Pregenerated sensors for PGD (Homo sapiens)
Ensembl gene IDs: ENSG00000142657Ensembl transcript IDs: ENST00000270776.13, ENST00000465632.5, ENST00000487775.1, ENST00000491493.5, ENST00000493288.1, ENST00000496718.1, ENST00000498356.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATGTAGCTCCCTTCCTGTCTGCGTaGTGGGAACCGCACCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CGRGETKNLEKEHQSDVAPFLSA*WEPHQH Trigger: GTGCTGGTGCGGTTCCCATCACGCAGACAGGAAGGG...AGCTACATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| 3UTR-3UTR GCA 90 bp | AGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTCTGGTGTGTCCTCCCTaGCTGCCTCCTCTGAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SERPCTHCPIGERKHAQCLVCPP*LPPLSE Trigger: TTCACTCAGAGGAGGCAGGCAGGGAGGACACACCAG...ACACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTCCTGCCTCCTCTGAGTaGAGCATAATCCTAAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: TVNVHVPIAQLEKENMPSPASSE*SIILNV Trigger: CACATTTAGGATTATGCTTCACTCAGAGGAGGCAGG...ACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTGTGAGACTAAGAATCTaGAGAAAGAGCATCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SERPCTHCPIGERKHAQCVRLRI*RKSISL Trigger: CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCAC...ACACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGAGCGCGATGTCAGCTTaGGCCATGGCGGCGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLHVAEVRLRIWRKSISLSAMSA*AMAADR Trigger: TCTGTCCGCCGCCATGGCCCAAGCTGACATCGCGCT...CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR TCA 90 bp | GCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATCCCTTCCTGTCTGCGTaGTGGGAACCGCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: APCGRGETKNLEKEHQSDPFLSA*WEPHQH Trigger: GTGCTGGTGCGGTTCCCATCACGCAGACAGGAAGGG...ATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGCTGGTGTGTCCTCCCTaGCTGCCTCCTCTGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLHVAEVRLRIWRKSISLLVCPP*LPPLSE Trigger: TTCACTCAGAGGAGGCAGGCAGGGAGGACACACCAG...CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | GCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATCAATCCTCAAAGGCCTaGGCCATCTCGTCCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: APCGRGETKNLEKEHQSDQSSKA*AISSCA Trigger: GGCGCAGGACGAGATGGCCCAGGCCTTTGAGGATTG...ATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR TCA 90 bp | AGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTTGTTCCCTCCTGGCATaGGCGATGGGCCATACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SERPCTHCPIGERKHAQCCSLLA*AMGHTG Trigger: CCCGGTATGGCCCATCGCTCATGCCAGGAGGGAACA...ACACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGCCTGCCTGCCTCCTCTaGGTGAAGCATAATCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLHVAEVRLRIWRKSISLPACLL*VKHNPK Trigger: TTTAGGATTATGCTTCACTCAGAGGAGGCAGGCAGG...CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR GCA 90 bp | GCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATTTGGCAGCAGGTGTTTaGCATCGGTGTCTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: APCGRGETKNLEKEHQSDLAAGV*HRCLGT Trigger: AGTTCCAAGACACCGATGGCAAACACCTGCTGCCAA...ATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | GCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATCTGGATGAGGCTGGCTaGAAGCATCTCATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: APCGRGETKNLEKEHQSDLDEAG*KHLMSV Trigger: TACAGACATGAGATGCTTCCAGCCAGCCTCATCCAG...ATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTCTTGGAAGCGTAGAGTaGCTTCCGAATGTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVNVHVPIAQLEKENMPSLGSVE*LPNVLQ Trigger: CTGGAGGACATTCGGAAGGCACTCTACGCTTCCAAG...ACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATGTAGCTCTCGGCACCGTCTTGTaGTGTCCCTATATTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CGRGETKNLEKEHQSDVALGTVL*CPYIQN Trigger: