Pregenerated sensors for PGC (Homo sapiens)
Ensembl gene IDs: ENSG00000096088Ensembl transcript IDs: ENST00000356667.8, ENST00000373025.7, ENST00000415707.1, ENST00000425343.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTAGAGAAAGTCCAGAGTCCAGAAAAAGAAGGCTGAATCCAGAGTaGAAAGACAGATACAATGCCCTAGGAGGGTGCAGGGTCAAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: IRESPESRKRRLNPE*KDRYNALGGCRVKR Trigger: CCTCTTGACCCTGCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTGGACTCTGGACTTTCTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCCACCAGCCGGAGGCCTaGCCGCCGATGAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCHQPEA*PPMRNS Trigger: AGAGTTCCTCATCGGCGGCCAGGCCTCCGGCTGGTG...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGGGTTGAAGCGGGAGTaGCTGGTGCAGGCCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGGLKRE*LVQAWL Trigger: GAGCCAGGCCTGCACCAGTCACTCCCGCTTCAACCC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAGCGGGAGTGACTGGTaGAGGCCTGGCTCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCSGSDW*RPGSGS Trigger: ACTGCCAGAGCCAGGCCTGCACCAGTCACTCCCGCT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGGAGGACAGGTAGGTaGGCTCGACTCCCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRGRTGR*ARLPRC Trigger: GCACCGTGGGAGTCGAGCCCACCTACCTGTCCTCCC...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAGGATCCACAGGGGCTaGCCGTTCTGGGAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCRIHRG*PFWEDR Trigger: CCTGTCCTCCCAGAACGGCCAGCCCCTGTGGATCCT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGACGACTCGCTGGGGTTaGAGCGGGAGTGACTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGTTRWG*SGSDWC Trigger: GCACCAGTCACTCCCGCTTCAACCCCAGCGAGTCGT...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGAGGGCGCCCTCCTaGACCATGCCCTGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRVRAPS*TMPCIA Trigger: AGCTATGCAGGGCATGGTGCAGGAGGGCGCCCTCAC...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCCCATACTCATCCTCCTaGGCCCCTGTGGCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCPYSSS*APVACR Trigger: TCTGCAGGCCACAGGGGCCCAGGAGGATGAGTATGG...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCCTGCCACTGCCATACTaGAGGGAGAAGGTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCLPLPY*REKVCP Trigger: TGGGCAGACCTTCTCCCTGCAGTATGGCAGTGGCAG...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCTGGGCCCCTGTGGCCTaGAGAAGAGCACTCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCWAPVA*RRALMY Trigger: GTACATGAGTGCTCTTCTGCAGGCCACAGGGGCCCA...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGCTGCCTCCAAGAGCTaGAGGCAGACCAAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGAASKS*RQTKTT Trigger: GGTGGTCTTGGTCTGCCTCCAGCTCTTGGAGGCAGC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAGGACCAGGAAGTTCTaGGGTGGAGTCCCGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCRTRKF*GGVPML Trigger: CAGCATCGGGACTCCACCCCAGAACTTCCTGGTCCT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCTCCTGGTTGGGGACCTaGATGCTCTGGACAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCSWLGT*MLWTVR Trigger: CCTGACTGTCCAGAGCATCCAGGTCCCCAACCAGGA...