RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGBD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000177614

Ensembl transcript IDs: ENST00000391860.7, ENST00000525115.1, ENST00000530424.1

Found 665 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGTGCCCAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTaGCGGGCACGCAGCCTCTCCAGTCCTGCCGTCAGCAACCGCCTC +
Preference number: 1 (lower is better)
Translates to: KVPRSAWGTHEPRCQ*RARSLSSPAVSNRL
Trigger: GAGGCGGTTGCTGACGGCAGGACTGGAGAGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTGGGCACTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CATCTGCGACAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTaGAGAGCAACCACGTCTGTTCGGAAGCCAGCGGCCCTTCCCGGC +
Preference number: 1 (lower is better)
Translates to: HLRQSLGPAGSPCAS*RATTSVRKPAALPG
Trigger: GCCGGGAAGGGCCGCTGGCTTCCGAACAGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTGTCGCAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp ACCCGGCGGTCCCCATTCAGCCCCGGGAGCCACTCGGATCAAGTCTaGCTGTATCCCGAGGGCGACCAGGACAGCCCTGTGAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: TRRSPFSPGSHSDQV*LYPEGDQDSPVSSS
Trigger: ACTGCTGCTCACAGGGCTGTCCTGGTCGCCCTCGGGATACAGCCAGACTTGATCCGAGTGGCTCCCGGGGCTGAATGGGGACCGCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp TCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTaGTGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTGCCCC +
Preference number: 1 (lower is better)
Translates to: SLPGSKPHTRPCPGL*WASWNGRLSSSSCP
Trigger: GGGGCAAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
3UTR CCA 90 bp GCAGCAATGGTGACTGCCACCTCCCCCACACGGGGTCTCGGCCTCTaGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTGCCC +
Preference number: 1 (lower is better)
Translates to: AAMVTATSPTRGLGL*LEPSFGGESACSVP
Trigger: GGGCACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGGTGGCAGTCACCATTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GGCACCGAGGCTTCCCTGGAGACGCATAAACCTGGGTTGGGAAAGTaGCCAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCC +
Preference number: 1 (lower is better)
Translates to: GTEASLETHKPGLGK*PDLPGGHTSLAASA
Trigger: GGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTGGGCACTTTCCCAACCCAGGTTTATGCGTCTCCAGGGAAGCCTCGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp ACTGGGGTGCGCACTGGGCACCCCAGGGAGGGAGGGACACAGAGATaGCTAAATGGCAGCGAGCTGCGTGGCCAGAGGGCATGCTTACTC +
Preference number: 1 (lower is better)
Translates to: TGVRTGHPREGGTQR*LNGSELRGQRACLL
Trigger: GAGTAAGCATGCCCTCTGGCCACGCAGCTCGCTGCCATTTAGCCATCTCTGTGTCCCTCCCTCCCTGGGGTGCCCAGTGCGCACCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GGCTCTGGGGCAGAAGGGCCACCCCAAGCCGCCTGGAAGTGTGCCTaGCTGTTAGCCACCGCTGTCATACCTTTCAAACACAGCACCTGC +
Preference number: 1 (lower is better)
Translates to: GSGAEGPPQAAWKCA*LLATAVIPFKHSTC
Trigger: GCAGGTGCTGTGTTTGAAAGGTATGACAGCGGTGGCTAACAGGCAGGCACACTTCCAGGCGGCTTGGGGTGGCCCTTCTGCCCCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTaGTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTCAAGGGC +
Preference number: 1 (lower is better)
Translates to: GLGLWLEPSFGGESA*SVPPTCFSHGTLKG
Trigger: GCCCTTGAGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp ACCACTCTGGCACCGAGGCTTCCCTGGAGACGCATAAACCTGGGTTaGGAAAGTGCCCAGATCTGCCTGGGGGACACACGAGCCTCGCTG +
Preference number: 1 (lower is better)
Translates to: TTLAPRLPWRRINLG*ESAQICLGDTRASL
Trigger: CAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTGGGCACTTTCCCAACCCAGGTTTATGCGTCTCCAGGGAAGCCTCGGTGCCAGAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp TTAGGACGCGGCCTCCTGCGTCAGGCAAACCCGGGTCTGCTTACCTaGGCGAACCATTGCACCACTCCATCTGGGCGTGGTGACAGTCCA +
Preference number: 1 (lower is better)
Translates to: LGRGLLRQANPGLLT*ANHCTTPSGRGDSP
Trigger: TGGACTGTCACCACGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGTAAGCAGACCCGGGTTTGCCTGACGCAGGAGGCCGCGTCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp GCTAAGCCAGGTGCATGTGATGCCTGCCAAGCAAGGTGGAGGGTCTaGGGGTTGCTGAGTCCAGCAGCAATGGTGACTGCCACCTCCCCC +
Preference number: 1 (lower is better)
Translates to: AKPGACDACQARWRV*GLLSPAAMVTATSP
Trigger: GGGGGAGGTGGCAGTCACCATTGCTGCTGGACTCAGCAACCCCCAGACCCTCCACCTTGCTTGGCAGGCATCACATGCACCTGGCTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp CGGATCAAGTCTGGCTGTATCCCGAGGGCGACCAGGACAGCCCTGTaGGCAGCAGTTCCCCTCCTGGAACACTGCTTCACCAGCCCATCA +
Preference number: 1 (lower is better)
Translates to: RIKSGCIPRATRTAL*AAVPLLEHCFTSPS
Trigger: TGATGGGCTGGTGAAGCAGTGTTCCAGGAGGGGAACTGCTGCTCACAGGGCTGTCCTGGTCGCCCTCGGGATACAGCCAGACTTGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GAGAGCAACCACGTCTGTTCGGAAGCCAGCGGCCCTTCCCGGCCCTaGCACAGGCCAGAACACAGAACTGTGATCATGCAAAGAGCCGTG +
Preference number: 1 (lower is better)
Translates to: ESNHVCSEASGPSRP*HRPEHRTVIMQRAV
Trigger: CACGGCTCTTTGCATGATCACAGTTCTGTGTTCTGGCCTGTGGCAGGGCCGGGAAGGGCCGCTGGCTTCCGAACAGACGTGGTTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp CTCCTGCGTCAGGCAAACCCGGGTCTGCTTACCTGGGCGAACCATTaGACCACTCCATCTGGGCGTGGTGACAGTCCATGCCTAACCCAC +
Preference number: 1 (lower is better)
Translates to: LLRQANPGLLTWANH*TTPSGRGDSPCLTH
Trigger: GTGGGTTAGGCATGGACTGTCACCACGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGTAAGCAGACCCGGGTTTGCCTGACGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GTAAGGCTCTGGGGCAGAAGGGCCACCCCAAGCCGCCTGGAAGTGTaGCTGCCTGTTAGCCACCGCTGTCATACCTTTCAAACACAGCAC +
Preference number: 1 (lower is better)
Translates to: VRLWGRRATPSRLEV*LPVSHRCHTFQTQH
Trigger: GTGCTGTGTTTGAAAGGTATGACAGCGGTGGCTAACAGGCAGGCACACTTCCAGGCGGCTTGGGGTGGCCCTTCTGCCCCAGAGCCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp TCAGGGATAAAATCCCCCGTCCTCGTGATGAATCAGGACAGCCAGTaGCCACAGCAGTTAGGACGCGGCCTCCTGCGTCAGGCAAACCCG +
Preference number: 1 (lower is better)
Translates to: SGIKSPVLVMNQDSQ*PQQLGRGLLRQANP
Trigger: CGGGTTTGCCTGACGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACGAGGACGGGGGATTTTATCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CTTGGCAAGCCCTCGCTTAAGGAAGAGGGACCAGAACCACAAAGCTaGCATGTGGGTGAAGACGGCGCCTCTGGCCTAGATCCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: LGKPSLKEEGPEPQS*HVGEDGASGLDPRA
Trigger: TGCCCTGGGATCTAGGCCAGAGGCGCCGTCTTCACCCACATGCCAGCTTTGTGGTTCTGGTCCCTCTTCCTTAAGCGAGGGCTTGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp GGCATGACCTCTCGGATAGCTGGGAACACCGTCCCTGCTCATGTTTaGGGCGTGCTCCCCAGATACACACACGCATACCTGGCTCTCAGG +
Preference number: 1 (lower is better)
Translates to: GMTSRIAGNTVPAHV*GVLPRYTHAYLALR
Trigger: CCTGAGAGCCAGGTATGCGTGTGTGTATCTGGGGAGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCAGCTATCCGAGAGGTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp CTGGATCTGAGTGGAATGGGCTCTCACTTGCCATGTGTGCAGTGGTaGTTGCCAGCCCCATATACTCAGCCAGGGCCATGCTGGCTCCCT +
Preference number: 1 (lower is better)
Translates to: LDLSGMGSHLPCVQW*LPAPYTQPGPCWLP
Trigger: AGGGAGCCAGCATGGCCCTGGCTGAGTATATGGGGCTGGCAAGCACCACTGCACACATGGCAAGTGAGAGCCCATTCCACTCAGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp TGGCTGGATCTGAGTGGAATGGGCTCTCACTTGCCATGTGTGCAGTaGTGCTTGCCAGCCCCATATACTCAGCCAGGGCCATGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: WLDLSGMGSHLPCVQ*CLPAPYTQPGPCWL
Trigger: GAGCCAGCATGGCCCTGGCTGAGTATATGGGGCTGGCAAGCACCACTGCACACATGGCAAGTGAGAGCCCATTCCACTCAGATCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp GCAGAGACATCCCTCAGGGGATCGGCTTGGCTTAGTGGCTGGATCTaGGTGGAATGGGCTCTCACTTGCCATGTGTGCAGTGGTGCTTGC +
Preference number: 1 (lower is better)
Translates to: AETSLRGSAWLSGWI*VEWALTCHVCSGAC
Trigger: GCAAGCACCACTGCACACATGGCAAGTGAGAGCCCATTCCACTCAGATCCAGCCACTAAGCCAAGCCGATCCCCTGAGGGATGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp CATAAAGTGCCCCTTCCACCTGAGGGAGCCAGGAGGCTTGACACGTaGGGGAAGCCGCACACACTCCTCCATCGTCTTCCTAGGTCTTTC +
Preference number: 1 (lower is better)
Translates to: HKVPLPPEGARRLDT*GKPHTLLHRLPRSF
Trigger: GAAAGACCTAGGAAGACGATGGAGGAGTGTGTGCGGCTTCCCTCACGTGTCAAGCCTCCTGGCTCCCTCAGGTGGAAGGGGCACTTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp CTCATTCTACCACGGGGGCCTTCCTTCACAGTCACCAGTCCACGCTaGCTCGCAAGCTCCACGGATGTCATGAGAGAATCTGCCCTTGAG +
Preference number: 1 (lower is better)
Translates to: LILPRGPSFTVTSPR*LASSTDVMRESALE
Trigger: CTCAAGGGCAGATTCTCTCATGACATCCGTGGAGCTTGCGAGGCAGCGTGGACTGGTGACTGTGAAGGAAGGCCCCCGTGGTAGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp AGACATCCCTCAGGGGATCGGCTTGGCTTAGTGGCTGGATCTGAGTaGAATGGGCTCTCACTTGCCATGTGTGCAGTGGTGCTTGCCAGC +
Preference number: 1 (lower is better)
Translates to: RHPSGDRLGLVAGSE*NGLSLAMCAVVLAS
Trigger: GCTGGCAAGCACCACTGCACACATGGCAAGTGAGAGCCCATTCCACTCAGATCCAGCCACTAAGCCAAGCCGATCCCCTGAGGGATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp ACGCTGCCTCGCAAGCTCCACGGATGTCATGAGAGAATCTGCCCTTaGGAACGTGGGTGTAAGTGCTCATCACACCGGCGGCACTGTTTC +
Preference number: 1 (lower is better)
Translates to: TLPRKLHGCHERICP*ERGCKCSSHRRHCF
Trigger: GAAACAGTGCCGCCGGTGTGATGAGCACTTACACCCACGTTCTCAAGGGCAGATTCTCTCATGACATCCGTGGAGCTTGCGAGGCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp AGGTGCTGGCATGAGGCAAATGCTGGAAAACCCTCCGGCCTCCCCTaGCACCTGAGCCATTGTAACCATGCAGGGCGTCTTTGCTTCCTT +
Preference number: 1 (lower is better)
Translates to: RCWHEANAGKPSGLP*HLSHCNHAGRLCFL
Trigger: AAGGAAGCAAAGACGCCCTGCATGGTTACAATGGCTCAGGTGTCAGGGGAGGCCGGAGGGTTTTCCAGCATTTGCCTCATGCCAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp CATCACAAAAGGGGGACCGATGGTTGTCAGCTCCCAGGGCAATGCTaGGGACTCAGCAAAGGAACCATACAGGGAGACGTGACCTGCTGG +
Preference number: 1 (lower is better)
Translates to: HHKRGTDGCQLPGQC*GLSKGTIQGDVTCW
Trigger: CCAGCAGGTCACGTCTCCCTGTATGGTTCCTTTGCTGAGTCCTCAGCATTGCCCTGGGAGCTGACAACCATCGGTCCCCCTTTTGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GCCTGCCTGTTAGCCACCGCTGTCATACCTTTCAAACACAGCACCTaGGAGGATGCAGGAGACAGATCTGGGAGGTACCACACCCAAGGT +
Preference number: 1 (lower is better)
Translates to: ACLLATAVIPFKHST*EDAGDRSGRYHTQG
Trigger: ACCTTGGGTGTGGTACCTCCCAGATCTGTCTCCTGCATCCTCGCAGGTGCTGTGTTTGAAAGGTATGACAGCGGTGGCTAACAGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATaGCTGGCCTGTAGCAGTTCAGAAGCAGCAGTGGCTGAGAACCAG +
Preference number: 1 (lower is better)
Translates to: GTDHVGVTRAQFLAQ*LACSSSEAAVAENQ
Trigger: CTGGTTCTCAGCCACTGCTGCTTCTGAACTGCTACAGGCCAGGCATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GTGCTCCCCAGATACACACACGCATACCTGGCTCTCAGGGCAAGTTaGAGGTTGGCAAGTCCTGGTCAAATGCAGTGTGACTGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: VLPRYTHAYLALRAS*RLASPGQMQCDCSL
Trigger: GAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGTGTATCTGGGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CTGCTCATGTTTGGGGCGTGCTCCCCAGATACACACACGCATACCTaGCTCTCAGGGCAAGTTGCAGGTTGGCAAGTCCTGGTCAAATGC +
Preference number: 1 (lower is better)
Translates to: LLMFGACSPDTHTHT*LSGQVAGWQVLVKC
Trigger: GCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGTGTATCTGGGGAGCACGCCCCAAACATGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp CGGCACTGTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATaGGGACAGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCA +
Preference number: 1 (lower is better)
Translates to: RHCFSREDMLFLECK*GQQPSSDQVHPVPP
Trigger: TGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAACAGTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp GGCATGAGGCAAATGCTGGAAAACCCTCCGGCCTCCCCTGACACCTaGGCCATTGTAACCATGCAGGGCGTCTTTGCTTCCTTCAAGTCT +
Preference number: 1 (lower is better)
Translates to: GMRQMLENPPASPDT*AIVTMQGVFASFKS
Trigger: AGACTTGAAGGAAGCAAAGACGCCCTGCATGGTTACAATGGCTCAGGTGTCAGGGGAGGCCGGAGGGTTTTCCAGCATTTGCCTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp AGTCTCCTCATTACGACCGTGTATACATGGGTATACACGGAAGGGTaGAGGTGCCCCACCCTCCCCGGAACACAGTTCACACAGAGCTGC +
Preference number: 1 (lower is better)
Translates to: SLLITTVYTWVYTEG*RCPTLPGTQFTQSC
Trigger: GCAGCTCTGTGTGAACTGTGTTCCGGGGAGGGTGGGGCACCTTCACCCTTCCGTGTATACCCATGTATACACGGTCGTAATGAGGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CATCACACCGGCGGCACTGTTTCTCGAGGGAGGACATGCTCTTCTTaGAATGCAAATGAGGACAGCAACCGTCCTCTGACCAGGTCCATC +
Preference number: 1 (lower is better)
Translates to: HHTGGTVSRGRTCSS*NANEDSNRPLTRSI
Trigger: GATGGACCTGGTCAGAGGACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCCGGTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp ACTGGGTTGAAGGGGGACTGGGTAATCCCAGAAATTCCTTGTTTCTaGTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAG +
Preference number: 1 (lower is better)
Translates to: TGLKGDWVIPEIPCF*SVGMVRSAHHSGTE
Trigger: CTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGACCAGAAACAAGGAATTTCTGGGATTACCCAGTCCCCCTTCAACCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CAGGGAGGGAGGGACACAGAGATGGCTAAATGGCAGCGAGCTGCGTaGCCAGAGGGCATGCTTACTCTCTGGTGCTATTTTATGGCAACA +
Preference number: 1 (lower is better)
Translates to: QGGRDTEMAKWQRAA*PEGMLTLWCYFMAT
Trigger: TGTTGCCATAAAATAGCACCAGAGAGTAAGCATGCCCTCTGGCCACGCAGCTCGCTGCCATTTAGCCATCTCTGTGTCCCTCCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CACGGCTCTCAGAGTGTCACTTTCCCATCACAAAAGGGGGACCGATaGTTGTCAGCTCCCAGGGCAATGCTGAGGACTCAGCAAAGGAAC +
Preference number: 1 (lower is better)
Translates to: HGSQSVTFPSQKGDR*LSAPRAMLRTQQRN
Trigger: GTTCCTTTGCTGAGTCCTCAGCATTGCCCTGGGAGCTGACAACCATCGGTCCCCCTTTTGTGATGGGAAAGTGACACTCTGAGAGCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp GCAGGTTGGCAAGTCCTGGTCAAATGCAGTGTGACTGCAGCCTCTTaGGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAG +
Preference number: 1 (lower is better)
Translates to: AGWQVLVKCSVTAAS*GGSDSCVCRDVLSQ
Trigger: CTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp TCTCAGGGCAAGTTGCAGGTTGGCAAGTCCTGGTCAAATGCAGTGTaGCTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGGG +
Preference number: 1 (lower is better)
Translates to: SQGKLQVGKSWSNAV*LQPLEEAQTLVFAG
Trigger: CCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GTAAGTGCTCATCACACCGGCGGCACTGTTTCTCGAGGGAGGACATaGTCTTCTTGGAATGCAAATGAGGACAGCAACCGTCCTCTGACC +
Preference number: 1 (lower is better)
Translates to: VSAHHTGGTVSRGRT*SSWNANEDSNRPLT
Trigger: GGTCAGAGGACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCCGGTGTGATGAGCACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GTTAGCCACCGCTGTCATACCTTTCAAACACAGCACCTGCGAGGATaGAGGAGACAGATCTGGGAGGTACCACACCCAAGGTCACCTTTC +
Preference number: 1 (lower is better)
Translates to: VSHRCHTFQTQHLRG*RRQIWEVPHPRSPF
Trigger: GAAAGGTGACCTTGGGTGTGGTACCTCCCAGATCTGTCTCCTGCATCCTCGCAGGTGCTGTGTTTGAAAGGTATGACAGCGGTGGCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GGACTGCTCCTCCCTCACCTGGTTTCTACGTGGACCCACCATTCTTaGCCTCCTGGACCCCTAAACTGGCCCATGTGTTTAGTTGTAGAA +
Preference number: 1 (lower is better)
Translates to: GLLLPHLVSTWTHHS*PPGPLNWPMCLVVE
Trigger: TTCTACAACTAAACACATGGGCCAGTTTAGGGGTCCAGGAGGGCAAGAATGGTGGGTCCACGTAGAAACCAGGTGAGGGAGGAGCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp CATACCTTTCAAACACAGCACCTGCGAGGATGCAGGAGACAGATCTaGGAGGTACCACACCCAAGGTCACCTTTCTCCCCCATCAGTGTC +
Preference number: 1 (lower is better)
Translates to: HTFQTQHLRGCRRQI*EVPHPRSPFSPISV
Trigger: GACACTGATGGGGGAGAAAGGTGACCTTGGGTGTGGTACCTCCCAGATCTGTCTCCTGCATCCTCGCAGGTGCTGTGTTTGAAAGGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp TCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCTaGGGGCTGTTGAACCCAGGGAGATACTGGAACCAGATGCACTTC +
Preference number: 1 (lower is better)
Translates to: SPGMASYSKANQEST*GLLNPGRYWNQMHF
Trigger: GAAGTGCATCTGGTTCCAGTATCTCCCTGGGTTCAACAGCCCTCAGGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp AGGGCAAGTTGCAGGTTGGCAAGTCCTGGTCAAATGCAGTGTGACTaGAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGT +
Preference number: 1 (lower is better)
Translates to: RASCRLASPGQMQCD*SLLRRLRLLCLQGC
Trigger: ACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp GAGAATTGGGCTGGGAACAAGGAACCCTCACATGGATCGTCAGGCTaGAGGAGTAGGTGGGCACCATACTTCCTTGGAGAAAACAGAAGC +
Preference number: 1 (lower is better)
Translates to: ENWAGNKEPSHGSSG*RSRWAPYFLGENRS
Trigger: GCTTCTGTTTTCTCCAAGGAAGTATGGTGCCCACCTACTCCTCCAGCCTGACGATCCATGTGAGGGTTCCTTGTTCCCAGCCCAATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp CCTGATAAGAACGGAAGGTATTTGGGCAGACAGCCAAGCCCGCATTaGCTGACACAGGGCCGTAACAGGAGAGATTTCTTCACAGACAGA +
Preference number: 1 (lower is better)
Translates to: PDKNGRYLGRQPSPH*LTQGRNRRDFFTDR
Trigger: TCTGTCTGTGAAGAAATCTCTCCTGTTACGGCCCTGTGTCAGTCAATGCGGGCTTGGCTGTCTGCCCAAATACCTTCCGTTCTTATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp AAGGCAAGGTCCAGGTCCCTGGAGGTTCTGTCAGTCCGTCCTACATaGTATTCTGTCCTTCTGGATGGAGAAGAGAAACTCTTCTCAGTC +
Preference number: 1 (lower is better)
Translates to: KARSRSLEVLSVRPT*YSVLLDGEEKLFSV
Trigger: GACTGAGAAGAGTTTCTCTTCTCCATCCAGAAGGACAGAATAGCATGTAGGACGGACTGACAGAACCTCCAGGGACCTGGACCTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp GCAGCCACCCACTGCCTGTCAGAACAGCACCTCTTCCTGCTCATCTaGAATGACACACGACACAAACTAGAAGAAAAGAGGGAAAACCAC +
Preference number: 1 (lower is better)
Translates to: AATHCLSEQHLFLLI*NDTRHKLEEKRENH
Trigger: GTGGTTTTCCCTCTTTTCTTCTAGTTTGTGTCGTGTGTCATTCCAGATGAGCAGGAAGAGGTGCTGTTCTGACAGGCAGTGGGTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp GGGAACAAGGAACCCTCACATGGATCGTCAGGCTGGAGGAGTAGGTaGGCACCATACTTCCTTGGAGAAAACAGAAGCAAGCATAAGACA +
Preference number: 1 (lower is better)
Translates to: GNKEPSHGSSGWRSR*APYFLGENRSKHKT
Trigger: TGTCTTATGCTTGCTTCTGTTTTCTCCAAGGAAGTATGGTGCCCACCTACTCCTCCAGCCTGACGATCCATGTGAGGGTTCCTTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp TCAATCCCATTAAAGGGCACAGCAAGGGTGTTTGGAAACACGATCTaGAATTTGGCCTGCAATCCGTGGCATCGATTCCAACCACAGGGC +
Preference number: 1 (lower is better)
Translates to: SIPLKGTARVFGNTI*NLACNPWHRFQPQG
Trigger: GCCCTGTGGTTGGAATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTGCCCTTTAATGGGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp TGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCTGAGGGCTGTTaGACCCAGGGAGATACTGGAACCAGATGCACTTCAACTAGAGTC +
Preference number: 1 (lower is better)
Translates to: WPATPKPIKNQPEGC*TQGDTGTRCTSTRV
Trigger: GACTCTAGTTGAAGTGCATCTGGTTCCAGTATCTCCCTGGGTTCAACAGCCCTCAGGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp ATAAGAACGGAAGGTATTTGGGCAGACAGCCAAGCCCGCATTGACTaGCACAGGGCCGTAACAGGAGAGATTTCTTCACAGACAGAACTG +
Preference number: 1 (lower is better)
Translates to: IRTEGIWADSQARID*HRAVTGEISSQTEL
Trigger: CAGTTCTGTCTGTGAAGAAATCTCTCCTGTTACGGCCCTGTGTCAGTCAATGCGGGCTTGGCTGTCTGCCCAAATACCTTCCGTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp AACCATACAGGGAGACGTGACCTGCTGGAACAGAAATGCTCCATGTaGATTAACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGAC +
Preference number: 1 (lower is better)
Translates to: NHTGRRDLLEQKCSM*INCHSLVQRGLGED
Trigger: GTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTTAATGCACATGGAGCATTTCTGTTCCAGCAGGTCACGTCTCCCTGTATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp TCTGTCATAAGACCACTTACGATGCTCTTTCCTCATCCCCAGGGATaGCCAGCTACTCCAAAGCCAATCAAGAATCAACCTGAGGGCTGT +
Preference number: 1 (lower is better)
Translates to: SVIRPLTMLFPHPQG*PATPKPIKNQPEGC
Trigger: ACAGCCCTCAGGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAGAGCATCGTAAGTGGTCTTATGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp TTTCCCTGGCCACTACCTTGTGAACTTCTGGGGACTTCTTTCGTTTaGAACTCCCACTACACAAGGCTAAGGCTTTCCACAGCCAAAGCT +
Preference number: 1 (lower is better)
Translates to: FPWPLPCELLGTSFV*NSHYTRLRLSTAKA
Trigger: AGCTTTGGCTGTGGAAAGCCTTAGCCTTGTGTAGTGGGAGTTCCAAACGAAAGAAGTCCCCAGAAGTTCACAAGGTAGTGGCCAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp ACCACGACTCTTGCCAAAATTTGGCTGTTTCTTAGTGGAGAAAGGTaGGACATGAGAATTGGGCTGGGAACAAGGAACCCTCACATGGAT +
Preference number: 1 (lower is better)
Translates to: TTTLAKIWLFLSGER*DMRIGLGTRNPHMD
Trigger: ATCCATGTGAGGGTTCCTTGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAATTTTGGCAAGAGTCGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp AGGTCTCATAAACTCCGTGAAGCTCAGTGCAGGTTCAATTCCCTGTaGGTTGCAGGGAAATGCAGATTCTCTTTGGAGAAGCTTGGAAGT +
Preference number: 1 (lower is better)
Translates to: RSHKLREAQCRFNSL*VAGKCRFSLEKLGS
Trigger: ACTTCCAAGCTTCTCCAAAGAGAATCTGCATTTCCCTGCAACTCACAGGGAATTGAACCTGCACTGAGCTTCACGGAGTTTATGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp CTGAACACCGTACGCAATTGTTCTGGGCCCATCTTTCCAATCTATTaGAATAATAGGGACTGCATCCCCTGCTTCCATCCCCTGTTCATT +
Preference number: 1 (lower is better)
Translates to: LNTVRNCSGPIFPIY*NNRDCIPCFHPLFI
Trigger: AATGAACAGGGGATGGAAGCAGGGGATGCAGTCCCTATTATTTCAATAGATTGGAAAGATGGGCCCAGAACAATTGCGTACGGTGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp AACAGAGTGTTACAATGTTACAATTATTCTCTCATGACTGGGGAATaGAGCCACCCACTGCCTGTCAGAACAGCACCTCTTCCTGCTCAT +
Preference number: 1 (lower is better)
Translates to: NRVLQCYNYSLMTGE*SHPLPVRTAPLPAH
Trigger: ATGAGCAGGAAGAGGTGCTGTTCTGACAGGCAGTGGGTGGCTGCATTCCCCAGTCATGAGAGAATAATTGTAACATTGTAACACTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp GCCATTTTAGAAACAGAGTGTTACAATGTTACAATTATTCTCTCATaGCTGGGGAATGCAGCCACCCACTGCCTGTCAGAACAGCACCTC +
Preference number: 1 (lower is better)
Translates to: AILETECYNVTIILS*LGNAATHCLSEQHL
Trigger: GAGGTGCTGTTCTGACAGGCAGTGGGTGGCTGCATTCCCCAGTCATGAGAGAATAATTGTAACATTGTAACACTCTGTTTCTAAAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp GGTAAAAGTGCTTTCAATCCCATTAAAGGGCACAGCAAGGGTGTTTaGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATT +
Preference number: 1 (lower is better)