ATTCTGAATATAGGGACACCACAAGACGGTGCCGAG...AGCTACATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATGTAGCTGTACCAATTTCTCGATaGAATCATCCACAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGRGETKNLEKEHQSDVAVPISR*NHPQLA Trigger: GGCAAGCTGTGGATGATTTCATCGAGAAATTGGTAC...AGCTACATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR TCA 90 bp | AGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTCTTGAGCGTAAGAGATaGTCTTGGAAGCGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SERPCTHCPIGERKHAQCLERKR*SWKRRV Trigger: CACTCTACGCTTCCAAGATCATCTCTTACGCTCAAG...ACACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR TCA 90 bp | AGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTCCTGCCTCCTCTGAGTaGAGCATAATCCTAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SERPCTHCPIGERKHAQCPASSE*SIILNV Trigger: CACATTTAGGATTATGCTTCACTCAGAGGAGGCAGG...ACACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR GCA 90 bp | AGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTTACTCTATCCCGTTGTaGACCATCTTCACGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SERPCTHCPIGERKHAQCYSIPL*TIFTKW Trigger: CCACTTCGTGAAGATGGTGCACAACGGGATAGAGTA...ACACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTAAGATGGTCTTGATGTaGGGCCACGCTTCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVNVHVPIAQLEKENMPSKMVLM*GHASLF Trigger: GAACAAAGAAGCGTGGCCCCACATCAAGACCATCTT...ACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGACCAGTATCCAACAATaGTACCAATTTCTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLHVAEVRLRIWRKSISLTSIQQ*YQFLDE Trigger: TTCATCGAGAAATTGGTACCATTGTTGGATACTGGT...CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATGTAGCTTACCCATTGCCCAATTaGAGAAAGAAAACATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRGETKNLEKEHQSDVAYPLPN*RKKTCP Trigger: TGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTA...AGCTACATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAACGTCCATGTACCCATTGCCCAATTGGAGAAAGAAAACATGCCCAGTGTGAGACTAAGAATCTaGAGAAAGAGCATCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVNVHVPIAQLEKENMPSVRLRI*RKSISL Trigger: CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCAC...ACTGGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTACATGGACGTTCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS GCA 90 bp | GCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTGCGGTGCACCGTaGGGGTCCGCGTCGTGTCCTCCGCTCCGGAGCAGGGACCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARAPVAPSSGHCGAP*GSASCPPLRSRDRA Trigger: CGCCCGGTCCCTGCTCCGGAGCGGAGGACACGACGCGGACCCGCACGGTGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS GCA 90 bp | CGGACGCCTTTGGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTaGGGTGCACCGTGCGGGTCCGCGTCGTGTCCTCCGCTCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTPLARAPVAPSSGH*GAPCGSASCPPLRS Trigger: GCTCCGGAGCGGAGGACACGACGCGGACCCGCACGGTGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAAAGGCGTCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS GCA 90 bp | GCCTTTGGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTGCGGTaGACCGTGCGGGTCCGCGTCGTGTCCTCCGCTCCGGAGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AFGASARRSFLRSLR*TVRVRVVSSAPEQG Trigger: TCCCTGCTCCGGAGCGGAGGACACGACGCGGACCCGCACGGTGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAAAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS CCA 90 bp | GCTGCAGGACCGCGCTTTACAGTTTACCAGGCACTCGGACGCCTTTaGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTGCGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGPRFTVYQALGRL*RERPSLLPQVTAVH Trigger: GTGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAAAGGCGTCCGAGTGCCTGGTAAACTGTAAAGCGCGGTCCTGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS GCA 90 bp | AAGGAAGCCCCTTGTCCAATGTCCACGCTGACCAATGCTCACGGTTaGCAGCAGGCTCTGCTCGCGTCTGCCTGGGGACTTCTGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KEAPCPMSTLTNAHG*QQALLASAWGLLLL