Pregenerated sensors for PGBD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000137338Ensembl transcript IDs: ENST00000259883.3, ENST00000682144.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTAGCTGACCTCGTGAAAGGCTCCCGAGGGAGCTCAGAGGCCCGGTaGTCCCCTGTCGGGAGCGCCGGTTTCCCCAGAGCCCGGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VADLVKGSRGSSEAR*SPVGSAGFPRARAA Trigger: AGCGGCCCGGGCTCTGGGGAAACCGGCGCTCCCGACAGGGGAGCACCGGGCCTCTGAGCTCCCTCGGGAGCCTTTCACGAGGTCAGCTAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 90 bp | GCTGATCCGTGGGGAACAGGCCCACTCACTTCTTGGGGGTTCCCTTaGGGACGCTGTGGAGGTTCACACTTCAGGGTGGTTATCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ADPWGTGPLTSWGFP*GRCGGSHFRVVIPG Trigger: GCCTGGGATAACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGAACCCCCAAGAAGTGAGTGGGCCTGTTCCCCACGGATCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 90 bp | GGGAACAGGCCCACTCACTTCTTGGGGGTTCCCTTGAGGACGCTGTaGAGGTTCACACTTCAGGGTGGTTATCCCAGGCAGGAGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNRPTHFLGVPLRTL*RFTLQGGYPRQELE Trigger: CTCCAGCTCCTGCCTGGGATAACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGAACCCCCAAGAAGTGAGTGGGCCTGTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 90 bp | TGCCAGCAGCCAGCACCCTCAGGCGCGCCCCTGAATGTATTTTTCTaGGATTACACCCAGCATCTAGCACCGCGCCAGGCACTGAATACC | + |
|
Preference number: 5 (lower is better) Translates to: CQQPAPSGAPLNVFF*DYTQHLAPRQALNT Trigger: GGTATTCAGTGCCTGGCGCGGTGCTAGATGCTGGGTGTAATCTCAGAAAAATACATTCAGGGGCGCGCCTGAGGGTGCTGGCTGCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS GCA 90 bp | GCAGGCGGCAAATCTCCTGAGTGTGGGAGCTGCCCTCCTGTGAGTTaGACACCTGCTCCCAGGTGGGATCTTCCTCCTTCACTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: AGGKSPECGSCPPVS*TPAPRWDLPPSLSQ Trigger: TTGTGAAAGTGAAGGAGGAAGATCCCACCTGGGAGCAGGTGTGCAACTCACAGGAGGGCAGCTCCCACACTCAGGAGATTTGCCGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 90 bp | GTTAATGGACCAAAAGTTCAGGAACGCGCACAACAAAGACGTAGCTaGCCTCGTGAAAGGCTCCCGAGGGAGCTCAGAGGCCCGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNGPKVQERAQQRRS*PRERLPRELRGPVL Trigger: GAGCACCGGGCCTCTGAGCTCCCTCGGGAGCCTTTCACGAGGTCAGCTACGTCTTTGTTGTGCGCGTTCCTGAACTTTTGGTCCATTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 90 bp | CTCCGAGTCAGACTCAGATGTGACCACTTCTCTGCAGCAACGGCCTaGGCTGTTTCTTCCTCAGTCTTCACCAATGTCTGGGACCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LRVRLRCDHFSAATA*AVSSSVFTNVWDLT Trigger: AGTCAGGTCCCAGACATTGGTGAAGACTGAGGAAGAAACAGCCCAGGCCGTTGCTGCAGAGAAGTGGTCACATCTGAGTCTGACTCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 90 bp | TTTTCTCCCTTTTCGGGTAATGTCTCCTGCAGCATATTCCAGGGATaGGATGTGCATGCGGGCCCACAAATCACCTGGGTGACGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSPFSGNVSCSIFQG*DVHAGPQITWVTVL Trigger: AAGGACCGTCACCCAGGTGATTTGTGGGCCCGCATGCACATCTCATCCCTGGAATATGCTGCAGGAGACATTACCCGAAAAGGGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS GCA 90 bp | CAGGAGCTGGAGGCTCTGACACTCCAAAGAGACTCCTTGATATTCTaGCACCATTGGGTGCATGTCCTGTCCCTGAATATAGACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QELEALTLQRDSLIF*HHWVHVLSLNIDRG Trigger: GCCTCTGTCTATATTCAGGGACAGGACATGCACCCAATGGTGGCAGAATATCAAGGAGTCTCTTTGGAGTGTCAGAGCCTCCAGCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 90 bp | TATTCCAGGGATGAGATGTGCATGCGGGCCCACAAATCACCTGGGTaGCGGTCCTTCAGAGTGTTCAAATGTGCAACTGTCCTTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YSRDEMCMRAHKSPG*RSFRVFKCATVLSV Trigger: TACTGAAAGGACAGTTGCACATTTGAACACTCTGAAGGACCGTCACCCAGGTGATTTGTGGGCCCGCATGCACATCTCATCCCTGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 90 bp | CATCTAGCACCGCGCCAGGCACTGAATACCGGCGTGTCTAATTGTTaGTTAATGGACCAAAAGTTCAGGAACGCGCACAACAAAGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLAPRQALNTGVSNC*LMDQKFRNAHNKDV Trigger: TACGTCTTTGTTGTGCGCGTTCCTGAACTTTTGGTCCATTAACCAACAATTAGACACGCCGGTATTCAGTGCCTGGCGCGGTGCTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 90 bp | GTTACAATTTCTTCAGTCATCGGACTGAGGCTCATAACTGTCTCCTaGGCTGAGTTCCCACAGAGGTTCCTCCGAGTCAGACTCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VTISSVIGLRLITVS*AEFPQRFLRVRLRC Trigger: ACATCTGAGTCTGACTCGGAGGAACCTCTGTGGGAACTCAGCTCAGGAGACAGTTATGAGCCTCAGTCCGATGACTGAAGAAATTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS GCA 90 bp | GGCCCACAAATCACCTGGGTGACGGTCCTTCAGAGTGTTCAAATGTaGAACTGTCCTTTCAGTAGCAATAGGAGTACTACAAGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPQITWVTVLQSVQM*NCPFSSNRSTTRNL Trigger: CAGATTCCTTGTAGTACTCCTATTGCTACTGAAAGGACAGTTGCACATTTGAACACTCTGAAGGACCGTCACCCAGGTGATTTGTGGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 90 bp | TTTAGCTACACCTTCCTTGCATTCATCATACACTTTTACTATGGATaGTTGACTTATCTGAGGGATTTCTTCGTTATCAGCATCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: FSYTFLAFIIHFYYG*LTYLRDFFVISITT Trigger: TGTTGTGATGCTGATAACGAAGAAATCCCTCAGATAAGTCAACCATCCATAGTAAAAGTGTATGATGAATGCAAGGAAGGTGTAGCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS GCA 72 bp | CTCGTGAAAGGCTCCCGAGGGAGCTCAGAGGCCCGGTaGTCCCCTGTCGGGAGCGCCGGTTTCCCCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVKGSRGSSEAR*SPVGSAGFPRA Trigger: GGCTCTGGGGAAACCGGCGCTCCCGACAGGGGAGCACCGGGCCTCTGAGCTCCCTCGGGAGCCTTTCACGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 72 bp | GTGGGGAACAGGCCCACTCACTTCTTGGGGGTTCCCTaGAGGACGCTGTGGAGGTTCACACTTCAGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGNRPTHFLGVP*RTLWRFTLQGG Trigger: ACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGAACCCCCAAGAAGTGAGTGGGCCTGTTCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | CCAGCACCCTCAGGCGCGCCCCTGAATGTATTTTTCTaGGATTACACCCAGCATCTAGCACCGCGCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAPSGAPLNVFF*DYTQHLAPRQA Trigger: TGCCTGGCGCGGTGCTAGATGCTGGGTGTAATCTCAGAAAAATACATTCAGGGGCGCGCCTGAGGGTGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | TGGGGAACAGGCCCACTCACTTCTTGGGGGTTCCCTTaGGGACGCTGTGGAGGTTCACACTTCAGGGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WGTGPLTSWGFP*GRCGGSHFRVV Trigger: AACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGAACCCCCAAGAAGTGAGTGGGCCTGTTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 72 bp | TCCCTTGAGGACGCTGTGGAGGTTCACACTTCAGGGTaGTTATCCCAGGCAGGAGCTGGAGGCTCTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: SLEDAVEVHTSG*LSQAGAGGSDT Trigger: AGTGTCAGAGCCTCCAGCTCCTGCCTGGGATAACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 72 bp | CCCACTCACTTCTTGGGGGTTCCCTTGAGGACGCTGTaGAGGTTCACACTTCAGGGTGGTTATCCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTHFLGVPLRTL*RFTLQGGYPRQ Trigger: CTGCCTGGGATAACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGAACCCCCAAGAAGTGAGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | CCAAAAGTTCAGGAACGCGCACAACAAAGACGTAGCTaGCCTCGTGAAAGGCTCCCGAGGGAGCTCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PKVQERAQQRRS*PRERLPRELRG Trigger: GCCTCTGAGCTCCCTCGGGAGCCTTTCACGAGGTCAGCTACGTCTTTGTTGTGCGCGTTCCTGAACTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | GTTCCCACAGAGGTTCCTCCGAGTCAGACTCAGATGTaGCCACTTCTCTGCAGCAACGGCCTGGGCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VPTEVPPSQTQM*PLLCSNGLGCF Trigger: GAAACAGCCCAGGCCGTTGCTGCAGAGAAGTGGTCACATCTGAGTCTGACTCGGAGGAACCTCTGTGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS GCA 72 bp | TGTCTCCTGCAGCATATTCCAGGGATGAGATGTGCATaGGGGCCCACAAATCACCTGGGTGACGGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLLQHIPGMRCA*GPTNHLGDGPS Trigger: TGAAGGACCGTCACCCAGGTGATTTGTGGGCCCGCATGCACATCTCATCCCTGGAATATGCTGCAGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | AGTCATCGGACTGAGGCTCATAACTGTCTCCTGAGCTaGGTTCCCACAGAGGTTCCTCCGAGTCAGACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHRTEAHNCLLS*VPTEVPPSQTQ Trigger: CTGAGTCTGACTCGGAGGAACCTCTGTGGGAACTCAGCTCAGGAGACAGTTATGAGCCTCAGTCCGATGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 72 bp | CAGGAGCTGGAGGCTCTGACACTCCAAAGAGACTCCTaGATATTCTGCCACCATTGGGTGCATGTCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QELEALTLQRDS*IFCHHWVHVLS Trigger: GGACAGGACATGCACCCAATGGTGGCAGAATATCAAGGAGTCTCTTTGGAGTGTCAGAGCCTCCAGCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | TCTTCAGTCATCGGACTGAGGCTCATAACTGTCTCCTaGGCTGAGTTCCCACAGAGGTTCCTCCGAGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSVIGLRLITVS*AEFPQRFLRVR Trigger: TCTGACTCGGAGGAACCTCTGTGGGAACTCAGCTCAGGAGACAGTTATGAGCCTCAGTCCGATGACTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | GATGAGATGTGCATGCGGGCCCACAAATCACCTGGGTaGCGGTCCTTCAGAGTGTTCAAATGTGCAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DEMCMRAHKSPG*RSFRVFKCATV Trigger: GACAGTTGCACATTTGAACACTCTGAAGGACCGTCACCCAGGTGATTTGTGGGCCCGCATGCACATCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | TTTTCGGGTAATGTCTCCTGCAGCATATTCCAGGGATaGGATGTGCATGCGGGCCCACAAATCACCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSGNVSCSIFQG*DVHAGPQITWV Trigger: CACCCAGGTGATTTGTGGGCCCGCATGCACATCTCATCCCTGGAATATGCTGCAGGAGACATTACCCGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 72 bp | CCGCGCCAGGCACTGAATACCGGCGTGTCTAATTGTTaGTTAATGGACCAAAAGTTCAGGAACGCGCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRQALNTGVSNC*LMDQKFRNAHN Trigger: GTTGTGCGCGTTCCTGAACTTTTGGTCCATTAACCAACAATTAGACACGCCGGTATTCAGTGCCTGGCGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 72 bp | AGACTCAGATGTGACCACTTCTCTGCAGCAACGGCCTaGGCTGTTTCTTCCTCAGTCTTCACCAATGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRCDHFSAATA*AVSSSVFTNVW Trigger: CCAGACATTGGTGAAGACTGAGGAAGAAACAGCCCAGGCCGTTGCTGCAGAGAAGTGGTCACATCTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 90 bp | GGAGGCTCTGACACTCCAAAGAGACTCCTTGATATTCTGCCACCATaGGGTGCATGTCCTGTCCCTGAATATAGACAGAGGCCTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGSDTPKRLLDILPP*GACPVPEYRQRPVV Trigger: GACAACAGGCCTCTGTCTATATTCAGGGACAGGACATGCACCCAATGGTGGCAGAATATCAAGGAGTCTCTTTGGAGTGTCAGAGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS GCA 72 bp | GAGGCTCTGACACTCCAAAGAGACTCCTTGATATTCTaGCACCATTGGGTGCATGTCCTGTCCCTGAATATA | + |
|
Preference number: 6 (lower is better) Translates to: EALTLQRDSLIF*HHWVHVLSLNI Trigger: TATATTCAGGGACAGGACATGCACCCAATGGTGGCAGAATATCAAGGAGTCTCTTTGGAGTGTCAGAGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 72 bp | TTTTCAGGAGCAGGGCCTGGCAAAGCTTCATACATGTaGAGCTTAGAGGCTAAAGCTTCACTTAGCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSGAGPGKASYM*SLEAKASLSLG Trigger: CCCCAAGCTAAGTGAAGCTTTAGCCTCTAAGCTCAACATGTATGAAGCTTTGCCAGGCCCTGCTCCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 72 bp | GACACTCCAAAGAGACTCCTTGATATTCTGCCACCATaGGGTGCATGTCCTGTCCCTGAATATAGACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DTPKRLLDILPP*GACPVPEYRQR Trigger: CCTCTGTCTATATTCAGGGACAGGACATGCACCCAATGGTGGCAGAATATCAAGGAGTCTCTTTGGAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 90 bp | CCATCTTCATTTTCAGGAGCAGGGCCTGGCAAAGCTTCATACATGTaGAGCTTAGAGGCTAAAGCTTCACTTAGCTTGGGGTCTGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: PSSFSGAGPGKASYM*SLEAKASLSLGSGI Trigger: AATACCAGACCCCAAGCTAAGTGAAGCTTTAGCCTCTAAGCTCAACATGTATGAAGCTTTGCCAGGCCCTGCTCCTGAAAATGAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000682144.1 |
||
| CDS CAA 90 bp | CCATCTTCATTTTCAGGAGCAGGGCCTGGCAAAGCTTCATACATGTaGAGCTTAGAGGCTAAAGCTTCACTTAGCTTGGGGTCTATATTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSFSGAGPGKASYM*SLEAKASLSLGSIF Trigger: GAATATAGACCCCAAGCTAAGTGAAGCTTTAGCCTCTAAGCTCAACATGTATGAAGCTTTGCCAGGCCCTGCTCCTGAAAATGAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259883.3 |