Translates to: GKSAFNPIKGHSKGV*KHDLKFGLQSVASI
Trigger: AATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTGCCCTTTAATGGGATTGAAAGCACTTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp AAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCAATTTACACTaGACACCGTACGCAATTGTTCTGGGCCCATCTTTCCAATCTATT +
Preference number: 1 (lower is better)
Translates to: KIASTILQLQIFNLH*TPYAIVLGPSFQSI
Trigger: AATAGATTGGAAAGATGGGCCCAGAACAATTGCGTACGGTGTTCAGTGTAAATTGAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 90 bp GCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTaGCATTTTAGAAACAGAGTGTTACAATGTTACAATTATTCTCTC +
Preference number: 1 (lower is better)
Translates to: AQQLPFPIMYQTTGG*HFRNRVLQCYNYSL
Trigger: GAGAGAATAATTGTAACATTGTAACACTCTGTTTCTAAAATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 90 bp ATTTGTAAAAATTTATTGCCTTGGCGTAAAGTGACAATCATGCCTTaGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCAC +
Preference number: 1 (lower is better)
Translates to: ICKNLLPWRKVTIMP*RKVKIFTEGYALCH
Trigger: GTGACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGTCACTTTACGCCAAGGCAATAAATTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 90 bp AAGAAGAAACAATGTAATGTAGCAGTGGAAACAAAATTCTCACAATaGATAGCAGTCTTTCCAGCTTCTTTGACACGGATTTCCTCATCA +
Preference number: 1 (lower is better)
Translates to: KKKQCNVAVETKFSQ*IAVFPASLTRISSS
Trigger: TGATGAGGAAATCCGTGTCAAAGAAGCTGGAAAGACTGCTATTCATTGTGAGAATTTTGTTTCCACTGCTACATTACATTGTTTCTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTCCAGCCCTGTTGTTCTaGGGGGCCACTCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QICLGDTRASLPVPGTQPPALLF*GATLSR
Trigger: CCTGCTCAGAGTGGCCCCTCAGAACAACAGGGCTGG...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAACTCTTGCCCCTCCCTTaGCCGAGTCCTGCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQLLPLP*PSPAPP
Trigger: TGGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAG...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
3UTR-3UTR GCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGCCCGCGGGCTCCCCATaGGCCTCGTGGAGAGCAACC +
Preference number: 2 (lower is better)
Translates to: RDESGQPVPTAVRTRPPAPAGSP*ASWRAT
Trigger: GGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGG...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CCTCCCCCACACGGGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTCTCCAGTCCTaGCGTCAGCAACCGCCTCCG +
Preference number: 2 (lower is better)
Translates to: PPPHGVSASGWSLLSAENQPLQS*RQQPPP
Trigger: CGGAGGCGGTTGCTGACGGCAGGACTGGAGAGGCTG...ATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTGAGCCTCGCTGCCAGTaGCGGGCACGCAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCEPRCQ*RARSLS
Trigger: GGAGAGGCTGCGTGCCCGGCACTGGCAGCGAGGCTC...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp CCAGGTGCATGTGATGCCTGCCAAGCAAGGTGGAGGGTCTGGGGGTaGCTGAGTCCAGCAGCAATGGTGACTGCCACCTCCCCCACACGG +
Preference number: 2 (lower is better)
Translates to: PGACDACQARWRVWG*LSPAAMVTATSPTR
Trigger: CCGTGTGGGGGAGGTGGCAGTCACCATTGCTGCTGGACTCAGCAACCCCCAGACCCTCCACCTTGCTTGGCAGGCATCACATGCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAACTCTCCTCCTCCTCTTaGCCCTCCCTTGACCGAGTC +
Preference number: 2 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQLSSSS*PSLDRV
Trigger: GACTCGGTCAAGGGAGGGGCAAGAGGAGGAGGAGAG...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
3UTR-3UTR CCA 90 bp CCTCCCCCACACGGGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCCTCATCCCCAGGGATaGCCAGCTACTCCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: PPPHGVSASGWSLLSAENPHPQG*PATPKP
Trigger: TGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGG...ATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGCCTGGGTTGGGAAAGTaGCCAGATCTGCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: RDESGQPVPTAVRTRPPAPGLGK*PDLPGG
Trigger: TCCCCCAGGCAGATCTGGGCACTTTCCCAACCCAGG...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTGCTCAGGGTCTGGTGTaGCCAAGGGCTTGCCCTGTC +
Preference number: 2 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPAQGLV*PRACPV
Trigger: GACAGGGCAAGCCCTTGGCCACACCAGACCCTGAGC...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp CCTCCCCCACACGGGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATAGAACGGAAGGTATTTaGGCAGACAGCCAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: PPPHGVSASGWSLLSAENRTEGI*ADSQAR
Trigger: GCGGGCTTGGCTGTCTGCCCAAATACCTTCCGTTCT...ATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp TGTAAGTGCTCATCACACCGGCGGCACTGTTTCTCGAGGGAGGACATGCTCTTCCTCTTGCCCCTCCCTTaGCCGAGTCCTGCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: CKCSSHRRHCFSREDMLFLLPLP*PSPAPP
Trigger: TGGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAG...GAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCCGGTGTGATGAGCACTTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGACACACGAGCCTCGCTaGCAGTGCCGGGCACGCAGC +
Preference number: 2 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMTHEPR*QCRARS
Trigger: GCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGT...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGGCTGGAGAACTGGGGTaGGCACTGGGCACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMAGELG*ALGTPG
Trigger: CCCTGGGGTGCCCAGTGCGCACCCCAGTTCTCCAGC...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTCCGGGTCTGCTTACCTaGGCGAACCATTGCACCACT +
Preference number: 2 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCPGLLT*ANHCTT
Trigger: AGTGGTGCAATGGTTCGCCCAGGTAAGCAGACCCGG...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp GGGCATGACCTCTCGGATAGCTGGGAACACCGTCCCTGCTCATGTTaGGGGCGTGCTCCCCAGATACACACACGCATACCTGGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: GHDLSDSWEHRPCSC*GRAPQIHTRIPGSQ
Trigger: CTGAGAGCCAGGTATGCGTGTGTGTATCTGGGGAGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCAGCTATCCGAGAGGTCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGGCAAAGAGCCGTGACTaGGGCCGGGGTCAGCGTCGG +
Preference number: 2 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGAKSRD*GRGQRR
Trigger: CCGACGCTGACCCCGGCCTCAGTCACGGCTCTTTGC...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTGGAGAGCAACCACGTCTAGACCGGTTCAAAGGTaGTGGCATGAGGCAAATGCT +
Preference number: 2 (lower is better)
Translates to: QSLGPAGSPCASWRATTSRPVQR*WHEANA
Trigger: AGCATTTGCCTCATGCCAGCACCTTTGAACCGGTCT...AGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp TCCTTGGCCATAAAGTGCCCCTTCCACCTGAGGGAGCCAGGAGGCTaGACACGTGAGGGAAGCCGCACACACTCCTCCATCGTCTTCCTA +
Preference number: 2 (lower is better)
Translates to: SLAIKCPFHLREPGG*TREGSRTHSSIVFL
Trigger: TAGGAAGACGATGGAGGAGTGTGTGCGGCTTCCCTCACGTGTCAAGCCTCCTGGCTCCCTCAGGTGGAAGGGGCACTTTATGGCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGCCCTCCGGCCTCCCCTaGCACCTGAGCCATTGTAAC +
Preference number: 2 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGPSGLP*HLSHCN
Trigger: GTTACAATGGCTCAGGTGTCAGGGGAGGCCGGAGGG...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGGGGGATGGTCAGATCTaGCCACCACTCTGGCACCGA +
Preference number: 2 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMGDGQI*PPLWHR
Trigger: TCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCC...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTAGAATGTGTGAGGCTTaGGTAGTTGCAAGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPRMCEA*VVARPH
Trigger: ATGGGGCCTTGCAACTACGCAAGCCTCACACATTCT...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGAGCAGCAATGGTGACTaGCACCTCCCCCACACGGGG +
Preference number: 2 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQSSNGD*HLPHTG
Trigger: CCCCGTGTGGGGGAGGTGGCAGTCACCATTGCTGCT...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp CCCAGATACACACACGCATACCTGGCTCTCAGGGCAAGTTGCAGGTaGGCAAGTCCTGGTCAAATGCAGTGTGACTGCAGCCTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: PRYTHAYLALRASCR*ASPGQMQCDCSLLR
Trigger: CCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGTGTATCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCACAGCAACCGTCCTCTaGCCAGGTCCATCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: LSSSPGMASYSKANQESTTATVL*PGPSCP
Trigger: GGGACAGGATGGACCTGGTCAGAGGACGGTTGCTGT...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATGGGAGCCAGGAGGCTTaGCACGTGAGGGAAGCCGCA +
Preference number: 2 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNGSQEA*HVREAA
Trigger: TGCGGCTTCCCTCACGTGTCAAGCCTCCTGGCTCCC...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTATCTCTCTTAGAGCGTaGTCCAGCTCATTCTACCAC +
Preference number: 2 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPISLRA*SSSFYH
Trigger: GTGGTAGAATGAGCTGGAGCACGCTCTAAGAGAGAT...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp GGCTCTCAGAGTGTCACTTTCCCATCACAAAAGGGGGACCGATGGTaGTCAGCTCCCAGGGCAATGCTGAGGACTCAGCAAAGGAACCAT +
Preference number: 2 (lower is better)
Translates to: GSQSVTFPSQKGDRW*SAPRAMLRTQQRNH
Trigger: ATGGTTCCTTTGCTGAGTCCTCAGCATTGCCCTGGGAGCTGACAACCATCGGTCCCCCTTTTGTGATGGGAAAGTGACACTCTGAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp ATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTaGCAGGGATGTGCTAAGCCAGGTGCATGTGATGCCTGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: MQCDCSLLRRLRLLC*QGCAKPGACDACQA
Trigger: TGCTTGGCAGGCATCACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp GGTCAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTaGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTGATGCCTGC +
Preference number: 2 (lower is better)
Translates to: GQMQCDCSLLRRLRL*CLQGCAKPGACDAC
Trigger: GCAGGCATCACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGTGTGGGGAAAGACAATaGAAGTCGAATATGGAACCT +
Preference number: 2 (lower is better)
Translates to: RDESGQPVPTAVRTRPPACGERQ*KSNMEP
Trigger: AGGTTCCATATTCGACTTTCATTGTCTTTCCCCACA...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCTTTCCCTCTCTCCCCTaGCCACCAGCTAAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LSSSPGMASYSKANQESTFPSLP*PPAKQR
Trigger: CCTCTGCTTAGCTGGTGGGCAGGGGAGAGAGGGAAA...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATGTGGGGCCCGGAGCATaGGGACAGCAACACTCGCAA +
Preference number: 2 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNVGPGA*GQQHSQ
Trigger: TTGCGAGTGTTGCTGTCCGCATGCTCCGGGCCCCAC...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGCTAGGAGAATGTGCCTaGGCTGCTGGAGAACTGGGG +
Preference number: 2 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQLGECA*AAGELG
Trigger: CCCCAGTTCTCCAGCAGCCCAGGCACATTCTCCTAG...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp TGCAGGTTGGCAAGTCCTGGTCAAATGCAGTGTGACTGCAGCCTCTaGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: CRLASPGQMQCDCSL*RRLRLLCLQGCAKP
Trigger: TGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAAGCCGCCTGGAAGTGTaGCTGCCTGTTAGCCACCGC +
Preference number: 2 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTSRLEV*LPVSHR
Trigger: GCGGTGGCTAACAGGCAGGCACACTTCCAGGCGGCT...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp TTGGAACTCCCACTACACAAGGCTAAGGCTTTCCACAGCCAAAGCTaGGCAAGCCCTCGCTTAAGGAAGAGGGACCAGAACCACAAAGCT +
Preference number: 2 (lower is better)
Translates to: LELPLHKAKAFHSQS*ASPRLRKRDQNHKA
Trigger: AGCTTTGTGGTTCTGGTCCCTCTTCCTTAAGCGAGGGCTTGCCAAGCTTTGGCTGTGGAAAGCCTTAGCCTTGTGTAGTGGGAGTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATCTCACTTGCCATGTGTaGAGTGGTGCTTGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNLTCHV*SGACQP
Trigger: GGGCTGGCAAGCACCACTGCACACATGGCAAGTGAG...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATAATCAGGACAGCCAGTaGCCACAGCAGTTAGGACGC +
Preference number: 2 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNNQDSQ*PQQLGR
Trigger: GCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATT...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGTTGGCCTGCAATCCGTaGCATCGATTCCAACCACAG +
Preference number: 2 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKLACNP*HRFQPQ
Trigger: CTGTGGTTGGAATCGATGCCACGGATTGCAGGCCAA...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGTTGCCATGTGTGCAGTaGTGCTTGCCAGCCCCATAT +
Preference number: 2 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKLPCVQ*CLPAPY
Trigger: ATATGGGGCTGGCAAGCACCACTGCACACATGGCAA...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp GGATTCAGAACCTTCCAGGCTCTGTCCTGGGGACCTGCAATCTTCTaGCTTCTTGCACGCAGCAGAGTTAACTCAATTTTGGTGACCAAG +
Preference number: 2 (lower is better)
Translates to: GFRTFQALSWGPAIF*LLARSRVNSILVTK
Trigger: CTTGGTCACCAAAATTGAGTTAACTCTGCTGCGTGCAAGAAGCAAGAAGATTGCAGGTCCCCAGGACAGAGCCTGGAAGGTTCTGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp ACTTTGAATCACATCTCTAAGGCAAGGTCCAGGTCCCTGGAGGTTCTGTCAGTCAACACTCGCAATAACTaGGTGAGGACGAGGCCCATA +
Preference number: 2 (lower is better)
Translates to: TLNHISKARSRSLEVLSVNTRNN*VRTRPI
Trigger: TATGGGCCTCGTCCTCACTCAGTTATTGCGAGTGTT...GACTGACAGAACCTCCAGGGACCTGGACCTTGCCTTAGAGATGTGATTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGCCTGCTCATCTGGAATaGCACACGACACAAACTAGA +
Preference number: 2 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQPAHLE*HTTQTR
Trigger: TCTAGTTTGTGTCGTGTGTCATTCCAGATGAGCAGG...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTAGTTGCAAGGCCCCATaGCCCTCCCGGGTTTGCCCT +
Preference number: 2 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCSCKAP*PSRVCP
Trigger: AGGGCAAACCCGGGAGGGCCATGGGGCCTTGCAACT...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACACAATTATTCTCTCATaGCTGGGGAATGCAGCCACC +
Preference number: 2 (lower is better)
Translates to: TQADVLPALSVFISKYMHTIILS*LGNAAT
Trigger: GGTGGCTGCATTCCCCAGTCATGAGAGAATAATTGT...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR TCA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGAGGTTCAATTCCCTGTaGGTTGCAGGGAAATGCAGA +
Preference number: 2 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKRFNSL*VAGKCR
Trigger: TCTGCATTTCCCTGCAACTCACAGGGAATTGAACCT...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCTCTCCTCCTCCTCTTaGCCCTCCCTTGACCGAGTC +
Preference number: 2 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCLSSSS*PSLDRV
Trigger: GACTCGGTCAAGGGAGGGGCAAGAGGAGGAGGAGAG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGTCTCGAGGGAGGACATaGTCTTCTTGGAATGCAAAT +
Preference number: 2 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQSRGRT*SSWNAN
Trigger: ATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGA...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCAGTTCACACAGAGCTaGCACCAGCGCCAGCACCAC +
Preference number: 2 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCQFTQS*HQRQHH
Trigger: GTGGTGCTGGCGCTGGTGGCAGCTCTGTGTGAACTG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp CTGAGCCATTGTAACCATGCAGGGCGTCTTTGCTTCCTTCAAGTCTaGAACTTGAACCACGTCCCAGATTGCTGTAGATCTTTAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LSHCNHAGRLCFLQV*NLNHVPDCCRSLGS
Trigger: GCTTCCTAAAGATCTACAGCAATCTGGGACGTGGTTCAAGTTCAAGACTTGAAGGAAGCAAAGACGCCCTGCATGGTTACAATGGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGCTGCACTCATACAACTaGAACATCAAGAGGTATTTC +
Preference number: 2 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGLHSYN*NIKRYF
Trigger: GAAATACCTCTTGATGTTGCAGTTGTATGAGTGCAG...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAACCACAGTCCTGTTTTaGGGTTTTTCCAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTTTVLF*GFSKAS
Trigger: GCTGGCCTTGGAAAAACCCCAAAACAGGACTGTGGT...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATTTATTCTCTCATGACTaGGGAATGCAGCCACCCACT +
Preference number: 2 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNLFSHD*GMQPPT
Trigger: AGTGGGTGGCTGCATTCCCCAGTCATGAGAGAATAA...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp CATTGTAACCATGCAGGGCGTCTTTGCTTCCTTCAAGTCTTGAACTaGAACCACGTCCCAGATTGCTGTAGATCTTTAGGAAGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: HCNHAGRLCFLQVLN*NHVPDCCRSLGSRH
Trigger: ATGCCTGCTTCCTAAAGATCTACAGCAATCTGGGACGTGGTTCAAGTTCAAGACTTGAAGGAAGCAAAGACGCCCTGCATGGTTACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCGTGGGACATGAGAATTaGGCTGGGAACAAGGAACCC +
Preference number: 2 (lower is better)
Translates to: DGAKQLKIASTILQLQIFVGHEN*AGNKEP
Trigger: GGGTTCCTTGTTCCCAGCCCAATTCTCATGTCCCAC...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp ATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTaGTGTCACCAAATGGGGGTGCAGCTGTGTGATATCTGTGCAGTT +
Preference number: 2 (lower is better)
Translates to: IMPWRKVKIFTEGYA*CHQMGVQLCDICAV
Trigger: AACTGCACAGATATCACACAGCTGCACCCCCATTTGGTGACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCCATGTGTGCAGTGGTaGTTGCCAGCCCCATATACT +
Preference number: 2 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCPCVQW*LPAPYT
Trigger: AGTATATGGGGCTGGCAAGCACCACTGCACACATGG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCGACCTGCAATCTTCTTaGTTCTTGCACGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: DGAKQLKIASTILQLQIFDLQSS*FLHAAE
Trigger: CTCTGCTGCGTGCAAGAAGCAAGAAGATTGCAGGTC...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCGGGGTTTCACCATATTaGCCAGGCTGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: DGAKQLKIASTILQLQIFGVSPY*PGWSQS
Trigger: AGATTGAGACCAGCCTGGCCAATATGGTGAAACCCC...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp CTCATAAACTCCGTGAAGCTCAGTGCAGGTTCAATTCCCTGTGAGTaGCAGGGAAATGCAGATTCTCTTTGGAGAAGCTTGGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: LINSVKLSAGSIPCE*QGNADSLWRSLEVF
Trigger: AAAAACTTCCAAGCTTCTCCAAAGAGAATCTGCATTTCCCTGCAACTCACAGGGAATTGAACCTGCACTGAGCTTCACGGAGTTTATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp TGTGGATACGGTGATGAAGCTACAAAGTCACACTATCCTATGGCCTaGTGTTTAGATGGAGCAAAGCAACTAAAAATTGCCTCAACAATC +
Preference number: 2 (lower is better)
Translates to: CGYGDEATKSHYPMA*CLDGAKQLKIASTI
Trigger: GATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATCTAAACACAAGGCCATAGGATAGTGTGACTTTGTAGCTTCATCACCGTATCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCCACAGCAAGGGTGTTTaGAAACACGATCTGAAATTT +
Preference number: 2 (lower is better)
Translates to: DGAKQLKIASTILQLQIFHSKGV*KHDLKF
Trigger: AAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTG...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR GCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCAGAAATGCTCCATGTaGATTAACTGTCACTCTTTA +
Preference number: 2 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCQKCSM*INCHSL
Trigger: TAAAGAGTGACAGTTAATGCACATGGAGCATTTCTG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp CTTACTCTCTGGTGCTATTTTATGGCAACAGCTCTAAGTGCCACTTaGGTACCTGATACTCTTTATTTCTTATTGGGAGAGAATAACATA +
Preference number: 2 (lower is better)
Translates to: LTLWCYFMATALSAT*VPDTLYFLLGENNI
Trigger: TATGTTATTCTCTCCCAATAAGAAATAAAGAGTATCAGGTACCAAAGTGGCACTTAGAGCTGTTGCCATAAAATAGCACCAGAGAGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 90 bp GAACCCAGAATTCAGCTCCTGTTATACAAAATTTGTAAAAATTTATaGCCTTGGCGTAAAGTGACAATCATGCCTTGGCGTAAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: EPRIQLLLYKICKNL*PWRKVTIMPWRKVK
Trigger: TTTCACTTTACGCCAAGGCATGATTGTCACTTTACGCCAAGGCAATAAATTTTTACAAATTTTGTATAACAGGAGCTGAATTCTGGGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GTGCCCAGATCTGCCTGGGGGACACACGAGCCTCGCTaGCAGTGCCGGGCACGCAGCCTCTCCAGTCCTGCC +
Preference number: 3 (lower is better)
Translates to: VPRSAWGTHEPR*QCRARSLSSPA
Trigger: GGCAGGACTGGAGAGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTGGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGCCTCTTGCCCCTCCCTaGACCGAGTCCTGCGCCCCC +
Preference number: 3 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKPLAPP*TESCAP
Trigger: GGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAGG...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
3UTR GCA 72 bp AGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTaGCGGGCACGCAGCCTCTCCAGTCCTGCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: RSAWGTHEPRCQ*RARSLSSPAVS
Trigger: GCTGACGGCAGGACTGGAGAGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCCTCTTGCCCCTCCCTaGACCGAGTCCTGCGCCCCC +
Preference number: 3 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQPLAPP*TESCAP
Trigger: GGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAGG...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
3UTR GCA 72 bp CAGCGCCAGCACCACCGCCCTACACTCAAGAGAGGCTaGCCGGCCCCCACCAGACAGGGGTCAGAGCTAGGA +
Preference number: 3 (lower is better)
Translates to: QRQHHRPTLKRG*PAPTRQGSELG
Trigger: TCCTAGCTCTGACCCCTGTCTGGTGGGGGCCGGGCAGCCTCTCTTGAGTGTAGGGCGGTGGTGCTGGCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTaGAGAGCAACCACGTCTGTTCGGAAGCCAGCGGCC +
Preference number: 3 (lower is better)
Translates to: QSLGPAGSPCAS*RATTSVRKPAA
Trigger: GGCCGCTGGCTTCCGAACAGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp TCGCTGCCAGTGCCGGGCACGCAGCCTCTCCAGTCCTaGCGTCAGCAACCGCCTCCGGCCCTCATGTCAAAT +
Preference number: 3 (lower is better)
Translates to: SLPVPGTQPLQS*RQQPPPALMSN
Trigger: ATTTGACATGAGGGCCGGAGGCGGTTGCTGACGGCAGGACTGGAGAGGCTGCGTGCCCGGCACTGGCAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CTGCCACCTCCCCCACACGGGGTCTCGGCCTCTGGCTaGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: LPPPPHGVSASG*SLLSAENQPAL
Trigger: CAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGGTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GTGACTGCCACCTCCCCCACACGGGGTCTCGGCCTCTaGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: VTATSPTRGLGL*LEPSFGGESAC
