGTGGTA...GGTTGAATGTCGAACTGTCCTACTCCAAAATTGACATCTCAGATGATTTACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CCA 90 bp CCCAATCCAAACCTTTTCCTTTTGCCTTGCAGCCAATTCCTTAATGTTCATGATCTTCAAACACAACGATaGTCTAAGCCTCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: PNPNLFLLPCSQFLNVHDLQTQR*SKPPFQ
Trigger: TTGGAATGGAGGCTTAGACCATCGTTGTGTTTGAAG...ATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CCA 90 bp TCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTTCCGGCCTTAGAATTAACTaGCTGCTCATAATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SISCLALFPIHLKPVNVSGLRIN*LLIIPG
Trigger: TCCTGGAATTATGAGCAGCCAGTTAATTCTAAGGCC...GGAAACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR TCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTTACACAGGAATCCCCTaGCTGATAAATGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSYTGIP*LINVVA
Trigger: TGCAACCACATTTATCAGTCAGGGGATTCCTGTGTA...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: WSISCLALFPIHLKPVNVEMQLS*FQHKVS
Trigger: TGAAACTTTGTGCTGGAATCATGATAACTGCATCTC...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTTATCGTGAGGAGAAATaGTCTGAGCTCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSYREEK*SELHYP
Trigger: GGGATAATGGAGCTCAGATCATTTCTCCTCACGATA...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR TCA 90 bp CCCAATCCAAACCTTTTCCTTTTGCCTTGCAGCCAATTCCTTAATGTTCATGATCAAAGTAGTCATTATTaGTGGAAGCACTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: PNPNLFLLPCSQFLNVHDQSSHY*WKHSDC
Trigger: ACAATCCGAGTGCTTCCATCAATAATGACTACTTTG...ATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR GCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTACTGATAAATGTGGTTaGAGCAAGTCGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSTDKCG*SKSGKP
Trigger: AGGTTTGCCCGACTTGCTGCAACCACATTTATCAGT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTCATTCACCACTGTCTTaGTTTTCTGCCACAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSHSPLS*FSATAS
Trigger: ACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATG...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp GTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGTGGACTATTTTAGTCTaGTTTTGGCTGCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: VGKCKYTQGWTILVCFWLWTILV*FWLQIV
Trigger: TACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCA...CAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTGGTCTATTAGCTGTTTaGCTCTGTTTCCCATCCACT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSGLLAV*LCFPST
Trigger: AGTGGATGGGAAACAGAGCCAAACAGCTAATAGACC...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACATTTGATCCTAGCTCATaGGTGCCCAACTGGAGTTAT +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTFDPSS*VPNWSY
Trigger: ATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAA...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
3UTR CAA 72 bp TGTGGATCTTTGAATCCCAATCCAAACCTTTTCCTTTaGCCTTGCAGCCAATTCCTTAATGTTCATGATCAC +
Preference number: 4 (lower is better)
Translates to: CGSLNPNPNLFL*PCSQFLNVHDH
Trigger: GTGATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGGGATTCAAAGATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR TCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGCAAAGTAGTCATTATTaGTGGAAGCACTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILQSSHY*WKHSDC
Trigger: ACAATCCGAGTGCTTCCATCAATAATGACTACTTTG...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp TATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTATTCCAATGCTTTCAATaGTTCTACCACAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: YPNRPYNHYPALDCEMQLFQCFQ*FYHKGG
Trigger: ACCCCCTTTGTGGTAGAAGCATTGAAAGCATTGGAA...TAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTAATCCCTGTGTAGTCTaGATGATGGTCAAGTCATTC +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSNPCVV*MMVKSF