||
| CDS GCA 72 bp | ATCACCTGGGTGACGGTCCTTCAGAGTGTTCAAATGTaGAACTGTCCTTTCAGTAGCAATAGGAGTACTACA | + |
|
Preference number: 6 (lower is better) Translates to: ITWVTVLQSVQM*NCPFSSNRSTT Trigger: TGTAGTACTCCTATTGCTACTGAAAGGACAGTTGCACATTTGAACACTCTGAAGGACCGTCACCCAGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CCA 72 bp | GGTTACAGGCTCTGTGTAGTTGCCATGCATTGTTCATaGCTACATCAATCATGTAGCTCACCAAAATTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GYRLCVVAMHCS*LHQSCSSPKLS Trigger: ACTCAATTTTGGTGAGCTACATGATTGATGTAGCCATGAACAATGCATGGCAACTACACAGAGCCTGTAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | TGTTCCTGTTGCCCTCACCCCCTTCTTTTTCAAGGCTaGCAACAATTTGACACTTGTAAAGAAGCTATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CSCCPHPLLFQG*QQFDTCKEAIK Trigger: TTTGATAGCTTCTTTACAAGTGTCAAATTGTTGTCAGCCTTGAAAAAGAAGGGGGTGAGGGCAACAGGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | TTCGCTCTTGAGATTCAAAAGTCCAGAATCCAGTGCTaGCCAGCTTGGAAAATTGGGTTTAATGTCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FALEIQKSRIQC*PAWKIGFNVSF Trigger: AAAAGAGACATTAAACCCAATTTTCCAAGCTGGTCAGCACTGGATTCTGGACTTTTGAATCTCAAGAGCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS TCA 72 bp | ATATTCAGAAATAGAGATCTGGTATTCAAGAAATACTaGTGGGCTTCTTCACGAATGCACGTAAAGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: IFRNRDLVFKKY*WASSRMHVKHL Trigger: CAGGTGCTTTACGTGCATTCGTGAAGAAGCCCATCAGTATTTCTTGAATACCAGATCTCTATTTCTGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259883.3 |
||
| CDS CCA 72 bp | ACCTTCCTTGCATTCATCATACACTTTTACTATGGATaGTTGACTTATCTGAGGGATTTCTTCGTTATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TFLAFIIHFYYG*LTYLRDFFVIS Trigger: GCTGATAACGAAGAAATCCCTCAGATAAGTCAACCATCCATAGTAAAAGTGTATGATGAATGCAAGGAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 72 bp | TACATGTTGAGCTTAGAGGCTAAAGCTTCACTTAGCTaGGGGTCTATATTCAGAAATAGAGATCTGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: YMLSLEAKASLS*GSIFRNRDLVF Trigger: GAATACCAGATCTCTATTTCTGAATATAGACCCCAAGCTAAGTGAAGCTTTAGCCTCTAAGCTCAACATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259883.3 |
||
| CDS CCA 72 bp | CTACACCTTCCTTGCATTCATCATACACTTTTACTATaGATGGTTGACTTATCTGAGGGATTTCTTCGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LHLPCIHHTLLL*MVDLSEGFLRY Trigger: ATAACGAAGAAATCCCTCAGATAAGTCAACCATCCATAGTAAAAGTGTATGATGAATGCAAGGAAGGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||
| CDS CAA 90 bp | GTACCATTTCTTGCTTCTTATCCTCACCCTGTATTTCGAAATAATTaGATCCATTTTAGCTACACCTTCCTTGCATTCATCATACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: VPFLASYPHPVFRNN*IHFSYTFLAFIIHF Trigger: AAAGTGTATGATGAATGCAAGGAAGGTGTAGCTAAAATGGATCAAATTATTTCGAAATACAGGGTGAGGATAAGAAGCAAGAAATGGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259883.3 ENST00000682144.1 |
||