Trigger: CAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGCATTGGTCAGCGTGGACATTGGACAAGGGGCTTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS-3UTR CAA 90 bp | TGGCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGCAGCGCGATGTCAGCTaGGGCCATGGCGGCGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: WLHVAEVRLRIWRKSISLQRDVS*GHGGGQ Trigger: CTGTCCGCCGCCATGGCCCAAGCTGACATCGCGCTG...CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS GCA 90 bp | CGGCCCGCCCACGCCTACAGGGTGCTTCTCCTTTCCATACAAAAATaGCACGAGCAGCAACAGAGCACATTAGCAAAGCACGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPAHAYRVLLLSIQK*HEQQQSTLAKHGQE Trigger: CTCCTGGCCGTGCTTTGCTAATGTGCTCTGTTGCTGCTCGTGGCATTTTTGTATGGAAAGGAGAAGCACCCTGTAGGCGTGGGCGGGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487775.1 |
||
| CDS GCA 90 bp | CTCCGCAGGACTAAGTTCGGGATCGGCCCGCCCACGCCTACAGGGTaGTTCTCCTTTCCATACAAAAATGCCACGAGCAGCAACAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRRTKFGIGPPTPTG*FSFPYKNATSSNRA Trigger: TGCTCTGTTGCTGCTCGTGGCATTTTTGTATGGAAAGGAGAAGCACCCTGTAGGCGTGGGCGGGCCGATCCCGAACTTAGTCCTGCGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487775.1 |
||
| CDS CCA 90 bp | CTGACCAATGCTCACGGTTGCCAGCAGGCTCTGCTCGCGTCTGCCTaGGGACTTCTGCTCCTGCTGGTTGAGTTTTATGCTAACCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTNAHGCQQALLASA*GLLLLLVEFYANPE Trigger: CTCTGGGTTAGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGCATTGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS GCA 90 bp | CTCACGGTTGCCAGCAGGCTCTGCTCGCGTCTGCCTGGGGACTTCTaGTCCTGCTGGTTGAGTTTTATGCTAACCCAGAGTCAGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTVASRLCSRLPGDF*SCWLSFMLTQSQLC Trigger: ACACAACTGACTCTGGGTTAGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS GCA 90 bp | GTTGCCAGCAGGCTCTGCTCGCGTCTGCCTGGGGACTTCTGCTCCTaGTGGTTGAGTTTTATGCTAACCCAGAGTCAGTTGTGTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VASRLCSRLPGDFCS*WLSFMLTQSQLCLF Trigger: GAACAAACACAACTGACTCTGGGTTAGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS TCA 90 bp | CAAAGGCCTACATGCAGAACACAGGAGAGAACCATGTTAGAGGAATaGGGGCTGAGCAAGGAAGCCCCTTGTCCAATGTCCACGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QRPTCRTQERTMLEE*GLSKEAPCPMSTLT Trigger: GGTCAGCGTGGACATTGGACAAGGGGCTTCCTTGCTCAGCCCTCATTCCTCTAACATGGTTCTCTCCTGTGTTCTGCATGTAGGCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS-3UTR CAA 90 bp | GCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGATGGTCTCGGCACCGTCTaGTGGTGTCCCTATATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: APCGRGETKNLEKEHQSDGLGTV*WCPYIQ Trigger: CTGAATATAGGGACACCACAAGACGGTGCCGAGACC...ATCAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS-3UTR CAA 90 bp | TGGCTCCATGTGGCCGAGGTGAGACTAAGAATCTGGAGAAAGAGCATCAGTCTGGTACCCATTGCCCAATaGGAGAAAGAAAACATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLHVAEVRLRIWRKSISLVPIAQ*EKENMP Trigger: GGGCATGTTTTCTTTCTCCAATTGGGCAATGGGTAC...CAGACTGATGCTCTTTCTCCAGATTCTTAGTCTCACCTCGGCCACATGGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270776.13 |
||
| CDS GCA 72 bp | GCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTGCGGTaGACCGTGCGGGTCCGCGTCGTGTCCTCCGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASARRSFLRSLR*TVRVRVVSSAP Trigger: CGGAGCGGAGGACACGACGCGGACCCGCACGGTGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS GCA 72 bp | CCCGTCGCTCCTTCCTCAGGTCACTGCGGTGCACCGTaGGGGTCCGCGTCGTGTCCTCCGCTCCGGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVAPSSGHCGAP*GSASCPPLRSR Trigger: CCTGCTCCGGAGCGGAGGACACGACGCGGACCCGCACGGTGCACCGCAGTGACCTGAGGAAGGAGCGACGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS GCA 72 bp | TTGGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTaGGGTGCACCGTGCGGGTCCGCGTCGTGTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LARAPVAPSSGH*GAPCGSASCPP Trigger: CGGAGGACACGACGCGGACCCGCACGGTGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS CAA 90 bp | GCACCGCTCGACGCGCTGCAACCCAGGGGTCCGGTCCTTCCACATTaGGCCGTGACTGGGAGTCTGCACTTTCCTCCGCGCCTCCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: APLDALQPRGPVLPH*AVTGSLHFPPRLPR Trigger: CCGCGGGAGGCGCGGAGGAAAGTGCAGACTCCCAGTCACGGCCAAATGTGGAAGGACCGGACCCCTGGGTTGCAGCGCGTCGAGCGGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465632.5 |