Trigger: GCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGGTGGCAGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp GGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTaGTGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GSKPHTRPCPGL*WASWNGRLSSS
Trigger: GGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
3UTR CCA 72 bp TCCCCATTCAGCCCCGGGAGCCACTCGGATCAAGTCTaGCTGTATCCCGAGGGCGACCAGGACAGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: SPFSPGSHSDQV*LYPEGDQDSPV
Trigger: CACAGGGCTGTCCTGGTCGCCCTCGGGATACAGCCAGACTTGATCCGAGTGGCTCCCGGGGCTGAATGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CATCTGCGACAAAGCTTAGGGCCCGCGGGCTCCCCATaGGCCTCGTGGAGAGCAACCACGTCTGTTCGGAAG +
Preference number: 3 (lower is better)
Translates to: HLRQSLGPAGSP*ASWRATTSVRK
Trigger: CTTCCGAACAGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTGTCGCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GGCCTCCTGCGTCAGGCAAACCCGGGTCTGCTTACCTaGGCGAACCATTGCACCACTCCATCTGGGCGTGGT +
Preference number: 3 (lower is better)
Translates to: GLLRQANPGLLT*ANHCTTPSGRG
Trigger: ACCACGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGTAAGCAGACCCGGGTTTGCCTGACGCAGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp CCCCTTCCACCTGAGGGAGCCAGGAGGCTTGACACGTaGGGGAAGCCGCACACACTCCTCCATCGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: PLPPEGARRLDT*GKPHTLLHRLP
Trigger: AGGAAGACGATGGAGGAGTGTGTGCGGCTTCCCTCACGTGTCAAGCCTCCTGGCTCCCTCAGGTGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp ACTGCTTCACCAGCCCATCACCCCAGCCCTGTGGACTaGTCCTCCCTCACCTGGTTTCTACGTGGACCCACC +
Preference number: 3 (lower is better)
Translates to: TASPAHHPSPVD*SSLTWFLRGPT
Trigger: GGTGGGTCCACGTAGAAACCAGGTGAGGGAGGAGCAGTCCACAGGGCTGGGGTGATGGGCTGGTGAAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGATCTCTGATGGGCAAGTaGGAACGGCAGGCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGSLMGK*ERQALL
Trigger: GAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGA...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GCTTCCCTGGAGACGCATAAACCTGGGTTGGGAAAGTaGCCAGATCTGCCTGGGGGACACACGAGCCTCGCT +
Preference number: 3 (lower is better)
Translates to: ASLETHKPGLGK*PDLPGGHTSLA
Trigger: AGCGAGGCTCGTGTGTCCCCCAGGCAGATCTGGGCACTTTCCCAACCCAGGTTTATGCGTCTCCAGGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp TGGGGCAGAAGGGCCACCCCAAGCCGCCTGGAAGTGTaGCTGCCTGTTAGCCACCGCTGTCATACCTTTCAA +
Preference number: 3 (lower is better)
Translates to: WGRRATPSRLEV*LPVSHRCHTFQ
Trigger: TTGAAAGGTATGACAGCGGTGGCTAACAGGCAGGCACACTTCCAGGCGGCTTGGGGTGGCCCTTCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CAGGCAAACCCGGGTCTGCTTACCTGGGCGAACCATTaGACCACTCCATCTGGGCGTGGTGACAGTCCATGC +
Preference number: 3 (lower is better)
Translates to: QANPGLLTWANH*TTPSGRGDSPC
Trigger: GCATGGACTGTCACCACGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGTAAGCAGACCCGGGTTTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp AAATCCCCCGTCCTCGTGATGAATCAGGACAGCCAGTaGCCACAGCAGTTAGGACGCGGCCTCCTGCGTCAG +
Preference number: 3 (lower is better)
Translates to: KSPVLVMNQDSQ*PQQLGRGLLRQ
Trigger: CTGACGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACGAGGACGGGGGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GCACCGAGGCTTCCCTGGAGACGCATAAACCTGGGTTaGGAAAGTGCCCAGATCTGCCTGGGGGACACACGA +
Preference number: 3 (lower is better)
Translates to: APRLPWRRINLG*ESAQICLGDTR
Trigger: TCGTGTGTCCCCCAGGCAGATCTGGGCACTTTCCCAACCCAGGTTTATGCGTCTCCAGGGAAGCCTCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CATCACCCCAGCCCTGTGGACTGCTCCTCCCTCACCTaGTTTCTACGTGGACCCACCATTCTTGCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: HHPSPVDCSSLT*FLRGPTILALL
Trigger: CAGGAGGGCAAGAATGGTGGGTCCACGTAGAAACCAGGTGAGGGAGGAGCAGTCCACAGGGCTGGGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CCACGGGGGCCTTCCTTCACAGTCACCAGTCCACGCTaGCTCGCAAGCTCCACGGATGTCATGAGAGAATCT +
Preference number: 3 (lower is better)
Translates to: PRGPSFTVTSPR*LASSTDVMRES
Trigger: AGATTCTCTCATGACATCCGTGGAGCTTGCGAGGCAGCGTGGACTGGTGACTGTGAAGGAAGGCCCCCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GAATGGGCTCTCACTTGCCATGTGTGCAGTGGTGCTTaGCAGCCCCATATACTCAGCCAGGGCCATGCTGGC +
Preference number: 3 (lower is better)
Translates to: EWALTCHVCSGA*QPHILSQGHAG
Trigger: GCCAGCATGGCCCTGGCTGAGTATATGGGGCTGGCAAGCACCACTGCACACATGGCAAGTGAGAGCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GCAGAAGGGCCACCCCAAGCCGCCTGGAAGTGTGCCTaGCTGTTAGCCACCGCTGTCATACCTTTCAAACAC +
Preference number: 3 (lower is better)
Translates to: AEGPPQAAWKCA*LLATAVIPFKH
Trigger: GTGTTTGAAAGGTATGACAGCGGTGGCTAACAGGCAGGCACACTTCCAGGCGGCTTGGGGTGGCCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTaGTCTGTGCCCCCAACGTGTTTCAGTCATGGCACC +
Preference number: 3 (lower is better)
Translates to: LWLEPSFGGESA*SVPPTCFSHGT
Trigger: GGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GGGCATGACCTCTCGGATAGCTGGGAACACCGTCCCTaGTCATGTTTGGGGCGTGCTCCCCAGATACACACA +
Preference number: 3 (lower is better)
Translates to: GHDLSDSWEHRP*SCLGRAPQIHT
Trigger: TGTGTGTATCTGGGGAGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCAGCTATCCGAGAGGTCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGATGGCCCTCCCGGGTTaGCCCTGCTTCCTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGMALPG*PCFLSA
Trigger: GGCTGAGAGGAAGCAGGGCAAACCCGGGAGGGCCAT...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp AGGGGGACCGATGGTTGTCAGCTCCCAGGGCAATGCTaGGGACTCAGCAAAGGAACCATACAGGGAGACGTG +
Preference number: 3 (lower is better)
Translates to: RGTDGCQLPGQC*GLSKGTIQGDV
Trigger: CACGTCTCCCTGTATGGTTCCTTTGCTGAGTCCTCAGCATTGCCCTGGGAGCTGACAACCATCGGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp TTGGGCAGCTCTAAGGTTGGAAACTGCTTTCCCCACTaGGCTGAAGGCTGCCTCCTGGGATATGCACCCGGC +
Preference number: 3 (lower is better)
Translates to: LGSSKVGNCFPH*AEGCLLGYAPG
Trigger: GCCGGGTGCATATCCCAGGAGGCAGCCTTCAGCTCAGTGGGGAAAGCAGTTTCCAACCTTAGAGCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp AGTGGAATGGGCTCTCACTTGCCATGTGTGCAGTGGTaGTTGCCAGCCCCATATACTCAGCCAGGGCCATGC +
Preference number: 3 (lower is better)
Translates to: SGMGSHLPCVQW*LPAPYTQPGPC
Trigger: GCATGGCCCTGGCTGAGTATATGGGGCTGGCAAGCACCACTGCACACATGGCAAGTGAGAGCCCATTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp TGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTaGCCCCAACGTGTTTCAGTCATGGCACCCTCAAGG +
Preference number: 3 (lower is better)
Translates to: WSLLSAENQPAL*PQRVSVMAPSR
Trigger: CCTTGAGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CAAACACAGCACCTGCGAGGATGCAGGAGACAGATCTaGGAGGTACCACACCCAAGGTCACCTTTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: QTQHLRGCRRQI*EVPHPRSPFSP
Trigger: GGGGGAGAAAGGTGACCTTGGGTGTGGTACCTCCCAGATCTGTCTCCTGCATCCTCGCAGGTGCTGTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CCCTCGCTTAAGGAAGAGGGACCAGAACCACAAAGCTaGCATGTGGGTGAAGACGGCGCCTCTGGCCTAGAT +
Preference number: 3 (lower is better)
Translates to: PSLKEEGPEPQS*HVGEDGASGLD
Trigger: ATCTAGGCCAGAGGCGCCGTCTTCACCCACATGCCAGCTTTGTGGTTCTGGTCCCTCTTCCTTAAGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp TTTGGGGCGTGCTCCCCAGATACACACACGCATACCTaGCTCTCAGGGCAAGTTGCAGGTTGGCAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: FGACSPDTHTHT*LSGQVAGWQVL
Trigger: CAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGTGTATCTGGGGAGCACGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp TCTCGGATAGCTGGGAACACCGTCCCTGCTCATGTTTaGGGCGTGCTCCCCAGATACACACACGCATACCTG +
Preference number: 3 (lower is better)
Translates to: SRIAGNTVPAHV*GVLPRYTHAYL
Trigger: CAGGTATGCGTGTGTGTATCTGGGGAGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCAGCTATCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CCTTCCTTTTGGCTTGGGCATGACCTCTCGGATAGCTaGGAACACCGTCCCTGCTCATGTTTGGGGCGTGCT +
Preference number: 3 (lower is better)
Translates to: PSFWLGHDLSDS*EHRPCSCLGRA
Trigger: AGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCAGCTATCCGAGAGGTCATGCCCAAGCCAAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp CTTCTTGGAATGCAAATGAGGACAGCAACCGTCCTCTaGCCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: LLGMQMRTATVL*PGPSCPSRGPV
Trigger: CACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCTGTCCTCATTTGCATTCCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp CGCAAGCTCCACGGATGTCATGAGAGAATCTGCCCTTaGGAACGTGGGTGTAAGTGCTCATCACACCGGCGG +
Preference number: 3 (lower is better)
Translates to: RKLHGCHERICP*ERGCKCSSHRR
Trigger: CCGCCGGTGTGATGAGCACTTACACCCACGTTCTCAAGGGCAGATTCTCTCATGACATCCGTGGAGCTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp CATGAGGCAAATGCTGGAAAACCCTCCGGCCTCCCCTaGCACCTGAGCCATTGTAACCATGCAGGGCGTCTT +
Preference number: 3 (lower is better)
Translates to: HEANAGKPSGLP*HLSHCNHAGRL
Trigger: AAGACGCCCTGCATGGTTACAATGGCTCAGGTGTCAGGGGAGGCCGGAGGGTTTTCCAGCATTTGCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp TCCCTCAGGGGATCGGCTTGGCTTAGTGGCTGGATCTaGGTGGAATGGGCTCTCACTTGCCATGTGTGCAGT +
Preference number: 3 (lower is better)
Translates to: SLRGSAWLSGWI*VEWALTCHVCS
Trigger: ACTGCACACATGGCAAGTGAGAGCCCATTCCACTCAGATCCAGCCACTAAGCCAAGCCGATCCCCTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp AATTCCTTGTTTCTGGTCTGTGGGGATGGTCAGATCTaGCCACCACTCTGGCACCGAGGCTTCCCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: NSLFLVCGDGQI*PPLWHRGFPGD
Trigger: GTCTCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGACCAGAAACAAGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CTTCTCAGTCAACAGCATTCCTCCAGAGACCTGAAGTaGCCACTGAAGCCTCCCCTAGACCCGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: LLSQQHSSRDLK*PLKPPLDPAQQ
Trigger: CTGTTGAGCCGGGTCTAGGGGAGGCTTCAGTGGCCACTTCAGGTCTCTGGAGGAATGCTGTTGACTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CACACGCATACCTGGCTCTCAGGGCAAGTTGCAGGTTaGCAAGTCCTGGTCAAATGCAGTGTGACTGCAGCC +
Preference number: 3 (lower is better)
Translates to: HTHTWLSGQVAG*QVLVKCSVTAA
Trigger: GGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGTACCTGGGCGAACCATaGCACCACTCCATCTGGGCG +
Preference number: 3 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQYLGEP*HHSIWA
Trigger: CGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGTA...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp CAGCAACCGCCTCCGGCCCTCATGTCAAATCACACCTaGCCAGAGTTGTCACCACAGTCCTGTTTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: QQPPPALMSNHT*PELSPQSCFGV
Trigger: AACCCCAAAACAGGACTGTGGTGACAACTCTGGTCAGGTGTGATTTGACATGAGGGCCGGAGGCGGTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATaGCTGGCCTGTAGCAGTTCAGAAGCAGCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: HVGVTRAQFLAQ*LACSSSEAAVA
Trigger: AGCCACTGCTGCTTCTGAACTGCTACAGGCCAGGCATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CTCCCTCACCTGGTTTCTACGTGGACCCACCATTCTTaGCCTCCTGGACCCCTAAACTGGCCCATGTGTTTA +
Preference number: 3 (lower is better)
Translates to: LPHLVSTWTHHS*PPGPLNWPMCL
Trigger: TAAACACATGGGCCAGTTTAGGGGTCCAGGAGGGCAAGAATGGTGGGTCCACGTAGAAACCAGGTGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GGCGGCACTGTTTCTCGAGGGAGGACATGCTCTTCTTaGAATGCAAATGAGGACAGCAACCGTCCTCTGACC +
Preference number: 3 (lower is better)
Translates to: GGTVSRGRTCSS*NANEDSNRPLT
Trigger: GGTCAGAGGACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GCTGGGAACAAGGAACCCTCACATGGATCGTCAGGCTaGAGGAGTAGGTGGGCACCATACTTCCTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: AGNKEPSHGSSG*RSRWAPYFLGE
Trigger: TTCTCCAAGGAAGTATGGTGCCCACCTACTCCTCCAGCCTGACGATCCATGTGAGGGTTCCTTGTTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp ATTACGACCGTGTATACATGGGTATACACGGAAGGGTaGAGGTGCCCCACCCTCCCCGGAACACAGTTCACA +
Preference number: 3 (lower is better)
Translates to: ITTVYTWVYTEG*RCPTLPGTQFT
Trigger: TGTGAACTGTGTTCCGGGGAGGGTGGGGCACCTTCACCCTTCCGTGTATACCCATGTATACACGGTCGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp AGGGACACAGAGATGGCTAAATGGCAGCGAGCTGCGTaGCCAGAGGGCATGCTTACTCTCTGGTGCTATTTT +
Preference number: 3 (lower is better)
Translates to: RDTEMAKWQRAA*PEGMLTLWCYF
Trigger: AAAATAGCACCAGAGAGTAAGCATGCCCTCTGGCCACGCAGCTCGCTGCCATTTAGCCATCTCTGTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp TTTCAGTCATGGCACCCTCAAGGGCACAGACCACGTTaGGGTAACACGTGCCCAGTTCTTAGCACAATGCCT +
Preference number: 3 (lower is better)
Translates to: FQSWHPQGHRPR*GNTCPVLSTMP
Trigger: AGGCATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGGGTGCCATGACTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp TCCATCCCCTGTTCATTCCTTCCGTGGTCTACCCACTaGGAGGGAGCGCTCAAGGGGGAAACTAGAAGTTTT +
Preference number: 3 (lower is better)
Translates to: SIPCSFLPWSTH*EGALKGETRSF
Trigger: AAAACTTCTAGTTTCCCCCTTGAGCGCTCCCTCCCAGTGGGTAGACCACGGAAGGAATGAACAGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGCAGTACTGGATGTGTTaGCTCAGAATGACCCAGCCA +
Preference number: 3 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMQYWMC*LRMTQP
Trigger: TGGCTGGGTCATTCTGAGCAAACACATCCAGTACTG...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp GAAGGTATTTGGGCAGACAGCCAAGCCCGCATTGACTaGCACAGGGCCGTAACAGGAGAGATTTCTTCACAG +
Preference number: 3 (lower is better)
Translates to: EGIWADSQARID*HRAVTGEISSQ
Trigger: CTGTGAAGAAATCTCTCCTGTTACGGCCCTGTGTCAGTCAATGCGGGCTTGGCTGTCTGCCCAAATACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp AACGGAAGGTATTTGGGCAGACAGCCAAGCCCGCATTaGCTGACACAGGGCCGTAACAGGAGAGATTTCTTC +
Preference number: 3 (lower is better)
Translates to: NGRYLGRQPSPH*LTQGRNRRDFF
Trigger: GAAGAAATCTCTCCTGTTACGGCCCTGTGTCAGTCAATGCGGGCTTGGCTGTCTGCCCAAATACCTTCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GGATGTGTGTCTTCTTCTAAGAGACCGGTTCAAAGGTaGTGGCATGAGGCAAATGCTGGAAAACCCTCCGGC +
Preference number: 3 (lower is better)
Translates to: GCVSSSKRPVQR*WHEANAGKPSG
Trigger: GCCGGAGGGTTTTCCAGCATTTGCCTCATGCCAGCACCTTTGAACCGGTCTCTTAGAAGAAGACACACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp TGCAGGTTGGCAAGTCCTGGTCAAATGCAGTGTGACTaGAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: CRLASPGQMQCD*SLLRRLRLLCL
Trigger: CAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp AGATACACACACGCATACCTGGCTCTCAGGGCAAGTTaGAGGTTGGCAAGTCCTGGTCAAATGCAGTGTGAC +
Preference number: 3 (lower is better)
Translates to: RYTHAYLALRAS*RLASPGQMQCD
Trigger: GTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGTGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp TGTGTGTCTTCTTCTAAGAGACCGGTTCAAAGGTGCTaGCATGAGGCAAATGCTGGAAAACCCTCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: CVSSSKRPVQRC*HEANAGKPSGL
Trigger: GAGGCCGGAGGGTTTTCCAGCATTTGCCTCATGCCAGCACCTTTGAACCGGTCTCTTAGAAGAAGACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp TCACACCTGACCAGAGTTGTCACCACAGTCCTGTTTTaGGGTTTTTCCAAGGCCAGCCCTGTTGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: SHLTRVVTTVLF*GFSKASPVVLR
Trigger: CCTCAGAACAACAGGGCTGGCCTTGGAAAAACCCCAAAACAGGACTGTGGTGACAACTCTGGTCAGGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp AAGGGGGACTGGGTAATCCCAGAAATTCCTTGTTTCTaGTCTGTGGGGATGGTCAGATCTGCCCACCACTCT +
Preference number: 3 (lower is better)
Translates to: KGDWVIPEIPCF*SVGMVRSAHHS
Trigger: AGAGTGGTGGGCAGATCTGACCATCCCCACAGACCAGAAACAAGGAATTTCTGGGATTACCCAGTCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CCTGGTTTCTACGTGGACCCACCATTCTTGCCCTCCTaGACCCCTAAACTGGCCCATGTGTTTAGTTGTAGA +
Preference number: 3 (lower is better)
Translates to: PGFYVDPPFLPS*TPKLAHVFSCR
Trigger: TCTACAACTAAACACATGGGCCAGTTTAGGGGTCCAGGAGGGCAAGAATGGTGGGTCCACGTAGAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTGGGGACTTCTTTCGTTaGGAACTCCCACTACACAAG +
Preference number: 3 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACGDFFR*ELPLHK
Trigger: CTTGTGTAGTGGGAGTTCCAAACGAAAGAAGTCCCC...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp ATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCTaGGGGCTGTTGAACCCAGGGAGATACTGGAACCAG +
Preference number: 3 (lower is better)
Translates to: MASYSKANQEST*GLLNPGRYWNQ
Trigger: CTGGTTCCAGTATCTCCCTGGGTTCAACAGCCCTCAGGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CCTTCCAGGCTCTGTCCTGGGGACCTGCAATCTTCTTaGTTCTTGCACGCAGCAGAGTTAACTCAATTTTGG +
Preference number: 3 (lower is better)
Translates to: PSRLCPGDLQSS*FLHAAELTQFW
Trigger: CCAAAATTGAGTTAACTCTGCTGCGTGCAAGAAGCAAGAAGATTGCAGGTCCCCAGGACAGAGCCTGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GGGAGACGTGACCTGCTGGAACAGAAATGCTCCATGTaGATTAACTGTCACTCTTTAGTCCAGCGAGGCTTG +
Preference number: 3 (lower is better)
Translates to: GRRDLLEQKCSM*INCHSLVQRGL
Trigger: CAAGCCTCGCTGGACTAAAGAGTGACAGTTAATGCACATGGAGCATTTCTGTTCCAGCAGGTCACGTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GCACAGCAAGGGTGTTTGGAAACACGATCTGAAATTTaGCCTGCAATCCGTGGCATCGATTCCAACCACAGG +
Preference number: 3 (lower is better)
Translates to: AQQGCLETRSEI*PAIRGIDSNHR
Trigger: CCTGTGGTTGGAATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACGTTACATCAACTGGGTaGAAGGGGGACTGGGTAATC +
Preference number: 3 (lower is better)
Translates to: TQADVLPALSVFISKYMHVTSTG*KGDWVI
Trigger: GATTACCCAGTCCCCCTTCAACCCAGTTGATGTAAC...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACACCCCCATCAGTGTCGTaGACTTGTTCTCGCCCCAAT +
Preference number: 3 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTPPSVS*TCSRPN
Trigger: ATTGGGGCGAGAACAAGTCAACGACACTGATGGGGG...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp GGACTCAGCAAAGGAACCATACAGGGAGACGTGACCTaGTGGAACAGAAATGCTCCATGTGCATTAACTGTC +
Preference number: 3 (lower is better)
Translates to: GLSKGTIQGDVT*WNRNAPCALTV
Trigger: GACAGTTAATGCACATGGAGCATTTCTGTTCCAGCAGGTCACGTCTCCCTGTATGGTTCCTTTGCTGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp AGACCACTTACGATGCTCTTTCCTCATCCCCAGGGATaGCCAGCTACTCCAAAGCCAATCAAGAATCAACCT +
Preference number: 3 (lower is better)
Translates to: RPLTMLFPHPQG*PATPKPIKNQP
Trigger: AGGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAGAGCATCGTAAGTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp TGCCAGGGTCACTCACTACACACAGAGGAAAGACAATaGGCAAATGGCCATCGTAGAGAATTCGGTTGTGTG +
Preference number: 3 (lower is better)
Translates to: CQGHSLHTEERQ*ANGHRREFGCV
Trigger: CACACAACCGAATTCTCTACGATGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CACTGCCTGTCAGAACAGCACCTCTTCCTGCTCATCTaGAATGACACACGACACAAACTAGAAGAAAAGAGG +
Preference number: 3 (lower is better)
Translates to: HCLSEQHLFLLI*NDTRHKLEEKR
Trigger: CCTCTTTTCTTCTAGTTTGTGTCGTGTGTCATTCCAGATGAGCAGGAAGAGGTGCTGTTCTGACAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CCACTACCTTGTGAACTTCTGGGGACTTCTTTCGTTTaGAACTCCCACTACACAAGGCTAAGGCTTTCCACA +
Preference number: 3 (lower is better)
Translates to: PLPCELLGTSFV*NSHYTRLRLST
Trigger: TGTGGAAAGCCTTAGCCTTGTGTAGTGGGAGTTCCAAACGAAAGAAGTCCCCAGAAGTTCACAAGGTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp TTAAAGGGCACAGCAAGGGTGTTTGGAAACACGATCTaGAATTTGGCCTGCAATCCGTGGCATCGATTCCAA +
Preference number: 3 (lower is better)
Translates to: LKGTARVFGNTI*NLACNPWHRFQ
Trigger: TTGGAATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTGCCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp TCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATaGACACAAGGTCAAGCTTCCAGGCAACTAAGGAAA +
Preference number: 3 (lower is better)
Translates to: SSPPFLFSSPNT*TQGQASRQLRK
Trigger: TTTCCTTAGTTGCCTGGAAGCTTGACCTTGTGTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp GCTTTCAATCCCATTAAAGGGCACAGCAAGGGTGTTTaGAAACACGATCTGAAATTTGGCCTGCAATCCGTG +
Preference number: 3 (lower is better)
Translates to: AFNPIKGHSKGV*KHDLKFGLQSV
Trigger: CACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTGCCCTTTAATGGGATTGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp CAGAGTGTTACAATGTTACAATTATTCTCTCATGACTaGGGAATGCAGCCACCCACTGCCTGTCAGAACAGC +
Preference number: 3 (lower is better)
Translates to: QSVTMLQLFSHD*GMQPPTACQNS
Trigger: GCTGTTCTGACAGGCAGTGGGTGGCTGCATTCCCCAGTCATGAGAGAATAATTGTAACATTGTAACACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR-3UTR CAA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCACCACAGTCCTGTTTaGGGGTTTTTCCAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCHHSPV*GFFQGQ
Trigger: CTGGCCTTGGAAAAACCCCAAAACAGGACTGTGGTG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp CCTGTCAGAACAGCACCTCTTCCTGCTCATCTGGAATaGCACACGACACAAACTAGAAGAAAAGAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: PVRTAPLPAHLE*HTTQTRRKEGK
Trigger: TTTTCCCTCTTTTCTTCTAGTTTGTGTCGTGTGTCATTCCAGATGAGCAGGAAGAGGTGCTGTTCTGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp TTACAATGTTACAATTATTCTCTCATGACTGGGGAATaGAGCCACCCACTGCCTGTCAGAACAGCACCTCTT +
Preference number: 3 (lower is better)
Translates to: LQCYNYSLMTGE*SHPLPVRTAPL
Trigger: AAGAGGTGCTGTTCTGACAGGCAGTGGGTGGCTGCATTCCCCAGTCATGAGAGAATAATTGTAACATTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp AAATCTTCACAGAAGGGTATGCTTTGTGTCACCAAATaGGGGTGCAGCTGTGTGATATCTGTGCAGTTTGTG +
Preference number: 3 (lower is better)
Translates to: KSSQKGMLCVTK*GCSCVISVQFV
Trigger: CACAAACTGCACAGATATCACACAGCTGCACCCCCATTTGGTGACACAAAGCATACCCTTCTGTGAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR TCA 72 bp TCAACAATCCTGCAACTCCAGATCTTCAATTTACACTaGACACCGTACGCAATTGTTCTGGGCCCATCTTTC +
Preference number: 3 (lower is better)
Translates to: STILQLQIFNLH*TPYAIVLGPSF
Trigger: GAAAGATGGGCCCAGAACAATTGCGTACGGTGTTCAGTGTAAATTGAAGATCTGGAGTTGCAGGATTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR GCA 72 bp CTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTaGCATTTTAGAAACAGAGTGTTACAATGTTACAAT +
