Pregenerated sensors for PGK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000170950Ensembl transcript IDs: ENST00000304801.6
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCTAGGAGTAGATGTAAAAGCATTAAGCTaGCTTAAGGGCCATGGACAG | + |
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Preference number: 2 (lower is better) Translates to: VPDGLLLVHYIGLDLGVDVKALS*LKGHGQ Trigger: CTGTCCATGGCCCTTAAGTCAGCTTAATGCTTTTAC...ATCTACTCCTAGATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | GTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCTAGGAGTAGATCCCACCATGGAACTATaGGCGCGGTGTGCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VPDGLLLVHYIGLDLGVDPTMEL*ARCAVP Trigger: TGGCACTGCACACCGCGCTCATAGTTCCATGGTGGG...ATCTACTCCTAGATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATGAACCAACTTGCTGTTaGGGGGCTGGGTCGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDEPTCC*GAGSVV Trigger: CACCACCGACCCAGCCCCTCAACAGCAAGTTGGTTC...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | GTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCTAGGAGTAGATTGTCCAGGCAGTACTTaGTGCTTGGGATGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VPDGLLLVHYIGLDLGVDCPGST*CLGWKP Trigger: AGGCTTCCATCCCAAGCATCAAGTACTGCCTGGACA...ATCTACTCCTAGATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | GCTGTGCTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTTGCCAGATGCTACAGTaGCTTTTCCAACCTGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: AVLILRVPDGLLLVHYIGCQMLQ*LFQPER Trigger: ACGCTCAGGTTGGAAAAGCCACTGTAGCATCTGGCA...ACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAGCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATTGCCCAGCAAGGATTTaGGCTCAACAGCAACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDCPARI*AQQQQV Trigger: CACCTGTTGCTGTTGAGCTCAAATCCTTGCTGGGCA...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATTCAGGCCGACCTAGATaGCTCATAAGAACTACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDSGRPR*LIRTTA Trigger: GGCAGTAGTTCTTATGAGTCATCTAGGTCGGCCTGA...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATAATCCGGATGCTTTATaGGGCAGATTCACTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDNPDAL*GRFTPT Trigger: GGTGGGAGTGAATCTGCCCCATAAAGCATCCGGATT...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATGATATTAAGAGTTCCTaGTGGCCTGCTGCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDDIKSS*WPAACP Trigger: TGGACAAGCAGCAGGCCATCAGGAACTCTTAATATC...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTGATTCACTCCCACCATaGAACTATGAGCGCGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NENLNRQMRDQTKMNCCADSLPP*NYERGV Trigger: CACACCGCGCTCATAGTTCCATGGTGGGAGTGAATC...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCAGAAAGGGTCTCACTaGGTTTTCCAAGGCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDQKGSH*VFQGFS Trigger: GCTAAAGCCTTGGAAAACCCAGTGAGACCCTTTCTG...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | GCTGTGCTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTTATAAAGACATAGGCTaGCACCTGGATCTTAATGCT | + |
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Preference number: 4 (lower is better) Translates to: AVLILRVPDGLLLVHYIGYKDIG*HLDLNA Trigger: AGCATTAAGATCCAGGTGTCAGCCTATGTCTTTATA...ACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAGCACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATGTTCAAATGAGAACTTaGACAGGCAAATGCGTGACC | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDVQMRT*TGKCVT Trigger: GGTCACGCATTTGCCTGTTCAAGTTCTCATTTGAAC...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR GCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCATCAAGAATCCGGATaGTTTATGGGGCAGATTCAC | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDHQESG*FMGQIH Trigger: GTGAATCTGCCCCATAAAGCATCCGGATTCTTGATG...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATTGCAGCCCTTGGAAGTaGCTTTCACAATTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: LILRVPDGLLLVHYIGLDCSPWK*LSQFHP Trigger: TGGATGAAATTGTGAAAGCCACTTCCAAGGGCTGCA...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGGTGGCTTTTCCAACCTaGGCGTTCTCGTCAAACTTG | + |
