RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGAP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000129925

Ensembl transcript IDs: ENST00000250930.7, ENST00000424078.5, ENST00000427313.5, ENST00000431232.7, ENST00000448854.1, ENST00000467452.1, ENST00000475348.1, ENST00000476735.1

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGGAGCAGGGGTCTCGGAGTCCACAGCTCCCGGCCCCAGTGGTaGGCTCAGGGCTCCTGGGCGCCATGGGTCTCACCACAGCCTCGC +
Preference number: 1 (lower is better)
Translates to: ARSRGLGVHSSRPQW*AQGSWAPWVSPQPR
Trigger: GCGAGGCTGTGGTGAGACCCATGGCGCCCAGGAGCCCTGAGCCCACCACTGGGGCCGGGAGCTGTGGACTCCGAGACCCCTGCTCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR GCA 90 bp TCTCCCGTCCCTATGGTGACCACAGCAGCAGAGGGGGATCCTCCATaGCCCAGGCAGGCTGGCATCAGGGCCACACAGGGGCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: SPVPMVTTAAEGDPP*PRQAGIRATQGPGA
Trigger: TGCTCCTGGCCCCTGTGTGGCCCTGATGCCAGCCTGCCTGGGGCATGGAGGATCCCCCTCTGCTGCTGTGGTCACCATAGGGACGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR GCA 90 bp CCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCCAGGTaGTGCTCCTGGTCATTGCTTCCCCCACAAGGTTTGCATGAGGAG +
Preference number: 1 (lower is better)
Translates to: PGRIRDTHRPQGGAR*CSWSLLPPQGLHEE
Trigger: CTCCTCATGCAAACCTTGTGGGGGAAGCAATGACCAGGAGCAGCACCTGGCCCCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR GCA 90 bp TCAGGCCCAGGCCTCAGGGACACAGCCATGCTGGGCCTCTGTGGGTaGCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGC +
Preference number: 1 (lower is better)
Translates to: SGPGLRDTAMLGLCG*HGNPQQIWAFTGWS
Trigger: GCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCACCCACAGAGGCCCAGCATGGCTGTGTCCCTGAGGCCTGGGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
3UTR CCA 90 bp CCCAGGCCTCAGGGACACAGCCATGCTGGGCCTCTGTGGGTGCCATaGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGAC +
Preference number: 1 (lower is better)
Translates to: PRPQGHSHAGPLWVP*QPPADMGIHWLEQD
Trigger: GTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCACCCACAGAGGCCCAGCATGGCTGTGTCCCTGAGGCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
3UTR CCA 90 bp GTCCTCAGGCCCAGGCCTCAGGGACACAGCCATGCTGGGCCTCTGTaGGTGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTG +
Preference number: 1 (lower is better)
Translates to: VLRPRPQGHSHAGPL*VPWQPPADMGIHWL
Trigger: CAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCACCCACAGAGGCCCAGCATGGCTGTGTCCCTGAGGCCTGGGCCTGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
3UTR-3UTR CCA 90 bp GGGCCAGGAGCAGGGGTCTCGGAGTCCACAGCTCCCGGCCCCAGTGGTGGGCTCTCGCACAGGCACCTGTaGTCTCCAAGTAACCAAGCC +
Preference number: 2 (lower is better)
Translates to: GPGAGVSESTAPGPSGGLSHRHL*SPSNQA
Trigger: GGCTTGGTTACTTGGAGACCACAGGTGCCTGTGCGA...GAGCCCACCACTGGGGCCGGGAGCTGTGGACTCCGAGACCCCTGCTCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR-3UTR CCA 90 bp GGACAGGGCTGGGTAGGGGTTCCTTCTGGGCCAAACCCCCAGAGCAGCAGAGCACAGCGAGCAGGCAGCTaGCGAGGAGAGGTGCGTGTG +
Preference number: 2 (lower is better)
Translates to: GQGWVGVPSGPNPQSSRAQRAGS*RGEVRV
Trigger: CACACGCACCTCTCCTCGCCAGCTGCCTGCTCGCTG...TGCTCTGCTGCTCTGGGGGTTTGGCCCAGAAGGAACCCCTACCCAGCCCTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR-3UTR CCA 90 bp GGGCCAGGAGCAGGGGTCTCGGAGTCCACAGCTCCCGGCCCCAGTGGTGGGCTCGCCAATTTATTCAGCTaGAAATCAATCTGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GPGAGVSESTAPGPSGGLANLFS*KSICPG
Trigger: CCCTGGACAGATTGATTTCCAGCTGAATAAATTGGC...GAGCCCACCACTGGGGCCGGGAGCTGTGGACTCCGAGACCCCTGCTCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR-3UTR CCA 90 bp CCTTCAGGAAGGCCATATCCCGGACAAGACCCAGAAGGGAAGCCCCCAGAGCCAAGTGCCCATCAGCTCTaGGGGAAACCTCCGTCTCCC +
Preference number: 2 (lower is better)
Translates to: PSGRPYPGQDPEGKPPEPSAHQL*GKPPSP
Trigger: GGGAGACGGAGGTTTCCCCCAGAGCTGATGGGCACT...TGGCTCTGGGGGCTTCCCTTCTGGGTCTTGTCCGGGATATGGCCTTCCTGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR CAA 90 bp GGAGGGGCCAGGTGCTGCTCCTGGTCATTGCTTCCCCCACAAGGTTaGCATGAGGAGCAGAGACAGTCCAGTCTCCTGAACACCCACAGG +
Preference number: 2 (lower is better)
Translates to: GGARCCSWSLLPPQG*HEEQRQSSLLNTHR
Trigger: CCTGTGGGTGTTCAGGAGACTGGACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAAGCAATGACCAGGAGCAGCACCTGGCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR-3UTR GCA 90 bp TCATTGCTTCCCCCACAAGGTTTGCATGAGGAGCAGAGACAGTCCAGTCTCCTGGAGGGGGATCCTCCATaGCCCAGGCAGGCTGGCATC +
Preference number: 2 (lower is better)
Translates to: SLLPPQGLHEEQRQSSLLEGDPP*PRQAGI
Trigger: GATGCCAGCCTGCCTGGGGCATGGAGGATCCCCCTC...CAGGAGACTGGACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAAGCAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR-3UTR GCA 90 bp TCAGCCACTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGTTCCCCCACAAGGTTTaGATGAGGAGCAGAGACAGT +
Preference number: 2 (lower is better)
Translates to: SATHFSRADPRHSQASGRFPHKV*MRSRDS
Trigger: ACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAA...CCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAGTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR-3UTR TCA 90 bp GGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCGATACAGCTCCTGGCTaGAGAGGTCATCAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: GQFIQLEINLSRAGPGASDTAPG*RGHQSS
Trigger: GCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATC...GGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
3UTR CAA 90 bp AACCCCATATATATATGTTTCTCCTTTATAAGCTTAGAGATTGCTTaGGTGGTCAAGTGCAGGGCGGCTGGGGGAGGTAAGACCTTCAGG +
Preference number: 2 (lower is better)
Translates to: NPIYICFSFISLEIA*VVKCRAAGGGKTFR
Trigger: CCTGAAGGTCTTACCTCCCCCAGCCGCCCTGCACTTGACCACCAAAGCAATCTCTAAGCTTATAAAGGAGAAACATATATATATGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
3UTR TCA 72 bp TGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTaGAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: WTRRLPLDTAPG*RGHQSSSCPQA
Trigger: GGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
3UTR GCA 72 bp GGCCTCAGGGACACAGCCATGCTGGGCCTCTGTGGGTaGCATGGCAACCCCCAGCAGATATGGGCATTCACT +
Preference number: 3 (lower is better)
Translates to: GLRDTAMLGLCG*HGNPQQIWAFT
Trigger: AGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCACCCACAGAGGCCCAGCATGGCTGTGTCCCTGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp CTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGCAGGGCTCGGCGGGCTaGTCAGGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSRAGPGASPSIQLLAEEQGSAG*SGGGSS
Trigger: GCTGCTGCCGCCACCTGACCAGCCCGCCGAGCCCTG...CTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CGTCCCTATGGTGACCACAGCAGCAGAGGGGGATCCTCCATGCCCCAGGCAGGCCTCCTGCCCAGGTCCTaGTGGTCGGGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RPYGDHSSRGGSSMPQAGLLPRS*WSGLGD
Trigger: GTCCCCGAGCCCCGACCACCAGGACCTGGGCAGGAG...GCCTGCCTGGGGCATGGAGGATCCCCCTCTGCTGCTGTGGTCACCATAGGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp GGGATCTGCAGAGGGATCTCAGCAGCGAGCAGGCAGCTGGCGAGGAGAGGTGCGCCCGCAGGGAGATGGTaGGGGAACCCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GICRGISAASRQLARRGAPAGRW*GNPRCP
Trigger: TGGACAGCGGGGGTTCCCTCACCATCTCCCTGCGGG...CGCACCTCTCCTCGCCAGCTGCCTGCTCGCTGCTGAGATCCCTCTGCAGATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp CTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCCAGGCGGCAGCAGCAAGGCTaGGCTCCCGGCCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LTSPGRIRDTHRPQGGARRQQQG*APGQQD