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGAGGAAGAGCAGCTCTaGGTTCTGCAGTCGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGEEEQL*VLQSQW Trigger: CCACTGCGACTGCAGAACTCAGAGCTGCTCTTCCTC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGCCACCATCCACTTCATaGTGCTGGTCCCCAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRPPSTS*CWSPTG Trigger: GCCAGTTGGGGACCAGCATCATGAAGTGGATGGTGG...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCTCTTCAGGGGCACTTTaGCCACTGCTGCCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCSSGAL*PLLPPR Trigger: TCTTGGAGGCAGCAGTGGTCAAAGTGCCCCTGAAGA...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGCTCGTAGGTCACGCTaGGGTCACCAAAGCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGARRSR*GHQSGT Trigger: AGTACCGCTTTGGTGACCTCAGCGTGACCTACGAGC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGAGCCAAAGAAGCCGGTaGGGCTGCCACTGCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRSQRSR*GCHCHT Trigger: AGTATGGCAGTGGCAGCCTCACCGGCTTCTTTGGCT...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGGGCACTTTGACCACTaGTGCCTCCAAGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGGHFDH*CLQELE Trigger: CTCCAGCTCTTGGAGGCAGCAGTGGTCAAAGTGCCC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGGTTGGGGACCTGGATaGTCTGGACAGTCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGGWGPG*SGQSGC Trigger: ACACCCTGACTGTCCAGAGCATCCAGGTCCCCAACC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGCCCCGTGTACAGGCTaGTATCCACACCCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRAPCTG*YPHPQR Trigger: TCTTTGGGGGTGTGGATAGCAGCCTGTACACGGGGC...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAATGCCCTAGGAGGGTaGAGGGTCAAGAGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCNALGG*RVKRKR Trigger: CCTCTTCCTCTTGACCCTGCACCCTCCTAGGGCATT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGAGCCGAACTCCTGGTTaGGGACCTGGATGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGSRTPG*GPGCSG Trigger: TCCAGAGCATCCAGGTCCCCAACCAGGAGTTCGGCT...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGCTCAAGCCGAACTCCTaGTTGGGGACCTGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRLKPNS*LGTWML Trigger: GAGCATCCAGGTCCCCAACCAGGAGTTCGGCTTGAG...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCCAGGAAGTTCTGGGGTaGAGTCCCGATGCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCQEVLG*SPDADL Trigger: GAGATCAGCATCGGGACTCCACCCCAGAACTTCCTG...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGAGGTCTGCCCATTGGTaGAGTAGGTGGACGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRRSAHW*SRWTTR Trigger: GCGAGTCGTCCACCTACTCCACCAATGGGCAGACCT...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGGAGTCCCGATGCTaGTCTCACCAAAGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRVESRC*SHQSRQ Trigger: CTGCCTACTTTGGTGAGATCAGCATCGGGACTCCAC...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGAGTAGAGTTCCTGGGTaGCAGGCGCCCAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRSRVPG*QAPSRS Trigger: AGATCTACTGGGCGCCTGTCACCCAGGAACTCTACT...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGCGGAATAGTAGGACCTaGGGAAGACATCCCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGRNSRT*GRHPRG Trigger: TCCTCGGGGATGTCTTCCTCAGGTCCTACTATTCCG...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGCACTTTGACCACTGCTaGCTCCAAGAGCTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRHFDHC*LQELEA Trigger: TGCCTCCAGCTCTTGGAGGCAGCAGTGGTCAAAGTG...