Pregenerated sensors for PGLS-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000269439Ensembl transcript IDs: ENST00000596643.5, ENST00000598141.1, ENST00000615939.1, ENST00000655024.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGGGTGCGGCGCTAGCGCAGCTGGTGGCCCAGCGCGCAGCATGCTaGCTGGCAGGGGCCCGCGCCCGTTTCGCGCTCGGCCTGTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LGAALAQLVAQRAAC*LAGARARFALGLSG Trigger: GCCCGACAGGCCGAGCGCGAAACGGGCGCGGGCCCCTGCCAGGCAGCATGCTGCGCGCTGGGCCACCAGCTGCGCTAGCGCCGCACCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 90 bp | GACAATCACCCAAAGTACTCGAAACCAAGCGGCAGGGCCGGCCCTTaGGCAGGCGTACTAGCGACGGCCGTAGGGAGCGCTTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: DNHPKYSKPSGRAGP*AGVLATAVGSASSS Trigger: GGAGGAGGAAGCGCTCCCTACGGCCGTCGCTAGTACGCCTGCGCAAGGGCCGGCCCTGCCGCTTGGTTTCGAGTACTTTGGGTGATTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS TCA 90 bp | CTCTTCTTGAGCTCCCCTCTCCGGCCCTCCCTGATACAGCAAGGTTaGGCATTCGGGCACTGGCTTCCCGAACTCACTTCGACTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFLSSPLRPSLIQQG*AFGHWLPELTSTQA Trigger: TGCCTGAGTCGAAGTGAGTTCGGGAAGCCAGTGCCCGAATGCTCAACCTTGCTGTATCAGGGAGGGCCGGAGAGGGGAGCTCAAGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 90 bp | CGACTGCCCGACCTTCGCGGTGCTTCACTTGCCTCACTGCGCATGTaGCAAAGACAATCACCCAAAGTACTCGAAACCAAGCGGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RLPDLRGASLASLRM*QRQSPKVLETKRQG Trigger: GCCCTGCCGCTTGGTTTCGAGTACTTTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 90 bp | GGCCGGACCGACTGCCCGACCTTCGCGGTGCTTCACTTGCCTCACTaGGCATGTGCCAAAGACAATCACCCAAAGTACTCGAAACCAAGC | + |
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Preference number: 5 (lower is better) Translates to: GRTDCPTFAVLHLPH*ACAKDNHPKYSKPS Trigger: GCTTGGTTTCGAGTACTTTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 90 bp | ATGGGTAGGGCCGGACCGACTGCCCGACCTTCGCGGTGCTTCACTTaGCTCACTGCGCATGTGCCAAAGACAATCACCCAAAGTACTCGA | + |
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Preference number: 5 (lower is better) Translates to: MGRAGPTARPSRCFT*LTAHVPKTITQSTR Trigger: TCGAGTACTTTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGCCCTACCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CCA 90 bp | GTTGTCCAGGGACTGTGGCAAGTTGGCAGATGCAGATTGGACAGATaGGGCCCAGAGAGATTCAGGCCAGGTCACACAGCTGAGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: VVQGLWQVGRCRLDR*GPERFRPGHTAEQG Trigger: CCCCTGCTCAGCTGTGTGACCTGGCCTGAATCTCTCTGGGCCCCATCTGTCCAATCTGCATCTGCCAACTTGCCACAGTCCCTGGACAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CCA 90 bp | CTTCCCGAACTCACTTCGACTCAGGCACAGCAGGCAAAGATTCAATaGGTAGGGCCGGACCGACTGCCCGACCTTCGCGGTGCTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: LPELTSTQAQQAKIQ*VGPDRLPDLRGASL Trigger: AAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGCCCTACCCATTGAATCTTTGCCTGCTGTGCCTGAGTCGAAGTGAGTTCGGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CCA 90 bp | CAGGTATGGAGCCCGGAGGGAATAGCAAGGCTGACTGGGAAGGATTaGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTTGGCAGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: QVWSPEGIARLTGKD*VRGCPGTVASWQMQ Trigger: CTGCATCTGCCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATTCCCTCCGGGCTCCATACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CCA 90 bp | ACCCTCTGCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATaGGCTGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: TLCRKHHRRGAVSHL*ADSRPPQEILGQPL Trigger: AAGCGGCTGGCCGAGAATTTCTTGCGGAGGACGACTGTCAGCCCATAGATGAGACACTGCCCCACGCCGATGATGTTTCCTGCAGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 90 bp | AAAGATTCAATGGGTAGGGCCGGACCGACTGCCCGACCTTCGCGGTaGTTCACTTGCCTCACTGCGCATGTGCCAAAGACAATCACCCAA | + |