Trigger: ATCCTGCTGGCCGGGAGCGCAGCCTTGCTGCTGCCG...CCTGGCCCCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCCAGGAGCGCTGCCACGAGGTaGGGTAGCACTGGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: LTSPGRIRDTHRPQGGARSAATR*GSTGAG
Trigger: ACCGGCGCCAGTGCTACCCCACCTCGTGGCAGCGCT...CCTGGCCCCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp TGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGGAAGAATCGCCGCACTaGGACGGCGATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPGLDQAPPPRYSSWLKREESPH*DGDGGQ
Trigger: CTGGCCCCCATCGCCGTCTCAGTGCGGCGATTCTTC...CCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp ATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGGGCTGCGGTCCACCCTaGCACTCCTGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ICPGLDQAPPPRYSSWLKGCGPP*HSCPGP
Trigger: AGGACCTGGGCAGGAGTGGCAGGGTGGACCGCAGCC...CTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CACAGGCACCTGTGGTCTCCAAGTAACCAAGCCCAGGCCCCAGGGGCCACTGCACCACCCACGCCAGCCTaGCTTGCAGCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HRHLWSPSNQAQAPGATAPPTPA*LAAAAG
Trigger: GCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGGGTGG...TGCAGTGGCCCCTGGGGCCTGGGCTTGGTTACTTGGAGACCACAGGTGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp TCAGCCACTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCGGGGCGGGAGCCTaGATCCCCAGTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: SATHFSRADPRHSQASGRGGAGA*IPSAHQ
Trigger: CTGATGGGCACTGGGGATGCAGGCTCCCGCCCCGCC...CCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAGTGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCAGCAGAAGGGGCTGGATaGTCACGCTCCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGLDQAPPPRYSSWLKRSAEGAG*SRSVAC
Trigger: GCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGC...TGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGCCCAGGTCCTGGTaGTCGGGGCTCGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QAPPPRYSSWLKRSSEQQLPRSW*SGLGDS
Trigger: GCTGTCCCCGAGCCCCGACCACCAGGACCTGGGCAG...CTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGCAGGGCTCGGCGGGCTaGTCAGGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RYSSWLKRSSEQQLSPGQQGSAG*SGGGSS
Trigger: GCTGCTGCCGCCACCTGACCAGCCCGCCGAGCCCTG...CTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp AATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCCCCGCAGGGAGATGGTaGGGGAACCCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: NQSVQGWTRRLPLDTAPGPAGRW*GNPRCP
Trigger: TGGACAGCGGGGGTTCCCTCACCATCTCCCTGCGGG...GCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp TGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGGCAGCGTGTCGTAGCTaGGGATGCACAGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: CPGLDQAPPPRYSSWLKRAACRS*GCTAPP
Trigger: AGGCGGTGCTGTGCATCCTCAGCTACGACACGCTGC...CCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp CTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCCATGCACAGGATGGTaGCCCAGATGGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LDQAPPPRYSSWLKRSSEPCTGW*PRWPPR
Trigger: CCGGGGCGGCCATCTGGGTCACCATCCTGTGCATGG...CTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CTCCTGGGCGCCATGGGTCTCACCACAGCCTCGCCAGGGAACAGGACCATAGGGCTCTCCCGGGAGACCTaGAGGAGCCAGCGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLGAMGLTTASPGNRTIGLSRET*RSQRRS
Trigger: GCTTCTACGCTGGCTCCTGCAGGTCTCCCGGGAGAG...CCCTATGGTCCTGTTCCCTGGCGAGGCTGTGGTGAGACCCATGGCGCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp CAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGGGCTGCGGTCCACCCTaGCACTCCTGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QAPPPRYSSWLKRSSEQQGCGPP*HSCPGP
Trigger: AGGACCTGGGCAGGAGTGGCAGGGTGGACCGCAGCC...CTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp GGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAAGTGTGGCCGCCCTCTaGTGGGCCACCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPGASPSIQLLAEEVIRASVAAL*WATVWA
Trigger: AGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACT...TGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp GCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGAGTGTGGCCGCCCTCTaGTGGGCCACCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: APPPRYSSWLKRSSEQQLSVAAL*WATVWA
Trigger: AGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACT...CAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp GACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCGGCAGCAGCAAGGCTaGGCTCCCGGCCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DQAPPPRYSSWLKRSSEQRQQQG*APGQQD
Trigger: ATCCTGCTGGCCGGGAGCGCAGCCTTGCTGCTGCCG...CTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGTCCCCGGGGGCCGGGTaGGAAACGTTGACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LDQAPPPRYSSWLKRSSESPGAG*ETLTEA
Trigger: TGCCTCCGTCAACGTTTCCCACCCGGCCCCCGGGGA...CTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCTCCTGCCCAGGTCCTaGTGGTCGGGGCTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGLLPRS*WSGLGD
Trigger: GTCCCCGAGCCCCGACCACCAGGACCTGGGCAGGAG...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGACCCTGTCCAGGGGCTaGAAGTGCACCGACACCACG +
Preference number: 4 (lower is better)
Translates to: CPGLDQAPPPRYSSWLKRTLSRG*KCTDTT
Trigger: CGTGGTGTCGGTGCACTTCCAGCCCCTGGACAGGGT...CCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp GGGATCTGCAGAGGGATCTCAGCAGCGAGCAGGCAGCTGGCGAGGAGAGGTGCGTGCTGGGCCACCGTCTaGGCTGTGCTGTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GICRGISAASRQLARRGACWATV*AVLLSV
Trigger: CACGGACAACAGCACAGCCCAGACGGTGGCCCAGCA...CGCACCTCTCCTCGCCAGCTGCCTGCTCGCTGCTGAGATCCCTCTGCAGATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGTGGCCGCCCTCTGCTaGGCCACCGTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPRYSSWLKRSSEQQLSPVAALC*ATVWAV
Trigger: CACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCAC...TGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp ATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGCTCTCAGCTGTCACTTaGAGCCACCGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ICPGLDQAPPPRYSSWLKLSAVT*SHRSQG
Trigger: GCCCTGGGACCGGTGGCTGCAAGTGACAGCTGAGAG...CTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CGTCCCTATGGTGACCACAGCAGCAGAGGGGGATCCTCCATGCCCCAGGCAGGCCACGCCAGCCTGCCTTaGAGCTGCAGCTGGCATACA +
Preference number: 4 (lower is better)
Translates to: RPYGDHSSRGGSSMPQAGHASLP*SCSWHT
Trigger: TGTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTG...GCCTGCCTGGGGCATGGAGGATCCCCCTCTGCTGCTGTGGTCACCATAGGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp GCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTAGTGTGGCCGCCCTCTaGTGGGCCACCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGNQSVQGWTRRLPLDTASVAAL*WATVWA
Trigger: AGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACT...AGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp GGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTCGGCAGCAGCAAGGCTaGGCTCCCGGCCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GNQSVQGWTRRLPLDTAPRQQQG*APGQQD