Trigger: GAATGACTTGACCATCATCCAGACTACACAGGGATT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACACTGTTCACGCTCCTGTaGAAACAGTACTTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTLFTLL*KQYFLR
Trigger: CCTTAAAAAGTACTGTTTCCACAGGAGCGTGAACAG...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp AGCTCCATTATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGAAAACAATTCTGGCCTTaGTTTTGTCAGCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSIIPIDLITIILLWIVRKQFWP*FCQPKQ
Trigger: TTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTT...TCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATAATGGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR TCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGTCTGCTTTAAGTCACTaGATTGTTTTTCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILSALSH*IVFPGI
Trigger: GATACCTGGAAAAACAATTCAGTGACTTAAAGCAGA...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR TCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTATGGCCTTTAGTTGCTaGGACAAAGACAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSMAFSC*DKDKFL
Trigger: CAAGAATTTGTCTTTGTCTCAGCAACTAAAGGCCAT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACACTTTGGATTGTGAGATaGAGTTATCATGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTLWIVR*SYHDSS
Trigger: GCTGGAATCATGATAACTGCATCTCACAATCCAAAG...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp TCATTATTGATGGAAGCACTCGGATTGTGGAGAAGTGGACTGCTATCAATTAAAACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SLLMEALGLWRSGLLSIKTIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...TTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAAAACAATTCTGGCCTTaGTTTTGTCAGCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTKQFWP*FCQPKQ
Trigger: TTGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTCATACTCCACATAAATaGCCTTTAGTTGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSHTPHK*PLVAET
Trigger: TGTCTCAGCAACTAAAGGCCATTTATGTGGAGTATG...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGATTTTAGTCTGCTTTTaGCTGCAGATTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: VYKESLILAHGCPTGVILILVCF*LQIVLL
Trigger: CAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAAT...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAATCACGATGCCTTTCTaGTTTAAGTCACTGAATTGT +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTITMPF*FKSLNC
Trigger: ACAATTCAGTGACTTAAAGCAGAAAGGCATCGTGAT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR GCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTTGTGGAGAAGTGGACTaGTATCAATTAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSCGEVD*YQLKNR
Trigger: ACGATTCTTTAATTGATAGCAGTCCACTTCTCCACA...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR GCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACATGGACTATTTTAGTCTaGTTTTGGCTGCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTWTILV*FWLQIV
Trigger: TACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCA...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTTIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CCA 90 bp TATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTAACCATTATCCTGCTTTaGATTGTGAGATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: YPNRPYNHYPALDCEMQLTIILL*IVRCSY
Trigger: ATAACTGCATCTCACAATCCAAAGCAGGATAATGGT...TAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CCA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTAAGTATACCCAAGGCTaGACTATTTTAGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSKYTQG*TILVCF
Trigger: AAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS GCA 90 bp GACCGCTGCCTTCTGGAGCCGCCATCGCTGAGCTTGTGCTACCGCTaGAGAGGGAAGCAGGCGGTGAGATCTGCCTTCCGGCCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: DRCLLEPPSLSLCYR*RGKQAVRSAFRPGP
Trigger: GGGGCCGGGCCGGAAGGCAGATCTCACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625312.2