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Preference number: 5 (lower is better) Translates to: KDSMGRAGPTARPSR*FTCLTAHVPKTITQ Trigger: TTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGCCCTACCCATTGAATCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CCA 90 bp | ACTGGGAAGGATTGGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTTaGCAGATGCAGATTGGACAGATGGGGCCCAGAGAGATTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGKDWVRGCPGTVAS*QMQIGQMGPREIQA Trigger: GGCCTGAATCTCTCTGGGCCCCATCTGTCCAATCTGCATCTGCCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CCA 90 bp | CCTTCCAGCCCTCTGTCCAGGCAAGAACTCGATTGGAGGCCTTTCTaGGCACTCAGAGGGACACACCACCACACTAGGAGGGTTAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: PSSPLSRQELDWRPF*ALRGTHHHTRRVSL Trigger: TAAGCTAACCCTCCTAGTGTGGTGGTGTGTCCCTCTGAGTGCCCAGAAAGGCCTCCAATCGAGTTCTTGCCTGGACAGAGGGCTGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615939.1 |
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| CDS CCA 90 bp | GTACAGGAAACAGGTATGGAGCCCGGAGGGAATAGCAAGGCTGACTaGGAAGGATTGGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: VQETGMEPGGNSKAD*EGLGERLSRDCGKL Trigger: CAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATTCCCTCCGGGCTCCATACCTGTTTCCTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS TCA 90 bp | CTCCCACTGGGAAGCCCGTCATGTCTGATGGTCTCTCTTTGTCCTTaGCACACCATCTTGCATTGGTTACTACTTACTGTCTCCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LPLGSPSCLMVSLCP*HTILHWLLLTVSWA Trigger: GGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGACGGGCTTCCCAGTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS TCA 90 bp | CTTATGGGTGGTGTGGTGTCCTCCCACTGGGAAGCCCGTCATGTCTaGTGGTCTCTCTTTGTCCTTGACACACCATCTTGCATTGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: LMGGVVSSHWEARHV*WSLFVLDTPSCIGY Trigger: GTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGACGGGCTTCCCAGTGGGAGGACACCACACCACCCATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 90 bp | ATTGAGATAGTGTCCAGAACAGGTTTGACTCTTAACATTTGGGGCTaGATCATTCCCTGGGGTGGGACGTGTCCTGTGCATTGTAGCATA | + |
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Preference number: 5 (lower is better) Translates to: IEIVSRTGLTLNIWG*IIPWGGTCPVHCSI Trigger: TATGCTACAATGCACAGGACACGTCCCACCCCAGGGAATGATCCAGCCCCAAATGTTAAGAGTCAAACCTGTTCTGGACACTATCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 90 bp | ACAGAAATTGAGATAGTGTCCAGAACAGGTTTGACTCTTAACATTTaGGGCTGGATCATTCCCTGGGGTGGGACGTGTCCTGTGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: TEIEIVSRTGLTLNI*GWIIPWGGTCPVHC Trigger: ACAATGCACAGGACACGTCCCACCCCAGGGAATGATCCAGCCCCAAATGTTAAGAGTCAAACCTGTTCTGGACACTATCTCAATTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 90 bp | GACACACCATCTTGCATTGGTTACTACTTACTGTCTCCTGGGCCTTaGAAGCTCATTCTGTCAGTTTCCAAAATACGCCCTCCTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: DTPSCIGYYLLSPGP*KLILSVSKIRPPSE Trigger: TTCTGAAGGAGGGCGTATTTTGGAAACTGACAGAATGAGCTTCCAAGGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGATGGTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 90 bp | GCATTGTTTTTAAGTGACAGTGATATCTCAGTGTCATCAGGAATCTaGGCAGTGGCTCAATTCTGTCTCACAATGTCAAAAATGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ALFLSDSDISVSSGI*AVAQFCLTMSKMCF Trigger: AAAACACATTTTTGACATTGTGAGACAGAATTGAGCCACTGCCCAGATTCCTGATGACACTGAGATATCACTGTCACTTAAAAACAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS TCA 90 bp | TTTCTTAATTTGCTACTGATTTTAAAATCCACTACCTGTGTGAGTTaGACTGCGCTTACACACATCACTGAAATATCCCACTCTCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: FLNLLLILKSTTCVS*TALTHITEISHSQK Trigger: CTTCTGAGAGTGGGATATTTCAGTGATGTGTGTAAGCGCAGTTCAACTCACACAGGTAGTGGATTTTAAAATCAGTAGCAAATTAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615939.1 |