Trigger: ATCCTGCTGGCCGGGAGCGCAGCCTTGCTGCTGCCG...AGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp GGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGAGGGGGATCCTCCATaGCCCAGGCAGGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: GPGASPSIQLLAEEVIRAEGDPP*PRQAGI
Trigger: GATGCCAGCCTGCCTGGGGCATGGAGGATCCCCCTC...TGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCCAGGGGAAGCGGAAGAGCCTaGCACTGCCGTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTSPGRIRDTHRPQGGARGSGRA*HCRTSC
Trigger: ACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCC...CCTGGCCCCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp AAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGAGCGGCACCCCGACCTaGAAGGAGGGCTGTACCGCG +
Preference number: 4 (lower is better)
Translates to: KSICPGLDQAPPPRYSSWSGTPT*KEGCTA
Trigger: CGCGGTACAGCCCTCCTTCCAGGTCGGGGTGCCGCT...CCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGGATGGTCACGCTCCGTaGCCTGCAAGCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SICPGLDQAPPPRYSSWLDGHAP*PASCEG
Trigger: GCCCTCACAGCTTGCAGGCCACGGAGCGTGACCATC...CAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp GGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGAAGGGGCTGGATaGTCACGCTCCGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPGASPSIQLLAEEVIRAAEGAG*SRSVAC
Trigger: GCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGC...TGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACACTGCCCAGGTCCTGGTaGTCGGGGCTCGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SAGNQSVQGWTRRLPLDTLPRSW*SGLGDS
Trigger: GCTGTCCCCGAGCCCCGACCACCAGGACCTGGGCAG...TGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGTGGCCGCCCTCTGCTaGGCCACCGTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SAGNQSVQGWTRRLPLDTVAALC*ATVWAV
Trigger: CACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCAC...TGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp TGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGGTGGCCGCCCTCTGCTaGGCCACCGTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CHGNPQQIWAFTGWSRTRVAALC*ATVWAV
Trigger: CACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCAC...CCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCAGCGCTGCCACGAGGTaGGGTAGCACTGGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGSAATR*GSTGAG
Trigger: ACCGGCGCCAGTGCTACCCCACCTCGTGGCAGCGCT...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCGAGCAGGCAGCTaGCGAGGAGAGGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: LDQAPPPRYSSWLKRSSEQRAGS*RGEVRV
Trigger: CACACGCACCTCTCCTCGCCAGCTGCCTGCTCGCTG...CTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp TGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGAGTGCCCATCAGCTCTaGGGGAAACCTCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CPGLDQAPPPRYSSWLKRSAHQL*GKPPSP
Trigger: GGGAGACGGAGGTTTCCCCCAGAGCTGATGGGCACT...CCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp ATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGGCACGTCCGGCTCCATaGTGGAAATCTCGACCACCC +
Preference number: 4 (lower is better)
Translates to: ICPGLDQAPPPRYSSWLKARPAP*WKSRPP
Trigger: GGGTGGTCGAGATTTCCATCATGGAGCCGGACGTGC...CTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp CGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGGAAGAATCGCCGCACTaGGACGGCGATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RYSSWLKRSSEQQLSPGQEESPH*DGDGGQ
Trigger: CTGGCCCCCATCGCCGTCTCAGTGCGGCGATTCTTC...CTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp GCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTGAAGAATCGCCGCACTaGGACGGCGATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGNQSVQGWTRRLPLDTAEESPH*DGDGGQ
Trigger: CTGGCCCCCATCGCCGTCTCAGTGCGGCGATTCTTC...AGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp GACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGGCAGCGTGTCGTAGCTaGGGATGCACAGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: DQAPPPRYSSWLKRSSEQAACRS*GCTAPP
Trigger: AGGCGGTGCTGTGCATCCTCAGCTACGACACGCTGC...CTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp GGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTGCCATGCACAGGATGGTaGCCCAGATGGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GNPQQIWAFTGWSRTRNVPCTGW*PRWPPR
Trigger: CCGGGGCGGCCATCTGGGTCACCATCCTGTGCATGG...CACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp GACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCTCTCAGCTGTCACTTaGAGCCACCGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DQAPPPRYSSWLKRSSEQLSAVT*SHRSQG
Trigger: GCCCTGGGACCGGTGGCTGCAAGTGACAGCTGAGAG...CTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGAACCCCCGCTGTCCATaGCGGTGTTCAGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QLEINLSRAGPGASPSIQNPRCP*RCSGAA
Trigger: GGCTGCGCCTGAACACCGGCATGGACAGCGGGGGTT...CTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAAACCCCCGCTGTCCATaGCGGTGTTCAGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPRYSSWLKRSSEQQLSPNPRCP*RCSGAA
Trigger: GGCTGCGCCTGAACACCGGCATGGACAGCGGGGGTT...TGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp TCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACACCACCCACGCCAGCCTaGCTTGCAGCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SAGNQSVQGWTRRLPLDTPPTPA*LAAAAG
Trigger: GCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGGGTGG...TGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCCACCGTCTGGGCTGTaGTGTTGTCCGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QAPPPRYSSWLKRSSEQQPPSGL*CCPCSS
Trigger: GGAGCTGCACGGACAACAGCACAGCCCAGACGGTGG...CTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp GACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCCACCGTCTGGGCTGTaGTGTTGTCCGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DQAPPPRYSSWLKRSSEQPPSGL*CCPCSS
Trigger: GGAGCTGCACGGACAACAGCACAGCCCAGACGGTGG...CTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp AATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCCCACCGTCTGGGCTGTaGTGTTGTCCGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NQSVQGWTRRLPLDTAPGPPSGL*CCPCSS
Trigger: GGAGCTGCACGGACAACAGCACAGCCCAGACGGTGG...GCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp TGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAGTGTGGCCGCCCTCTaGTGGGCCACCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CHGNPQQIWAFTGWSRTRSVAAL*WATVWA
Trigger: AGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACT...CCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp CAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTCTGCAGAAGGGGCTaGATGGTCACGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: QAPPPRYSSWLKRSSEQQLCRRG*MVTLRG
Trigger: GCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAG...CTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCGCTGCCACGAGGTaGGGTAGCACTGGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: FSWKSICPGLDQAPPPRYSAATR*GSTGAG
Trigger: ACCGGCGCCAGTGCTACCCCACCTCGTGGCAGCGCT...GTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp TTCAGGAAGGCCATATCCCGGACAAGACCCAGAAGGGAAGCCCCCAGAGCCAAGGGCTCCTGGGCGCCATaGGTCTCACCACAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: FRKAISRTRPRREAPRAKGSWAP*VSPQPR
Trigger: GCGAGGCTGTGGTGAGACCCATGGCGCCCAGGAGCC...CTTGGCTCTGGGGGCTTCCCTTCTGGGTCTTGTCCGGGATATGGCCTTCCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp GGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTTGGGCTCAGGGCTCCTaGGCGCCATGGGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: GNQSVQGWTRRLPLDTAPWAQGS*APWVSP
