Pregenerated sensors for PGLYRP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000159527Ensembl transcript IDs: ENST00000290722.1, ENST00000683862.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTATGGTGTAGACGGAATGGGACTGCAACCCCCGCAGCATCTGGCTaGAAACGCTCTGCTGCTGGCACTGCATCCCTGGGAGCTGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LWCRRNGTATPAASG*KRSAAGTASLGAGL Trigger: CAGACCAGCTCCCAGGGATGCAGTGCCAGCAGCAGAGCGTTTGCAGCCAGATGCTGCGGGGGTTGCAGTCCCATTCCGTCTACACCATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 90 bp | CATCATCCCCAACCAGGAAGTTGTACGCCACGTCGCACCAGCCTATaGTGTAGACGGAATGGGACTGCAACCCCCGCAGCATCTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HHPQPGSCTPRRTSL*CRRNGTATPAASGC Trigger: GCAGCCAGATGCTGCGGGGGTTGCAGTCCCATTCCGTCTACACCATAGGCTGGTGCGACGTGGCGTACAACTTCCTGGTTGGGGATGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 90 bp | CACTGGATGTTGAGGGTCCAGGCAGGTCTCTTCTTTCAGAAGAAGTaGCTGAATATACCTGGGCGACAGGTGACCCTTCTGGATGGCATA | + |
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Preference number: 5 (lower is better) Translates to: HWMLRVQAGLFFQKK*LNIPGRQVTLLDGI Trigger: TATGCCATCCAGAAGGGTCACCTGTCGCCCAGGTATATTCAGCCACTTCTTCTGAAAGAAGAGACCTGCCTGGACCCTCAACATCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 90 bp | AGTGCAGCTTGTGCCAGCGGTGTGGATGATGATGACATATTTGGCTaGGAGGTTCATTTTAGGGCAGTGTGTCTCTCTGGCTTCCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: SAACASGVDDDDIFG*EVHFRAVCLSGFPS Trigger: GCTTGGGAAGCCAGAGAGACACACTGCCCTAAAATGAACCTCCCAGCCAAATATGTCATCATCATCCACACCGCTGGCACAAGCTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 90 bp | ACAGTCTGGCAGTCTGTGGATACAGTGCAGCTTGTGCCAGCGGTGTaGATGATGATGACATATTTGGCTGGGAGGTTCATTTTAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: TVWQSVDTVQLVPAV*MMMTYLAGRFILGQ Trigger: CTGCCCTAAAATGAACCTCCCAGCCAAATATGTCATCATCATCCACACCGCTGGCACAAGCTGCACTGTATCCACAGACTGCCAGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS GCA 72 bp | GACTGCAACCCCCGCAGCATCTGGCTGCAAACGCTCTaGTGCTGGCACTGCATCCCTGGGAGCTGGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DCNPRSIWLQTL*CWHCIPGSWSV Trigger: CACAGACCAGCTCCCAGGGATGCAGTGCCAGCAGCAGAGCGTTTGCAGCCAGATGCTGCGGGGGTTGCAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS GCA 72 bp | AGACGGAATGGGACTGCAACCCCCGCAGCATCTGGCTaGAAACGCTCTGCTGCTGGCACTGCATCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RRNGTATPAASG*KRSAAGTASLG Trigger: TCCCAGGGATGCAGTGCCAGCAGCAGAGCGTTTGCAGCCAGATGCTGCGGGGGTTGCAGTCCCATTCCGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 72 bp | CTGGCTGCAAACGCTCTGCTGCTGGCACTGCATCCCTaGGAGCTGGTCTGTGATGATGTAGGCCACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LAANALLLALHP*ELVCDDVGHRQ Trigger: CTGCCTGTGGCCTACATCATCACAGACCAGCTCCCAGGGATGCAGTGCCAGCAGCAGAGCGTTTGCAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 72 bp | CAACCAGGAAGTTGTACGCCACGTCGCACCAGCCTATaGTGTAGACGGAATGGGACTGCAACCCCCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QPGSCTPRRTSL*CRRNGTATPAA Trigger: TGCTGCGGGGGTTGCAGTCCCATTCCGTCTACACCATAGGCTGGTGCGACGTGGCGTACAACTTCCTGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS TCA 72 bp | AGAGAGGGGAAGTCTAAACTCAGACCAAGAGGGCTGTaGATGCCCAGCTGTGAGGTTTGGGGGCTCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: REGKSKLRPRGL*MPSCEVWGLLE Trigger: CTCCAGGAGCCCCCAAACCTCACAGCTGGGCATTCACAGCCCTCTTGGTCTGAGTTTAGACTTCCCCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000683862.1 |
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| CDS CCA 72 bp | GCTGAATATACCTGGGCGACAGGTGACCCTTCTGGATaGCATAGGAGATCAGACCCTCTGCAGCTGATAAGG | + |
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Preference number: 6 (lower is better) Translates to: AEYTWATGDPSG*HRRSDPLQLIR Trigger: CCTTATCAGCTGCAGAGGGTCTGATCTCCTATGCCATCCAGAAGGGTCACCTGTCGCCCAGGTATATTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CAA 72 bp | GGGCAGTGTGTCTCTCTGGCTTCCCAAGCAGATCGTTaGATGATGTTGGGGCAAACCTTCCTGGGCATCACT | + |
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Preference number: 6 (lower is better) Translates to: GQCVSLASQADR*MMLGQTFLGIT Trigger: AGTGATGCCCAGGAAGGTTTGCCCCAACATCATCAAACGATCTGCTTGGGAAGCCAGAGAGACACACTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CAA 90 bp | GATACAGTGCAGCTTGTGCCAGCGGTGTGGATGATGATGACATATTaGGCTGGGAGGTTCATTTTAGGGCAGTGTGTCTCTCTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DTVQLVPAVWMMMTY*AGRFILGQCVSLAS Trigger: GGAAGCCAGAGAGACACACTGCCCTAAAATGAACCTCCCAGCCAAATATGTCATCATCATCCACACCGCTGGCACAAGCTGCACTGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 72 bp | TGTGCCAGCGGTGTGGATGATGATGACATATTTGGCTaGGAGGTTCATTTTAGGGCAGTGTGTCTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CASGVDDDDIFG*EVHFRAVCLSG Trigger: GCCAGAGAGACACACTGCCCTAAAATGAACCTCCCAGCCAAATATGTCATCATCATCCACACCGCTGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CCA 72 bp | CAGTCTGTGGATACAGTGCAGCTTGTGCCAGCGGTGTaGATGATGATGACATATTTGGCTGGGAGGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: QSVDTVQLVPAV*MMMTYLAGRFI Trigger: AATGAACCTCCCAGCCAAATATGTCATCATCATCCACACCGCTGGCACAAGCTGCACTGTATCCACAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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| CDS CAA 72 bp | CAGCTTGTGCCAGCGGTGTGGATGATGATGACATATTaGGCTGGGAGGTTCATTTTAGGGCAGTGTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QLVPAVWMMMTY*AGRFILGQCVS Trigger: AGAGACACACTGCCCTAAAATGAACCTCCCAGCCAAATATGTCATCATCATCCACACCGCTGGCACAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000290722.1 ENST00000683862.1 |
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