Preference number: 3 (lower is better)
Translates to: LPFPIMYQTTGG*HFRNRVLQCYN
Trigger: ATTGTAACATTGTAACACTCTGTTTCTAAAATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CCA 72 bp AATTTATTGCCTTGGCGTAAAGTGACAATCATGCCTTaGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCT +
Preference number: 3 (lower is better)
Translates to: NLLPWRKVTIMP*RKVKIFTEGYA
Trigger: AGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGTCACTTTACGCCAAGGCAATAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAAGCGGGCCTGGCTCATaGCGAGGGCGAGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQSGPGS*RGRGCG
Trigger: ACCGCAGCCTCGCCCTCGTCATGAGCCAGGCCCGCT...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCTCTTGCCCCTCCCTTaGCCGAGTCCTGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQALLPLP*PSPAPP
Trigger: TGGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCACAGTGGGAGGCCGGTaGAGTCACTCTTCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLTVGGR*SHSSAR
Trigger: GCGCGCGGAAGAGTGACTGCACCGGCCTCCCACTGT...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTGGAGAGCAACCACGTCTGGGCTGCTGGAGAACTaGGGTGCGCACTGGGCACCC +
Preference number: 4 (lower is better)
Translates to: QSLGPAGSPCASWRATTSGLLEN*GAHWAP
Trigger: GGGTGCCCAGTGCGCACCCCAGTTCTCCAGCAGCCC...AGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCTCCGCTCCAGATGCTaGGGACGGACTCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRLRSRC*GRTRSG
Trigger: CCCACTGCGAGTCCGTCCTCAGCATCTGGAGCGGAG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp TCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCACTCTTGCCCCTCCCTTaGCCGAGTCCTGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SCPSRGPVHPSQAASHTPLLPLP*PSPAPP
Trigger: TGGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAG...TGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGGGGCGAGGCTGCGGTTaGTGTAGAAGCCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRGRGCG*CRSLRS
Trigger: GGAGCGGAGGCTTCTACAGCAACCGCAGCCTCGCCC...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAACAGTGGGAGGCCGGTaGAGTCACTCTTCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQTVGGR*SHSSAR
Trigger: GCGCGCGGAAGAGTGACTGCACCGGCCTCCCACTGT...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCCCTTGACCGAGTCCTaGGCCCCCAGCATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQAPLTES*APSISG
Trigger: CCCACTGATGCTGGGGGCGCAGGACTCGGTCAAGGG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCACACACGAGCCTCGCTaGCAGTGCCGGGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLTHEPR*QCRARS
Trigger: GCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGT...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTGCCTGGAAGTGTGCCTaGCTGTTAGCCACCGCTGTC +
Preference number: 4 (lower is better)
Translates to: QICLGDTRASLPVPGTQPAWKCA*LLATAV
Trigger: GACAGCGGTGGCTAACAGGCAGGCACACTTCCAGGC...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGCGTGCGTGGTCTGGCTaGAGCGGAAGGCCACGACGT +
Preference number: 4 (lower is better)
Translates to: LCIPPRQQATHQAVSGSLRAWSG*SGRPRR
Trigger: ACGTCGTGGCCTTCCGCTCCAGCCAGACCACGCACG...CAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCGTGCGTGGTCTGGCTaGAGCGGAAGGCCACGACGT +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQARAWSG*SGRPRR
Trigger: ACGTCGTGGCCTTCCGCTCCAGCCAGACCACGCACG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCAGCCCGTGCGTGGTCTaGCTGGAGCGGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLSPCVV*LERKAT
Trigger: CGTGGCCTTCCGCTCCAGCCAGACCACGCACGGGCT...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGCCCGTGCGTGGTCTaGCTGGAGCGGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTSPCVV*LERKAT
Trigger: CGTGGCCTTCCGCTCCAGCCAGACCACGCACGGGCT...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGCCGGGGGTGTGGCTaGGTTGGTCAGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQGRGCG*VGQHGQ
Trigger: CTGTCCATGCTGACCAACCCAGCCACACCCCCGGCC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGGTGGGGAGGGGGCACTaGGGACACTTTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRVGRGH*GHFPWP
Trigger: TGGCCAGGGAAAGTGTCCCCAGTGCCCCCTCCCCAC...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAACCGTGGTCTACCCACTaGGAGGGAGCGCTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQPWSTH*EGALKG
Trigger: CCCCTTGAGCGCTCCCTCCCAGTGGGTAGACCACGG...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCTCCGCTCCAGATGCTaGGGACGGACTCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPLRSRC*GRTRSG
Trigger: CCCACTGCGAGTCCGTCCTCAGCATCTGGAGCGGAG...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCCCTCCGGCCTCCCCTaGCACCTGAGCCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGPSGLP*HLSHCN
Trigger: GTTACAATGGCTCAGGTGTCAGGGGAGGCCGGAGGG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGGCAAAGAGCCGTGACTaGGGCCGGGGTCAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERAKSRD*GRGQRR
Trigger: CCGACGCTGACCCCGGCCTCAGTCACGGCTCTTTGC...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTCATGCAAAGAGCCGTaGCTGAGGCCGGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKSCKEP*LRPGSA
Trigger: CGCTGACCCCGGCCTCAGTCACGGCTCTTTGCATGA...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTGGAGAGCAACCACGTCTCCACAGGGATCCCTGTaGGGAGTAAGGCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QSLGPAGSPCASWRATTSPQGSL*GVRLWG
Trigger: GCCCCAGAGCCTTACTCCTCACAGGGATCCCTGTGG...AGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGGGCGAGGCTGCGGTTaGTGTAGAAGCCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQGRGCG*CRSLRS
Trigger: GGAGCGGAGGCTTCTACAGCAACCGCAGCCTCGCCC...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTCTCATGACTGGGGAATaGAGCCACCCACTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QICLGDTRASLPVPGTQPLMTGE*SHPLPV
Trigger: GACAGGCAGTGGGTGGCTGCATTCCCCAGTCATGAG...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTGGCCCTCCCGGGTTTaGCCTGCTTCCTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKWPSRV*PASSQP
Trigger: AGGCTGAGAGGAAGCAGGGCAAACCCGGGAGGGCCA...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGGCTGGAGAACTGGGGTaGGCACTGGGCACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERAGELG*ALGTPG
Trigger: CCCTGGGGTGCCCAGTGCGCACCCCAGTTCTCCAGC...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGGGCATCTTTCGGGTaGGACCGCCGGTATCCTCGA +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQGASFG*DRRYPR
Trigger: TCGAGGATACCGGCGGTCCCACCCGAAAGATGCCCC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGACCACGGCACTGGCGCTaGGGGGCATCTTTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGPRHWR*GASFGW
Trigger: CCACCCGAAAGATGCCCCCCAGCGCCAGTGCCGTGG...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCTGTAGAGCCCGTGCGTaGTCTGGCTGGAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQACRARA*SGWSGR
Trigger: CCTTCCGCTCCAGCCAGACCACGCACGGGCTCTACA...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCGCATCCAGGCCATCTaGGCCCCCACCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQARIQAI*APTFLQ
Trigger: CTGAAGGAAGGTGGGGGCCCAGATGGCCTGGATGCG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACAGGCCGGGGGTGTGGCTaGGTTGGTCAGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTGRGCG*VGQHGQ
Trigger: CTGTCCATGCTGACCAACCCAGCCACACCCCCGGCC...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTCCCGGGCCGGGGGTGTaGCTGGGTTGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLPGPGV*LGWSAW
Trigger: CCATGCTGACCAACCCAGCCACACCCCCGGCCCGGG...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCCCCTTCATCTTGATTTaGTACTGGCCCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLPFILI*YWPRAG
Trigger: CCCGGCCCGGGGCCAGTACCAAATCAAGATGAAGGG...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGAGCACAGGAGCCACGTaGGGCCCGGAGCATGCGGAC +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERSTGAT*GPEHAD
Trigger: GTCCGCATGCTCCGGGCCCCACGTGGCTCCTGTGCT...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTCTCGGCCTCTGGCTaGAGCCTTCTTTCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQVSASG*SLLSAE
Trigger: CTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGAC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCACCGTGTCCGGGTCTCTaGTGGGCAAGTTGGAACGGC +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPPCPGL*WASWNG
Trigger: GCCGTTCCAACTTGCCCATCAGAGACCCGGACACGG...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCAGCCAAGCCCGCATTaGCTGACACAGGGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRQPSPH*LTQGRN
Trigger: GTTACGGCCCTGTGTCAGTCAATGCGGGCTTGGCTG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAACCAGGACAGCCCTGTaGGCAGCAGTTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPTRTAL*AAVPLL
Trigger: CAGGAGGGGAACTGCTGCTCACAGGGCTGTCCTGGT...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGGCCGGGCACTATGCTaGGCAACTGCAGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQGRALC*ATAAQV
Trigger: GACCTGAGCTGCAGTTGCTCAGCATAGTGCCCGGCC...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR GCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTGCGAGGCGGCCGAGGTaGTGTAGAAGGGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPARRPR*CRRGSR
Trigger: GCGGGAACCCCTTCTACAGCACCTCGGCCGCCTCGC...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGACCCTTGACCGAGTCCTaGGCCCCCAGCATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGPLTES*APSISG
Trigger: CCCACTGATGCTGGGGGCGCAGGACTCGGTCAAGGG...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCTCTCCTCCTCCTCTTaGCCCTCCCTTGACCGAGTC +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQALSSSS*PSLDRV
Trigger: GACTCGGTCAAGGGAGGGGCAAGAGGAGGAGGAGAG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGACAGCCTCTCCAGTCCTaGCGTCAGCAACCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGQPLQS*RQQPPP
Trigger: CGGAGGCGGTTGCTGACGGCAGGACTGGAGAGGCTG...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTGTGGGGCCCGGAGCATaGGGACAGCAACACTCGCAA +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPVGPGA*GQQHSQ
Trigger: TTGCGAGTGTTGCTGTCCGCATGCTCCGGGCCCCAC...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTAGCCGCCTGGAAGTGTaGCTGCCTGTTAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: ATHQAVSGSLMGKLERQASRLEV*LPVSHR
Trigger: GCGGTGGCTAACAGGCAGGCACACTTCCAGGCGGCT...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTAGCAGCAATGGTGACTaGCACCTCCCCCACACGGGG +
Preference number: 4 (lower is better)
Translates to: ATHQAVSGSLMGKLERQASSNGD*HLPHTG
Trigger: CCCCGTGTGGGGGAGGTGGCAGTCACCATTGCTGCT...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTCTCATGTTTGGGGCGTaGTCCCCAGATACACACACG +
Preference number: 4 (lower is better)
Translates to: QICLGDTRASLPVPGTQPLMFGA*SPDTHT
Trigger: CGTGTGTGTATCTGGGGAGCACGCCCCAAACATGAG...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAATTCTCGAAGCGGGCCTaGCTCATGACGAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQFSKRA*LMTRAR
Trigger: CCTCGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAA...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAATCCGGCACAGGCTCCTaGCCACCATGCTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQSGTGS*PPCCGA
Trigger: AGCTCCACAGCATGGTGGCCAGGAGCCTGTGCCGGA...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCCGGGGAGTAGGCGTTaGTCAGGAAGCGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGPGSRR*SGSGSV
Trigger: GACACTTCCGCTTCCTGACCAACGCCTACTCCCCGG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCGCCCCCAGCATCAGTaGGTCGGAGAGGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERRPQHQ*VGEASS
Trigger: GGAGGATGCCTCTCCGACCCACTGATGCTGGGGGCG...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCCAAGGTCCAGGTCCCTaGAGGTTCTGTCAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLQGPGP*RFCQSV
Trigger: GACGGACTGACAGAACCTCCAGGGACCTGGACCTTG...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTAGAACGGAAGGTATTTaGGCAGACAGCCAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: QICLGDTRASLPVPGTQPRTEGI*ADSQAR
Trigger: GCGGGCTTGGCTGTCTGCCCAAATACCTTCCGTTCT...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTCGGGGTCTCGGCCTCTaGCTGGAGCCTTCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCRGLGL*LEPSFG
Trigger: GCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCG...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp ACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTaGGAACGGCAGGCTCTCCTCCTCCTCTTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: THQAVSGSLMGK*ERQALLLLLPL
Trigger: GAGGGGCAAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGGGTTTGGGAAGGCCTaGAGGCAGAGTCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKGFGKA*RQSRSC
Trigger: ACAGCTTCGACTCTGCCTTCAGGCCTTCCCAAACCC...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCGGGTTTGGGAAGGCCTaGAGGCAGAGTCGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGGFGKA*RQSRSC
Trigger: ACAGCTTCGACTCTGCCTTCAGGCCTTCCCAAACCC...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCACAGCAACCGTCCTCTaGCCAGGTCCATCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTTATVL*PGPSCP
Trigger: GGGACAGGATGGACCTGGTCAGAGGACGGTTGCTGT...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGCCTCCCCTGACACCTaGGCCATTGTAACCATGCAG +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQASPDT*AIVTMQ
Trigger: CTGCATGGTTACAATGGCTCAGGTGTCAGGGGAGGC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCACCAGCCCTGTTGTTCTaGGGGGCCACTCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASHTPGRVRVSDGQVGTAPALLF*GATLSR
Trigger: CCTGCTCAGAGTGGCCCCTCAGAACAACAGGGCTGG...TGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCAAGCCCGCATTGACTaGCACAGGGCCGTAACAGGA +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRQARID*HRAVTG
Trigger: TCCTGTTACGGCCCTGTGTCAGTCAATGCGGGCTTG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAGTATACACGGAAGGGTaGAGGTGCCCCACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGVYTEG*RCPTLP
Trigger: GGGGAGGGTGGGGCACCTTCACCCTTCCGTGTATAC...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTAGGAGGCTTGACACGTaGGGGAAGCCGCACACACTC +
Preference number: 4 (lower is better)
Translates to: GRVRVSDGQVGTAGSPPPRRLDT*GKPHTL
Trigger: GAGTGTGTGCGGCTTCCCTCACGTGTCAAGCCTCCT...AGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGAGTCGAAGCTGTTCTaGAGGGAGTCGAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQESKLF*RESRKG
Trigger: GCCCTTCCTCGACTCCCTGCAGAACAGCTTCGACTC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGATGTAGTTCTTGCCTaGCGCGTTCCGGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQDVVLA*RVPAQA
Trigger: AGCCTGTGCCGGAACGCGGCAGGCAAGAACTACATC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCGTGGTGACAGTCCATaGCTAACCCACAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQARGDSP*LTHRDP
Trigger: GGGATCCCTGTGGGTTAGGCATGGACTGTCACCACG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGGGCGGAGAATCAGCCTaGTCTGTGCCCCCAACGTGT +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQGGESA*SVPPTC
Trigger: ACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCC...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGAATGAATCGCTTGGCTaGAGATCCCGGCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKNESLG*RSRPGT
Trigger: AGTGCCCGGCCGGGATCTGCAGCCAAGCGATTCATT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR CCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGATCCGGCACAGGCTCCTaGCCACCATGCTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGSGTGS*PPCCGA
Trigger: AGCTCCACAGCATGGTGGCCAGGAGCCTGTGCCGGA...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTGGTCAGCATGGACAGTaGGAGGCCGGTGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPGQHGQ*EAGAVT
Trigger: AGTGACTGCACCGGCCTCCCACTGTCCATGCTGACC...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGGTGTGGCTGGGTTaGTCAGCATGGACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDGVWLG*SAWTVG
Trigger: TCCCACTGTCCATGCTGACCAACCCAGCCACACCCC...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCATCTTGATTTGGTACTaGCCCCGGGCCGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTILIWY*PRAGGV
Trigger: CACACCCCCGGCCCGGGGCCAGTACCAAATCAAGAT...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAATCTTGATTTGGTACTaGCCCCGGGCCGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPILIWY*PRAGGV
Trigger: CACACCCCCGGCCCGGGGCCAGTACCAAATCAAGAT...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCGGGGAGTAGGCGTTaGTCAGGAAGCGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPPGSRR*SGSGSV
Trigger: GACACTTCCGCTTCCTGACCAACGCCTACTCCCCGG...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCACACGGCCAAGGGGCATaGGATCTCCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPHGQGA*DLPTLP
Trigger: AGGAAGAGTGGGGAGATCCCATGCCCCTTGGCCGTG...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCAGGCTGGAGTGCAGTaGCTCAAGAGATCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQAQAGVQ*LKRSSH
Trigger: GTGGGAGGATCTCTTGAGCCACTGCACTCCAGCCTG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGCAAGGTGGAGGGTCTaGGGGTTGCTGAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDARWRV*GLLSPA
Trigger: TGCTGGACTCAGCAACCCCCAGACCCTCCACCTTGC...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTTGTTCATTCCTTCCGTaGTCTACCCACTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QICLGDTRASLPVPGTQPCSFLP*STHWEG
Trigger: TCCCTCCCAGTGGGTAGACCACGGAAGGAATGAACA...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGCACTCGGATCAAGTCTaGCTGTATCCCGAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKHSDQV*LYPEGD
Trigger: GTCGCCCTCGGGATACAGCCAGACTTGATCCGAGTG...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACAAGGGGAAGAAGAGCTTaGAGGGTGACAGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTRGRRA*RVTASP
Trigger: GGGGGAGGCTGTCACCCTCCAAGCTCTTCTTCCCCT...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGAGCCCAGCAGCTCTCTaGCGAGTCTCTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKSPAAL*RVSLQT
Trigger: AGTTTGGAGAGAGACTCGTCAGAGAGCTGCTGGGCT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCGACCCAGGGGGAGGGTaGTGTCCCGGATCTCATAAT +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTDPGGG*CPGSHN
Trigger: ATTATGAGATCCGGGACATCACCCTCCCCCTGGGTC...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCTGGGGCCATCTGGGTaGGGAAATCGCTATGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRLGPSG*GNRYGS
Trigger: AGAACCATAGCGATTTCCTCACCCAGATGGCCCCAG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCCCACCAGAGTTCCCTaGAGGAACCAGCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQPTRVP*RNQLPL
Trigger: TAGAGGCAGCTGGTTCCTTCAGGGAACTCTGGTGGG...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGAGGCTCCTGGCCACCATaGTGTGGAGCTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGGSWPP*CGAGAY
Trigger: ATAAGCCCCAGCTCCACAGCATGGTGGCCAGGAGCC...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCGGCTCCTGGCCACCATaGTGTGGAGCTGGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASGSWPP*CGAGAY
Trigger: ATAAGCCCCAGCTCCACAGCATGGTGGCCAGGAGCC...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTGGAGAGCAACCACGTCTAGTCTCTCTCCAAACTaGGCCCGGCTGTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSLGPAGSPCASWRATTSSLSPN*ARLYLF
Trigger: GAAGAGGTACAGCCGGGCGCAGTTTGGAGAGAGACT...AGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTGAAAGTGCCCAGATCTaGCTGGGGGACACACGAGCC +
Preference number: 4 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPESAQI*LGDTRA
Trigger: GGCTCGTGTGTCCCCCAGGCAGATCTGGGCACTTTC...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCAGCACCTGCGAGGATaGAGGAGACAGATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLQHLRG*RRQIWE
Trigger: CTCCCAGATCTGTCTCCTGCATCCTCGCAGGTGCTG...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGACCTGGGCGAACCATTaGACCACTCCATCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQTWANH*TTPSGR
Trigger: ACGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGT...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCTTTTCCAAAGCAAGCTaGAGAGGCCACCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGFSKAS*RGHRWG
Trigger: TCCCCACCGGTGGCCTCTGCAGCTTGCTTTGGAAAA...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCACTGCAGCTCAGGTCCTaGAGAGTCCCCGAGAGTACT +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPLQLRS*RVPEST
Trigger: AGTACTCTCGGGGACTCTGCAGGACCTGAGCTGCAG...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR CCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTTGTAGAGCCCGTGCGTaGTCTGGCTGGAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPCRARA*SGWSGR
Trigger: CCTTCCGCTCCAGCCAGACCACGCACGGGCTCTACA...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCTGTAGCACCTGGGTTTaGGAAGGCCTGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGCSTWV*EGLKAE
Trigger: CTCTGCCTTCAGGCCTTCCCAAACCCAGGTGCTACA...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCGGGGTGTGGCTGGGTTaGTCAGCATGGACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASGVWLG*SAWTVG
Trigger: TCCCACTGTCCATGCTGACCAACCCAGCCACACCCC...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGACCCTTCATCTTGATTTaGTACTGGCCCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGPFILI*YWPRAG
Trigger: CCCGGCCCGGGGCCAGTACCAAATCAAGATGAAGGG...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCACGGCCAAGGGGCATaGGATCTCCCCACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERHGQGA*DLPTLP