Trigger: TGGTGAGACCCATGGCGCCCAGGAGCCCTGAGCCCA...AGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp CGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGAACGGAAGTGCACGGTaGTCTCCGCGTCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RYSSWLKRSSEQQLSPGQNGSAR*SPRRCR
Trigger: CCTGCACCGACGCGGAGATCACCGTGCACTTCCGTT...CTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp AATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCCCGGGTGGGAAACGTTaGCGGAGGCATTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: NQSVQGWTRRLPLDTAPGPGGKR*RRHCFS
Trigger: CGAGAAGCAATGCCTCCGTCAACGTTTCCCACCCGG...GCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp GGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTTCTCGACCACCCGCGTaGCCAGCAGTTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GNQSVQGWTRRLPLDTAPSRPPA*PAVQAG
Trigger: TCCAGCCTGAACTGCTGGTCACGCGGGTGGTCGAGA...AGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp ATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGCGGGGACAAAGACCTTaGGGTAGCTGGGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: ICPGLDQAPPPRYSSWLKRGQRP*GSWDGR
Trigger: TCTCCCATCCCAGCTACCTCAAGGTCTTTGTCCCCG...CTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp CTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGATACAGCTCCTGGCTaGAGAGGTCATCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSRAGPGASPSIQLLAEEDTAPG*RGHQSS
Trigger: GCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATC...CTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp TCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGGGAAGAGCCTGGCACTaGCGTACCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SICPGLDQAPPPRYSSWLGRAWH*RTSCRR
Trigger: CCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCC...CAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp GCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTTGCTTCTCGGTGTGGTaGTCAGCGGCACCCCGACCT +
Preference number: 4 (lower is better)
Translates to: AGNQSVQGWTRRLPLDTACFSVW*SAAPRP
Trigger: AGGTCGGGGTGCCGCTGAGCACCACACCGAGAAGCA...AGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp GGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCACACGCCAGCCTGCCTTaGAGCTGCAGCTGGCATACA +
Preference number: 4 (lower is better)
Translates to: GPGASPSIQLLAEEVIRAHASLP*SCSWHT
Trigger: TGTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTG...TGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACCACCCACGCCAGCCTaGCTTGCAGCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PWQPPADMGIHWLEQDQEPPTPA*LAAAAG
Trigger: GCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGGGTGG...TTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp CCTTCAGGAAGGCCATATCCCGGACAAGACCCAGAAGGGAAGCCCCCAGAGCCACCCCTGCGGTCCAGCTaGAAGGACATGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: PSGRPYPGQDPEGKPPEPPLRSS*KDMAMT
Trigger: GGTCATCGCCATGTCCTTGCAGCTGGACCGCAGGGG...TGGCTCTGGGGGCTTCCCTTCTGGGTCTTGTCCGGGATATGGCCTTCCTGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp ATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGTGTTCCACATGCCCCTaGGGTCCAGCTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: ICPGLDQAPPPRYSSWLKCSTCP*GPAART
Trigger: TGTCCTTGCAGCTGGACCGCAGGGGCATGTGGAACA...CTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CCTGCATCCCCAGTGCCCATCAGCTCTGGGGGAAACCTCCGTCTCCCGTCCCTATGTTCCACATGCCCCTaGGGTCCAGCTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: PASPVPISSGGNLRLPSLCSTCP*GPAART
Trigger: TGTCCTTGCAGCTGGACCGCAGGGGCATGTGGAACA...TAGGGACGGGAGACGGAGGTTTCCCCCAGAGCTGATGGGCACTGGGGATGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp TCAGCCACTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGCCAGCATGTTCCACATaGCCCTGCGGTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SATHFSRADPRHSQASGRPACST*PCGPAA
Trigger: TGCAGCTGGACCGCAGGGGCATGTGGAACATGCTGG...CCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAGTGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp TGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTGCACCTGGGCAGCAGTaGCAGCCAGCCCGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WQPPADMGIHWLEQDQERAPGQQ*QPARLL
Trigger: AAGGAGCCGGGCTGGCTGGCACTGCTGCCCAGGTGC...ACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp GCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGACTGGGCCTCTGTGGGTaGCATGGCAACCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AMATPSRYGHSLVGAGPGLGLCG*HGNPQQ
Trigger: CTGCTGGGGGTTGCCATGGCACCCACAGAGGCCCAG...TCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCTGCTGGGCCACCGTCTaGGCTGTGCTGTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGCWATV*AVLLSV
Trigger: CACGGACAACAGCACAGCCCAGACGGTGGCCCAGCA...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp AGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCAGGGCTCGGCGGGCTaGTCAGGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPIYSAGNQSVQGWTRRLQGSAG*SGGGSS
Trigger: GCTGCTGCCGCCACCTGACCAGCCCGCCGAGCCCTG...GAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp CAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCCGGGTGGGAAACGTTaGCGGAGGCATTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QLEINLSRAGPGASPSIQPGGKR*RRHCFS
Trigger: CGAGAAGCAATGCCTCCGTCAACGTTTCCCACCCGG...CTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCGCACGTCCGGCTCCATaGTGGAAATCTCGACCACCC +
Preference number: 4 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGARPAP*WKSRPP
Trigger: GGGTGGTCGAGATTTCCATCATGGAGCCGGACGTGC...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp TCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGGGCAGCTACAGCACTaGAAGCCACTGTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SIQLLAEEVIRAAAVPRPGQLQH*KPLSRG
Trigger: CCCTCGGGACAGTGGCTTTCAGTGCTGTAGCTGCCC...TGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGGAAGAATCGCCGCACTaGGACGGCGATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTEESPH*DGDGGQ
Trigger: CTGGCCCCCATCGCCGTCTCAGTGCGGCGATTCTTC...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR TCA 90 bp CTCCTGGGCGCCATGGGTCTCACCACAGCCTCGCCAGGGAACAGGACCATAGGGGCAAGGACATGGCGATaGCCAGTGTACCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLGAMGLTTASPGNRTIGARTWR*PVYPEE
Trigger: TTCTTCTGGGTACACTGGTCATCGCCATGTCCTTGC...CCCTATGGTCCTGTTCCCTGGCGAGGCTGTGGTGAGACCCATGGCGCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp GCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGCCCACATGGAGGCCATaGTCACGAAGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: APPPRYSSWLKRSSEQQLPTWRP*SRRQRG
Trigger: GCCTCTTTGCCTTCGTGATCATGGCCTCCATGTGGG...CAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CCTGCATCCCCAGTGCCCATCAGCTCTGGGGGAAACCTCCGTCTCCCGTCCCTATCAGGGCACATGAGCTaGAGGGAGAGGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: PASPVPISSGGNLRLPSLSGHMS*RERYQL
Trigger: CAACTGGTACCTCTCCCTGCAGCTCATGTGCCCTGA...TAGGGACGGGAGACGGAGGTTTCCCCCAGAGCTGATGGGCACTGGGGATGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGGGAAGCGGAAGAGCCTaGCACTGCCGTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RYSSWLKRSSEQQLSPGQGSGRA*HCRTSC