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| CDS CAA 72 bp | CCCAAAGTACTCGAAACCAAGCGGCAGGGCCGGCCCTaGCGCAGGCGTACTAGCGACGGCCGTAGGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PKVLETKRQGRP*RRRTSDGRRER Trigger: GCGCTCCCTACGGCCGTCGCTAGTACGCCTGCGCAAGGGCCGGCCCTGCCGCTTGGTTTCGAGTACTTTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 72 bp | CCAAAGTACTCGAAACCAAGCGGCAGGGCCGGCCCTTaGGCAGGCGTACTAGCGACGGCCGTAGGGAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PKYSKPSGRAGP*AGVLATAVGSA Trigger: AGCGCTCCCTACGGCCGTCGCTAGTACGCCTGCGCAAGGGCCGGCCCTGCCGCTTGGTTTCGAGTACTTTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CAA 90 bp | AGACAATCACCCAAAGTACTCGAAACCAAGCGGCAGGGCCGGCCCTaGCGCAGGCGTACTAGCGACGGCCGTAGGGAGCGCTTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RQSPKVLETKRQGRP*RRRTSDGRRERFLL Trigger: GAGGAGGAAGCGCTCCCTACGGCCGTCGCTAGTACGCCTGCGCAAGGGCCGGCCCTGCCGCTTGGTTTCGAGTACTTTGGGTGATTGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 72 bp | ATGGGTAGGGCCGGACCGACTGCCCGACCTTCGCGGTaGTTCACTTGCCTCACTGCGCATGTGCCAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: MGRAGPTARPSR*FTCLTAHVPKT Trigger: TGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGCCCTACCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CAA 72 bp | GGCCGGACCGACTGCCCGACCTTCGCGGTGCTTCACTaGCCTCACTGCGCATGTGCCAAAGACAATCACCCA | + |
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Preference number: 6 (lower is better) Translates to: GRTDCPTFAVLH*PHCACAKDNHP Trigger: TGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS TCA 72 bp | AGCTCCCCTCTCCGGCCCTCCCTGATACAGCAAGGTTaGGCATTCGGGCACTGGCTTCCCGAACTCACTTCG | + |
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Preference number: 6 (lower is better) Translates to: SSPLRPSLIQQG*AFGHWLPELTS Trigger: CGAAGTGAGTTCGGGAAGCCAGTGCCCGAATGCTCAACCTTGCTGTATCAGGGAGGGCCGGAGAGGGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596643.5 ENST00000655024.1 |
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| CDS GCA 72 bp | GCCGGACCGACTGCCCGACCTTCGCGGTGCTTCACTTaGCTCACTGCGCATGTGCCAAAGACAATCACCCAA | + |
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Preference number: 6 (lower is better) Translates to: AGPTARPSRCFT*LTAHVPKTITQ Trigger: TTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTCGGTCCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CCA 72 bp | CTCACTTCGACTCAGGCACAGCAGGCAAAGATTCAATaGGTAGGGCCGGACCGACTGCCCGACCTTCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: LTSTQAQQAKIQ*VGPDRLPDLRG Trigger: ACCGCGAAGGTCGGGCAGTCGGTCCGGCCCTACCCATTGAATCTTTGCCTGCTGTGCCTGAGTCGAAGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CAA 72 bp | GAGCTCCCCTCTCCGGCCCTCCCTGATACAGCAAGGTaGAGCATTCGGGCACTGGCTTCCCGAACTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: ELPSPALPDTAR*SIRALASRTHF Trigger: GAAGTGAGTTCGGGAAGCCAGTGCCCGAATGCTCAACCTTGCTGTATCAGGGAGGGCCGGAGAGGGGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596643.5 ENST00000655024.1 |