Trigger: AGGAAGAGTGGGGAGATCCCATGCCCCTTGGCCGTG...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCTCCCCATGCGCCTCGTaGAGAGCAACCACGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTSPCAS*RATTSV
Trigger: AACAGACGTGGTTGCTCTCCACGAGGCGCATGGGGA...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTGCACCGAGGCTTCCCTaGAGACGCATAAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: ATHQAVSGSLMGKLERQAAPRLP*RRINLG
Trigger: ACCCAGGTTTATGCGTCTCCAGGGAAGCCTCGGTGC...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAACGCTATGGTTCTTTCTaGCTCAGGGTCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQRYGSF*LRVWCG
Trigger: GCCACACCAGACCCTGAGCCAGAAAGAACCATAGCG...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCCCATACTGTGAGCTaGGGCCATCTGGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTPHTVS*GHLGEE
Trigger: TTCCTCACCCAGATGGCCCCAGCTCACAGTATGGGG...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGGAGGGACACAGAGATaGCTAAATGGCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKGGTQR*LNGSEL
Trigger: CAGCTCGCTGCCATTTAGCCATCTCTGTGTCCCTCC...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATCTAGGAGAATGTGCCTaGGCTGCTGGAGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDLGECA*AAGELG
Trigger: CCCCAGTTCTCCAGCAGCCCAGGCACATTCTCCTAG...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGGTCCCTGCTCATGTTTaGGGCGTGCTCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQVPAHV*GVLPRY
Trigger: GTATCTGGGGAGCACGCCCCAAACATGAGCAGGGAC...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTTGCTCCTCCCTCACCTaGTTTCTACGTGGACCCACC +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPCSSLT*FLRGPT
Trigger: GGTGGGTCCACGTAGAAACCAGGTGAGGGAGGAGCA...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGGCACCACCATGTTCTTaGGGACGTTGTCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRAPPCS*GRCLGQ
Trigger: TTGTCCCAGACAACGTCCTCAAGAACATGGTGGTGC...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGCACCACCATGTTCTTaGGGACGTTGTCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKAPPCS*GRCLGQ
Trigger: TTGTCCCAGACAACGTCCTCAAGAACATGGTGGTGC...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACATGTTCCCCTTCATCTTaGTTTGGTACTGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTCSPSS*FGTGPG
Trigger: CCCGGGGCCAGTACCAAATCAAGATGAAGGGGAACA...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCCCAGCGAGGCTTGGGTaGAGACGGCAGAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTPARLG*RRQKNE
Trigger: TTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGG...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCTTTCCCCACTGAGCTaGAGGCTGCCTCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERLSPLS*RLPPGI
Trigger: TATCCCAGGAGGCAGCCTTCAGCTCAGTGGGGAAAG...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp TCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGTGGGACCTGTGAATaGATCGCTTGGCTGCAGATC +
Preference number: 4 (lower is better)
Translates to: SCPSRGPVHPSQAASHTPGGTCE*IAWLQI
Trigger: GATCTGCAGCCAAGCGATTCATTCACAGGTCCCACC...TGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR TCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATTTCGGGTGGGACCTGTaGATGAATCGCTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDFGWDL*MNRLAA
Trigger: TGCAGCCAAGCGATTCATTCACAGGTCCCACCCGAA...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR GCA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTGATGTAGTTCTTGCCTaGCGCGTTCCGGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPDVVLA*RVPAQA
Trigger: AGCCTGTGCCGGAACGCGGCAGGCAAGAACTACATC...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGCGAACCAGAACACCTaGTGCCAGGTCTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKANQNT*CQVLFG
Trigger: ACCAAACAAGACCTGGCAGCAGGTGTTCTGGTTCGC...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGCGAACCAGAACACCTaGTGCCAGGTCTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQANQNT*CQVLFG
Trigger: ACCAAACAAGACCTGGCAGCAGGTGTTCTGGTTCGC...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATAGTCTCTCTCCAAACTaGGCCCGGCTGTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDSLSPN*ARLYLF
Trigger: GAAGAGGTACAGCCGGGCGCAGTTTGGAGAGAGACT...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGAGAACGTGGGTGTAAGTaGTCATCACACCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGERGCK*SSHRRH
Trigger: GTGCCGCCGGTGTGATGAGCACTTACACCCACGTTC...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTGTCACCAGTCCACGCTaGCTCGCAAGCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPVTSPR*LASSTD
Trigger: ATCCGTGGAGCTTGCGAGGCAGCGTGGACTGGTGAC...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCTTTCCCTCTCTCCCCTaGCCACCAGCTAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASFPSLP*PPAKQR
Trigger: CCTCTGCTTAGCTGGTGGGCAGGGGAGAGAGGGAAA...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTTCACCCAGGCTGGAGTaGAGTGGCTCAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: ATHQAVSGSLMGKLERQASPRLE*SGSRDP
Trigger: AGGATCTCTTGAGCCACTGCACTCCAGCCTGGGTGA...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTAGGCAAACCCGGGTCTaGTTACCTGGGCGAACCATT +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPRQTRV*LPGRTI
Trigger: AATGGTTCGCCCAGGTAAGCAGACCCGGGTTTGCCT...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTGGTGCATGTGATGCCTaGCAAGCAAGGTGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCGACDA*QARWRV
Trigger: GACCCTCCACCTTGCTTGGCAGGCATCACATGCACC...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCGGAAGGCCACGACGTaGAAGTACTTGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGRKATT*KYLRIF
Trigger: GAAGATCCTCAAGTACTTCCACGTCGTGGCCTTCCG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTTGTAGCACCTGGGTTTaGGAAGGCCTGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRVRVSDGQVGTAGSPPPCSTWV*EGLKAE
Trigger: CTCTGCCTTCAGGCCTTCCCAAACCCAGGTGCTACA...AGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAACTGGCCACCATGCTGTaGAGCTGGGGCTTATTCTTC +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQLATML*SWGLFF
Trigger: GAAGAATAAGCCCCAGCTCCACAGCATGGTGGCCAG...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAATTGGCCTGCAATCCGTaGCATCGATTCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQLACNP*HRFQPQ
Trigger: CTGTGGTTGGAATCGATGCCACGGATTGCAGGCCAA...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTCCTCATCCCCAGGGATaGCCAGCTACTCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCPHPQG*PATPKP
Trigger: TGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGG...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTGTGGCTGGATCTGAGTaGAATGGGCTCTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: GRVRVSDGQVGTAGSPPPVAGSE*NGLSLA
Trigger: GGCAAGTGAGAGCCCATTCCACTCAGATCCAGCCAC...AGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAATTCCAGGCTCTGTCCTaGGGACCTGCAATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQFQALS*GPAIFL
Trigger: CAAGAAGATTGCAGGTCCCCAGGACAGAGCCTGGAA...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTCCACCCCAAGCCGCCTaGAAGTGTGCCTGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLPPQAA*KCACLL
Trigger: TAACAGGCAGGCACACTTCCAGGCGGCTTGGGGTGG...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTGGAGAGCAACCACGTCTGGGCAAGTTGCAGGTTaGCAAGTCCTGGTCAAATGC +
Preference number: 4 (lower is better)
Translates to: QSLGPAGSPCASWRATTSGQVAG*QVLVKC
Trigger: GCATTTGACCAGGACTTGCCAACCTGCAACTTGCCC...AGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCTAGAGCCTTCCTTTTaGCTTGGGCATGACCTCTCG +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRLEPSF*LGHDLS
Trigger: CGAGAGGTCATGCCCAAGCCAAAAGGAAGGCTCTAG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCGACGTGGAAGTACTTaGGGATCTTCTCGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPRRGST*GSSRSG
Trigger: CCCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCG...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGTGTTCCCCTTCATCTTaGTTTGGTACTGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERCSPSS*FGTGPG
Trigger: CCCGGGGCCAGTACCAAATCAAGATGAAGGGGAACA...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGAGCCCAGCAGCTCTCTaGCGAGTCTCTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERSPAAL*RVSLQT
Trigger: AGTTTGGAGAGAGACTCGTCAGAGAGCTGCTGGGCT...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTCCCCATCAGTGTCGTTaGCTTGTTCTCGCCCCAATC +
Preference number: 4 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCPHQCR*LVLAPI
Trigger: GATTGGGGCGAGAACAAGTCAACGACACTGATGGGG...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAAGTGACAGCCTCCCCCTaGGAGAGCCAGTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: RQQATHQAVSGSLMGKLEVTASP*ESQLCS
Trigger: TGAACACAACTGGCTCTCTCAGGGGGAGGCTGTCAC...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAACTCGCAGTGGGAGATaGTGGTGGAGATCATGTAGC +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPTRSGR*WWRSCS
Trigger: GCTACATGATCTCCACCAGCATCTCCCACTGCGAGT...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp TCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAACTCGCAGTGGGAGATaGTGGTGGAGATCATGTAGC +
Preference number: 4 (lower is better)
Translates to: SCPSRGPVHPSQAASHTPTRSGR*WWRSCS
Trigger: GCTACATGATCTCCACCAGCATCTCCCACTGCGAGT...TGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACCCGGCTCAACAGCTaGCTTTTCCCATCATGTATC +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQATRLNS*LFPSCI
Trigger: GATACATGATGGGAAAAGGCAGCTGTTGAGCCGGGT...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGAGTGTGCAGTGGTGCTTaGCAGCCCCATATACTCAGC +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGVCSGA*QPHILS
Trigger: GCTGAGTATATGGGGCTGGCAAGCACCACTGCACAC...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACAGGGAGACGTGACCTaGTGGAACAGAAATGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTQGDVT*WNRNAP
Trigger: TGGAGCATTTCTGTTCCAGCAGGTCACGTCTCCCTG...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAAATCAGCCTGCTCTGTaGCCCCAACGTGTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPNQPAL*PQRVSV
Trigger: GACTGAAACACGTTGGGGGCACAGAGCAGGCTGATT...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATCAAATGCAGTGTGACTaGAGCCTCTTGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDQMQCD*SLLRRL
Trigger: GAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCACTATGCTGAGCAACTaGAGCTCAGGTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTTMLSN*SSGPAE
Trigger: CTCTGCAGGACCTGAGCTGCAGTTGCTCAGCATAGT...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR CCA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGCCACGGCACTGGCGCTaGGGGGCATCTTTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGPRHWR*GASFGW
Trigger: CCACCCGAAAGATGCCCCCCAGCGCCAGTGCCGTGG...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAAGTGGGAGATGCTGGTaGAGATCATGTAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQSGRCW*RSCSPG
Trigger: TCCTGGGCTACATGATCTCCACCAGCATCTCCCACT...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAACGGAAGGCCACGACGTaGAAGTACTTGAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQRKATT*KYLRIF
Trigger: GAAGATCCTCAAGTACTTCCACGTCGTGGCCTTCCG...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCGGTTCATGTAGCACCTaGGTTTGGGAAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLGSCST*VWEGLK
Trigger: CTTCAGGCCTTCCCAAACCCAGGTGCTACATGAACC...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTACCATGCTGTGGAGCTaGGGCTTATTCTTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GRVRVSDGQVGTAGSPPPTMLWS*GLFFSA
Trigger: TGCGCTGAAGAATAAGCCCCAGCTCCACAGCATGGT...AGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp GGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCAGCCTGCTCTGTCTGGCCACCATGCTGTaGAGCTGGGGCTTATTCTTC +
Preference number: 4 (lower is better)
Translates to: GSRPLAGAFFRRRISLLCLATML*SWGLFF
Trigger: GAAGAATAAGCCCCAGCTCCACAGCATGGTGGCCAG...ACAGAGCAGGCTGATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCCCCGGGCCGGGGGTGTaGCTGGGTTGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LSSSPGMASYSKANQESTPGPGV*LGWSAW
Trigger: CCATGCTGACCAACCCAGCCACACCCCCGGCCCGGG...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGGTGCCCAGATCTGCCTaGGGGACACACGAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMVPRSA*GTHEPR
Trigger: GCGAGGCTCGTGTGTCCCCCAGGCAGATCTGGGCAC...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTTCTGGTCTGTGGGGATaGTCAGATCTGCCCACCACT +
Preference number: 4 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPSGLWG*SDLPTT
Trigger: AGTGGTGGGCAGATCTGACCATCCCCACAGACCAGA...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACAGGTGGTTACATCAACTaGGTTGAAGGGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTGGYIN*VEGGLG
Trigger: ACCCAGTCCCCCTTCAACCCAGTTGATGTAACCACC...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACATTGCCATGTGTGCAGTaGTGCTTGCCAGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTLPCVQ*CLPAPY
Trigger: ATATGGGGCTGGCAAGCACCACTGCACACATGGCAA...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCGGGGTTTCACCATATTaGCCAGGCTGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGGVSPY*PGWSQS
Trigger: AGATTGAGACCAGCCTGGCCAATATGGTGAAACCCC...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGATGCAGGAGACAGATCTaGGAGGTACCACACCCAAGG +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGCRRQI*EVPHPR
Trigger: CCTTGGGTGTGGTACCTCCCAGATCTGTCTCCTGCA...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACACAAAGCTGGCATGTaGGTGAAGACGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQQATHQAVSGSLMGKLEHKAGM*VKTAPL
Trigger: CAGAGGCGCCGTCTTCACCCACATGCCAGCTTTGTG...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAAGACCTCTCGGATAGCTaGGAACACCGTCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RQQATHQAVSGSLMGKLEDLSDS*EHRPCS
Trigger: TGAGCAGGGACGGTGTTCCCAGCTATCCGAGAGGTC...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGCCATTCTTGCCCTCCTaGACCCCTAAACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RDESGQPVPTAVRTRPPAPFLPS*TPKLAH
Trigger: ATGGGCCAGTTTAGGGGTCCAGGAGGGCAAGAATGG...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTCGACGTGGAAGTACTTaGGGATCTTCTCGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLRRGST*GSSRSG
Trigger: CCCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCG...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCTGTGCACGTGGCAATaGATACAGGATCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQLCTWQ*IQDPHR
Trigger: TCGATGAGGATCCTGTATTCATTGCCACGTGCACAG...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACTGTGCACGTGGCAATaGATACAGGATCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTLCTWQ*IQDPHR
Trigger: TCGATGAGGATCCTGTATTCATTGCCACGTGCACAG...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTA +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGHVVGV*HFVQDV
Trigger: TACATCCTGTACAAAATGTCAGACGCCTACCACGTG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACAAACACTCGCAATAACTaGGTGAGGACGAGGCCCATA +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTNTRNN*VRTRPI
Trigger: TATGGGCCTCGTCCTCACTCAGTTATTGCGAGTGTT...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTGTGACTGCAGCCTCTTaGGGAGGCTCAGACTCTTGT +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLVTAAS*GGSDSC
Trigger: ACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCAC...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTTGCCTTGGCGTAAAGTaGCAATCATGCCTTGGCGTA +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPCLGVK*QSCLGV
Trigger: TACGCCAAGGCATGATTGTCACTTTACGCCAAGGCA...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGACCGGTTCAAAGGTaGTGGCATGAGGCAAATGCT +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTRPVQR*WHEANA
Trigger: AGCATTTGCCTCATGCCAGCACCTTTGAACCGGTCT...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGAGAATGTGTGAGGCTTaGGTAGTTGCAAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQRMCEA*VVARPH
Trigger: ATGGGGCCTTGCAACTACGCAAGCCTCACACATTCT...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCACGTGGCCAGAGGGCATaGTTACTCTCTGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: ASHTPGRVRVSDGQVGTARGQRA*LLSGAI
Trigger: AATAGCACCAGAGAGTAAGCATGCCCTCTGGCCACG...TGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCGTTGGGGTAACACGTaGCCAGTTCTTAGCACAATG +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPRWGNT*PVLSTM
Trigger: CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACG...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTCAGACTCTTGTGTTTaGAGGGATGTGCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKSDSCV*RDVLSQ
Trigger: CTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGA...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAAGGGACTGCATCCCCTaGTTCCATCCCCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ASHTPGRVRVSDGQVGTARDCIP*FHPLFI
Trigger: AATGAACAGGGGATGGAAGCAGGGGATGCAGTCCCT...TGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCTCTGGGACAAAGAGCTaGAAGAAGTCCACGGCACTG +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASSGTKS*KKSTAL
Trigger: CAGTGCCGTGGACTTCTTCCAGCTCTTTGTCCCAGA...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGCTTGAGGACGTTGTCTaGGACAAAGAGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LCIPPRQQATHQAVSGSLLEDVV*DKELEE
Trigger: TTCTTCCAGCTCTTTGTCCCAGACAACGTCCTCAAG...CAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCTTGAGGACGTTGTCTaGGACAAAGAGCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRLEDVV*DKELEE
Trigger: TTCTTCCAGCTCTTTGTCCCAGACAACGTCCTCAAG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCTCCCAAACCGCTCCTaGAACTTCTTGGCATACATG +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPLPNRS*NFLAYM
Trigger: CATGTATGCCAAGAAGTTCCAGGAGCGGTTTGGGAG...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCCCAAACCGCTCCTaGAACTTCTTGGCATACATG +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLLPNRS*NFLAYM
Trigger: CATGTATGCCAAGAAGTTCCAGGAGCGGTTTGGGAG...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAGGTTCATGTAGCACCTaGGTTTGGGAAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGGSCST*VWEGLK
Trigger: CTTCAGGCCTTCCCAAACCCAGGTGCTACATGAACC...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCCCTCGTTTTTCAGAATaGGCACCCACTCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTPRFSE*APTPHF
Trigger: GAAATGGGGAGTGGGTGCCCATTCTGAAAAACGAGG...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCGGGTTGAAGGGGGACTaGGTAATCCCAGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTGLKGD*VIPEIP
Trigger: AGGAATTTCTGGGATTACCCAGTCCCCCTTCAACCC...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGACACGATCTGAAATTTaGCCTGCAATCCGTGGCATC +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKTRSEI*PAIRGI
Trigger: GATGCCACGGATTGCAGGCCAAATTTCAGATCGTGT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTTGGGGACACTTTCCCTaGCCACTACCTTGTGAACTT +
Preference number: 4 (lower is better)
Translates to: GRVRVSDGQVGTAGSPPPWGHFP*PLPCEL
Trigger: AAGTTCACAAGGTAGTGGCCAGGGAAAGTGTCCCCA...AGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGAGTGGGACATGAGAATTaGGCTGGGAACAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGVGHEN*AGNKEP
Trigger: GGGTTCCTTGTTCCCAGCCCAATTCTCATGTCCCAC...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGCTTTGTGTCACCAAATaGGGGTGCAGCTGTGTGATA +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKLCVTK*GCSCVI
Trigger: TATCACACAGCTGCACCCCCATTTGGTGACACAAAG...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTA +
Preference number: 4 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTHVVGV*HFVQDV
Trigger: TACATCCTGTACAAAATGTCAGACGCCTACCACGTG...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR TCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGATGTCAAATCACACCTaGCCAGAGTTGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQMSNHT*PELSPQ
Trigger: CTGTGGTGACAACTCTGGTCAGGTGTGATTTGACAT...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGTTTGGAAACACGATCTaGAATTTGGCCTGCAATCCG +
Preference number: 4 (lower is better)
Translates to: LCIPPRQQATHQAVSGSLFGNTI*NLACNP
Trigger: CGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAA...CAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATCCTGCTCATCTGGAATaGCACACGACACAAACTAGA +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDPAHLE*HTTQTR
Trigger: TCTAGTTTGTGTCGTGTGTCATTCCAGATGAGCAGG...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAATGTGTTTGCTCAGAATaGCCCAGCCACCAAGACTTT +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQCVCSE*PSHQDF
Trigger: AAAGTCTTGGTGGCTGGGTCATTCTGAGCAAACACA...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATAAGCTGGCATGTGGGTaGAGACGGCGCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHKLACG*RRRLWP
Trigger: AGGCCAGAGGCGCCGTCTTCACCCACATGCCAGCTT...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGAAATATTCTCGAAGATaGGACACACAGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: LCIPPRQQATHQAVSGSLKYSRR*DTQKPR
Trigger: CCGTGGCTTCTGTGTGTCTCATCTTCGAGAATATTT...CAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCTGCCTTGGCGTAAAGTaGAAATCTTCACAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQACLGVK*KSSQKG
Trigger: ACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCA...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGATCTCTCTTAGAGCGTaGTCCAGCTCATTCTACCAC +
Preference number: 4 (lower is better)
Translates to: SDQVHPVPPEALCIPPRQISLRA*SSSFYH
Trigger: GTGGTAGAATGAGCTGGAGCACGCTCTAAGAGAGAT...CTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATCATGCAGGGCGTCTTTaGTTCCTTCAAGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDHAGRL*FLQVLN