Trigger: ACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCC...CTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCAGCGGCACCCCGACCTaGAAGGAGGGCTGTACCGCG +
Preference number: 4 (lower is better)
Translates to: QFIQLEINLSRAGPGASPSGTPT*KEGCTA
Trigger: CGCGGTACAGCCCTCCTTCCAGGTCGGGGTGCCGCT...GGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCACATTGCTTCTCGGTGTaGTGCTCAGCGGCACCCCGA +
Preference number: 4 (lower is better)
Translates to: PPRYSSWLKRSSEQQLSPHCFSV*CSAAPR
Trigger: TCGGGGTGCCGCTGAGCACCACACCGAGAAGCAATG...TGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACGATGGTCACGCTCCGTaGCCTGCAAGCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: FSWKSICPGLDQAPPPRYDGHAP*PASCEG
Trigger: GCCCTCACAGCTTGCAGGCCACGGAGCGTGACCATC...GTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCGTGGCCGCCCTCTGCTaGGCCACCGTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGQFIQLEINLSRAGPGAVAALC*ATVWAV
Trigger: CACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCAC...GGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp TCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGTCATGGAGGTGTAGATaGCGATGCCCACAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SICPGLDQAPPPRYSSWLSWRCR*RCPQRP
Trigger: TGGCCTCTGTGGGCATCGCCATCTACACCTCCATGA...CAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CCTGCATCCCCAGTGCCCATCAGCTCTGGGGGAAACCTCCGTCTCCCGTCCCTATCGCACAGGCACCTGTaGTCTCCAAGTAACCAAGCC +
Preference number: 4 (lower is better)
Translates to: PASPVPISSGGNLRLPSLSHRHL*SPSNQA
Trigger: GGCTTGGTTACTTGGAGACCACAGGTGCCTGTGCGA...TAGGGACGGGAGACGGAGGTTTCCCCCAGAGCTGATGGGCACTGGGGATGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp TGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGCATGCTGGGCCTCTGTaGGTGCCATGGCAACCCCCA +
Preference number: 4 (lower is better)
Translates to: CHGNPQQIWAFTGWSRTRHAGPL*VPWQPP
Trigger: TGGGGGTTGCCATGGCACCCACAGAGGCCCAGCATG...CCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp GTGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGGGACACAGCCATGCTaGGCCTCTGTGGGTGCCATG +
Preference number: 4 (lower is better)
Translates to: VPWQPPADMGIHWLEQDQGTQPC*ASVGAM
Trigger: CATGGCACCCACAGAGGCCCAGCATGGCTGTGTCCC...CTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR TCA 90 bp TTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGAAACGGAAGTGCACGGTaGTCTCCGCGTCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LFSWKSICPGLDQAPPPRNGSAR*SPRRCR
Trigger: CCTGCACCGACGCGGAGATCACCGTGCACTTCCGTT...TCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp TTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGAGGGCAGCTACAGCACTaGAAGCCACTGTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LFSWKSICPGLDQAPPPRGQLQH*KPLSRG
Trigger: CCCTCGGGACAGTGGCTTTCAGTGCTGTAGCTGCCC...TCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp TTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGAGCAGCGTGTCGTAGCTaGGGATGCACAGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: LFSWKSICPGLDQAPPPRAACRS*GCTAPP
Trigger: AGGCGGTGCTGTGCATCCTCAGCTACGACACGCTGC...TCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGGCAGCGTGTCGTAGCTaGGGATGCACAGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTAACRS*GCTAPP
Trigger: AGGCGGTGCTGTGCATCCTCAGCTACGACACGCTGC...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR TCA 90 bp AAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCCCACATGGAGGCCATaGTCACGAAGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSICPGLDQAPPPRYSSWPTWRP*SRRQRG
Trigger: GCCTCTTTGCCTTCGTGATCATGGCCTCCATGTGGG...CCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp ATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACTCTCCCGGGAGACCTaGAGGAGCCAGCGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: IQLEINLSRAGPGASPSILSRET*RSQRRS
Trigger: GCTTCTACGCTGGCTCCTGCAGGTCTCCCGGGAGAG...TATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp GCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCAGGGCACATGAGCTaGAGGGAGAGGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: APPPRYSSWLKRSSEQQLSGHMS*RERYQL
Trigger: CAACTGGTACCTCTCCCTGCAGCTCATGTGCCCTGA...CAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGCCACCGTCTGGGCTGTaGTGTTGTCCGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTPPSGL*CCPCSS
Trigger: GGAGCTGCACGGACAACAGCACAGCCCAGACGGTGG...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp CCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACCCCTGCGGTCCAGCTaGAAGGACATGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: PWQPPADMGIHWLEQDQEPLRSS*KDMAMT
Trigger: GGTCATCGCCATGTCCTTGCAGCTGGACCGCAGGGG...TTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp GACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCCAGTGTCACGTCACTaGGTACAGTTCCTCCCGATC +
Preference number: 4 (lower is better)
Translates to: DQAPPPRYSSWLKRSSEQPVSRH*VQFLPI
Trigger: GATCGGGAGGAACTGTACGCAGTGACGTGACACTGG...CTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp TCATTGCTTCCCCCACAAGGTTTGCATGAGGAGCAGAGACAGTCCAGTCTCCTGGGGGCCTGCGAGAAGTaGTCGGACACCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SLLPPQGLHEEQRQSSLLGACEK*SDTSPT
Trigger: GGTGGGGCTGGTGTCCGAGCACTTCTCGCAGGCCCC...CAGGAGACTGGACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAAGCAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCGGGGGCCGGGTaGGAAACGTTGACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGQFIQLEINLSRAGPGASPGAG*ETLTEA
Trigger: TGCCTCCGTCAACGTTTCCCACCCGGCCCCCGGGGA...GGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp GCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGAGACGTAGGCACAGGTaGGAGCCAAGCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: APPPRYSSWLKRSSEQQLRRRHR*EPSPST
Trigger: AGTTGAAGGGCTTGGCTCCCACCTGTGCCTACGTCT...CAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp ATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATAAGCCCAGGCTCCCATTaGACACGCAGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: IQLEINLSRAGPGASPSISPGSH*TRSPAA
Trigger: AGCTGCGGGACTGCGTGTCCAATGGGAGCCTGGGCT...TATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGAGCCCAGGCTCCCATTaGACACGCAGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: FIQLEINLSRAGPGASPSSPGSH*TRSPAA
Trigger: AGCTGCGGGACTGCGTGTCCAATGGGAGCCTGGGCT...CGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCCAGGGAGGCATTGAAGCTCTaGTTTTGGCTGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LTSPGRIRDTHRPQGGAREALKL*FWLLCR
Trigger: TCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTC...CCTGGCCCCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp TTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGACCCTGTCCAGGGGCTaGAAGTGCACCGACACCACG +
Preference number: 4 (lower is better)
Translates to: FIQLEINLSRAGPGASPSTLSRG*KCTDTT
Trigger: CGTGGTGTCGGTGCACTTCCAGCCCCTGGACAGGGT...CGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATTGCTGGGCCACCGTCTaGGCTGTGCTGTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDCWATV*AVLLSV
Trigger: CACGGACAACAGCACAGCCCAGACGGTGGCCCAGCA...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTGCTGGGCCACCGTCTaGGCTGTGCTGTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTCWATV*AVLLSV