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| CDS CAA 90 bp | CCTCTTCTTGAGCTCCCCTCTCCGGCCCTCCCTGATACAGCAAGGTaGAGCATTCGGGCACTGGCTTCCCGAACTCACTTCGACTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PLLELPSPALPDTAR*SIRALASRTHFDSG Trigger: GCCTGAGTCGAAGTGAGTTCGGGAAGCCAGTGCCCGAATGCTCAACCTTGCTGTATCAGGGAGGGCCGGAGAGGGGAGCTCAAGAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CCA 72 bp | TCCCCTTCCAGCCCTCTGTCCAGGCAAGAACTCGATTaGAGGCCTTTCTGGGCACTCAGAGGGACACACCAC | + |
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Preference number: 6 (lower is better) Translates to: SPSSPLSRQELD*RPFWALRGTHH Trigger: GTGGTGTGTCCCTCTGAGTGCCCAGAAAGGCCTCCAATCGAGTTCTTGCCTGGACAGAGGGCTGGAAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615939.1 |
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| CDS TCA 72 bp | ACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGCTaGCAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSSAWGSVSSMG*QSSSARNSRPA Trigger: GGCTGGCCGAGAATTTCTTGCGGAGGACGACTGTCAGCCCATAGATGAGACACTGCCCCACGCCGATGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CCA 72 bp | AGCCCGGAGGGAATAGCAAGGCTGACTGGGAAGGATTaGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPEGIARLTGKD*VRGCPGTVASW Trigger: CCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATTCCCTCCGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CCA 72 bp | CCTCTGTCCAGGCAAGAACTCGATTGGAGGCCTTTCTaGGCACTCAGAGGGACACACCACCACACTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PLSRQELDWRPF*ALRGTHHHTRR Trigger: CCTCCTAGTGTGGTGGTGTGTCCCTCTGAGTGCCCAGAAAGGCCTCCAATCGAGTTCTTGCCTGGACAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615939.1 |
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| CDS CAA 72 bp | GAGCCCGGAGGGAATAGCAAGGCTGACTGGGAAGGATaGGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: EPGGNSKADWEG*GERLSRDCGKL Trigger: CAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATTCCCTCCGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CAA 72 bp | TTCCCCTTCCAGCCCTCTGTCCAGGCAAGAACTCGATaGGAGGCCTTTCTGGGCACTCAGAGGGACACACCA | + |
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Preference number: 6 (lower is better) Translates to: FPFQPSVQARTR*EAFLGTQRDTP Trigger: TGGTGTGTCCCTCTGAGTGCCCAGAAAGGCCTCCAATCGAGTTCTTGCCTGGACAGAGGGCTGGAAGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615939.1 |
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| CDS CAA 90 bp | GACTGGGAAGGATTGGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTaGGCAGATGCAGATTGGACAGATGGGGCCCAGAGAGATTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: DWEGLGERLSRDCGK*ADADWTDGAQRDSG Trigger: GCCTGAATCTCTCTGGGCCCCATCTGTCCAATCTGCATCTGCCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CAA 90 bp | ACAGGTATGGAGCCCGGAGGGAATAGCAAGGCTGACTGGGAAGGATaGGGTGAGAGGTTGTCCAGGGACTGTGGCAAGTTGGCAGATGCA | + |
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Preference number: 6 (lower is better) Translates to: TGMEPGGNSKADWEG*GERLSRDCGKLADA Trigger: TGCATCTGCCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATTCCCTCCGGGCTCCATACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS GCA 72 bp | GACTGCCCGACCTTCGCGGTGCTTCACTTGCCTCACTaGGCATGTGCCAAAGACAATCACCCAAAGTACTCG | + |