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGCAGGATCATACTTGTaGGTCCTCAGGAACTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGAGSYL*VLRNSP Trigger: GGGGGAGTTCCTGAGGACCCACAAGTATGATCCTGC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAGAAGGTCTGCCCATTaGTGGAGTAGGTGGACGACT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCRRSAH*WSRWTT Trigger: AGTCGTCCACCTACTCCACCAATGGGCAGACCTTCT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGCACTCATGTACTGCTaGGGCACAGTGAGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGALMYC*GTVSRE Trigger: CTCTCTGCTCACTGTGCCCCAGCAGTACATGAGTGC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGAGAGCACTCATGTACTaGTGGGGCACAGTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGRALMY*WGTVSR Trigger: TCTGCTCACTGTGCCCCAGCAGTACATGAGTGCTCT...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAAGTCTAGGCGGCAGTaGCAAAGCCTACTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCKSRRQ*QSLLCC Trigger: ACAACAGAGTAGGCTTTGCCACTGCCGCCTAGACTT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCAGCCTACTCTGTTGTTaGCCAAGTCGTAGACGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLNPEWKDRYNALGGCSLLCC*PSRRRN Trigger: ATTCCGTCTACGACTTGGGCAACAACAGAGTAGGCT...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGAAAGACAGATACAATaGCCTAGGAGGGTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGERQIQ*PRRVQG Trigger: ACCCTGCACCCTCCTAGGGCATTGTATCTGTCTTTC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGGCGCATAGACGAAGTTaGTACCAGGCTCATTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGAHRRS*YQAHSH Trigger: GTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGC...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGAAGCTGGGCAGATTCTaGATGCTGTTACAGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: QKKKAESRVERQIQCPRRKLGRF*MLLQFT Trigger: CGTGAACTGTAACAGCATTCAGAATCTGCCCAGCTT...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGAGGCTGAATCCAGAGTaGAAAGACAGATACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGRLNPE*KDRYNA Trigger: GGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCT...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGGGCAGATTCTGAATaGTGTTACAGTTCACGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKRRLNPEWKDRYNALGGWADSE*CYSSRE Trigger: TTCTCGTGAACTGTAACAGCATTCAGAATCTGCCCA...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS CCA 90 bp | GGGACTGGGATGCGTCCCTTAGACTGGGGCTTTCTGGCCAGGCCTTaGAATTCCCAGCGCCTCAGGCTCCCGAATGATGCTGACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGMRPLDWGFLARP*NSQRLRLPNDADFW Trigger: CCAGAAGTCAGCATCATTCGGGAGCCTGAGGCGCTGGGAATTCCAAGGCCTGGCCAGAAAGCCCCAGTCTAAGGGACGCATCCCAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425343.6 |
||
| CDS TCA 90 bp | CCTCCAAGAGCTGGAGGCAGACCAAGACCACCACCATCCACTTCATaGTGCTGGTCCCCAACTGGCCACAGAGGAAGAGCAGCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPRAGGRPRPPPSTS*CWSPTGHRGRAALS Trigger: ACTCAGAGCTGCTCTTCCTCTGTGGCCAGTTGGGGACCAGCATCATGAAGTGGATGGTGGTGGTCTTGGTCTGCCTCCAGCTCTTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000425343.6 |
||
| CDS TCA 90 bp | CTGTGGTGGCCTCATCCACGGACAGAGCAGGGTAGGCCAGGCCCATaGTGCCATCAAACTGCGCATAGACGAAGTTGGTACCAGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LWWPHPRTEQGRPGP*CHQTAHRRSWYQAH Trigger: ATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000425343.6 |