Trigger: GTTCAAGACTTGAAGGAAGCAAAGACGCCCTGCATG...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATGAGCCTCGCTGCCAGTaGCGGGCACGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNEPRCQ*RARSLS
Trigger: GGAGAGGCTGCGTGCCCGGCACTGGCAGCGAGGCTC...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCAGACAACAGGTGGCTaGCATTTTAGAAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRQTTGG*HFRNRV
Trigger: CACTCTGTTTCTAAAATGGCAGCCACCTGTTGTCTG...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGGTGGGTGTTTTGTTTTaGATAAGGCTGGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LCIPPRQQATHQAVSGSLVGVLF*IRLGSS
Trigger: TGAGCTTCCCAGCCTTATGCAAAACAAAACACCCAC...CAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCGACGCTCAACACAACTaGAGTAATGGGAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SHTPGRVRVSDGQVGTAGDAQHN*SNGKVS
Trigger: TGAGACCTTCCCATTACTGCAGTTGTGTTGAGCGTC...GCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCTTCAAGATATTCTCCTaGTTAGCCTCCCGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQAFKIFS*LASRVA
Trigger: AGCTACTCGGGAGGCTAAGCAGGAGAATATCTTGAA...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTGACCTGCAATCTTCTTaGTTCTTGCACGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPDLQSS*FLHAAE
Trigger: CTCTGCTGCGTGCAAGAAGCAAGAAGATTGCAGGTC...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGTCTGTCCTGGGGACCTaGAATCTTCTTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RDESGQPVPTAVRTRPPASVLGT*NLLASC
Trigger: GCAAGAAGCAAGAAGATTGCAGGTCCCCAGGACAGA...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCAAGTCCTGGTCAAATaGAGTGTGACTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASQVLVK*SVTAAS
Trigger: AGAGGCTGCAGTCACACTGCATTTGACCAGGACTTG...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGCCCCTCCTGGAACACTaGTTCACCAGCCCATCACCC +
Preference number: 4 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMPLLEH*FTSPSP
Trigger: GGGTGATGGGCTGGTGAAGCAGTGTTCCAGGAGGGG...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCTTCACAGAAGGGTATaGTTTGTGTCACCAAATGGG +
Preference number: 4 (lower is better)
Translates to: PLTRSILSLQRPCASLPGLHRRV*FVSPNG
Trigger: CCCATTTGGTGACACAAAGCATACCCTTCTGTGAAG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATCGCATCCAGGCCATCTaGGCCCCCACCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHRIQAI*APTFLQ
Trigger: CTGAAGGAAGGTGGGGGCCCAGATGGCCTGGATGCG...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCTTAGGGAGCAGAGTGTaGGGAAAGACAATGAAAGTC +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQALGSRV*GKTMKV
Trigger: GACTTTCATTGTCTTTCCCCACACTCTGCTCCCTAA...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGGGACTTCTTTCGTTTaGAACTCCCACTACACAAGG +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQGTSFV*NSHYTR
Trigger: CCTTGTGTAGTGGGAGTTCCAAACGAAAGAAGTCCC...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTACCTTGTGAACTTCTaGGGACTTCTTTCGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLYLVNF*GLLSFG
Trigger: TCCAAACGAAAGAAGTCCCCAGAAGTTCACAAGGTA...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTACACACACGCATACCTaGCTCTCAGGGCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLTHTHT*LSGQVA
Trigger: TGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGTGT...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCCTTAGTGGAGAAAGGTaGGACATGAGAATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTLSGER*DMRIGL
Trigger: CAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAG...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAAATGGGGGCCAGGACTaGACATGTGGTTTGATTGCT +
Preference number: 4 (lower is better)
Translates to: ASHTPGRVRVSDGQVGTANGGQD*TCGLIA
Trigger: AGCAATCAAACCACATGTCCAGTCCTGGCCCCCATT...TGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCCTGGACCCCTAAACTaGCCCATGTGTTTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: ATHQAVSGSLMGKLERQAPGPLN*PMCLVV
Trigger: TACAACTAAACACATGGGCCAGTTTAGGGGTCCAGG...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp CTCTCGGATAGCTGGGAACACCGTCCCTGCTCATGTTaGGGGCGTGCTCCCCAGATACACACACGCATACCT +
Preference number: 4 (lower is better)
Translates to: LSDSWEHRPCSC*GRAPQIHTRIP
Trigger: AGGTATGCGTGTGTGTATCTGGGGAGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCAGCTATCCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATTCTGAGGGGCCACTCTaGGCAGGCAAACACTGCCAG +
Preference number: 4 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHSEGPL*AGKHCQ
Trigger: CTGGCAGTGTTTGCCTGCTCAGAGTGGCCCCTCAGA...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGACAATTATTCTCTCATaGCTGGGGAATGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RDESGQPVPTAVRTRPPATIILS*LGNAAT
Trigger: GGTGGCTGCATTCCCCAGTCATGAGAGAATAATTGT...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCAGGGAGCCAGGAGGCTTaGCACGTGAGGGAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPGSQEA*HVREAA
Trigger: TGCGGCTTCCCTCACGTGTCAAGCCTCCTGGCTCCC...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACGGGGAGGGCCGAGGCTaGTTTATCTGGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHGEGRG*FIWRAQ
Trigger: CTGAGCCCGCCAGATAAATCAGCCTCGGCCCTCCCC...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp TGTAAGTGCTCATCACACCGGCGGCACTGTTTCTCGAGGGAGGACATGCTCTTCCTCCCAGGGCAATGCTaGGGACTCAGCAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: CKCSSHRRHCFSREDMLFLPGQC*GLSKGT
Trigger: GGTTCCTTTGCTGAGTCCTCAGCATTGCCCTGGGAG...GAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCCGGTGTGATGAGCACTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTGGACATTGTACTTCTaGTGTGGATACGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKWTLYF*CGYGDE
Trigger: TTCATCACCGTATCCACATCAGAAGTACAATGTCCA...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCAACCAGAACACCTGCTaGCAGGTCTTGTTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLNQNTC*QVLFGL
Trigger: TAAACCAAACAAGACCTGGCAGCAGGTGTTCTGGTT...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp AGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCAACCAGAACACCTGCTaGCAGGTCTTGTTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: SHTPGRVRVSDGQVGTAGNQNTC*QVLFGL
Trigger: TAAACCAAACAAGACCTGGCAGCAGGTGTTCTGGTT...GCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAAACCACGTCCCAGATTaGTGTAGATCTTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQNHVPD*CRSLGS
Trigger: GCTTCCTAAAGATCTACAGCAATCTGGGACGTGGTT...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TGTAAGTGCTCATCACACCGGCGGCACTGTTTCTCGAGGGAGGACATGCTCTTCTGGGAACACCGTCCCTaGTCATGTTTGGGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: CKCSSHRRHCFSREDMLFWEHRP*SCLGRA
Trigger: AGCACGCCCCAAACATGAGCAGGGACGGTGTTCCCA...GAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCCGGTGTGATGAGCACTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTTGCCTCAACAATCCTaGAACTCCAGATCTTCAATT +
Preference number: 4 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLLPQQS*NSRSSI
Trigger: AATTGAAGATCTGGAGTTGCAGGATTGTTGAGGCAA...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCGCTCCTGGAACTTCTTaGCATACATGTTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLAPGTS*HTCLSA
Trigger: TGCAGACAAACATGTATGCCAAGAAGTTCCAGGAGC...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACCGCCCCCAGCATCAGTaGGTCGGAGAGGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHRPQHQ*VGEASS
Trigger: GGAGGATGCCTCTCCGACCCACTGATGCTGGGGGCG...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATAGGACATGCTCTTCTTaGAATGCAAATGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDRTCSS*NANEDS
Trigger: GCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCT...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGGGCATGCTTACTCTCTaGTGCTATTTTATGGCAACA +
Preference number: 4 (lower is better)
Translates to: LSLQRPCASLPGSKPHTRGMLTL*CYFMAT
Trigger: TGTTGCCATAAAATAGCACCAGAGAGTAAGCATGCC...CCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp CCTCCCTCACCTGGTTTCTACGTGGACCCACCATTCTaGCCCTCCTGGACCCCTAAACTGGCCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: PPSPGFYVDPPF*PSWTPKLAHVF
Trigger: AAACACATGGGCCAGTTTAGGGGTCCAGGAGGGCAAGAATGGTGGGTCCACGTAGAAACCAGGTGAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTCCGTGTCCGGGTCTCTaGTGGGCAAGTTGGAACGGC +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRPCPGL*WASWNG
Trigger: GCCGTTCCAACTTGCCCATCAGAGACCCGGACACGG...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCGTCGAATATGGAACCTaGTCAAGTAGGCACCAAACA +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASVEYGT*SSRHQT
Trigger: TGTTTGGTGCCTACTTGATCAGGTTCCATATTCGAC...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp TCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCATGTGGGGAAAGACAATaGAAGTCGAATATGGAACCT +
Preference number: 4 (lower is better)
Translates to: SCPSRGPVHPSQAASHTPCGERQ*KSNMEP
Trigger: AGGTTCCATATTCGACTTTCATTGTCTTTCCCCACA...TGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGGCCACATTTCACATTTaGGAACCCAGAATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQATHQAVSGSLMGKLERATFHI*EPRIQL
Trigger: GAGCTGAATTCTGGGTTCTCAAATGTGAAATGTGGC...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGAGCATACATGTTTGTCTaGACCACCATGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGAYMFV*TTMFLR
Trigger: CCTCAAGAACATGGTGGTGCAGACAAACATGTATGC...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCATTTGTCATCGTATCTaGAGATGTAGCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SHTPGRVRVSDGQVGTAGICHRI*RCSSGE
Trigger: CTCACCTGAGCTACATCTGCAGATACGATGACAAAT...GCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTCTCTCCTCCTCCTCTTaGCCCTCCCTTGACCGAGTC +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACLSSSS*PSLDRV
Trigger: GACTCGGTCAAGGGAGGGGCAAGAGGAGGAGGAGAG...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCCCTGGGTTGGGAAAGTaGCCAGATCTGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSSSPGMASYSKANQESTPGLGK*PDLPGG
Trigger: TCCCCCAGGCAGATCTGGGCACTTTCCCAACCCAGG...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCTGCACTCATACAACTaGAACATCAAGAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQALHSYN*NIKRYF
Trigger: GAAATACCTCTTGATGTTGCAGTTGTATGAGTGCAG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACACACTCAAGAGAGGCTaGCCGGCCCCCACCAGACAG +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHTLKRG*PAPTRQ
Trigger: CTGTCTGGTGGGGGCCGGGCAGCCTCTCTTGAGTGT...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATAGAACAGAGGTGCGCTaGCGGGGGCTGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDRTEVR*RGLTLG
Trigger: CCCAAGGGTCAGCCCCCGGCAGCGCACCTCTGTTCT...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTTCCTACCACGACTCTTaGCAAAATTTGGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGRVRVSDGQVGTAGSPPSYHDS*QNLAVS
Trigger: AGAAACAGCCAAATTTTGGCAAGAGTCGTGGTAGGA...AGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTATCTGCCCACCACTCTaGCACCGAGGCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACICPPL*HRGFPG
Trigger: TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGAT...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCCACAGCAAGGGTGTTTaGAAACACGATCTGAAATTT +
Preference number: 4 (lower is better)
Translates to: QVHPVPPEALCIPPRQQAHSKGV*KHDLKF
Trigger: AAATTTCAGATCGTGTTTCCAAACACCCTTGCTGTG...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACAGTTGCAAGGCCCCATaGCCCTCCCGGGTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHSCKAP*PSRVCP
Trigger: AGGGCAAACCCGGGAGGGCCATGGGGCCTTGCAACT...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTTGGCAGCGAGCTGCGTaGCCAGAGGGCATGCTTACT +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACWQRAA*PEGMLT
Trigger: AGTAAGCATGCCCTCTGGCCACGCAGCTCGCTGCCA...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp GACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTaGCAGGGATGTGCTAAGCCAGGTGCATGTGATGCC +
Preference number: 4 (lower is better)
Translates to: DCSLLRRLRLLC*QGCAKPGACDA
Trigger: GGCATCACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp ACACACGCATACCTGGCTCTCAGGGCAAGTTGCAGGTaGGCAAGTCCTGGTCAAATGCAGTGTGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: THAYLALRASCR*ASPGQMQCDCS
Trigger: GCTGCAGTCACACTGCATTTGACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCCAGGTATGCGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCATCCAAAAAGCCACTTTaGATCACATCTCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RPLTRSILSLQRPCASLPSKKPL*ITSLRQ
Trigger: TTGCCTTAGAGATGTGATTCAAAGTGGCTTTTTGGA...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGCTTAGTGGCTGGATCTaGGTGGAATGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMLSGWI*VEWALT
Trigger: AGTGAGAGCCCATTCCACTCAGATCCAGCCACTAAG...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp TGTAAGTGCTCATCACACCGGCGGCACTGTTTCTCGAGGGAGGACATGCTCTTCCTGGAGGAGAATGTGTaGGGCTTGCGTAGTTGCAAG +
Preference number: 4 (lower is better)
Translates to: CKCSSHRRHCFSREDMLFLEENV*GLRSCK
Trigger: CTTGCAACTACGCAAGCCTCACACATTCTCCTCCAG...GAAGAGCATGTCCTCCCTCGAGAAACAGTGCCGCCGGTGTGATGAGCACTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCACTGGAGCAGACAGAGTaGGGGTCAACCTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPLEQTE*GSTWLH
Trigger: GTGGAGCCAGGTTGACCCTCACTCTGTCTGCTCCAG...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCAACTGCTTTCCCCACTaGGCTGAAGGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSSSPGMASYSKANQESTNCFPH*AEGCLL
Trigger: CAGGAGGCAGCCTTCAGCTCAGTGGGGAAAGCAGTT...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTGCATACATGTTTGTCTaGACCACCATGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLAYMFV*TTMFLR
Trigger: CCTCAAGAACATGGTGGTGCAGACAAACATGTATGC...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR GCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTTCTCGAGGGAGGACATaGTCTTCTTGGAATGCAAAT +
Preference number: 4 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPSRGRT*SSWNAN
Trigger: ATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGA...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTTCAGTCCGTCCTACATaGTATTCTGTCCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPSVRPT*YSVLLD
Trigger: ATCCAGAAGGACAGAATAGCATGTAGGACGGACTGA...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACAGAATGTGCCTGGGCTaGTGGAGAACTGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHRMCLG*WRTGVR
Trigger: GCGCACCCCAGTTCTCCAGCAGCCCAGGCACATTCT...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGATCATCTCCAAATACATaGACACAAGGTCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGSSPNT*TQGQAS
Trigger: GGAAGCTTGACCTTGTGTGCATGTATTTGGAGATGA...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATTTCTCGAAGCGGGCCTaGCTCATGACGAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDFSKRA*LMTRAR
Trigger: CCTCGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAA...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACTTTGAATCACATCTCTAAGGCAAGGTCCAGGTCCCTGGAGGTTCTGTCAGTCATGTGCCTGGGCTGCTaGAGAACTGGGGTGCGCACT +
Preference number: 4 (lower is better)
Translates to: TLNHISKARSRSLEVLSVMCLGC*RTGVRT
Trigger: AGTGCGCACCCCAGTTCTCCAGCAGCCCAGGCACAT...GACTGACAGAACCTCCAGGGACCTGGACCTTGCCTTAGAGATGTGATTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp CCACTACACAAGGCTAAGGCTTTCCACAGCCAAAGCTaGGCAAGCCCTCGCTTAAGGAAGAGGGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: PLHKAKAFHSQS*ASPRLRKRDQN
Trigger: GTTCTGGTCCCTCTTCCTTAAGCGAGGGCTTGCCAAGCTTTGGCTGTGGAAAGCCTTAGCCTTGTGTAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp CAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTaGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: QCDCSLLRRLRL*CLQGCAKPGAC
Trigger: ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATGAAGAGCTTGGAGGGTaGCAGCCTCCCCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDEELGG*QPPPER
Trigger: TCTCTCAGGGGGAGGCTGTCACCCTCCAAGCTCTTC...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGGAGTCGAAGCTGTTCTaGAGGGAGTCGAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKESKLF*RESRKG
Trigger: GCCCTTCCTCGACTCCCTGCAGAACAGCTTCGACTC...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCCCGCGGGCTCCCCATaGGCCTCGTGGAGAGCAACC +
Preference number: 4 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCPAGSP*ASWRAT
Trigger: GGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCACCTCAAATACAACTaGACTCATACAACTGCAACA +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASHLKYN*THTTAT
Trigger: TGTTGCAGTTGTATGAGTGCAGTTGTATTTGAGGTG...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTGCGATCTTGGCTCACTaGAGCCTCTGCTTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRAILAH*SLCFPD
Trigger: ATCCGGGAAGCAGAGGCTGCAGTGAGCCAAGATCGC...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCATGCTTACTCTCTGGTaGTATTTTATGGCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SNRPLTRSILSLQRPCASMLTLW*YFMATA
Trigger: AGCTGTTGCCATAAAATAGCACCAGAGAGTAAGCAT...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCAGAAATGCTCCATGTaGATTAACTGTCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: QAVSGSLMGKLERQALLLQKCSM*INCHSL
Trigger: TAAAGAGTGACAGTTAATGCACATGGAGCATTTCTG...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACCTGGTCTCAATCTCCTaGCCTTGTGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHLVSIS*PCDPPA
Trigger: GGCAGGCGGATCACAAGGCCAGGAGATTGAGACCAG...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCTCAAGGGCACAGACCACGTTGGGGTAACACGTGCCCAGTTCTTAGCACAATGGGAGACGTGACCTGCTaGAACAGAAATGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: PQGHRPRWGNTCPVLSTMGDVTC*NRNAPC
Trigger: ACATGGAGCATTTCTGTTCCAGCAGGTCACGTCTCC...CATTGTGCTAAGAACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCCTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp GCAAGTCCTGGTCAAATGCAGTGTGACTGCAGCCTCTaGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: ASPGQMQCDCSL*RRLRLLCLQGC
Trigger: ACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTGACCAGGACTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATAGAAGCAGCAGTGGCTaGGAACCAGGAAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNRSSSG*EPGSPG
Trigger: TCCAGGGCTTCCTGGTTCTCAGCCACTGCTGCTTCT...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAATCTTCAATTTACACTaGACACCGTACGCAATTGTT +
Preference number: 4 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGIFNLH*TPYAIV
Trigger: AACAATTGCGTACGGTGTTCAGTGTAAATTGAAGAT...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCCAATGGCGGCTCTCCTaGACTAGGGATGAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LSSSPGMASYSKANQESTQWRLS*TRDECE
Trigger: TTCACACTCATCCCTAGTTCAGGAGAGCCGCCATTG...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGACAAAATTCTCACAATaGATAGCAGTCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RDESGQPVPTAVRTRPPATKFSQ*IAVFPA
Trigger: AGCTGGAAAGACTGCTATTCATTGTGAGAATTTTGT...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAGGGGATGGTCAGATCTaGCCACCACTCTGGCACCGA +
Preference number: 4 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTGDGQI*PPLWHR
Trigger: TCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCC...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTCCATGTGTGCAGTGGTaGTTGCCAGCCCCATATACT +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACPCVQW*LPAPYT
Trigger: AGTATATGGGGCTGGCAAGCACCACTGCACACATGG...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATCTCACTTGCCATGTGTaGAGTGGTGCTTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDLTCHV*SGACQP
Trigger: GGGCTGGCAAGCACCACTGCACACATGGCAAGTGAG...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTAATCAGGACAGCCAGTaGCCACAGCAGTTAGGACGC +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRNQDSQ*PQQLGR
Trigger: GCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATT...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACAGTGAAGACCAGCATTaGCAGCCCACTGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHSEDQH*QPTDPS
Trigger: ACTGGGGTCAGTGGGCTGGCAATGCTGGTCTTCACT...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAGGTCAGCATGGACAGTaGGAGGCCGGTGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTGQHGQ*EAGAVT
Trigger: AGTGACTGCACCGGCCTCCCACTGTCCATGCTGACC...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTTCCAGAGACCTGAAGTaGCCACTGAAGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRSRDLK*PLKPPL
Trigger: TAGGGGAGGCTTCAGTGGCCACTTCAGGTCTCTGGA...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATGCCATGAATGCAGACTaGAGGAGAATGTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHAMNAD*RRMCEA
Trigger: AGCCTCACACATTCTCCTCCAGTCTGCATTCATGGC...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATCCGGGTCTGCTTACCTaGGCGAACCATTGCACCACT +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDPGLLT*ANHCTT
Trigger: AGTGGTGCAATGGTTCGCCCAGGTAAGCAGACCCGG...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATGGGCACAGACCACGTTaGGGTAACACGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDGHRPR*GNTCPV
Trigger: AACTGGGCACGTGTTACCCCAACGTGGTCTGTGCCC...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATCATGGATCGTCAGGCTaGAGGAGTAGGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDHGSSG*RSRWAP
Trigger: TGGTGCCCACCTACTCCTCCAGCCTGACGATCCATG...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATAATGCAGCCACCCACTaGCTGTCAGAACAGCACCTC +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNNAATH*LSEQHL