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Preference number: 6 (lower is better) Translates to: DCPTFAVLHLPH*ACAKDNHPKYS Trigger: CGAGTACTTTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTCGGGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CAA 90 bp | CCCGGAGGGAATAGCAAGGCTGACTGGGAAGGATTGGGTGAGAGGTaGTCCAGGGACTGTGGCAAGTTGGCAGATGCAGATTGGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: PGGNSKADWEGLGER*SRDCGKLADADWTD Trigger: ATCTGTCCAATCTGCATCTGCCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATTCCCTCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS TCA 72 bp | GGTGTGGTGTCCTCCCACTGGGAAGCCCGTCATGTCTaGTGGTCTCTCTTTGTCCTTGACACACCATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: GVVSSHWEARHV*WSLFVLDTPSC Trigger: GCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGACGGGCTTCCCAGTGGGAGGACACCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 72 bp | ACAGGAAATACAGGCGGGAGGTACAGGAAACAGGTATaGAGCCCGGAGGGAATAGCAAGGCTGACTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TGNTGGRYRKQV*SPEGIARLTGK Trigger: CTTCCCAGTCAGCCTTGCTATTCCCTCCGGGCTCCATACCTGTTTCCTGTACCTCCCGCCTGTATTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CCA 72 bp | AGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATaGGCTGACAGTCGTCCTCCGCAAGAAATTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RKHHRRGAVSHL*ADSRPPQEILG Trigger: GCCGAGAATTTCTTGCGGAGGACGACTGTCAGCCCATAGATGAGACACTGCCCCACGCCGATGATGTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS GCA 72 bp | GACCTTCGCGGTGCTTCACTTGCCTCACTGCGCATGTaGCAAAGACAATCACCCAAAGTACTCGAAACCAAG | + |
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Preference number: 6 (lower is better) Translates to: DLRGASLASLRM*QRQSPKVLETK Trigger: CTTGGTTTCGAGTACTTTGGGTGATTGTCTTTGGCACATGCGCAGTGAGGCAAGTGAAGCACCGCGAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596643.5 |
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| CDS CAA 72 bp | AATAGCAAGGCTGACTGGGAAGGATTGGGTGAGAGGTaGTCCAGGGACTGTGGCAAGTTGGCAGATGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: NSKADWEGLGER*SRDCGKLADAD Trigger: ATCTGCATCTGCCAACTTGCCACAGTCCCTGGACAACCTCTCACCCAATCCTTCCCAGTCAGCCTTGCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CAA 90 bp | CCTCCCACTGGGAAGCCCGTCATGTCTGATGGTCTCTCTTTGTCCTaGACACACCATCTTGCATTGGTTACTACTTACTGTCTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PPTGKPVMSDGLSLS*THHLALVTTYCLLG Trigger: GCCCAGGAGACAGTAAGTAGTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGACGGGCTTCCCAGTGGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS TCA 72 bp | TACCTGTGTGAGTTGAACTGCGCTTACACACATCACTaGAATATCCCACTCTCAGAAGTGGCCCAGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: YLCELNCAYTHH*NIPLSEVAQPP Trigger: GGGAGGCTGGGCCACTTCTGAGAGTGGGATATTTCAGTGATGTGTGTAAGCGCAGTTCAACTCACACAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615939.1 |
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| CDS CCA 72 bp | GAGATAGTGTCCAGAACAGGTTTGACTCTTAACATTTaGGGCTGGATCATTCCCTGGGGTGGGACGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EIVSRTGLTLNI*GWIIPWGGTCP Trigger: AGGACACGTCCCACCCCAGGGAATGATCCAGCCCCAAATGTTAAGAGTCAAACCTGTTCTGGACACTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CAA 90 bp | TGGTGTCCTCCCACTGGGAAGCCCGTCATGTCTGATGGTCTCTCTTaGTCCTTGACACACCATCTTGCATTGGTTACTACTTACTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: WCPPTGKPVMSDGLS*SLTHHLALVTTYCL Trigger: GAGACAGTAAGTAGTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGACGGGCTTCCCAGTGGGAGGACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS TCA 72 bp | TACCACAAGGTCCACAGCTGTGCTTGGCTTCGCTTTTaGGGAGTTTTGGTTCTGTTTGGAGGGTCTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: YHKVHSCAWLRF*GVLVLFGGSWE Trigger: TTCCCAAGACCCTCCAAACAGAACCAAAACTCCTCAAAAGCGAAGCCAAGCACAGCTGTGGACCTTGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CAA 72 bp | ATACCACAAGGTCCACAGCTGTGCTTGGCTTCGCTTTaGAGGAGTTTTGGTTCTGTTTGGAGGGTCTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: IPQGPQLCLASL*RSFGSVWRVLG Trigger: TCCCAAGACCCTCCAAACAGAACCAAAACTCCTCAAAAGCGAAGCCAAGCACAGCTGTGGACCTTGTGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598141.1 |