CDS GCA 90 bp ACTGGGCGGTCTCCTGGTCCAGCCGGGCGTCCTCGCCTAGACCGCTaGCTTCTGGAGCCGCCATCGCTGAGCTTGTGCTACCGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TGRSPGPAGRPRLDR*LLEPPSLSLCYRCR
Trigger: TCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGGACGCCCGGCTGGACCAGGAGACCGCCCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000625312.2
CDS GCA 90 bp CCTCGCCTAGACCGCTGCCTTCTGGAGCCGCCATCGCTGAGCTTGTaGTACCGCTGCAGAGGGAAGCAGGCGGTGAGATCTGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PRLDRCLLEPPSLSL*YRCRGKQAVRSAFR
Trigger: CCGGAAGGCAGATCTCACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625312.2
CDS-3UTR CAA 90 bp GTACTTGATTTTGGGCTCTGTCCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGGGCCCCCAACTCATaGCCTGAAAACACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VLDFGLCPTGAHGGHASIRAPNS*PENTLH
Trigger: ATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCT...AATGGAGGCGTGGCCACCATGCGCACCAGTGGGACAGAGCCCAAAATCAAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS CCA 90 bp GGTTGCAGCAAGTCGGGCAAACCTTCTGCTGCTACCCCCACTGGATaGATGAGCTCGGGCGTCAAAACTGATCACGATGCCTTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GCSKSGKPSAATPTG*MSSGVKTDHDAFLL
Trigger: AAGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAGCAGAAGGTTTGCCCGACTTGCTGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381967.9
ENST00000505986.5
ENST00000515668.5
ENST00000625312.2
CDS TCA 90 bp GCAGCAAGTCGGGCAAACCTTCTGCTGCTACCCCCACTGGATGGATaGGCTCGGGCGTCAAAACTGATCACGATGCCTTTCTGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: AASRANLLLLPPLDG*ARASKLITMPFCFK
Trigger: CTTAAAGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAGCTCATCCATCCAGTGGGGGTAGCAGCAGAAGGTTTGCCCGACTTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381967.9
ENST00000505986.5
ENST00000515668.5
ENST00000625312.2
CDS-3UTR CAA 90 bp AAAGCCACCAGCCCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTTCGGGTATTTCACTGTaGGAAACTCAGGATCCGGAT +
Preference number: 5 (lower is better)
Translates to: KATSPGGPPTHCLKTPSISGISL*ETQDPD
Trigger: ATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGA...AATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGGGCTGGTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CAA 90 bp AACCTTCCTTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAAGGGCCCCCAACTCATaGCCTGAAAACACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: NLPLRQWPARFWRRRCWTRAPNS*PENTLH
Trigger: ATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCT...TGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAAGGAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp CCCACTGGTGCGCATGGTGGCCACGCCTCCATTAGCAAAGGTGAAGGTGATCATTGGTCTATTAGCTGTTaGGCTCTGTTTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: PTGAHGGHASISKGEGDHWSISC*ALFPIH
Trigger: GTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA...ATGATCACCTTCACCTTTGCTAATGGAGGCGTGGCCACCATGCGCACCAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CAA 90 bp GGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTGAGAAAGTTAAGGAATTCTaGTCCCAGCGCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: GPQDFGGDGAGQHVRVFEKVKEF*SQRSHW
Trigger: CCAGTGGCTGCGCTGGGACAAGAATTCCTTAACTTT...CTCAAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp GTTCCCAGGTGGGGCACACAGCTCTGCATAGTACTTGATTTTGGGCTCTGTCCCGGTGAAGGTGATCATTaGGCTGCTTTTACTAGTGGG +
Preference number: 5 (lower is better)
Translates to: VPRWGTQLCIVLDFGLCPGEGDH*AAFTSG
Trigger: CCCACTAGTAAAAGCAGCCAAATGATCACCTTCACC...GGGACAGAGCCCAAAATCAAGTACTATGCAGAGCTGTGTGCCCCACCTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CAA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGCACAAACTTCACCTTaGTCTCCCTGTTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTAQTSP*SPCSRS
Trigger: GGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp CCAGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: PGGPPTHCLKTPSIHHCLILALV*SAKAKD