Trigger: GAGGTGCTGTTCTGACAGGCAGTGGGTGGCTGCATT...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCAGAATGGGCTCTCACTTaGCATGTGTGCAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPEWALT*HVCSGA
Trigger: AGCACCACTGCACACATGGCAAGTGAGAGCCCATTC...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTTCTGGGACAAAGAGCTaGAAGAAGTCCACGGCACTG +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRSGTKS*KKSTAL
Trigger: CAGTGCCGTGGACTTCTTCCAGCTCTTTGTCCCAGA...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACAGTGGGAGATGCTGGTaGAGATCATGTAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHSGRCW*RSCSPG
Trigger: TCCTGGGCTACATGATCTCCACCAGCATCTCCCACT...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCGCTCAGGGTCTGGTGTaGCCAAGGGCTTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DGAKQLKIASTILQLQIFAQGLV*PRACPV
Trigger: GACAGGGCAAGCCCTTGGCCACACCAGACCCTGAGC...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATCAAGGAACCCTCACATaGATCGTCAGGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDQGTLT*IVRLEE
Trigger: CTCCTCCAGCCTGACGATCCATGTGAGGGTTCCTTG...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp ATCACACCTGACCAGAGTTGTCACCACAGTCCTGTTTaGGGGTTTTTCCAAGGCCAGCCCTGTTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ITPDQSCHHSPV*GFFQGQPCCSE
Trigger: CTCAGAACAACAGGGCTGGCCTTGGAAAAACCCCAAAACAGGACTGTGGTGACAACTCTGGTCAGGTGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCACAGCAACCGTCCTCTaGCCAGGTCCATCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: DGAKQLKIASTILQLQIFTATVL*PGPSCP
Trigger: GGGACAGGATGGACCTGGTCAGAGGACGGTTGCTGT...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACGCTAAGCAGAGGGAATaGGCAGGAATGCCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: TQADVLPALSVFISKYMHAKQRE*AGMPRF
Trigger: AAAACGAGGCATTCCTGCTCATTCCCTCTGCTTAGC...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGACCCCGCCTGTTCCCTaGCCTTTTAAACGAATTCAC +
Preference number: 4 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKTPPVP*PFKRIH
Trigger: GTGAATTCGTTTAAAAGGTCAGGGAACAGGCGGGGT...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATCCATACAGGGAGACGTaGCCTGCTGGAACAGAAATG +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNPYRET*PAGTEM
Trigger: CATTTCTGTTCCAGCAGGTCACGTCTCCCTGTATGG...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTAACAGCACCTCTTCCTaGTCATCTGGAATGACACAC +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACNSTSS*SSGMTH
Trigger: GTGTGTCATTCCAGATGAGCAGGAAGAGGTGCTGTT...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTCTTTTCCATATGACTTaGCTGACTTTTGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLLFHMT*LTFERC
Trigger: ACATCTTTCAAAAGTCAGGCAAGTCATATGGAAAAG...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCCAGTTCACACAGAGCTaGCACCAGCGCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: DGAKQLKIASTILQLQIFQFTQS*HQRQHH
Trigger: GTGGTGCTGGCGCTGGTGGCAGCTCTGTGTGAACTG...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAGCTCTCAGGGCAAGTTaGAGGTTGGCAAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTALRAS*RLASPG
Trigger: ACCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGC...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp CTTTCCTCATCCCCAGGGATGGCCAGCTACTCCAAAGCCAATCAAGAATCAACCAACCCAGGGAGATACTaGAACCAGATGCACTTCAAC +
Preference number: 4 (lower is better)
Translates to: LSSSPGMASYSKANQESTNPGRY*NQMHFN
Trigger: GTTGAAGTGCATCTGGTTCCAGTATCTCCCTGGGTT...GGTTGATTCTTGATTGGCTTTGGAGTAGCTGGCCATCCCTGGGGATGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTGTGAGGAAATCGCTATaGTTCTTTCTGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACVRKSL*FFLAQG
Trigger: ACCCTGAGCCAGAAAGAACCATAGCGATTTCCTCAC...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp ACCTTCCAGGCTCTGTCCTGGGGACCTGCAATCTTCTaGCTTCTTGCACGCAGCAGAGTTAACTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: TFQALSWGPAIF*LLARSRVNSIL
Trigger: CAAAATTGAGTTAACTCTGCTGCGTGCAAGAAGCAAGAAGATTGCAGGTCCCCAGGACAGAGCCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCATTCTTGGAATGCAAATaGGGACAGCAACCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPFLECK*GQQPSS
Trigger: AGAGGACGGTTGCTGTCCTCATTTGCATTCCAAGAA...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCAAGGTTCAATTCCCTGTaGGTTGCAGGGAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPRFNSL*VAGKCR
Trigger: TCTGCATTTCCCTGCAACTCACAGGGAATTGAACCT...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATGAGAAAGGTGGGACATaGGAATTGGGCTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNEKGGT*ELGWEQ
Trigger: TTGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTC...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGGATACTGGAACCAGATaGACTTCAACTAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGDTGTR*TSTRVT
Trigger: AGTGACTCTAGTTGAAGTGCATCTGGTTCCAGTATC...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGCAATTCCCTGTGAGTTaGAGGGAAATGCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQQFPVS*REMQIL
Trigger: GAGAATCTGCATTTCCCTGCAACTCACAGGGAATTG...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAACCATGCTGTGGAGCTaGGGCTTATTCTTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTTMLWS*GLFFSA
Trigger: TGCGCTGAAGAATAAGCCCCAGCTCCACAGCATGGT...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACACTTGTTTCTGGTCTGTaGGGATGGTCAGATCTGCCC +
Preference number: 4 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTLVSGL*GWSDLP
Trigger: GGGCAGATCTGACCATCCCCACAGACCAGAAACAAG...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTATTTGTCATCGTATCTaGAGATGTAGCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACICHRI*RCSSGE
Trigger: CTCACCTGAGCTACATCTGCAGATACGATGACAAAT...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCAGCTCCTGGAACTTCTTaGCATACATGTTTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPAPGTS*HTCLSA
Trigger: TGCAGACAAACATGTATGCCAAGAAGTTCCAGGAGC...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTCTCTTCCTGCTCATCTaGAATGACACACGACACAAA +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRLFLLI*NDTRHK
Trigger: TTTGTGTCGTGTGTCATTCCAGATGAGCAGGAAGAG...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCAAAAGGGGGACCGATaGTTGTCAGCTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCQKGDR*LSAPRA
Trigger: TGCCCTGGGAGCTGACAACCATCGGTCCCCCTTTTG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATGGCACCATACTTCCTTaGAGAAAACAGAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNGTILP*RKQKQA
Trigger: TGCTTGCTTCTGTTTTCTCCAAGGAAGTATGGTGCC...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTGGCTGGAGGAGTAGGTaGGCACCATACTTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCGWRSR*APYFLG
Trigger: TCCAAGGAAGTATGGTGCCCACCTACTCCTCCAGCC...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCACAGGGCTTAGCTTCCTaGCTATTTTCAACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPQGLAS*LFSTLL
Trigger: AAGAAGAGTTGAAAATAGCCAGGAAGCTAAGCCCTG...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp TTGAGGAGGCTCAGACTCTTGTGTTTGCAGGGATGTGCTAAGCCAGGTGCATGTGTGACAATCATGCCTTaGCGTAAAGTGAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: LRRLRLLCLQGCAKPGACVTIMP*RKVKIF
Trigger: GAAGATTTTCACTTTACGCCAAGGCATGATTGTCAC...ACATGCACCTGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp CATGCAGGGCGTCTTTGCTTCCTTCAAGTCTTGAACTaGAACCACGTCCCAGATTGCTGTAGATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: HAGRLCFLQVLN*NHVPDCCRSLG
Trigger: TCCTAAAGATCTACAGCAATCTGGGACGTGGTTCAAGTTCAAGACTTGAAGGAAGCAAAGACGCCCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp TGTAACCATGCAGGGCGTCTTTGCTTCCTTCAAGTCTaGAACTTGAACCACGTCCCAGATTGCTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: CNHAGRLCFLQV*NLNHVPDCCRS
Trigger: AGATCTACAGCAATCTGGGACGTGGTTCAAGTTCAAGACTTGAAGGAAGCAAAGACGCCCTGCATGGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTGCTCCACGGATGTCATaGGAGAATCTGCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCAPRMS*ENLPLR
Trigger: TCTCAAGGGCAGATTCTCTCATGACATCCGTGGAGC...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp TGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTaGTGTCACCAAATGGGGGTGCAGCTGTGTGATATC +
Preference number: 4 (lower is better)
Translates to: WRKVKIFTEGYA*CHQMGVQLCDI
Trigger: GATATCACACAGCTGCACCCCCATTTGGTGACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTGTCACCAAATGGGGGTaGAGCTGTGTGATATCTGTG +
Preference number: 4 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCVTKWG*SCVISV
Trigger: CACAGATATCACACAGCTGCACCCCCATTTGGTGAC...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTATCAGCAGAGAGGATTaGATATGGAAAGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRISRED*IWKGEN
Trigger: ATTTTCTCCTTTCCATATCCAATCCTCTCTGCTGAT...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
3UTR CAA 72 bp TCTCTTTGGAGAAGCTTGGAAGTTTTTGTGGGTGTTTaGTTTTGCATAAGGCTGGGAAGCTCATTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLWRSLEVFVGV*FCIRLGSSLLH
Trigger: ATGGAGCAATGAGCTTCCCAGCCTTATGCAAAACAAAACACCCACAAAAACTTCCAAGCTTCTCCAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR TCA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCTCTTTCCAGCTTCTTTaGCACGGATTTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: DGAKQLKIASTILQLQIFSFQLL*HGFPHH
Trigger: ATGATGAGGAAATCCGTGTCAAAGAAGCTGGAAAGA...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR GCA 90 bp AACTGTCACTCTTTAGTCCAGCGAGGCTTGGGTGAAGACGGCAGAAGAATGAATAAAGCAACTAAAAATTaGCTCAACAATCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: NCHSLVQRGLGEDGRRMNKATKN*LNNPAT
Trigger: AGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTT...ATTCATTCTTCTGCCGTCTTCACCCAAGCCTCGCTGGACTAAAGAGTGACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CCA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTGAAATTCCTTGTTTCTaGTCTGTGGGGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCEIPCF*SVGMVR
Trigger: TCTGACCATCCCCACAGACCAGAAACAAGGAATTTC...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS CCA 90 bp CTGGCCCCGGGCCGGGGGTGTGGCTGGGTTGGTCAGCATGGACAGTaGGAGGCCGGTGCAGTCACTCTTCCGCGCGCGGAGCAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: LAPGRGCGWVGQHGQ*EAGAVTLPRAEQAA
Trigger: TGCGGCTTGCTCCGCGCGCGGAAGAGTGACTGCACCGGCCTCCCACTGTCCATGCTGACCAACCCAGCCACACCCCCGGCCCGGGGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391860.7
ENST00000525115.1
ENST00000530424.1
CDS CCA 90 bp TTTGGTACTGGCCCCGGGCCGGGGGTGTGGCTGGGTTGGTCAGCATaGACAGTGGGAGGCCGGTGCAGTCACTCTTCCGCGCGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: FGTGPGPGVWLGWSA*TVGGRCSHSSARGA
Trigger: TGCTCCGCGCGCGGAAGAGTGACTGCACCGGCCTCCCACTGTCCATGCTGACCAACCCAGCCACACCCCCGGCCCGGGGCCAGTACCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391860.7
ENST00000525115.1
ENST00000530424.1
CDS-3UTR CAA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCACCTCTTGCCCCTCCCTaGACCGAGTCCTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: RPLTRSILSLQRPCASLPPLAPP*TESCAP
Trigger: GGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAGG...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CCA 90 bp CCTGCCGCGTTCCGGCACAGGCTCCTGGCCACCATGCTGTGGAGCTaGGGCTTATTCTTCAGCGCATCCAGGCCATCTGGGCCCCCACCT +
Preference number: 5 (lower is better)
Translates to: PAAFRHRLLATMLWS*GLFFSASRPSGPPP
Trigger: AGGTGGGGGCCCAGATGGCCTGGATGCGCTGAAGAATAAGCCCCAGCTCCACAGCATGGTGGCCAGGAGCCTGTGCCGGAACGCGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGAGGGAGCCAGGAGGCTaGACACGTGAGGGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKREPGG*TREGSR
Trigger: GCGGCTTCCCTCACGTGTCAAGCCTCCTGGCTCCCT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCCCCTTCATCTTGATTaGGTACTGGCCCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PLTRSILSLQRPCASLPGPLHLD*VLAPGR
Trigger: CCGGCCCGGGGCCAGTACCAAATCAAGATGAAGGGG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CCA 90 bp CGTTGTCTGGGACAAAGAGCTGGAAGAAGTCCACGGCACTGGCGCTaGGGGGCATCTTTCGGGTGGGACCGCCGGTATCCTCGAAGCGCG +
Preference number: 5 (lower is better)
Translates to: RCLGQRAGRSPRHWR*GASFGWDRRYPRSA
Trigger: CGCGCTTCGAGGATACCGGCGGTCCCACCCGAAAGATGCCCCCCAGCGCCAGTGCCGTGGACTTCTTCCAGCTCTTTGTCCCAGACAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS CCA 90 bp TCCTCTTGCCCCTCCCTTGACCGAGTCCTGCGCCCCCAGCATCAGTaGGTCGGAGAGGCATCCTCCAAGCCCAGCAGCTCTCTGACGAGT +
Preference number: 5 (lower is better)
Translates to: SSCPSLDRVLRPQHQ*VGEASSKPSSSLTS
Trigger: ACTCGTCAGAGAGCTGCTGGGCTTGGAGGATGCCTCTCCGACCCACTGATGCTGGGGGCGCAGGACTCGGTCAAGGGAGGGGCAAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CGTGATGAATCAGGACAGCCAGTGCCCACAGCAGTTAGGACGCGGCCTCCTGCGATGGCCCTCCCGGGTTaGCCCTGCTTCCTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RDESGQPVPTAVRTRPPAMALPG*PCFLSA
Trigger: GGCTGAGAGGAAGCAGGGCAAACCCGGGAGGGCCAT...CGCAGGAGGCCGCGTCCTAACTGCTGTGGGCACTGGCTGTCCTGATTCATCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp TCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAAAGGGGGACCGATGGTaGTCAGCTCCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: SCPSRGPVHPSQAASHTPKGDRW*SAPRAM
Trigger: CATTGCCCTGGGAGCTGACAACCATCGGTCCCCCTT...TGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGCACCACCATGTTCTaGAGGACGTTGTCTGGGACA +
Preference number: 5 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLCTTMF*RTLSGT
Trigger: TGTCCCAGACAACGTCCTCAAGAACATGGTGGTGCA...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCATGTTCCCCTTCATCTaGATTTGGTACTGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: PCASLPGSKPHTRPCPGLMFPFI*IWYWPR
Trigger: CCGGGGCCAGTACCAAATCAAGATGAAGGGGAACAT...GAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCACGACGTGGAAGTACTaGAGGATCTTCTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: PLTRSILSLQRPCASLPGTTWKY*RIFSKR
Trigger: CCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCGT...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCTCTCTGATGGGCAAGTaGGAACGGCAGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SNRPLTRSILSLQRPCASSLMGK*ERQALL
Trigger: GAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGA...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGACGCATAAACCTGGGTaGGGAAAGTGCCCAGATCTG +
Preference number: 5 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKTHKPG*GKCPDL
Trigger: CAGATCTGGGCACTTTCCCAACCCAGGTTTATGCGT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGATCAGTGTCGTTGACTaGTTCTCGCCCCAATCCCAG +
Preference number: 5 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKISVVD*FSPQSQ
Trigger: CTGGGATTGGGGCGAGAACAAGTCAACGACACTGAT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAAGGAGGCTCAGACTCTaGTGTTTGCAGGGATGTGCT +
Preference number: 5 (lower is better)
Translates to: PSQAASHTPGRVRVSDGQRRLRL*CLQGCA
Trigger: AGCACATCCCTGCAAACACAAGAGTCTGAGCCTCCT...TTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCGAACACCGTACGCAATaGTTCTGGGCCCATCTTTCC +
Preference number: 5 (lower is better)
Translates to: QVHPVPPEALCIPPRQQAEHRTQ*FWAHLS
Trigger: GGAAAGATGGGCCCAGAACAATTGCGTACGGTGTTC...GGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCGTGGACCCACCATTCTaGCCCTCCTGGACCCCTAAA +
Preference number: 5 (lower is better)
Translates to: SNRPLTRSILSLQRPCASVDPPF*PSWTPK
Trigger: TTTAGGGGTCCAGGAGGGCAAGAATGGTGGGTCCAC...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAAAAGGGGAAGAAGAGCTaGGAGGGTGACAGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RQQATHQAVSGSLMGKLEKGKKS*EGDSLP
Trigger: GGGGAGGCTGTCACCCTCCAAGCTCTTCTTCCCCTT...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS TCA 90 bp AGCATCAGTGGGTCGGAGAGGCATCCTCCAAGCCCAGCAGCTCTCTaGCGAGTCTCTCTCCAAACTGCGCCCGGCTGTACCTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: SISGSERHPPSPAAL*RVSLQTAPGCTSSR
Trigger: ACGTGAAGAGGTACAGCCGGGCGCAGTTTGGAGAGAGACTCGTCAGAGAGCTGCTGGGCTTGGAGGATGCCTCTCCGACCCACTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS GCA 90 bp GAATCGCTTGGCTGCAGATCCCGGCCGGGCACTATGCTGAGCAACTaGAGCTCAGGTCCTGCAGAGTCCCCGAGAGTACTTTGCACGAAG +
Preference number: 5 (lower is better)
Translates to: ESLGCRSRPGTMLSN*SSGPAESPRVLCTK
Trigger: CTTCGTGCAAAGTACTCTCGGGGACTCTGCAGGACCTGAGCTGCAGTTGCTCAGCATAGTGCCCGGCCGGGATCTGCAGCCAAGCGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGATGTTCTTGAGGACGTaGTCTGGGACAAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKMFLRT*SGTKSW
Trigger: CCAGCTCTTTGTCCCAGACAACGTCCTCAAGAACAT...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp GTGCATCCCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATTGCACCACCATGTTCTaGAGGACGTTGTCTGGGACA +
Preference number: 5 (lower is better)
Translates to: VHPSQAASHTPGRVRVSDCTTMF*RTLSGT
Trigger: TGTCCCAGACAACGTCCTCAAGAACATGGTGGTGCA...ATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGGGATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCCGCTCCTGGAACTTCTaGGCATACATGTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PLTRSILSLQRPCASLPGRSWNF*AYMFVC
Trigger: GCAGACAAACATGTATGCCAAGAAGTTCCAGGAGCG...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAATCTCTGATGGGCAAGTaGGAACGGCAGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RQQATHQAVSGSLMGKLESLMGK*ERQALL
Trigger: GAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGA...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCCCCCACACGGGGTCTCGGCCTCTGGCTGGAGCCTTCTTTCGGCGGAGAATCCATGCAGGGCGTCTTaGCTTCCTTCAAGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: PPPHGVSASGWSLLSAENPCRAS*LPSSLE
Trigger: TTCAAGACTTGAAGGAAGCAAAGACGCCCTGCATGG...ATTCTCCGCCGAAAGAAGGCTCCAGCCAGAGGCCGAGACCCCGTGTGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAAAGCTTAGGGCCCGCGGGCTCCCCATGCGCCTCGTGGAGAGCAACCACGTCTGTTACATCAACTGGGTaGAAGGGGGACTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: QSLGPAGSPCASWRATTSVTSTG*KGDWVI
Trigger: GATTACCCAGTCCCCCTTCAACCCAGTTGATGTAAC...AGACGTGGTTGCTCTCCACGAGGCGCATGGGGAGCCCGCGGGCCCTAAGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCTCCCAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGGGGGACTTCTTTCGTTaGGAACTCCCACTACACAAG +
Preference number: 5 (lower is better)
Translates to: PPRQQATHQAVSGSLMGKGDFFR*ELPLHK
Trigger: CTTGTGTAGTGGGAGTTCCAAACGAAAGAAGTCCCC...CTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAAAGAACGGAAGGTATTaGGGCAGACAGCCAAGCCCG +
Preference number: 5 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGKNGRY*GRQPSP
Trigger: CGGGCTTGGCTGTCTGCCCAAATACCTTCCGTTCTT...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS GCA 90 bp CAGATCCCGGCCGGGCACTATGCTGAGCAACTGCAGCTCAGGTCCTaGAGAGTCCCCGAGAGTACTTTGCACGAAGAGAGCTCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: QIPAGHYAEQLQLRS*RVPESTLHEESSSS
Trigger: AGAACTCGAGCTCTCTTCGTGCAAAGTACTCTCGGGGACTCTGCAGGACCTGAGCTGCAGTTGCTCAGCATAGTGCCCGGCCGGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS-3UTR CAA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTATGTTCTTGAGGACGTaGTCTGGGACAAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ATHQAVSGSLMGKLERQAMFLRT*SGTKSW
Trigger: CCAGCTCTTTGTCCCAGACAACGTCCTCAAGAACAT...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCGCCAGTGGAAGAACATaGTCTGACCCAGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SNRPLTRSILSLQRPCASASGRT*SDPEAE
Trigger: TTCAGCCTCTGGGTCAGACAATGTTCTTCCACTGGC...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCGGAAGTGTCCTTTGTaGTACCAGCAGATCAAGGAC +
Preference number: 5 (lower is better)
Translates to: QAVSGSLMGKLERQALLLRKCPL*YQQIKD
Trigger: GTCCTTGATCTGCTGGTACAACAAAGGACACTTCCG...GAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCCGGAAGTGTCCTTTGTaGTACCAGCAGATCAAGGAC +
Preference number: 5 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTRKCPL*YQQIKD
Trigger: GTCCTTGATCTGCTGGTACAACAAAGGACACTTCCG...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAAGCGGAAGTGTCCTTaGTTGTACCAGCAGATCAAG +
Preference number: 5 (lower is better)
Translates to: PLTRSILSLQRPCASLPGKRKCP*LYQQIK
Trigger: CTTGATCTGCTGGTACAACAAAGGACACTTCCGCTT...GCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp GTCTGTGGGGATGGTCAGATCTGCCCACCACTCTGGCACCGAGGCTTCCCTGGATGGGGTTTCACCATATaGGCCAGGCTGGTCTCAATC +
Preference number: 5 (lower is better)
Translates to: VCGDGQICPPLWHRGFPGWGFTI*ARLVSI
Trigger: GATTGAGACCAGCCTGGCCAATATGGTGAAACCCCA...TCCAGGGAAGCCTCGGTGCCAGAGTGGTGGGCAGATCTGACCATCCCCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACACCGACCACGGGAAGACGTaGTTCAAACTCGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ILSLQRPCASLPGSKPHTDHGKT*FKLEAF
Trigger: AAAAGCCTCGAGTTTGAACAACGTCTTCCCGTGGTC...GGTGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTTTCCACAGCCAAAGCTaGGCAAGCCCTCGCTTAAGG +
Preference number: 5 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPFHSQS*ASPRLR
Trigger: CCTTAAGCGAGGGCTTGCCAAGCTTTGGCTGTGGAA...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAGATCTGCCTGGGGGACACACGAGCCTCGCTGCCAGTGCCGGGCACGCAGCCTTGCCACATTTCACATTaGAGAACCCAGAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: QICLGDTRASLPVPGTQPCHISH*RTQNSA
Trigger: AGCTGAATTCTGGGTTCTCAAATGTGAAATGTGGCA...AGGCTGCGTGCCCGGCACTGGCAGCGAGGCTCGTGTGTCCCCCAGGCAGATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAAGCCAGTGGAAGAACATaGTCTGACCCAGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: RQQATHQAVSGSLMGKLEASGRT*SDPEAE
Trigger: TTCAGCCTCTGGGTCAGACAATGTTCTTCCACTGGC...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp GGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTAAGCGGAAGTGTCCTTaGTTGTACCAGCAGATCAAG +
Preference number: 5 (lower is better)
Translates to: GRVRVSDGQVGTAGSPPPKRKCP*LYQQIK