||
| CDS CCA 72 bp | ACCCAGGGGTCCGGTCCTTCCACATTTGGCCGTGACTaGGAGTCTGCACTTTCCTCCGCGCCTCCCGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TQGSGPSTFGRD*ESALSSAPPAG Trigger: GCCCGCGGGAGGCGCGGAGGAAAGTGCAGACTCCCAGTCACGGCCAAATGTGGAAGGACCGGACCCCTGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465632.5 |
||
| CDS TCA 72 bp | TGCAACCCAGGGGTCCGGTCCTTCCACATTTGGCCGTaGCTGGGAGTCTGCACTTTCCTCCGCGCCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CNPGVRSFHIWP*LGVCTFLRASR Trigger: GCGGGAGGCGCGGAGGAAAGTGCAGACTCCCAGTCACGGCCAAATGTGGAAGGACCGGACCCCTGGGTTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465632.5 |
||
| CDS CAA 72 bp | GACGCGCTGCAACCCAGGGGTCCGGTCCTTCCACATTaGGCCGTGACTGGGAGTCTGCACTTTCCTCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DALQPRGPVLPH*AVTGSLHFPPR Trigger: GCGCGGAGGAAAGTGCAGACTCCCAGTCACGGCCAAATGTGGAAGGACCGGACCCCTGGGTTGCAGCGCGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465632.5 |
||
| CDS CAA 90 bp | AGCTGCAGGACCGCGCTTTACAGTTTACCAGGCACTCGGACGCCTTaGGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACTGCGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRTALYSLPGTRTP*ARAPVAPSSGHCGA Trigger: TGCACCGCAGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAAAGGCGTCCGAGTGCCTGGTAAACTGTAAAGCGCGGTCCTGCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS CCA 72 bp | CCGCGCTTTACAGTTTACCAGGCACTCGGACGCCTTTaGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PRFTVYQALGRL*RERPSLLPQVT Trigger: AGTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAAAGGCGTCCGAGTGCCTGGTAAACTGTAAAGCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS CAA 72 bp | ACCGCGCTTTACAGTTTACCAGGCACTCGGACGCCTTaGGCGCGAGCGCCCGTCGCTCCTTCCTCAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TALYSLPGTRTP*ARAPVAPSSGH Trigger: GTGACCTGAGGAAGGAGCGACGGGCGCTCGCGCCAAAGGCGTCCGAGTGCCTGGTAAACTGTAAAGCGCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491493.5 |
||
| CDS CCA 72 bp | GTAATCCCGCTGAGCCTAGGAAACGAGAGAGTAGGTTaGTCAGGACAGTCCATGGCGCACGCCCCCGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VIPLSLGNERVG*SGQSMAHAPEG Trigger: CCCCTCGGGGGCGTGCGCCATGGACTGTCCTGACCAACCTACTCTCTCGTTTCCTAGGCTCAGCGGGATTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496718.1 |
||
| CDS CAA 72 bp | CCCTTGTCCAATGTCCACGCTGACCAATGCTCACGGTaGCCAGCAGGCTCTGCTCGCGTCTGCCTGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PLSNVHADQCSR*PAGSARVCLGT Trigger: AGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGCATTGGTCAGCGTGGACATTGGACAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS CAA 90 bp | CAAGGAAGCCCCTTGTCCAATGTCCACGCTGACCAATGCTCACGGTaGCCAGCAGGCTCTGCTCGCGTCTGCCTGGGGACTTCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QGSPLSNVHADQCSR*PAGSARVCLGTSAP Trigger: AGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGCATTGGTCAGCGTGGACATTGGACAAGGGGCTTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS GCA 72 bp | CAGAACAAAGGAAAGAGTCAGCACCGCTCGACGCGCTaGAACCCAGGGGTCCGGTCCTTCCACATTTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QNKGKSQHRSTR*NPGVRSFHIWP Trigger: CGGCCAAATGTGGAAGGACCGGACCCCTGGGTTGCAGCGCGTCGAGCGGTGCTGACTCTTTCCTTTGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465632.5 |
||
