Pregenerated sensors for PGLYRP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000008438Ensembl transcript IDs: ENST00000008938.5
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GCACATTCCGGGCCTGCTGCTGGCACGAGGCGGGGGTGTTGCAGCTaGTGCCCGCCGTGTGCGATACCACCACATAGCGTAAGGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: AHSGPAAGTRRGCCS*CPPCAIPPHSVRAG Trigger: GCCTGCCCTTACGCTATGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGGCCCGGAATGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS CCA 90 bp | GGGCGCACTCTGATGCCAGGGCCTTCCACTCGTTCCGGGGCACTATaGGGCTGCAGCAGGCCGGGTCTTCTGTCTCCTGAGCCGCTCCGA | + |
Preference number: 5 (lower is better) Translates to: GRTLMPGPSTRSGAL*GCSRPGLLSPEPLR Trigger: TCGGAGCGGCTCAGGAGACAGAAGACCCGGCCTGCTGCAGCCCCATAGTGCCCCGGAACGAGTGGAAGGCCCTGGCATCAGAGTGCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS GCA 90 bp | CATTCCGGGCCTGCTGCTGGCACGAGGCGGGGGTGTTGCAGCTGCTaGCCGCCGTGTGCGATACCACCACATAGCGTAAGGGCAGGCTCA | + |
Preference number: 5 (lower is better) Translates to: HSGPAAGTRRGCCSC*PPCAIPPHSVRAGS Trigger: TGAGCCTGCCCTTACGCTATGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGGCCCGGAATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS GCA 90 bp | AGTGCTGCACATTCCGGGCCTGCTGCTGGCACGAGGCGGGGGTGTTaGAGCTGCTGCCCGCCGTGTGCGATACCACCACATAGCGTAAGG | + |
Preference number: 5 (lower is better) Translates to: SAAHSGPAAGTRRGC*SCCPPCAIPPHSVR Trigger: CCTTACGCTATGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGGCCCGGAATGTGCAGCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS GCA 90 bp | ACTCTGATGCCAGGGCCTTCCACTCGTTCCGGGGCACTATGGGGCTaGAGCAGGCCGGGTCTTCTGTCTCCTGAGCCGCTCCGAGTCGAA | + |
Preference number: 5 (lower is better) Translates to: TLMPGPSTRSGALWG*SRPGLLSPEPLRVE Trigger: TTCGACTCGGAGCGGCTCAGGAGACAGAAGACCCGGCCTGCTGCAGCCCCATAGTGCCCCGGAACGAGTGGAAGGCCCTGGCATCAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS CCA 90 bp | AGGAATGGGGTGCGGATCAGCAGGGCCTCAGGGGGAGCGGTAGTGTaGCCAATTCTGGATGAGGTGGTAGAGCTGGTTGCCTGGAGAGAG | + |
Preference number: 5 (lower is better) Translates to: RNGVRISRASGGAVV*PILDEVVELVAWRE Trigger: CTCTCTCCAGGCAACCAGCTCTACCACCTCATCCAGAATTGGCCACACTACCGCTCCCCCTGAGGCCCTGCTGATCCGCACCCCATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS TCA 90 bp | GATCAGCAGGGCCTCAGGGGGAGCGGTAGTGTGGCCAATTCTGGATaGGGTGGTAGAGCTGGTTGCCTGGAGAGAGTGTACGCTGCACAT | + |
Preference number: 5 (lower is better) Translates to: DQQGLRGSGSVANSG*GGRAGCLERVYAAH Trigger: ATGTGCAGCGTACACTCTCTCCAGGCAACCAGCTCTACCACCTCATCCAGAATTGGCCACACTACCGCTCCCCCTGAGGCCCTGCTGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS TCA 90 bp | TGCCAATGGACATGGGGTTCCATAAGTGACCTGAGTGGGCACCCGTaGAGTTCCAGCCACGGCCCTCGTATACGAGCCCGTCTTCTCCAA | + |
Preference number: 5 (lower is better) Translates to: CQWTWGSISDLSGHP*SSSHGPRIRARLLQ Trigger: TTGGAGAAGACGGGCTCGTATACGAGGGCCGTGGCTGGAACTTCACGGGTGCCCACTCAGGTCACTTATGGAACCCCATGTCCATTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS GCA 72 bp | GGGCCTGCTGCTGGCACGAGGCGGGGGTGTTGCAGCTaGTGCCCGCCGTGTGCGATACCACCACATAGCGTA | + |