Trigger: CACGGACAACAGCACAGCCCAGACGGTGGCCCAGCA...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp TGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGAGGCGTGGTAGAACGTaGAGAAGAACATGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: CPGLDQAPPPRYSSWLKRRRGRT*RRTWCR
Trigger: CCTACACCATGTTCTTCTCCACGTTCTACCACGCCT...CCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CTCACTTCTCCAGGGCGGATCCGAGACACTCACAGGCCTCAGGGAGGGGCCAGGAGGCGTGGTAGAACGTaGAGAAGAACATGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LTSPGRIRDTHRPQGGARRRGRT*RRTWCR
Trigger: CCTACACCATGTTCTTCTCCACGTTCTACCACGCCT...CCTGGCCCCTCCCTGAGGCCTGTGAGTGTCTCGGATCCGCCCTGGAGAAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp TCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACACATTCTCAGGGCACATaGGCTGCAGGGAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: SAGNQSVQGWTRRLPLDTHSQGT*AAGRGT
Trigger: GGTACCTCTCCCTGCAGCTCATGTGCCCTGAGAATG...TGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp GCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTGATACAGCTCCTGGCTaGAGAGGTCATCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGNQSVQGWTRRLPLDTADTAPG*RGHQSS
Trigger: GCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATC...AGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATCACGCCAGCCTGCCTTaGAGCTGCAGCTGGCATACA +
Preference number: 4 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDHASLP*SCSWHT
Trigger: TGTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTG...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp TGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTCACGCCAGCCTGCCTTaGAGCTGCAGCTGGCATACA +
Preference number: 4 (lower is better)
Translates to: WQPPADMGIHWLEQDQERHASLP*SCSWHT
Trigger: TGTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTG...ACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCCACCCACGCCAGCCTaGCTTGCAGCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRPPTPA*LAAAAG
Trigger: GCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGGGTGG...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCCCCTGCGGTCCAGCTaGAAGGACATGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPPLRSS*KDMAMT
Trigger: GGTCATCGCCATGTCCTTGCAGCTGGACCGCAGGGG...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp GTGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGTGTTCCACATGCCCCTaGGGTCCAGCTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VPWQPPADMGIHWLEQDQCSTCP*GPAART
Trigger: TGTCCTTGCAGCTGGACCGCAGGGGCATGTGGAACA...CTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATCCAGCATGTTCCACATaGCCCTGCGGTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDPACST*PCGPAA
Trigger: TGCAGCTGGACCGCAGGGGCATGTGGAACATGCTGG...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACCAGCATGTTCCACATaGCCCTGCGGTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PWQPPADMGIHWLEQDQEPACST*PCGPAA
Trigger: TGCAGCTGGACCGCAGGGGCATGTGGAACATGCTGG...TTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp TTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGAGCCTGCATCCCCAGTaGCCATCAGCTCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: FIQLEINLSRAGPGASPSSLHPQ*PSALGE
Trigger: TTCCCCCAGAGCTGATGGGCACTGGGGATGCAGGCT...CGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAAGACGTAGGCACAGGTaGGAGCCAAGCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: PPRYSSWLKRSSEQQLSPRRRHR*EPSPST
Trigger: AGTTGAAGGGCTTGGCTCCCACCTGTGCCTACGTCT...TGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp GGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGTCCTCCCGCGTGACTaGGTAGTTTGTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GNQSVQGWTRRLPLDTAPVLPRD*VVCEAE
Trigger: TTCTGCCTCACAAACTACCCAGTCACGCGGGAGGAC...AGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCCTTGCAGCTGCAGCTaGCATACAGGTAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: QLEINLSRAGPGASPSIQPCSCS*HTGSCV
Trigger: GACACAGCTACCTGTATGCCAGCTGCAGCTGCAAGG...CTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCTCATGGAGGTGTAGATaGCGATGCCCACAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGSWRCR*RCPQRP
Trigger: TGGCCTCTGTGGGCATCGCCATCTACACCTCCATGA...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGCATTCTCAGGGCACATaGGCTGCAGGGAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTHSQGT*AAGRGT
Trigger: GGTACCTCTCCCTGCAGCTCATGTGCCCTGAGAATG...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR TCA 90 bp TTCTCCTTTATAAGCTTAGAGATTGCTTTGGTGGTCAAGTGCAGGGCGGCTGGGCCATGCACAGGATGGTaGCCCAGATGGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FSFISLEIALVVKCRAAGPCTGW*PRWPPR
Trigger: CCGGGGCGGCCATCTGGGTCACCATCCTGTGCATGG...CCCAGCCGCCCTGCACTTGACCACCAAAGCAATCTCTAAGCTTATAAAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR TCA 90 bp CCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGGCAAGGACATGGCGATaGCCAGTGTACCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PSIQLLAEEVIRAAAVPRARTWR*PVYPEE
Trigger: TTCTTCTGGGTACACTGGTCATCGCCATGTCCTTGC...CCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGCCCACATGGAGGCCATaGTCACGAAGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTPTWRP*SRRQRG
Trigger: GCCTCTTTGCCTTCGTGATCATGGCCTCCATGTGGG...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATGGAAGAGCCTGGCACTaGCGTACCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDGRAWH*RTSCRR
Trigger: CCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCC...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp CAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGGCAGGATGTGCCAGATaGTGTGGGTGTAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: QAPPPRYSSWLKRSSEQQAGCAR*CGCSSS
Trigger: ACTACTACTACACCCACAGCATCTGGCACATCCTGC...CTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp GACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGGAGGCATTGAAGCTCTaGTTTTGGCTGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DQAPPPRYSSWLKRSSEQEALKL*FWLLCR
Trigger: TCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTC...CTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACCCTTGCAGCTGCAGCTaGCATACAGGTAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FSWKSICPGLDQAPPPRYPCSCS*HTGSCV
Trigger: GACACAGCTACCTGTATGCCAGCTGCAGCTGCAAGG...GTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp GGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTGCCTTGCAGCTGCAGCTaGCATACAGGTAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GNPQQIWAFTGWSRTRNVPCSCS*HTGSCV
Trigger: GACACAGCTACCTGTATGCCAGCTGCAGCTGCAAGG...CACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CCA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCGGTAGGGGTTCCTTCTaGGCCAAACCCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPGRGSF*AKPPEQ
Trigger: CTGCTCTGGGGGTTTGGCCCAGAAGGAACCCCTACC...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp TGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGTGGGCATTCACTGGTTaGAGCAGGACCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: CHGNPQQIWAFTGWSRTRWAFTG*SRTRNV
Trigger: CACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCA...CCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR TCA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCATTCTCAGGGCACATaGGCTGCAGGGAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPHSQGT*AAGRGT