Trigger: GTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAAT...AAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp AGGAGGGCCCCCAACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCCTACCACAAAGGGGGTaGGCGTTATATCAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: RRAPNSLPENTLHSPLSCLPQRG*ALYQKR
Trigger: TCTTTTCTGATATAACGCCAACCCCCTTTGTGGTAG...GCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CAA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGCCGCCATCGCTGAGCTaGTGCTACCGCTGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: VYKESLILAHGCPTGVILPPSLS*CYRCRG
Trigger: CCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGG...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTATGGAAGCACTCGGATaGTGGAGAAGTGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFMEALG*WRSGLL
Trigger: TAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCAT...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGAACATGTACGTGTCTTaGAGAGCACTGCGATCCTGG +
Preference number: 5 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTNMYVS*RALRSW
Trigger: CCAGGATCGCAGTGCTCTCAAAGACACGTACATGTT...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp TCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCAACATGTACGTGTCTTaGAGAGCACTGCGATCCTGG +
Preference number: 5 (lower is better)
Translates to: SATASLSASGSLAKTILANMYVS*RALRSW
Trigger: CCAGGATCGCAGTGCTCTCAAAGACACGTACATGTT...GGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCCATGGAAGCACTCGGATaGTGGAGAAGTGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: LSASGSLAKTILALVLSAMEALG*WRSGLL
Trigger: TAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCAT...GGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp ACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGGCACAAACTTCACCTTaGTCTCCCTGTTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: TQGWTILVCFWLQIVLLWAQTSP*SPCSRS
Trigger: GGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGC...CCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGTGGTCTATTAGCTGTTaGGCTCTGTTTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTWSISC*ALFPIH
Trigger: GTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGGGTGAAGGTGATCATTaGGCTGCTTTTACTAGTGGG +
Preference number: 5 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTGEGDH*AAFTSG
Trigger: CCCACTAGTAAAAGCAGCCAAATGATCACCTTCACC...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp AAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGATGGAAGCACTCGGATaGTGGAGAAGTGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: KTPSIHHCLAFLPQQVYQMEALG*WRSGLL
Trigger: TAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCAT...CTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp TTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGTGGTCTATTAGCTGTTaGGCTCTGTTTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: FHCWKLRIRIFLFRNSLRWSISC*ALFPIH
Trigger: GTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA...CCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CAA 90 bp ACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGTGGTCTATTAGCTGTTaGGCTCTGTTTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: THCLKTPSIHHCLAFLPQWSISC*ALFPIH
Trigger: GTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA...CTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp AACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCAGGTGAAGGTGATCATTaGGCTGCTTTTACTAGTGGG +
Preference number: 5 (lower is better)
Translates to: NTLHSPLSCFSATASLSAGEGDH*AAFTSG
Trigger: CCCACTAGTAAAAGCAGCCAAATGATCACCTTCACC...TGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp TCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: SLPENTLHSPLSCFSATAILALV*SAKAKD