Preference number: 6 (lower is better) Translates to: GPAAGTRRGCCS*CPPCAIPPHSV Trigger: TACGCTATGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS GCA 72 bp | CATTCCGGGCCTGCTGCTGGCACGAGGCGGGGGTGTTaGAGCTGCTGCCCGCCGTGTGCGATACCACCACAT | + |
Preference number: 6 (lower is better) Translates to: HSGPAAGTRRGC*SCCPPCAIPPH Trigger: ATGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGGCCCGGAATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS CAA 72 bp | ACATTCCGGGCCTGCTGCTGGCACGAGGCGGGGGTGTaGCAGCTGCTGCCCGCCGTGTGCGATACCACCACA | + |
Preference number: 6 (lower is better) Translates to: TFRACCWHEAGV*QLLPAVCDTTT Trigger: TGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGGCCCGGAATGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS GCA 72 bp | CCTGCTGCTGGCACGAGGCGGGGGTGTTGCAGCTGCTaGCCGCCGTGTGCGATACCACCACATAGCGTAAGG | + |
Preference number: 6 (lower is better) Translates to: PAAGTRRGCCSC*PPCAIPPHSVR Trigger: CCTTACGCTATGTGGTGGTATCGCACACGGCGGGCAGCAGCTGCAACACCCCCGCCTCGTGCCAGCAGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS CCA 72 bp | CTGATGCCAGGGCCTTCCACTCGTTCCGGGGCACTATaGGGCTGCAGCAGGCCGGGTCTTCTGTCTCCTGAG | + |
Preference number: 6 (lower is better) Translates to: LMPGPSTRSGAL*GCSRPGLLSPE Trigger: CTCAGGAGACAGAAGACCCGGCCTGCTGCAGCCCCATAGTGCCCCGGAACGAGTGGAAGGCCCTGGCATCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS CCA 72 bp | GTGCGGATCAGCAGGGCCTCAGGGGGAGCGGTAGTGTaGCCAATTCTGGATGAGGTGGTAGAGCTGGTTGCC | + |
Preference number: 6 (lower is better) Translates to: VRISRASGGAVV*PILDEVVELVA Trigger: GGCAACCAGCTCTACCACCTCATCCAGAATTGGCCACACTACCGCTCCCCCTGAGGCCCTGCTGATCCGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS TCA 72 bp | ACATGGGGTTCCATAAGTGACCTGAGTGGGCACCCGTaGAGTTCCAGCCACGGCCCTCGTATACGAGCCCGT | + |
Preference number: 6 (lower is better) Translates to: TWGSISDLSGHP*SSSHGPRIRAR Trigger: ACGGGCTCGTATACGAGGGCCGTGGCTGGAACTTCACGGGTGCCCACTCAGGTCACTTATGGAACCCCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS TCA 72 bp | GGCCTCAGGGGGAGCGGTAGTGTGGCCAATTCTGGATaGGGTGGTAGAGCTGGTTGCCTGGAGAGAGTGTAC | + |
Preference number: 6 (lower is better) Translates to: GLRGSGSVANSG*GGRAGCLERVY Trigger: GTACACTCTCTCCAGGCAACCAGCTCTACCACCTCATCCAGAATTGGCCACACTACCGCTCCCCCTGAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS TCA 72 bp | CTGGAGAGAGTGTACGCTGCACATCCCGGTGTCCTTTaGGCACATAGTTGGACCTCAGGGCTCCCTGAGCCA | + |
Preference number: 6 (lower is better) Translates to: LERVYAAHPGVL*AHSWTSGLPEP Trigger: TGGCTCAGGGAGCCCTGAGGTCCAACTATGTGCTCAAAGGACACCGGGATGTGCAGCGTACACTCTCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008938.5 |
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CDS TCA 72 bp | ATGAAGCTGATGCCAATGGACATGGGGTTCCATAAGTaGCCTGAGTGGGCACCCGTGAAGTTCCAGCCACGG | + |
Preference number: 6 (lower is better) Translates to: MKLMPMDMGFHK*PEWAPVKFQPR Trigger: CCGTGGCTGGAACTTCACGGGTGCCCACTCAGGTCACTTATGGAACCCCATGTCCATTGGCATCAGCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008938.5 |