||
| CDS CCA 90 bp | GGAAGAGGGGAGCCCACGTGTCGAGGCAGCAAGTCTAGGCGGCAGTaGCAAAGCCTACTCTGTTGTTGCCCAAGTCGTAGACGGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGEPTCRGSKSRRQ*QSLLCCCPSRRRNS Trigger: ACTATTCCGTCTACGACTTGGGCAACAACAGAGTAGGCTTTGCCACTGCCGCCTAGACTTGCTGCCTCGACACGTGGGCTCCCCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS TCA 90 bp | ACTGCTTCCTTTCTGGGTTGGTGGAAAGGAGGTGTACTGGATGGATaGAGGCACATTTCGCAGGGCAGCCCAGCTTCAGGAAGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TASFLGWWKGGVLDG*RHISQGSPASGRGG Trigger: CCCTCCCCTTCCTGAAGCTGGGCTGCCCTGCGAAATGTGCCTTCATCCATCCAGTACACCTCCTTTCCACCAACCCAGAAAGGAAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415707.1 |
||
| CDS TCA 90 bp | GGATGCTCTGGACATCCATGTAGGCCATGGGCTCGTAGGTCACGCTaGGGTCACCAAAGCGGTACTTCCAAGCAGGATCATACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCSGHPCRPWARRSR*GHQSGTSKQDHTCG Trigger: CCCACAAGTATGATCCTGCTTGGAAGTACCGCTTTGGTGACCTCAGCGTGACCTACGAGCCCATGGCCTACATGGATGTCCAGAGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356667.8 |
||
| CDS TCA 90 bp | CGGTGTCAAAAAGGACCAGGAAGTTCTGGGGTGGAGTCCCGATGCTaGTCTCACCAAAGTAGGCAGCATCCATGTAGGCCATGGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RCQKGPGSSGVESRC*SHQSRQHPCRPWAR Trigger: ACGAGCCCATGGCCTACATGGATGCTGCCTACTTTGGTGAGATCAGCATCGGGACTCCACCCCAGAACTTCCTGGTCCTTTTTGACACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373025.7 ENST00000425343.6 |
||
| CDS CCA 90 bp | ACGCTGAGGTCACCAAAGCGGTACTTCCAAGCAGGATCATACTTGTaGGTCCTCAGGAACTCCCCCAGCAAGCCCTTCTCCTTCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLRSPKRYFQAGSYL*VLRNSPSKPFSFMV Trigger: GACCATGAAGGAGAAGGGCTTGCTGGGGGAGTTCCTGAGGACCCACAAGTATGATCCTGCTTGGAAGTACCGCTTTGGTGACCTCAGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000415707.1 ENST00000425343.6 |
||
| CDS CCA 90 bp | GATGACTGCTTCCTTTCTGGGTTGGTGGAAAGGAGGTGTACTGGATaGATGAAGGCACATTTCGCAGGGCAGCCCAGCTTCAGGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DDCFLSGLVERRCTG*MKAHFAGQPSFRKG Trigger: CCCCTTCCTGAAGCTGGGCTGCCCTGCGAAATGTGCCTTCATCCATCCAGTACACCTCCTTTCCACCAACCCAGAAAGGAAGCAGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415707.1 |
||
| CDS CCA 90 bp | GGGGTAAGGATATTCCATGTTTGTTCCAGAGGCTTCTCTGGTAGCTaGAGTGTGGAGCTGGGTGGAGCTGCTCTGCTAGGGGTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVRIFHVCSRGFSGS*SVELGGAALLGVSS Trigger: ACTGCTGACCCCTAGCAGAGCAGCTCCACCCAGCTCCACACTCCAGCTACCAGAGAAGCCTCTGGAACAAACATGGAATATCCTTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425343.6 |
||
| CDS TCA 90 bp | CAAAGTAGGCAGCATCCATGTAGGCCATGGGCTCGTAGGTCACGCTaGGGTCACCAAAGCGGTACTTCCAAGCAGGATCATACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSRQHPCRPWARRSR*GHQSGTSKQDHTCG Trigger: CCCACAAGTATGATCCTGCTTGGAAGTACCGCTTTGGTGACCTCAGCGTGACCTACGAGCCCATGGCCTACATGGATGCTGCCTACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373025.7 ENST00000415707.1 ENST00000425343.6 |
||