Trigger: GTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAAT...TGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp ATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGGAAGGCTGTAAGACCACGAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: ILAHGCPTGVILEGCKTTKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...CGTGGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp AATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACGTGTCTTTAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: NGPQDFGGDGAGQHVRVFKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...AAAGACACGTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTAGGGCCCCCAACTCATaGCCTGAAAACACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: WSISCLALFPIHLKPVNVRAPNS*PENTLH
Trigger: ATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCT...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp GGGTATTTCACTGTTGGAAACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCCCAAACCTTTTCCTTTaGCCTTGCAGCCAATTCCTT +
Preference number: 5 (lower is better)
Translates to: GYFTVGNSGSGSFCSGTAPNLFL*PCSQFL
Trigger: AAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGG...GGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGTTTCCAACAGTGAAATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CAA 90 bp TTTAAGGCAATGGCCCGCAAGATTTTGGAGGAGACGGTGCTGGACAACATGTACAACCATTATCCTGCTTaGGATTGTGAGATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: FKAMARKILEETVLDNMYNHYPA*DCEMQL
Trigger: TAACTGCATCTCACAATCCAAAGCAGGATAATGGTT...GTACATGTTGTCCAGCACCGTCTCCTCCAAAATCTTGCGGGCCATTGCCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp TCTGCCACAGCAAGTCTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCAACCATTATCCTGCTTaGGATTGTGAGATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: SATASLSASGSLAKTILANHYPA*DCEMQL
Trigger: TAACTGCATCTCACAATCCAAAGCAGGATAATGGTT...GGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAGACTTGCTGTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp CCAATCCAAACCTTTTCCTTTTGCCTTGCAGCCAATTCCTTAATGTTCATGATCGCACAAACTTCACCTTaGTCTCCCTGTTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: PIQTFSFCLAANSLMFMIAQTSP*SPCSRS
Trigger: GGAGCGTGAACAGGGAGACAAAGGTGAAGTTTGTGC...GATCATGAACATTAAGGAATTGGCTGCAAGGCAAAAGGAAAAGGTTTGGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CAA 90 bp AACTCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAACAAGGTCAAAAGCCTaGAAAGCTGACTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: NSLPENTLHSPLSCFSATTRSKA*KADCTK
Trigger: CTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGT...TGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CAA 90 bp AACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCAAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: NTLHSPLSCFSATASLSAKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...TGCTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp CTGGACTATTTTAGTCTGCTTTTGGCTGCAGATTGTACTTCTGTGGCTGGAAAAAACATGTACGTGTCTTaGAGAGCACTGCGATCCTGG +
Preference number: 5 (lower is better)
Translates to: LDYFSLLLAADCTSVAGKNMYVS*RALRSW
Trigger: CCAGGATCGCAGTGCTCTCAAAGACACGTACATGTT...TTTTCCAGCCACAGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATAGTCCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp CCAGCACAAAGTTTCAAATGTGATACTGTGAAGGGCCTTAGAATTAACTGGCTGAACATGTACGTGTCTTaGAGAGCACTGCGATCCTGG +
Preference number: 5 (lower is better)
Translates to: PAQSFKCDTVKGLRINWLNMYVS*RALRSW
Trigger: CCAGGATCGCAGTGCTCTCAAAGACACGTACATGTT...CAGCCAGTTAATTCTAAGGCCCTTCACAGTATCACATTTGAAACTTTGTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CAA 90 bp ACTCAGGATCCGGATCTTTCTGTTCAGGAACAGCCTCAGGAGGAACAAGGTCAAAGTAGGAATGTTAGTTaGTTGGGTTTGGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: TQDPDLSVQEQPQEEQGQSRNVS*LGLAIF