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Preference number: 4 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMVAFPT*AFSSNL Trigger: CAAGTTTGACGAGAACGCTCAGGTTGGAAAAGCCAC...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR GCA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTACTATGAGCGCGGTGTaGAGTGCCAAAAGCATCATT | + |
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Preference number: 4 (lower is better) Translates to: NENLNRQMRDQTKMNCCATMSAV*SAKSII Trigger: AATGATGCTTTTGGCACTGCACACCGCGCTCATAGT...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR GCA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTAAGTTGGATCTTGTCTaGCACTTTGGCTCCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: NENLNRQMRDQTKMNCCAKLDLV*HFGSTK Trigger: CTTGGTGGAGCCAAAGTGGCAGACAAGATCCAACTT...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR GCA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGTCCAGCCAGGAGATATaGCAGATGCTACAGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMSSQEI*QMLQWL Trigger: AAGCCACTGTAGCATCTGGCATATCTCCTGGCTGGA...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTGCAGTACTTGATGCTTaGGATGGAAGCCTTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: NENLNRQMRDQTKMNCCAAVLDA*DGSLDP Trigger: AGGATCAAGGCTTCCATCCCAAGCATCAAGTACTGC...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGGTGTTAACTACATGTTGCTaGGGGCCTCTACTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TFFNRQLKNMSSLDSTMVLTTCC*GPLLQE Trigger: TTCCTGGAGTAGAGGCCCTCAGCAACATGTAGTTAA...CACCATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR TCA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTGTAAAAGCATTAAGCTaGCTTAAGGGCCATGGACAG | + |
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Preference number: 4 (lower is better) Translates to: NENLNRQMRDQTKMNCCAVKALS*LKGHGQ Trigger: CTGTCCATGGCCCTTAAGTCAGCTTAATGCTTTTAC...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR GCA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGAGGAGATATGCCAGATaGTACAGTGGCTTTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMRRYAR*YSGFSN Trigger: GTTGGAAAAGCCACTGTAGCATCTGGCATATCTCCT...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGGTGGAAGCCTTGATCCTCTaGTTGTTTGTAATCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TFFNRQLKNMSSLDSTMVEALIL*LFVIWF Trigger: GAACCAGATTACAAACAACCAGAGGATCAAGGCTTC...CACCATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR GCA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTTACACCATTCTTTTGTaGTTTGGCCATGATATCTTT | + |
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Preference number: 4 (lower is better) Translates to: NENLNRQMRDQTKMNCCAYTILL*FGHDIF Trigger: AAAGATATCATGGCCAAAGCACAAAAGAATGGTGTA...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATAGAACCAACTTGCTGTaGAGGGGCTGGGTCGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LILRVPDGLLLVHYIGLDRTNLL*RGWVGG Trigger: ACCACCGACCCAGCCCCTCAACAGCAAGTTGGTTCT...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATTTGTCCAGGCAGTACTaGATGCTTGGGATGGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: LILRVPDGLLLVHYIGLDLSRQY*MLGMEA Trigger: GGCTTCCATCCCAAGCATCAAGTACTGCCTGGACAA...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCTTGGGATGGAAGCCTaGATCCTCTGGTTGTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LILRVPDGLLLVHYIGLDLGMEA*ILWLFV Trigger: TACAAACAACCAGAGGATCAAGGCTTCCATCCCAAG...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | GTGCTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTTCCAAACAATTAGCCTaGCTTGAGCCACAACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VLILRVPDGLLLVHYIGLSKQLA*LEPQLE Trigger: CTCAAGTTGTGGCTCAAGCAAGGCTAATTGTTTGGA...AAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | GTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCTAGGAGTAGATAGTTCAAATGAGAACTaGAACAGGCAAATGCGTGAC | + |