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| CDS CAA 72 bp | GATGGTCTCTCTTTGTCCTTGACACACCATCTTGCATaGGTTACTACTTACTGTCTCCTGGGCCTTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: DGLSLSLTHHLA*VTTYCLLGLGS Trigger: GCTTCCAAGGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CAA 90 bp | GTCATGTCTGATGGTCTCTCTTTGTCCTTGACACACCATCTTGCATaGGTTACTACTTACTGTCTCCTGGGCCTTGGAAGCTCATTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VMSDGLSLSLTHHLA*VTTYCLLGLGSSFC Trigger: ACAGAATGAGCTTCCAAGGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CAA 72 bp | GGGAAGCCCGTCATGTCTGATGGTCTCTCTTTGTCCTaGACACACCATCTTGCATTGGTTACTACTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: GKPVMSDGLSLS*THHLALVTTYC Trigger: ACAGTAAGTAGTAACCAATGCAAGATGGTGTGTCAAGGACAAAGAGAGACCATCAGACATGACGGGCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 72 bp | TCTTGCATTGGTTACTACTTACTGTCTCCTGGGCCTTaGAAGCTCATTCTGTCAGTTTCCAAAATACGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SCIGYYLLSPGP*KLILSVSKIRP Trigger: AGGGCGTATTTTGGAAACTGACAGAATGAGCTTCCAAGGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CAA 72 bp | ATCTTGCATTGGTTACTACTTACTGTCTCCTGGGCCTaGGAAGCTCATTCTGTCAGTTTCCAAAATACGCCC | + |
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Preference number: 6 (lower is better) Translates to: ILHWLLLTVSWA*EAHSVSFQNTP Trigger: GGGCGTATTTTGGAAACTGACAGAATGAGCTTCCAAGGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 72 bp | CACACCATCTTGCATTGGTTACTACTTACTGTCTCCTaGGCCTTGGAAGCTCATTCTGTCAGTTTCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: HTILHWLLLTVS*ALEAHSVSFQN Trigger: ATTTTGGAAACTGACAGAATGAGCTTCCAAGGCCCAGGAGACAGTAAGTAGTAACCAATGCAAGATGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CAA 90 bp | AGAATCGCTGGTCTATATATTTTATCGGCTTCAAACTCAACTTTTTaGGCAAAGATTCCTTATGGGTGGTGTGGTGTCCTCCCACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RIAGLYILSASNSTF*AKIPYGWCGVLPLG Trigger: TCCCAGTGGGAGGACACCACACCACCCATAAGGAATCTTTGCCAAAAAAGTTGAGTTTGAAGCCGATAAAATATATAGACCAGCGATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 72 bp | ACAGTGATATCTCAGTGTCATCAGGAATCTGGGCAGTaGCTCAATTCTGTCTCACAATGTCAAAAATGTGTT | + |
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Preference number: 6 (lower is better) Translates to: TVISQCHQESGQ*LNSVSQCQKCV Trigger: AACACATTTTTGACATTGTGAGACAGAATTGAGCCACTGCCCAGATTCCTGATGACACTGAGATATCACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CCA 72 bp | TTAAGTGACAGTGATATCTCAGTGTCATCAGGAATCTaGGCAGTGGCTCAATTCTGTCTCACAATGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LSDSDISVSSGI*AVAQFCLTMSK Trigger: TTTTGACATTGTGAGACAGAATTGAGCCACTGCCCAGATTCCTGATGACACTGAGATATCACTGTCACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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| CDS CAA 72 bp | GGTCTATATATTTTATCGGCTTCAAACTCAACTTTTTaGGCAAAGATTCCTTATGGGTGGTGTGGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLYILSASNSTF*AKIPYGWCGVL Trigger: GAGGACACCACACCACCCATAAGGAATCTTTGCCAAAAAAGTTGAGTTTGAAGCCGATAAAATATATAGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655024.1 |
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