Trigger: GAAAATGGCCAAACCCAACAAACTAACATTCCTACT...TTGACCTTGTTCCTCCTGAGGCTGTTCCTGAACAGAAAGATCCGGATCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp TCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTTCCAAAGTTAAGGAATTCTaGTCCCAGCGCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: SISCLALFPIHLKPVNVSKVKEF*SQRSHW
Trigger: CCAGTGGCTGCGCTGGGACAAGAATTCCTTAACTTT...GGAAACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp CTATCAGCATCCGGGTCGTTAGCTAAAACAATTCTGGCCTTGGTTTTGTCAGCCAACCATTATCCTGCTTaGGATTGTGAGATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: LSASGSLAKTILALVLSANHYPA*DCEMQL
Trigger: TAACTGCATCTCACAATCCAAAGCAGGATAATGGTT...GGCTGACAAAACCAAGGCCAGAATTGTTTTAGCTAACGACCCGGATGCTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp ATGTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: MYVSLRALRSWFFSFQDVILALV*SAKAKD
Trigger: GTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAAT...TACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp TTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAAAACAATTCTGGCCTaGGTTTTGTCAGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: FPWSISCLALFPIHLKPVKTILA*VLSAKA
Trigger: TGCTTTGGCTGACAAAACCAAGGCCAGAATTGTTTT...AACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTAGGGCCCCCAACTCATaGCCTGAAAACACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSRAPNS*PENTLH
Trigger: ATGGAGGGTGTTTTCAGGCAATGAGTTGGGGGCCCT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CAA 90 bp GTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCTGCTTTTGGCTGTGGTCTATTAGCTGTTaGGCTCTGTTTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: VGKCKYTQGWTILVCFWLWSISC*ALFPIH
Trigger: GTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA...CAGCCAAAAGCAGACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CAA 90 bp GTACGTGTCTTTGAGAGCACTGCGATCCTGGTTCTTCTCTTTCCAAGATGTAAAGACAAAGACAAATTCTaGGTTGCTAGGAAGCTAGCC +
Preference number: 5 (lower is better)
Translates to: VRVFESTAILVLLFPRCKDKDKF*VARKLA
Trigger: GGCTAGCTTCCTAGCAACCAAGAATTTGTCTTTGTC...TTTACATCTTGGAAAGAGAAGAACCAGGATCGCAGTGCTCTCAAAGACACGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp TCATTGCCTGAAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCATATTTTAGTCTGCTTTaGGCTGCAGATTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: SLPENTLHSPLSCFSATAYFSLL*AADCTS
Trigger: AGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATA...TGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTTCAGGCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp TTCCCCTGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTTTTCACTGTGGATCTTaGAATCCCAATCCAAACCTT +
Preference number: 5 (lower is better)
Translates to: FPWSISCLALFPIHLKPVFHCGS*NPNPNL
Trigger: AAGGTTTGGATTGGGATTCAAAGATCCACAGTGAAA...AACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCAGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505986.5
CDS-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAAAAGTTAAGGAATTCTaGTCCCAGCGCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTKVKEF*SQRSHW
Trigger: CCAGTGGCTGCGCTGGGACAAGAATTCCTTAACTTT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CAA 90 bp TATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTAAAAGTTAAGGAATTCTaGTCCCAGCGCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: YPNRPYNHYPALDCEMQLKVKEF*SQRSHW
Trigger: CCAGTGGCTGCGCTGGGACAAGAATTCCTTAACTTT...TAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505986.5
ENST00000512556.1
ENST00000515668.5
CDS-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAATGGAAGCACTCGGATaGTGGAGAAGTGGACTGCTA +
Preference number: 5 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTMEALG*WRSGLL
Trigger: TAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCAT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CAA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGTCGGGTATTTCACTGTaGGAAACTCAGGATCCGGAT +