| CDS CCA 90 bp | TCCCACGGTGCAGTAGCCGTTGTTACTGAGGATATAGGAGGAAGGTaGCAGAGGGAACTCCACACCATTGATGATGAAGGTCAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHGAVAVVTEDIGGR*QRELHTIDDEGQAG Trigger: CCCAGCTTGACCTTCATCATCAATGGTGTGGAGTTCCCTCTGCCACCTTCCTCCTATATCCTCAGTAACAACGGCTACTGCACCGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CAA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGAAGCCGAACTCCTGGTaGGGGACCTGGATGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRRLNPEWKDRYNALGGKPNSW*GTWMLW Trigger: CCAGAGCATCCAGGTCCCCAACCAGGAGTTCGGCTT...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CAA 90 bp | AGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTTCTTCAGGGGCACTTaGACCACTGCTGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKRRLNPEWKDRYNALGGFFRGT*TTAASK Trigger: CTTGGAGGCAGCAGTGGTCAAAGTGCCCCTGAAGAA...CCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CAA 90 bp | CAGAAAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGCAAGCAGGATCATACTaGTGGGTCCTCAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKKKAESRVERQIQCPRRQAGSY*WVLRNS Trigger: GGAGTTCCTGAGGACCCACAAGTATGATCCTGCTTG...CCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAGGCTGAATCCAGAGTGGAAAGACAGATACAATGCCCTAGGAGGGTGCGGGAACTCCACACCATaGATGATGAAGGTCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRRLNPEWKDRYNALGGCGNSTP*MMKVKL Trigger: CAGCTTGACCTTCATCATCAATGGTGTGGAGTTCCC...GCACCCTCCTAGGGCATTGTATCTGTCTTTCCACTCTGGATTCAGCCTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS TCA 90 bp | GGGAACTCCACACCATTGATGATGAAGGTCAAGCTGGGCAGATTCTaGATGCTGTTACAGTTCACGAGAAACTGTCCATACTCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNSTPLMMKVKLGRF*MLLQFTRNCPYSSS Trigger: GGAGGATGAGTATGGACAGTTTCTCGTGAACTGTAACAGCATTCAGAATCTGCCCAGCTTGACCTTCATCATCAATGGTGTGGAGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS CCA 72 bp | TCCACAGGGGCTGGCCGTTCTGGGAGGACAGGTAGGTaGGCTCGACTCCCACGGTGCAGTAGCCGTTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: STGAGRSGRTGR*ARLPRCSSRCY Trigger: GTAACAACGGCTACTGCACCGTGGGAGTCGAGCCCACCTACCTGTCCTCCCAGAACGGCCAGCCCCTGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS GCA 72 bp | TGGGCCCCTGTGGCCTGCAGAAGAGCACTCATGTACTaGTGGGGCACAGTGAGCAGAGAGGTGCCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WAPVACRRALMY*WGTVSREVPVS Trigger: GGACACAGGCACCTCTCTGCTCACTGTGCCCCAGCAGTACATGAGTGCTCTTCTGCAGGCCACAGGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||
| CDS CCA 72 bp | ATGCGTCCCTTAGACTGGGGCTTTCTGGCCAGGCCTTaGAATTCCCAGCGCCTCAGGCTCCCGAATGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: MRPLDWGFLARP*NSQRLRLPNDA Trigger: AGCATCATTCGGGAGCCTGAGGCGCTGGGAATTCCAAGGCCTGGCCAGAAAGCCCCAGTCTAAGGGACGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425343.6 |
||
| CDS TCA 72 bp | GCTGGAGGCAGACCAAGACCACCACCATCCACTTCATaGTGCTGGTCCCCAACTGGCCACAGAGGAAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGGRPRPPPSTS*CWSPTGHRGRA Trigger: TGCTCTTCCTCTGTGGCCAGTTGGGGACCAGCATCATGAAGTGGATGGTGGTGGTCTTGGTCTGCCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000425343.6 |
||
| CDS CAA 90 bp | GTCACGCTGAGGTCACCAAAGCGGTACTTCCAAGCAGGATCATACTaGTGGGTCCTCAGGAACTCCCCCAGCAAGCCCTTCTCCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: VTLRSPKRYFQAGSY*WVLRNSPSKPFSFM Trigger: CATGAAGGAGAAGGGCTTGCTGGGGGAGTTCCTGAGGACCCACAAGTATGATCCTGCTTGGAAGTACCGCTTTGGTGACCTCAGCGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000415707.1 ENST00000425343.6 |
||