Trigger: CTTGATCTGCTGGTACAACAAAGGACACTTCCGCTT...AGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTCCTCCTCTTCACCACAGTCCTGTTTaGGGGTTTTTCCAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: RVRVSDGQVGTAGSPPPLHHSPV*GFFQGQ
Trigger: CTGGCCTTGGAAAAACCCCAAAACAGGACTGTGGTG...AAGAGGAGGAGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGCCACACAGACTGGACATGTGGTTaGATTGCTAAGGACCTAGCA +
Preference number: 5 (lower is better)
Translates to: PSCPSRGPVHPSQAASHTDWTCG*IAKDLA
Trigger: TGCTAGGTCCTTAGCAATCAAACCACATGTCCAGTC...TGTGTGGCTTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACAGAAGGGTATGCTTaGTGTCACCAAATGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QAASHTPGRVRVSDGQVGTEGYA*CHQMGV
Trigger: CACCCCCATTTGGTGACACAAAGCATACCCTTCTGT...TCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGCTCCTGGAACTTCTaGGCATACATGTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RQQATHQAVSGSLMGKLERSWNF*AYMFVC
Trigger: GCAGACAAACATGTATGCCAAGAAGTTCCAGGAGCG...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCTTCAAGTCTTGAACTaGAACCACGTCCCAGATTGC +
Preference number: 5 (lower is better)
Translates to: QQATHQAVSGSLMGKLERLQVLN*NHVPDC
Trigger: GCAATCTGGGACGTGGTTCAAGTTCAAGACTTGAAG...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATGGCTCTCAGGGCAAGTaGCAGGTTGGCAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHGSQGK*QVGKSW
Trigger: CCAGGACTTGCCAACCTGCAACTTGCCCTGAGAGCC...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCACACTATCCTATGGCCTaGTGTTTAGATGGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RPLTRSILSLQRPCASLPHYPMA*CLDGAK
Trigger: CTTTGCTCCATCTAAACACAAGGCCATAGGATAGTG...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp GACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGGCAGCAAGTCTTTCCAGCTTCTTaGACACGGATTTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: DQVHPVPPEALCIPPRQQVFPAS*TRISSS
Trigger: TGATGAGGAAATCCGTGTCAAAGAAGCTGGAAAGAC...TTGCTGCCTGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp AGCAACCGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCTCTTGGCATACATGTTaGTCTGCACCACCATGTTCT +
Preference number: 5 (lower is better)
Translates to: SNRPLTRSILSLQRPCASSWHTC*SAPPCS
Trigger: AGAACATGGTGGTGCAGACAAACATGTATGCCAAGA...GGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACGGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CGTCCTCTGACCAGGTCCATCCTGTCCCTCCAGAGGCCCTGTGCATCCCTCCCAGCAGCAGTAAATCCCTaGCTTCTCAAACTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: RPLTRSILSLQRPCASLPAAVNP*LLKLFK
Trigger: TTTGAAGAGTTTGAGAAGCAAGGGATTTACTGCTGC...TGGGAGGGATGCACAGGGCCTCTGGAGGGACAGGATGGACCTGGTCAGAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCACCCCTTCATCTTGATTaGGTACTGGCCCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPPLHLD*VLAPGR
Trigger: CCGGCCCGGGGCCAGTACCAAATCAAGATGAAGGGG...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS TCA 90 bp TCCGCTTTTTCCTCTTTCGCAGCTCCCGCTCTGTGCACGTGGCAATaGATACAGGATCCTCATCGATCAGGGGTTCATGTAGCACCTGGG +
Preference number: 5 (lower is better)
Translates to: SAFSSFAAPALCTWQ*IQDPHRSGVHVAPG
Trigger: CCCAGGTGCTACATGAACCCCTGATCGATGAGGATCCTGTATTCATTGCCACGTGCACAGAGCGGGAGCTGCGAAAGAGGAAAAAGCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CCA 90 bp CATGCTGTGGAGCTGGGGCTTATTCTTCAGCGCATCCAGGCCATCTaGGCCCCCACCTTCCTTCAGGTGGACATAAATCTGGATGATGAA +
Preference number: 5 (lower is better)
Translates to: HAVELGLILQRIQAI*APTFLQVDINLDDE
Trigger: TTCATCATCCAGATTTATGTCCACCTGAAGGAAGGTGGGGGCCCAGATGGCCTGGATGCGCTGAAGAATAAGCCCCAGCTCCACAGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp AGGCAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAAAATCCCAGAAATTCCTaGTTTCTGGTCTGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: RQQATHQAVSGSLMGKLENPRNS*FLVCGD
Trigger: ATCCCCACAGACCAGAAACAAGGAATTTCTGGGATT...TTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CGCACAATCAAGTCTCCCGCAGGAGTCTCCTCATTACGACCGTGTATACATGGGTGTGTGCAGTGGTGCTaGCCAGCCCCATATACTCAG +
Preference number: 5 (lower is better)
Translates to: RTIKSPAGVSSLRPCIHGCVQWC*PAPYTQ
Trigger: CTGAGTATATGGGGCTGGCAAGCACCACTGCACACA...CCCATGTATACACGGTCGTAATGAGGAGACTCCTGCGGGAGACTTGATTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAGCAAGCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGTCTCTTTGGAGAAGCTaGGAAGTTTTTGTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: QQATHQAVSGSLMGKLERSLWRS*EVFVGV
Trigger: AACACCCACAAAAACTTCCAAGCTTCTCCAAAGAGA...CCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGCTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTAGAGTTAACTCAATTTaGGTGACCAAGCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPRVNSI*VTKPHL
Trigger: CAGATGAGGCTTGGTCACCAAAATTGAGTTAACTCT...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATCCCCCATCAGTGTCGTaGACTTGTTCTCGCCCCAAT +
Preference number: 5 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHPPSVS*TCSRPN
Trigger: ATTGGGGCGAGAACAAGTCAACGACACTGATGGGGG...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTCTCCTGCTCTAAGTGCCACTTaGGTACCTGATACTCTTTAT +
Preference number: 5 (lower is better)
Translates to: TPGRVRVSDGQVGTAGSPALSAT*VPDTLY
Trigger: ATAAAGAGTATCAGGTACCAAAGTGGCACTTAGAGC...AGGAGAGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CGGCGGAGAATCAGCCTGCTCTGTGCCCCCAACGTGTTTCAGTCATGGCACCCTGCAGCAGTAAATCCCTaGCTTCTCAAACTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: RRRISLLCAPNVFQSWHPAAVNP*LLKLFK
Trigger: TTTGAAGAGTTTGAGAAGCAAGGGATTTACTGCTGC...AGGGTGCCATGACTGAAACACGTTGGGGGCACAGAGCAGGCTGATTCTCCGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp GCCACACACCAGGCCGTGTCCGGGTCTCTGATGGGCAAGTTGGAACGGCAGGCTAAATACTTGCTGTATTaGTCATCGTATCTGCAGATG +
Preference number: 5 (lower is better)
Translates to: ATHQAVSGSLMGKLERQAKYLLY*SSYLQM
Trigger: CATCTGCAGATACGATGACAAATACAGCAAGTATTT...AGCCTGCCGTTCCAACTTGCCCATCAGAGACCCGGACACGGCCTGGTGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATTACCTGGGCGAACCATaGCACCACTCCATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDYLGEP*HHSIWA
Trigger: CGCCCAGATGGAGTGGTGCAATGGTTCGCCCAGGTA...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS TCA 90 bp CTCTCCAAACTGCGCCCGGCTGTACCTCTTCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTAGGCATTGTTGATGGCGATGCTGAT +
Preference number: 5 (lower is better)
Translates to: LSKLRPAVPLHVVGV*HFVQDVGIVDGDAD
Trigger: ATCAGCATCGCCATCAACAATGCCTACATCCTGTACAAAATGTCAGACGCCTACCACGTGAAGAGGTACAGCCGGGCGCAGTTTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS GCA 90 bp TCGCTCCCAAACCGCTCCTGGAACTTCTTGGCATACATGTTTGTCTaGACCACCATGTTCTTGAGGACGTTGTCTGGGACAAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SLPNRSWNFLAYMFV*TTMFLRTLSGTKSW
Trigger: CCAGCTCTTTGTCCCAGACAACGTCCTCAAGAACATGGTGGTGCAGACAAACATGTATGCCAAGAAGTTCCAGGAGCGGTTTGGGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS-3UTR CAA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGACGACGTGGAAGTACTaGAGGATCTTCTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQTTWKY*RIFSKR
Trigger: CCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCGT...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGATGTTCCCCTTCATCTaGATTTGGTACTGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKMFPFI*IWYWPR
Trigger: CCGGGGCCAGTACCAAATCAAGATGAAGGGGAACAT...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACACAAGCCGATGTCCTCCCCGCCCTTTCTGTTTTCATCTCCAAATACATGCACGGACCTGCAATCTTCTaGCTTCTTGCACGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: TQADVLPALSVFISKYMHGPAIF*LLARSR
Trigger: TCTGCTGCGTGCAAGAAGCAAGAAGATTGCAGGTCC...GTGCATGTATTTGGAGATGAAAACAGAAAGGGCGGGGAGGACATCGGCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAAGGGTGTTTGGAAACACGATCTGAAATTTGGCCTGCAATCCGTGGCATCGATTGTGACTGCAGCCTCTaGAGGAGGCTCAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: QGCLETRSEIWPAIRGIDCDCSL*RRLRLL
Trigger: CAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACA...ATCGATGCCACGGATTGCAGGCCAAATTTCAGATCGTGTTTCCAAACACCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACACTGCCAGGGTCACTCACTACACACAGAGGAAAGACAATGAGCAAATGGCCATGGGCAGCTCTAAGGTaGGAAACTGCTTTCCCCACT +
Preference number: 5 (lower is better)
Translates to: TLPGSLTTHRGKTMSKWPWAALR*ETAFPT
Trigger: AGTGGGGAAAGCAGTTTCCAACCTTAGAGCTGCCCA...TGGCCATTTGCTCATTGTCTTTCCTCTGTGTGTAGTGAGTGACCCTGGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTCAGTACTGGATGTGTTaGCTCAGAATGACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRQYWMC*LRMTQP
Trigger: TGGCTGGGTCATTCTGAGCAAACACATCCAGTACTG...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp GTTTCTCGAGGGAGGACATGCTCTTCTTGGAATGCAAATGAGGACAGCAACCGTCTCAGACTCTTGTGTTaGCAGGGATGTGCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: VSRGRTCSSWNANEDSNRLRLLC*QGCAKP
Trigger: TGGCTTAGCACATCCCTGCAAACACAAGAGTCTGAG...ACGGTTGCTGTCCTCATTTGCATTCCAAGAAGAGCATGTCCTCCCTCGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACTTTGAATCACATCTCTAAGGCAAGGTCCAGGTCCCTGGAGGTTCTGTCAGTCTGCTTCCTTCAAGTCTaGAACTTGAACCACGTCCCA +
Preference number: 5 (lower is better)
Translates to: TLNHISKARSRSLEVLSVCFLQV*NLNHVP
Trigger: TGGGACGTGGTTCAAGTTCAAGACTTGAAGGAAGCA...GACTGACAGAACCTCCAGGGACCTGGACCTTGCCTTAGAGATGTGATTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CAAATGCAGTGTGACTGCAGCCTCTTGAGGAGGCTCAGACTCTTGTGTTTGCAGGCACAGCAAGGGTGTTaGGAAACACGATCTGAAATT +
Preference number: 5 (lower is better)
Translates to: QMQCDCSLLRRLRLLCLQAQQGC*ETRSEI
Trigger: AATTTCAGATCGTGTTTCCAAACACCCTTGCTGTGC...CTGCAAACACAAGAGTCTGAGCCTCCTCAAGAGGCTGCAGTCACACTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTCGTCCCTGCTCATGTTaGGGGCGTGCTCCCCAGATA +
Preference number: 5 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCRPCSC*GRAPQI
Trigger: TATCTGGGGAGCACGCCCCAAACATGAGCAGGGACG...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ATTTGGCTGTTTCTTAGTGGAGAAAGGTGGGACATGAGAATTGGGCTGGGAACAAGCCTTCCTTTTGGCTaGGGCATGACCTCTCGGATA +
Preference number: 5 (lower is better)
Translates to: IWLFLSGERWDMRIGLGTSLPFG*GMTSRI
Trigger: TATCCGAGAGGTCATGCCCAAGCCAAAAGGAAGGCT...TGTTCCCAGCCCAATTCTCATGTCCCACCTTTCTCCACTAAGAAACAGCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ACAATCATGCCTTGGCGTAAAGTGAAAATCTTCACAGAAGGGTATGCTTTGTGTGGAATGGGCTCTCACTaGCCATGTGTGCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TIMPWRKVKIFTEGYALCGMGSH*PCVQWC
Trigger: GCACCACTGCACACATGGCAAGTGAGAGCCCATTCC...ACACAAAGCATACCCTTCTGTGAAGATTTTCACTTTACGCCAAGGCATGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp ATTTGCCTAAGAAGGACCTCACGGGACGCTCAACACAACTGCAGTAATGGGAAGCAATCTTCTTGCTTCTaGCACGCAGCAGAGTTAACT +
Preference number: 5 (lower is better)
Translates to: ICLRRTSRDAQHNCSNGKQSSCF*HAAELT
Trigger: AGTTAACTCTGCTGCGTGCAAGAAGCAAGAAGATTG...CTTCCCATTACTGCAGTTGTGTTGAGCGTCCCGTGAGGTCCTTCTTAGGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp CCGGCTCAACAGCTGCCTTTTCCCATCATGTATCAGACAACAGGTGGCTGCCATAAATACTTGCTGTATTaGTCATCGTATCTGCAGATG +
Preference number: 5 (lower is better)
Translates to: PAQQLPFPIMYQTTGGCHKYLLY*SSYLQM
Trigger: CATCTGCAGATACGATGACAAATACAGCAAGTATTT...ATGGCAGCCACCTGTTGTCTGATACATGATGGGAAAAGGCAGCTGTTGAGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS-3UTR CAA 90 bp GATGGAGCAAAGCAACTAAAAATTGCCTCAACAATCCTGCAACTCCAGATCTTCAAATCCCCCACAAAGTaGTCAGGTAAGTCAGGGATA +
Preference number: 5 (lower is better)
Translates to: DGAKQLKIASTILQLQIFKSPTK*SGKSGI
Trigger: TATCCCTGACTTACCTGACAACTTTGTGGGGGATTT...GAAGATCTGGAGTTGCAGGATTGTTGAGGCAATTTTTAGTTGCTTTGCTCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS CCA 72 bp GGCCGGGGGTGTGGCTGGGTTGGTCAGCATGGACAGTaGGAGGCCGGTGCAGTCACTCTTCCGCGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: GRGCGWVGQHGQ*EAGAVTLPRAE
Trigger: CTCCGCGCGCGGAAGAGTGACTGCACCGGCCTCCCACTGTCCATGCTGACCAACCCAGCCACACCCCCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391860.7
ENST00000525115.1
ENST00000530424.1
CDS CCA 72 bp TTTGGTACTGGCCCCGGGCCGGGGGTGTGGCTGGGTTaGTCAGCATGGACAGTGGGAGGCCGGTGCAGTCAC +
Preference number: 6 (lower is better)
Translates to: FGTGPGPGVWLG*SAWTVGGRCSH
Trigger: GTGACTGCACCGGCCTCCCACTGTCCATGCTGACCAACCCAGCCACACCCCCGGCCCGGGGCCAGTACCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391860.7
ENST00000525115.1
ENST00000530424.1
CDS CCA 72 bp CTTGATTTGGTACTGGCCCCGGGCCGGGGGTGTGGCTaGGTTGGTCAGCATGGACAGTGGGAGGCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: LDLVLAPGRGCG*VGQHGQWEAGA
Trigger: TGCACCGGCCTCCCACTGTCCATGCTGACCAACCCAGCCACACCCCCGGCCCGGGGCCAGTACCAAATCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391860.7
ENST00000525115.1
ENST00000530424.1
CDS CCA 72 bp CCCTCCCTTGACCGAGTCCTGCGCCCCCAGCATCAGTaGGTCGGAGAGGCATCCTCCAAGCCCAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: PSLDRVLRPQHQ*VGEASSKPSSS
Trigger: AGAGCTGCTGGGCTTGGAGGATGCCTCTCCGACCCACTGATGCTGGGGGCGCAGGACTCGGTCAAGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 90 bp CCGTGCGTGGTCTGGCTGGAGCGGAAGGCCACGACGTGGAAGTACTaGAGGATCTTCTCGAAGCGGGCCTGGCTCATGACGAGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: PCVVWLERKATTWKY*RIFSKRAWLMTRAR
Trigger: CCTCGCCCTCGTCATGAGCCAGGCCCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCGTGGCCTTCCGCTCCAGCCAGACCACGCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS TCA 72 bp GGGTCGGAGAGGCATCCTCCAAGCCCAGCAGCTCTCTaGCGAGTCTCTCTCCAAACTGCGCCCGGCTGTACC +
Preference number: 6 (lower is better)
Translates to: GSERHPPSPAAL*RVSLQTAPGCT
Trigger: GGTACAGCCGGGCGCAGTTTGGAGAGAGACTCGTCAGAGAGCTGCTGGGCTTGGAGGATGCCTCTCCGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS GCA 72 bp TGCCTGCCGCGTTCCGGCACAGGCTCCTGGCCACCATaGTGTGGAGCTGGGGCTTATTCTTCAGCGCATCCA +
Preference number: 6 (lower is better)
Translates to: CLPRSGTGSWPP*CGAGAYSSAHP
Trigger: TGGATGCGCTGAAGAATAAGCCCCAGCTCCACAGCATGGTGGCCAGGAGCCTGTGCCGGAACGCGGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CCA 72 bp GGACAAAGAGCTGGAAGAAGTCCACGGCACTGGCGCTaGGGGGCATCTTTCGGGTGGGACCGCCGGTATCCT +
Preference number: 6 (lower is better)
Translates to: GQRAGRSPRHWR*GASFGWDRRYP
Trigger: AGGATACCGGCGGTCCCACCCGAAAGATGCCCCCCAGCGCCAGTGCCGTGGACTTCTTCCAGCTCTTTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391860.7
CDS CCA 72 bp CCGTGCGTGGTCTGGCTGGAGCGGAAGGCCACGACGTaGAAGTACTTGAGGATCTTCTCGAAGCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PCVVWLERKATT*KYLRIFSKRAW
Trigger: CCAGGCCCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCGTGGCCTTCCGCTCCAGCCAGACCACGCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 90 bp TTCATCTTGATTTGGTACTGGCCCCGGGCCGGGGGTGTGGCTGGGTaGGTCAGCATGGACAGTGGGAGGCCGGTGCAGTCACTCTTCCGC +
Preference number: 6 (lower is better)
Translates to: FILIWYWPRAGGVAG*VSMDSGRPVQSLFR
Trigger: GCGGAAGAGTGACTGCACCGGCCTCCCACTGTCCATGCTGACCAACCCAGCCACACCCCCGGCCCGGGGCCAGTACCAAATCAAGATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391860.7
ENST00000525115.1
ENST00000530424.1
CDS TCA 72 bp GGCTGCGGTTGCTGTAGAAGCCTCCGCTCCAGATGCTaGGGACGGACTCGCAGTGGGAGATGCTGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: GCGCCRSLRSRC*GRTRSGRCWWR
Trigger: TCTCCACCAGCATCTCCCACTGCGAGTCCGTCCTCAGCATCTGGAGCGGAGGCTTCTACAGCAACCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS TCA 72 bp AATCGCTTGGCTGCAGATCCCGGCCGGGCACTATGCTaGGCAACTGCAGCTCAGGTCCTGCAGAGTCCCCGA +
Preference number: 6 (lower is better)
Translates to: NRLAADPGRALC*ATAAQVLQSPR
Trigger: TCGGGGACTCTGCAGGACCTGAGCTGCAGTTGCTCAGCATAGTGCCCGGCCGGGATCTGCAGCCAAGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS GCA 72 bp GGCTGCAGATCCCGGCCGGGCACTATGCTGAGCAACTaGAGCTCAGGTCCTGCAGAGTCCCCGAGAGTACTT +
Preference number: 6 (lower is better)
Translates to: GCRSRPGTMLSN*SSGPAESPRVL
Trigger: AAGTACTCTCGGGGACTCTGCAGGACCTGAGCTGCAGTTGCTCAGCATAGTGCCCGGCCGGGATCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS CCA 72 bp TTCCGGCACAGGCTCCTGGCCACCATGCTGTGGAGCTaGGGCTTATTCTTCAGCGCATCCAGGCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: FRHRLLATMLWS*GLFFSASRPSG
Trigger: CCCAGATGGCCTGGATGCGCTGAAGAATAAGCCCCAGCTCCACAGCATGGTGGCCAGGAGCCTGTGCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS GCA 72 bp GATGCTGGGCCCCGTGAAAATGATGTAGTTCTTGCCTaGCGCGTTCCGGCACAGGCTCCTGGCCACCATGCT +
Preference number: 6 (lower is better)
Translates to: DAGPRENDVVLA*RVPAQAPGHHA
Trigger: AGCATGGTGGCCAGGAGCCTGTGCCGGAACGCGGCAGGCAAGAACTACATCATTTTCACGGGGCCCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 72 bp GTCTGGCTGGAGCGGAAGGCCACGACGTGGAAGTACTaGAGGATCTTCTCGAAGCGGGCCTGGCTCATGACG +
Preference number: 6 (lower is better)
Translates to: VWLERKATTWKY*RIFSKRAWLMT
Trigger: CGTCATGAGCCAGGCCCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCGTGGCCTTCCGCTCCAGCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CCA 72 bp TGTAGTTCTTGCCTGCCGCGTTCCGGCACAGGCTCCTaGCCACCATGCTGTGGAGCTGGGGCTTATTCTTCA +
Preference number: 6 (lower is better)
Translates to: CSSCLPRSGTGS*PPCCGAGAYSS
Trigger: TGAAGAATAAGCCCCAGCTCCACAGCATGGTGGCCAGGAGCCTGTGCCGGAACGCGGCAGGCAAGAACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS GCA 72 bp ATCTTTCGGGTGGGACCTGTGAATGAATCGCTTGGCTaGAGATCCCGGCCGGGCACTATGCTGAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: IFRVGPVNESLG*RSRPGTMLSNC
Trigger: GCAGTTGCTCAGCATAGTGCCCGGCCGGGATCTGCAGCCAAGCGATTCATTCACAGGTCCCACCCGAAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS TCA 72 bp TCAGGGGTTCATGTAGCACCTGGGTTTGGGAAGGCCTaGAGGCAGAGTCGAAGCTGTTCTGCAGGGAGTCGA +
Preference number: 6 (lower is better)
Translates to: SGVHVAPGFGKA*RQSRSCSAGSR
Trigger: TCGACTCCCTGCAGAACAGCTTCGACTCTGCCTTCAGGCCTTCCCAAACCCAGGTGCTACATGAACCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CCA 72 bp GAGCTGGGGCTTATTCTTCAGCGCATCCAGGCCATCTaGGCCCCCACCTTCCTTCAGGTGGACATAAATCTG +
Preference number: 6 (lower is better)
Translates to: ELGLILQRIQAI*APTFLQVDINL
Trigger: CAGATTTATGTCCACCTGAAGGAAGGTGGGGGCCCAGATGGCCTGGATGCGCTGAAGAATAAGCCCCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 72 bp CTGCAGCTCAGGTCCTGCAGAGTCCCCGAGAGTACTTaGCACGAAGAGAGCTCGAGTTCTGTAGTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: LQLRSCRVPEST*HEESSSSVVRH
Trigger: ATGCCTGACTACAGAACTCGAGCTCTCTTCGTGCAAAGTACTCTCGGGGACTCTGCAGGACCTGAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525115.1
CDS TCA 72 bp CTGCGCCCGGCTGTACCTCTTCACGTGGTAGGCGTCTaGCATTTTGTACAGGATGTAGGCATTGTTGATGGC +
Preference number: 6 (lower is better)
Translates to: LRPAVPLHVVGV*HFVQDVGIVDG
Trigger: GCCATCAACAATGCCTACATCCTGTACAAAATGTCAGACGCCTACCACGTGAAGAGGTACAGCCGGGCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 72 bp CAGGCTCCGTCGCTCCCAAACCGCTCCTGGAACTTCTaGGCATACATGTTTGTCTGCACCACCATGTTCTTG +
Preference number: 6 (lower is better)
Translates to: QAPSLPNRSWNF*AYMFVCTTMFL
Trigger: CAAGAACATGGTGGTGCAGACAAACATGTATGCCAAGAAGTTCCAGGAGCGGTTTGGGAGCGACGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS TCA 72 bp TCCTCTTTCGCAGCTCCCGCTCTGTGCACGTGGCAATaGATACAGGATCCTCATCGATCAGGGGTTCATGTA +
Preference number: 6 (lower is better)
Translates to: SSFAAPALCTWQ*IQDPHRSGVHV
Trigger: TACATGAACCCCTGATCGATGAGGATCCTGTATTCATTGCCACGTGCACAGAGCGGGAGCTGCGAAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 90 bp TCCTGGAACTTCTTGGCATACATGTTTGTCTGCACCACCATGTTCTaGAGGACGTTGTCTGGGACAAAGAGCTGGAAGAAGTCCACGGCA +
Preference number: 6 (lower is better)
Translates to: SWNFLAYMFVCTTMF*RTLSGTKSWKKSTA
Trigger: TGCCGTGGACTTCTTCCAGCTCTTTGTCCCAGACAACGTCCTCAAGAACATGGTGGTGCAGACAAACATGTATGCCAAGAAGTTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS GCA 72 bp AACCGCTCCTGGAACTTCTTGGCATACATGTTTGTCTaGACCACCATGTTCTTGAGGACGTTGTCTGGGACA +
Preference number: 6 (lower is better)
Translates to: NRSWNFLAYMFV*TTMFLRTLSGT
Trigger: TGTCCCAGACAACGTCCTCAAGAACATGGTGGTGCAGACAAACATGTATGCCAAGAAGTTCCAGGAGCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 72 bp AGCAGCTGGGTACTGTGCTTCAGGGCCAATTTTCTCTaGCTTTACTTTCACAGCCCCACTTCATGTCGTCGA +
Preference number: 6 (lower is better)
Translates to: SSWVLCFRANFL*LYFHSPTSCRR
Trigger: TCGACGACATGAAGTGGGGCTGTGAAAGTAAAGCAAGAGAAAATTGGCCCTGAAGCACAGTACCCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530424.1
CDS CAA 90 bp CTTCAGGTGGACATAAATCTGGATGATGAAGCCAGTGGAAGAACATaGTCTGACCCAGAGGCTGAATTTCCGCTTTTTCCTCTTTCGCAG +
Preference number: 6 (lower is better)
Translates to: LQVDINLDDEASGRT*SDPEAEFPLFPLSQ
Trigger: CTGCGAAAGAGGAAAAAGCGGAAATTCAGCCTCTGGGTCAGACAATGTTCTTCCACTGGCTTCATCATCCAGATTTATGTCCACCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 90 bp TTCTTCCAAAGCAGCTGGGTACTGTGCTTCAGGGCCAATTTTCTCTaGCTTTACTTTCACAGCCCCACTTCATGTCGTCGAATCTCTCTA +
Preference number: 6 (lower is better)
Translates to: FFQSSWVLCFRANFL*LYFHSPTSCRRISL
Trigger: TAGAGAGATTCGACGACATGAAGTGGGGCTGTGAAAGTAAAGCAAGAGAAAATTGGCCCTGAAGCACAGTACCCAGCTGCTTTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530424.1
CDS CAA 72 bp TTCTTGGCATACATGTTTGTCTGCACCACCATGTTCTaGAGGACGTTGTCTGGGACAAAGAGCTGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: FLAYMFVCTTMF*RTLSGTKSWKK
Trigger: CTTCTTCCAGCTCTTTGTCCCAGACAACGTCCTCAAGAACATGGTGGTGCAGACAAACATGTATGCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1
CDS CAA 72 bp GACATAAATCTGGATGATGAAGCCAGTGGAAGAACATaGTCTGACCCAGAGGCTGAATTTCCGCTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: DINLDDEASGRT*SDPEAEFPLFP
Trigger: AGGAAAAAGCGGAAATTCAGCCTCTGGGTCAGACAATGTTCTTCCACTGGCTTCATCATCCAGATTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391860.7
ENST00000525115.1