Preference number: 5 (lower is better)
Translates to: VYKESLILAHGCPTGVILSGISL*ETQDPD
Trigger: ATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGA...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp TGGTCTATTAGCTGTTTGGCTCTGTTTCCCATCCACTTAAAGCCAGTTAATGTTCTACCACAAAGGGGGTaGGCGTTATATCAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: WSISCLALFPIHLKPVNVLPQRG*ALYQKR
Trigger: TCTTTTCTGATATAACGCCAACCCCCTTTGTGGTAG...AACATTAACTGGCTTTAAGTGGATGGGAAACAGAGCCAAACAGCTAATAGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CAA 90 bp AAAACACCCTCCATTCACCACTGTCTTGCTTTTCTGCCACAGCAAGTCTATCAGCATTCCATCTTCTACTaGGTAGAGCTAGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: KTPSIHHCLAFLPQQVYQHSIFY*VELENS
Trigger: AGAATTTTCTAGCTCTACCAAGTAGAAGATGGAATG...CTGATAGACTTGCTGTGGCAGAAAAGCAAGACAGTGGTGAATGGAGGGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CAA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTAGGGCACAAAGGGGGTaGGCGTTATATCAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSRAQRG*ALYQKR
Trigger: TCTTTTCTGATATAACGCCAACCCCCTTTGTGCCCT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGACAAGGTCAAAAGCCTaGAAAGCTGACTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: VYKESLILAHGCPTGVILTRSKA*KADCTK
Trigger: CTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGT...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp AGCTCCATTATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGAACAAGGTCAAAAGCCTaGAAAGCTGACTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: SSIIPIDLITIILLWIVRTRSKA*KADCTK
Trigger: CTTTGTGCAGTCAGCTTTCAAGGCTTTTGACCTTGT...TCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGATAATGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CAA 90 bp ATCCCAATAGACCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTATTCGGGTATTTCACTGTaGGAAACTCAGGATCCGGAT +
Preference number: 5 (lower is better)
Translates to: IPIDLITIILLWIVRCSYSGISL*ETQDPD
Trigger: ATCCGGATCCTGAGTTTCCAACAGTGAAATACCCGA...ATAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGGTCTATTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000512556.1
CDS-3UTR CAA 90 bp TCCAAGCTCAACTTTTTAGTAGGAATGTTAGTTTGTTGGGTTTGGCCATTTTCTATTCTGGCCTTGGTTTaGTCAGCCAAAGCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: SKLNFLVGMLVCWVWPFSILALV*SAKAKD
Trigger: GTCTTTTGCTTTGGCTGACAAAACCAAGGCCAGAAT...AGAAAATGGCCAAACCCAACAAACTAACATTCCTACTAAAAAGTTGAGCTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAGACAAAGACAAATTCTaGGTTGCTAGGAAGCTAGCC +
Preference number: 5 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTDKDKF*VARKLA
Trigger: GGCTAGCTTCCTAGCAACCAAGAATTTGTCTTTGTC...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CAA 90 bp CCCAGCTTAATTGTAGGTAAATGCAAGTATACCCAAGGCTGGACTATTTTAGTCTATTTTAGTCTGCTTTaGGCTGCAGATTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: PSLIVGKCKYTQGWTILVYFSLL*AADCTS
Trigger: AGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATA...GACTAAAATAGTCCAGCCTTGGGTATACTTGCATTTACCTACAATTAAGCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510084.2
ENST00000512556.1
CDS-3UTR CAA 90 bp GTATATAAAGAAAGTTTGATCCTAGCTCATGGGTGCCCAACTGGAGTTATTTTGAGTAGGAATGTTAGTTaGTTGGGTTTGGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: VYKESLILAHGCPTGVILSRNVS*LGLAIF
Trigger: GAAAATGGCCAAACCCAACAAACTAACATTCCTACT...CAAAATAACTCCAGTTGGGCACCCATGAGCTAGGATCAAACTTTCTTTATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS TCA 90 bp CCTTATAACCATTATCCTGCTTTGGATTGTGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCAAATGTGATACTGTGTAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: PYNHYPALDCEMQLS*FQHKVSNVILCSLD
Trigger: ATCCAGACTACACAGTATCACATTTGAAACTTTGTGCTGGAATCATGATAACTGCATCTCACAATCCAAAGCAGGATAATGGTTATAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1