| CDS TCA 72 bp | GGACATCCATGTAGGCCATGGGCTCGTAGGTCACGCTaGGGTCACCAAAGCGGTACTTCCAAGCAGGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GHPCRPWARRSR*GHQSGTSKQDH Trigger: ATGATCCTGCTTGGAAGTACCGCTTTGGTGACCTCAGCGTGACCTACGAGCCCATGGCCTACATGGATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356667.8 |
||
| CDS TCA 72 bp | CAGCATCCATGTAGGCCATGGGCTCGTAGGTCACGCTaGGGTCACCAAAGCGGTACTTCCAAGCAGGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: QHPCRPWARRSR*GHQSGTSKQDH Trigger: ATGATCCTGCTTGGAAGTACCGCTTTGGTGACCTCAGCGTGACCTACGAGCCCATGGCCTACATGGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373025.7 ENST00000415707.1 ENST00000425343.6 |
||
| CDS CCA 72 bp | TCACCAAAGCGGTACTTCCAAGCAGGATCATACTTGTaGGTCCTCAGGAACTCCCCCAGCAAGCCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPKRYFQAGSYL*VLRNSPSKPFS Trigger: GGAGAAGGGCTTGCTGGGGGAGTTCCTGAGGACCCACAAGTATGATCCTGCTTGGAAGTACCGCTTTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000415707.1 ENST00000425343.6 |
||
| CDS CAA 72 bp | AGGTCACCAAAGCGGTACTTCCAAGCAGGATCATACTaGTGGGTCCTCAGGAACTCCCCCAGCAAGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSPKRYFQAGSY*WVLRNSPSKPF Trigger: GAAGGGCTTGCTGGGGGAGTTCCTGAGGACCCACAAGTATGATCCTGCTTGGAAGTACCGCTTTGGTGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000356667.8 ENST00000373025.7 ENST00000415707.1 ENST00000425343.6 |
||
| CDS TCA 72 bp | AAAGGACCAGGAAGTTCTGGGGTGGAGTCCCGATGCTaGTCTCACCAAAGTAGGCAGCATCCATGTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KGPGSSGVESRC*SHQSRQHPCRP Trigger: TGGCCTACATGGATGCTGCCTACTTTGGTGAGATCAGCATCGGGACTCCACCCCAGAACTTCCTGGTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373025.7 ENST00000425343.6 |
||
| CDS TCA 72 bp | TTTCTGGGTTGGTGGAAAGGAGGTGTACTGGATGGATaGAGGCACATTTCGCAGGGCAGCCCAGCTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FLGWWKGGVLDG*RHISQGSPASG Trigger: TCCTGAAGCTGGGCTGCCCTGCGAAATGTGCCTTCATCCATCCAGTACACCTCCTTTCCACCAACCCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415707.1 |
||
| CDS CCA 72 bp | TTCCTTTCTGGGTTGGTGGAAAGGAGGTGTACTGGATaGATGAAGGCACATTTCGCAGGGCAGCCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLSGLVERRCTG*MKAHFAGQPSF Trigger: GAAGCTGGGCTGCCCTGCGAAATGTGCCTTCATCCATCCAGTACACCTCCTTTCCACCAACCCAGAAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415707.1 |
||
| CDS CAA 90 bp | GCCCAGCTTGTTACTTTTCTGCTGAGATTGGAGACAGGTAGGGTCTaGGTGAAGGGGGTAAGGATATTCCATGTTTGTTCCAGAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQLVTFLLRLETGRV*VKGVRIFHVCSRGF Trigger: GAAGCCTCTGGAACAAACATGGAATATCCTTACCCCCTTCACCAAGACCCTACCTGTCTCCAATCTCAGCAGAAAAGTAACAAGCTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425343.6 |
||
| CDS CAA 72 bp | GTTACTTTTCTGCTGAGATTGGAGACAGGTAGGGTCTaGGTGAAGGGGGTAAGGATATTCCATGTTTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTFLLRLETGRV*VKGVRIFHVCS Trigger: GGAACAAACATGGAATATCCTTACCCCCTTCACCAAGACCCTACCTGTCTCCAATCTCAGCAGAAAAGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425343.6 |
||
| CDS TCA 72 bp | ACACCATTGATGATGAAGGTCAAGCTGGGCAGATTCTaGATGCTGTTACAGTTCACGAGAAACTGTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: TPLMMKVKLGRF*MLLQFTRNCPY Trigger: GTATGGACAGTTTCTCGTGAACTGTAACAGCATTCAGAATCTGCCCAGCTTGACCTTCATCATCAATGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373025.7 |
||