| CDS GCA 72 bp | CCTTGTCCAATGTCCACGCTGACCAATGCTCACGGTTaGCAGCAGGCTCTGCTCGCGTCTGCCTGGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: PCPMSTLTNAHG*QQALLASAWGL Trigger: AAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGCATTGGTCAGCGTGGACATTGGACAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS GCA 72 bp | CAAGGAAGCCCCTTGTCCAATGTCCACGCTGACCAATaGTCACGGTTGCCAGCAGGCTCTGCTCGCGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSPLSNVHADQ*SRLPAGSARVC Trigger: GCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGCATTGGTCAGCGTGGACATTGGACAAGGGGCTTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS CAA 72 bp | AGTAATCCCGCTGAGCCTAGGAAACGAGAGAGTAGGTaGGTCAGGACAGTCCATGGCGCACGCCCCCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SNPAEPRKRESR*VRTVHGARPRG Trigger: CCCTCGGGGGCGTGCGCCATGGACTGTCCTGACCAACCTACTCTCTCGTTTCCTAGGCTCAGCGGGATTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496718.1 |
||
| CDS CCA 72 bp | GCTCACGGTTGCCAGCAGGCTCTGCTCGCGTCTGCCTaGGGACTTCTGCTCCTGCTGGTTGAGTTTTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHGCQQALLASA*GLLLLLVEFYA Trigger: AGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCTGCTGGCAACCGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS CAA 90 bp | GGAGAGAACCATGTTAGAGGAATGAGGGCTGAGCAAGGAAGCCCCTaGTCCAATGTCCACGCTGACCAATGCTCACGGTTGCCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GENHVRGMRAEQGSP*SNVHADQCSRLPAG Trigger: GCCTGCTGGCAACCGTGAGCATTGGTCAGCGTGGACATTGGACAAGGGGCTTCCTTGCTCAGCCCTCATTCCTCTAACATGGTTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS GCA 72 bp | ACTAAGTTCGGGATCGGCCCGCCCACGCCTACAGGGTaGTTCTCCTTTCCATACAAAAATGCCACGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TKFGIGPPTPTG*FSFPYKNATSS Trigger: GCTGCTCGTGGCATTTTTGTATGGAAAGGAGAAGCACCCTGTAGGCGTGGGCGGGCCGATCCCGAACTTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487775.1 |
||
| CDS GCA 72 bp | AGGCTCTGCTCGCGTCTGCCTGGGGACTTCTGCTCCTaGTGGTTGAGTTTTATGCTAACCCAGAGTCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLCSRLPGDFCS*WLSFMLTQSQL Trigger: CAACTGACTCTGGGTTAGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS CCA 72 bp | CTCTGCTCGCGTCTGCCTGGGGACTTCTGCTCCTGCTaGTTGAGTTTTATGCTAACCCAGAGTCAGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCSRLPGDFCSC*LSFMLTQSQLC Trigger: ACACAACTGACTCTGGGTTAGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS TCA 72 bp | TCTCTACTTAAGACACTAATTCGTTCATTCGGGCTGTaGACCTCACGGACCCACAGGCACACTCCGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLKTLIRSFGL*TSRTHRHTPQD Trigger: GTCCTGCGGAGTGTGCCTGTGGGTCCGTGAGGTTCACAGCCCGAATGAACGAATTAGTGTCTTAAGTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487775.1 |
||
| CDS CAA 72 bp | TGCTCGCGTCTGCCTGGGGACTTCTGCTCCTGCTGGTaGAGTTTTATGCTAACCCAGAGTCAGTTGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSRLPGDFCSCW*SFMLTQSQLCL Trigger: CAAACACAACTGACTCTGGGTTAGCATAAAACTCAACCAGCAGGAGCAGAAGTCCCCAGGCAGACGCGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493288.1 |
||
| CDS GCA 72 bp | CACGCCTACAGGGTGCTTCTCCTTTCCATACAAAAATaGCACGAGCAGCAACAGAGCACATTAGCAAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HAYRVLLLSIQK*HEQQQSTLAKH Trigger: GTGCTTTGCTAATGTGCTCTGTTGCTGCTCGTGGCATTTTTGTATGGAAAGGAGAAGCACCCTGTAGGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487775.1 |
||
| CDS CAA 90 bp | AGCAAAGACAGCTTCTCACATATACTTGAGTCCGTGATGAATAAATaGCTCCTAGCTATTGGCCCCTCCCTCCTCACCTATGTTATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKDSFSHILESVMNK*LLAIGPSLLTYVMA Trigger: AGCCATAACATAGGTGAGGAGGGAGGGGCCAATAGCTAGGAGCAATTTATTCATCACGGACTCAAGTATATGTGAGAAGCTGTCTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498356.1 |
||
| CDS CAA 72 bp | AGCTTCTCACATATACTTGAGTCCGTGATGAATAAATaGCTCCTAGCTATTGGCCCCTCCCTCCTCACCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SFSHILESVMNK*LLAIGPSLLTY Trigger: ATAGGTGAGGAGGGAGGGGCCAATAGCTAGGAGCAATTTATTCATCACGGACTCAAGTATATGTGAGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498356.1 |
||