CDS-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAAACCATTATCCTGCTTaGGATTGTGAGATGCAGTTA +
Preference number: 5 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTNHYPA*DCEMQL
Trigger: TAACTGCATCTCACAATCCAAAGCAGGATAATGGTT...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACAGTATATAAAGAAAGTTaGATCCTAGCTCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTVYKES*ILAHGC
Trigger: GCACCCATGAGCTAGGATCAAACTTTCTTTATATAC...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381967.9
CDS-3UTR CAA 90 bp TTATTGATGGAAGCACTCGGATTGTGGAGAAGTGGACTGCTATCAATTAAAGAACATTCCATCTTCTACTaGGTAGAGCTAGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: LLMEALGLWRSGLLSIKEHSIFY*VELENS
Trigger: AGAATTTTCTAGCTCTACCAAGTAGAAGATGGAATG...TTCTTTAATTGATAGCAGTCCACTTCTCCACAATCCGAGTGCTTCCATCAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505986.5
ENST00000515668.5
CDS-3UTR CAA 90 bp TATGACAGCCCAGAATTTACTAACTCCATAGGTTTTCTGGATATTTCAAGCACATATTTTAGTCTGCTTTaGGCTGCAGATTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: YDSPEFTNSIGFLDISSTYFSLL*AADCTS
Trigger: AGAAGTACAATCTGCAGCCAAAAGCAGACTAAAATA...TGTGCTTGAAATATCCAGAAAACCTATGGAGTTAGTAAATTCTGGGCTGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000512556.1
CDS GCA 72 bp TCTCCTGGTCCAGCCGGGCGTCCTCGCCTAGACCGCTaGCTTCTGGAGCCGCCATCGCTGAGCTTGTGCTAC +
Preference number: 6 (lower is better)
Translates to: SPGPAGRPRLDR*LLEPPSLSLCY
Trigger: GTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGGACGCCCGGCTGGACCAGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381967.9
ENST00000515668.5
ENST00000625312.2
CDS CAA 90 bp CGTCCTCGCCTAGACCGCTGCCTTCTGGAGCCGCCATCGCTGAGCTaGTGCTACCGCTGCAGAGGGAAGCAGGCGGTGAGATCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RPRLDRCLLEPPSLS*CYRCRGKQAVRSAF
Trigger: GAAGGCAGATCTCACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTCTAGGCGAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625312.2
CDS GCA 72 bp GACCGCTGCCTTCTGGAGCCGCCATCGCTGAGCTTGTaGTACCGCTGCAGAGGGAAGCAGGCGGTGAGATCT +
Preference number: 6 (lower is better)
Translates to: DRCLLEPPSLSL*YRCRGKQAVRS
Trigger: AGATCTCACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000625312.2
CDS GCA 72 bp CTTCTGGAGCCGCCATCGCTGAGCTTGTGCTACCGCTaGAGAGGGAAGCAGGCGGTGAGATCTGCCTTCCGG +
Preference number: 6 (lower is better)
Translates to: LLEPPSLSLCYR*RGKQAVRSAFR
Trigger: CCGGAAGGCAGATCTCACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625312.2
CDS CAA 72 bp CTAGACCGCTGCCTTCTGGAGCCGCCATCGCTGAGCTaGTGCTACCGCTGCAGAGGGAAGCAGGCGGTGAGA +
Preference number: 6 (lower is better)
Translates to: LDRCLLEPPSLS*CYRCRGKQAVR
Trigger: TCTCACCGCCTGCTTCCCTCTGCAGCGGTAGCACAAGCTCAGCGATGGCGGCTCCAGAAGGCAGCGGTCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381967.9
ENST00000625312.2
CDS GCA 72 bp GAGGTACACAGGAATCCCCTGACTGATAAATGTGGTTaGAGCAAGTCGGGCAAACCTTCTGCTGCTACCCCC +
Preference number: 6 (lower is better)
Translates to: EVHRNPLTDKCG*SKSGKPSAATP
Trigger: GGGGGTAGCAGCAGAAGGTTTGCCCGACTTGCTGCAACCACATTTATCAGTCAGGGGATTCCTGTGTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381967.9
ENST00000505986.5
ENST00000515668.5
ENST00000625312.2
CDS TCA 72 bp GGCGTTATATCAGAAAAGAGGTACACAGGAATCCCCTaGCTGATAAATGTGGTTGCAGCAAGTCGGGCAAAC +
Preference number: 6 (lower is better)
Translates to: GVISEKRYTGIP*LINVVAASRAN
Trigger: GTTTGCCCGACTTGCTGCAACCACATTTATCAGTCAGGGGATTCCTGTGTACCTCTTTTCTGATATAACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381967.9
ENST00000505986.5
ENST00000515668.5
ENST00000625312.2
CDS TCA 72 bp CATTATCCTGCTTTGGATTGTGAGATGCAGTTATCATaGTTCCAGCACAAAGTTTCAAATGTGATACTGTGT +
Preference number: 6 (lower is better)
Translates to: HYPALDCEMQLS*FQHKVSNVILC
Trigger: ACACAGTATCACATTTGAAACTTTGTGCTGGAATCATGATAACTGCATCTCACAATCCAAAGCAGGATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512556.1