Trigger: GGTACCTCTCCCTGCAGCTCATGTGCCCTGAGAATG...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp AGGGTATCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCCCATGCACAGGATGGTaGCCCAGATGGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RVSRPIYSAGNQSVQGWTPCTGW*PRWPPR
Trigger: CCGGGGCGGCCATCTGGGTCACCATCCTGTGCATGG...GGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGATACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp GTGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGCAAGGACATGGCGATaGCCAGTGTACCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VPWQPPADMGIHWLEQDQARTWR*PVYPEE
Trigger: TTCTTCTGGGTACACTGGTCATCGCCATGTCCTTGC...CTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR TCA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATGATACAGCTCCTGGCTaGAGAGGTCATCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDDTAPG*RGHQSS
Trigger: GCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATC...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp TTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGTGGTTTTGGCTGCTCTaGAGAAGGGGCTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: FIQLEINLSRAGPGASPSWFWLL*RRGWMV
Trigger: GACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCA...CGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR GCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTCAGGGCACATGAGCTaGAGGGAGAGGTACCAGTTG +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTSGHMS*RERYQL
Trigger: CAACTGGTACCTCTCCCTGCAGCTCATGTGCCCTGA...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp AAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGGCAGGATGTGCCAGATaGTGTGGGTGTAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: KSICPGLDQAPPPRYSSWAGCAR*CGCSSS
Trigger: ACTACTACTACACCCACAGCATCTGGCACATCCTGC...CCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CGGCTGGGGGAGGTAAGACCTTCAGGAAGGCCATATCCCGGACAAGACCCAGAACCTCCCGATCGTTCTTaGAGATCTGATAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLGEVRPSGRPYPGQDPEPPDRS*RSDSGR
Trigger: CCTGCCACTATCAGATCTGCAAGAACGATCGGGAGG...TTCTGGGTCTTGTCCGGGATATGGCCTTCCTGAAGGTCTTACCTCCCCCAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp TTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGCCAGTGTCACGTCACTaGGTACAGTTCCTCCCGATC +
Preference number: 4 (lower is better)
Translates to: FIQLEINLSRAGPGASPSPVSRH*VQFLPI
Trigger: GATCGGGAGGAACTGTACGCAGTGACGTGACACTGG...CGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCACAGCAGCTGGGATCTaGAGAGGGATCTCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPTAAGI*RGISAA
Trigger: CGCTGCTGAGATCCCTCTGCAGATCCCAGCTGCTGT...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR GCA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCGCTTTGGTGGTCAAGTaGAGGGCGGCTGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRALVVK*RAAGGG
Trigger: ACCTCCCCCAGCCGCCCTGCACTTGACCACCAAAGC...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCTGCAGAAGGGGCTaGATGGTCACGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRLCRRG*MVTLRG
Trigger: GCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAG...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGAGTCCTCCCGCGTGACTaGGTAGTTTGTGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LFSWKSICPGLDQAPPPRVLPRD*VVCEAE
Trigger: TTCTGCCTCACAAACTACCCAGTCACGCGGGAGGAC...TCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGACCTTGCAGCTGCAGCTaGCATACAGGTAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LFSWKSICPGLDQAPPPRPCSCS*HTGSCV
Trigger: GACACAGCTACCTGTATGCCAGCTGCAGCTGCAAGG...TCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp AGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCGGGGACAAAGACCTTaGGGTAGCTGGGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: RPIYSAGNQSVQGWTRRLRGQRP*GSWDGR
Trigger: TCTCCCATCCCAGCTACCTCAAGGTCTTTGTCCCCG...GAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR TCA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATATTTCAGGACTGTCTTaGGCCGTGCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDISGLS*AVPCTG
Trigger: TCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAAT...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGATTTCAGGACTGTCTTaGGCCGTGCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTISGLS*AVPCTG
Trigger: TCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAAT...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp GCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCTGGTTTTGGCTGCTCTaGAGAAGGGGCTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ANLFSWKSICPGLDQAPPWFWLL*RRGWMV
Trigger: GACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCA...GGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCAGGTGAGCACCTTCTaGAAGTTGCTAGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPQVSTF*KLLGRV
Trigger: CACCCTGCCTAGCAACTTCCAGAAGGTGCTCACCTG...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp TTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGTTGAAGCTCTGGTTTTaGCTGCTCTGCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FIQLEINLSRAGPGASPSLKLWF*LLCRRG
Trigger: GCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAA...CGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CCA 90 bp GCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAGATATGGGCATTCACTaGTTGGAGCAGGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: AMATPSRYGHSLVGAGPGDMGIH*LEQDQE
Trigger: TTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATC...TCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
3UTR CAA 72 bp AGGTGCTGCTCCTGGTCATTGCTTCCCCCACAAGGTTaGCATGAGGAGCAGAGACAGTCCAGTCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RCCSWSLLPPQG*HEEQRQSSLLN
Trigger: GTTCAGGAGACTGGACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAAGCAATGACCAGGAGCAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp CTTTATAAGCTTAGAGATTGCTTTGGTGGTCAAGTGCAGGGCGGCTGGGGGAGGCAGGTGAGCACCTTCTaGAAGTTGCTAGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LYKLRDCFGGQVQGGWGRQVSTF*KLLGRV
Trigger: CACCCTGCCTAGCAACTTCCAGAAGGTGCTCACCTG...CCTCCCCCAGCCGCCCTGCACTTGACCACCAAAGCAATCTCTAAGCTTATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp ATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGAGGCGTGGTAGAACGTaGAGAAGAACATGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: MATPSRYGHSLVGAGPGTRRGRT*RRTWCR
Trigger: CCTACACCATGTTCTTCTCCACGTTCTACCACGCCT...CGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR GCA 90 bp AGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCTCCCGATCGTTCTTaGAGATCTGATAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPIYSAGNQSVQGWTRRLPPDRS*RSDSGR
Trigger: CCTGCCACTATCAGATCTGCAAGAACGATCGGGAGG...GAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCTCATGGAGGTGTAGATaGCGATGCCCACAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRSWRCR*RCPQRP
Trigger: TGGCCTCTGTGGGCATCGCCATCTACACCTCCATGA...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCGCCAATTTATTCAGCTaGAAATCAATCTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGANLFS*KSICPG
Trigger: CCCTGGACAGATTGATTTCCAGCTGAATAAATTGGC...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp GGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGCCAATTTATTCAGCTaGAAATCAATCTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GNQSVQGWTRRLPLDTAPANLFS*KSICPG