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Preference number: 5 (lower is better) Translates to: VPDGLLLVHYIGLDLGVDSSNEN*NRQMRD Trigger: GTCACGCATTTGCCTGTTCAAGTTCTCATTTGAACT...ATCTACTCCTAGATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | GTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATCTAGGAGTAGATCCTCTAACATCCAGTTaGTCTAAAGTCAACTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: VPDGLLLVHYIGLDLGVDPLTSS*SKVNFL Trigger: TAAGAAGTTGACTTTAGACAAACTGGATGTTAGAGG...ATCTACTCCTAGATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGTTGCCCAGCAAGGATTaGAGCTCAACAGCAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMLPSKD*SSTATG Trigger: ACCTGTTGCTGTTGAGCTCAAATCCTTGCTGGGCAA...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGATCTTGTCTGCCACTTaGGCTCCACCAAGTATAGCC | + |
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Preference number: 5 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMILSAT*APPSIA Trigger: GGCTATACTTGGTGGAGCCAAAGTGGCAGACAAGAT...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTGATATTAAGAGTTCCTGATGGCCTGCTGCTTGTCCATTACATAGGTCTTGATTATATTAACTACATGTaGCTGAGGGCCTCTACTCCA | + |
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Preference number: 5 (lower is better) Translates to: LILRVPDGLLLVHYIGLDYINYM*LRASTP Trigger: TGGAGTAGAGGCCCTCAGCAACATGTAGTTAATATA...ATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAACTCTTAATATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTGCGTTCTCGTCAAACTaGTCCCCAGTAACAAAATCA | + |
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Preference number: 5 (lower is better) Translates to: NENLNRQMRDQTKMNCCAAFSSN*SPVTKS Trigger: TGATTTTGTTACTGGGGACAAGTTTGACGAGAACGC...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTTGCTTGAGCCACAACTaGAGCATGATTCTTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: NENLNRQMRDQTKMNCCACLSHN*SMILVA Trigger: AGCAACAAGAATCATGCTCAAGTTGTGGCTCAAGCA...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGGCCTTGATCCTCTGGTaGTTTGTAATCTGGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMALILW*FVIWFF Trigger: GAAGAACCAGATTACAAACAACCAGAGGATCAAGGC...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | AATGAGAACTTGAACAGGCAAATGCGTGACCAAACTAAAATGAATTGCTGTGCTCCTTACACCATTCTTTaGTGCTTTGGCCATGATATC | + |
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Preference number: 5 (lower is better) Translates to: NENLNRQMRDQTKMNCCAPYTIL*CFGHDI Trigger: GATATCATGGCCAAAGCACAAAAGAATGGTGTAAGG...AGCACAGCAATTCATTTTAGTTTGGTCACGCATTTGCCTGTTCAAGTTCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGGTGTTCTTCATGGGAACATaGAAGTCTACTCTCATGATG | + |
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Preference number: 5 (lower is better) Translates to: TFFNRQLKNMSSLDSTMVFFMGT*KSTLMM Trigger: CATCATGAGAGTAGACTTCAATGTTCCCATGAAGAA...CACCATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS-3UTR CAA 90 bp | CTCACTTTCTTTAATAGGCAACTTAAGAATATGTCCTCCCTAGATAGCACAATGCCATTCTTTTGTGCTTaGGCCATGATATCTTTAACG | + |
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Preference number: 5 (lower is better) Translates to: LTFFNRQLKNMSSLDSTMPFFCA*AMISLT Trigger: CGTTAAAGATATCATGGCCAAAGCACAAAAGAATGG...CATTGTGCTATCTAGGGAGGACATATTCTTAAGTTGCCTATTAAAGAAAGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS TCA 72 bp | CACCTGGATCTTAATGCTGAAGAACCAACTTGCTGTTaGGGGGCTGGGTCGGTGGTGACTTCTAACGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: HLDLNAEEPTCC*GAGSVVTSNAF Trigger: AAAGGCGTTAGAAGTCACCACCGACCCAGCCCCTCAACAGCAAGTTGGTTCTTCAGCATTAAGATCCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS CAA 72 bp | CAAATACTCCTAACGGCCCATTCCAAACAATTAGCCTaGCTTGAGCCACAACTTGAGCATGATTCTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: QILLTAHSKQLA*LEPQLEHDSCC Trigger: GCAACAAGAATCATGCTCAAGTTGTGGCTCAAGCAAGGCTAATTGTTTGGAATGGGCCGTTAGGAGTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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| CDS CAA 72 bp | ACTCTCATGATGACTCGCTTCCCTCTAACATCCAGTTaGTCTAAAGTCAACTTCTTAGAAAGAGACATCTTG | + |
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Preference number: 6 (lower is better) Translates to: TLMMTRFPLTSS*SKVNFLERDIL Trigger: CAAGATGTCTCTTTCTAAGAAGTTGACTTTAGACAAACTGGATGTTAGAGGGAAGCGAGTCATCATGAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304801.6 |
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