Trigger: CCCTGGACAGATTGATTTCCAGCTGAATAAATTGGC...AGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCATTTCAGGACTGTCTTaGGCCGTGCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRISGLS*AVPCTG
Trigger: TCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAAT...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp CTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCGCAGGATGTGCCAGATaGTGTGGGTGTAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LGQFIQLEINLSRAGPGAAGCAR*CGCSSS
Trigger: ACTACTACTACACCCACAGCATCTGGCACATCCTGC...GGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp CTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCAGGCGTGGTAGAACGTaGAGAAGAACATGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGQFIQLEINLSRAGPGARRGRT*RRTWCR
Trigger: CCTACACCATGTTCTTCTCCACGTTCTACCACGCCT...GGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CCA 90 bp TTCTCCTTTATAAGCTTAGAGATTGCTTTGGTGGTCAAGTGCAGGGCGGCTGGGTTGAAGCTCTGGTTTTaGCTGCTCTGCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FSFISLEIALVVKCRAAGLKLWF*LLCRRG
Trigger: GCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAA...CCCAGCCGCCCTGCACTTGACCACCAAAGCAATCTCTAAGCTTATAAAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CCA 90 bp ATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATAGCCAATTTATTCAGCTaGAAATCAATCTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IQLEINLSRAGPGASPSIANLFS*KSICPG
Trigger: CCCTGGACAGATTGATTTCCAGCTGAATAAATTGGC...TATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR GCA 90 bp AGGGTATCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCCCTCCCGATCGTTCTTaGAGATCTGATAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVSRPIYSAGNQSVQGWTPPDRS*RSDSGR
Trigger: CCTGCCACTATCAGATCTGCAAGAACGATCGGGAGG...GGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGATACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424078.5
ENST00000431232.7
CDS-3UTR TCA 90 bp TCCTCAGTAGGAGGAAGTAAGAGGGTATCTAGGCCAATTTATTCAGCTGGAAATATTTCAGGACTGTCTTaGGCCGTGCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SSVGGSKRVSRPIYSAGNISGLS*AVPCTG
Trigger: TCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAAT...ATTTCCAGCTGAATAAATTGGCCTAGATACCCTCTTACTTCCTCCTACTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS GCA 90 bp AAAGCCACTGTCCCGAGGGGCCCCACCAGGCTCTCAGCTGTCACTTaGAGCCACCGGTCCCAGGGCGGTGAGGGCAGCAGCAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: KATVPRGPTRLSAVT*SHRSQGGEGSSRRQ
Trigger: CTGCCGCCTGCTGCTGCCCTCACCGCCCTGGGACCGGTGGCTGCAAGTGACAGCTGAGAGCCTGGTGGGGCCCCTCGGGACAGTGGCTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS CCA 90 bp AGCAGGCGGCAGGGCCAGGGGGCACCGGTGCAGGTGAGCACCTTCTaGAAGTTGCTAGGCAGGGTGACCGGGCCCACGGTGAGACGCACG +
Preference number: 5 (lower is better)
Translates to: SRRQGQGAPVQVSTF*KLLGRVTGPTVRRT
Trigger: CGTGCGTCTCACCGTGGGCCCGGTCACCCTGCCTAGCAACTTCCAGAAGGTGCTCACCTGCACCGGTGCCCCCTGGCCCTGCCGCCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS CCA 90 bp CTGAGCGTGAGCAGCAGTGTGGCCGCCCTCTGCTGGGCCACCGTCTaGGCTGTGCTGTTGTCCGTGCAGCTCCACCCACGCCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LSVSSSVAALCWATV*AVLLSVQLHPRQPA
Trigger: GGCAGGCTGGCGTGGGTGGAGCTGCACGGACAACAGCACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACTGCTGCTCACGCTCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS TCA 90 bp CCGCCCCGGAGCCCAAGAAGTCGCAGTACTGCAGCGTGTCGTAGCTaGGGATGCACAGCACCGCCTCCCCGGGCTGGTCGCAGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PPRSPRSRSTAACRS*GCTAPPPRAGRRRG
Trigger: ACCACGCCTGCGACCAGCCCGGGGAGGCGGTGCTGTGCATCCTCAGCTACGACACGCTGCAGTACTGCGACTTCTTGGGCTCCGGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS GCA 90 bp GTGATCTCCGCGTCGGTGCAGGCAGCGCCGCTCTCCCGGGAGACCTaGAGGAGCCAGCGTAGAAGCACAGCATCTGGGGGCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: VISASVQAAPLSRET*RSQRRSTASGGTRK
Trigger: CTTCCGCGTGCCCCCAGATGCTGTGCTTCTACGCTGGCTCCTGCAGGTCTCCCGGGAGAGCGGCGCTGCCTGCACCGACGCGGAGATCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000476735.1
CDS CCA 90 bp ACGGAGGCATTGCTTCTCGGTGTGGTGCTCAGCGGCACCCCGACCTaGAAGGAGGGCTGTACCGCGGTGTCGTCCGGGAAGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TEALLLGVVLSGTPT*KEGCTAVSSGKLVP
Trigger: GGGCACCAGCTTCCCGGACGACACCGCGGTACAGCCCTCCTTCCAGGTCGGGGTGCCGCTGAGCACCACACCGAGAAGCAATGCCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250930.7
ENST00000427313.5
ENST00000431232.7
ENST00000476735.1
CDS-3UTR CAA 90 bp GGGCCAGGAGCAGGGGTCTCGGAGTCCACAGCTCCCGGCCCCAGTGGTGGGCTCACGTTGACGGAGGCATaGCTTCTCGGTGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GPGAGVSESTAPGPSGGLTLTEA*LLGVVL
Trigger: GAGCACCACACCGAGAAGCAATGCCTCCGTCAACGT...GAGCCCACCACTGGGGCCGGGAGCTGTGGACTCCGAGACCCCTGCTCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS CCA 90 bp GAGGGCGTGTCCGAACACACCCTCACCGAGACCCTGTCCAGGGGCTaGAAGTGCACCGACACCACGTCCATGTCCTCCCGCGTGACTGGG +
Preference number: 5 (lower is better)
Translates to: EGVSEHTLTETLSRG*KCTDTTSMSSRVTG
Trigger: CCCAGTCACGCGGGAGGACATGGACGTGGTGTCGGTGCACTTCCAGCCCCTGGACAGGGTCTCGGTGAGGGTGTGTTCGGACACGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000475348.1
CDS TCA 90 bp GTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTaGAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGTGTCACG +
Preference number: 5 (lower is better)
Translates to: VQGWTRRLPLDTAPG*RGHQSSSCPQASVT
Trigger: CGTGACACTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS GCA 90 bp GAAGCACAGCATCTGGGGGCACGCGGAAGCGGAAGAGCCTGGCACTaGCGTACCAGCTGTAGAAGGACAGCCTCTGCGGGGCCTGCGAGA +
Preference number: 5 (lower is better)
Translates to: EAQHLGARGSGRAWH*RTSCRRTASAGPAR
Trigger: TCTCGCAGGCCCCGCAGAGGCTGTCCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCCGCGTGCCCCCAGATGCTGTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431232.7
ENST00000476735.1
CDS-3UTR CAA 90 bp TTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACCTGGTGCCCAGCGGGTaGATGACCGGAGGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: FSWKSICPGLDQAPPPRYLVPSG*MTGGAP
Trigger: CGGCGCCCCTCCGGTCATCAACCCGCTGGGCACCAG...GTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp GGGGAAACCTCCGTCTCCCGTCCCTATGGTGACCACAGCAGCAGAGGGGGATCCGCTCTCAGCTGTCACTaGCAGCCACCGGTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GETSVSRPYGDHSSRGGSALSCH*QPPVPG
Trigger: CCCTGGGACCGGTGGCTGCAAGTGACAGCTGAGAGC...GGATCCCCCTCTGCTGCTGTGGTCACCATAGGGACGGGAGACGGAGGTTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CAA 90 bp TCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGCCACGCCAGCCTGCCTaGCAGCTGCAGCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: SICPGLDQAPPPRYSSWLPRQPA*QLQLAY
Trigger: GTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGG...CAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS GCA 90 bp CCGGTGCCCGCAGCGGTAAGCGTATTTCAGGACTGTCTTGAGCCGTaGCATGCACAGGATGGTGACCCAGATGGCCGCCCCGGAGCCCAA +
Preference number: 5 (lower is better)
Translates to: PVPAAVSVFQDCLEP*HAQDGDPDGRPGAQ
Trigger: TTGGGCTCCGGGGCGGCCATCTGGGTCACCATCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAATACGCTTACCGCTGCGGGCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424078.5
CDS CCA 90 bp AGCGTAGAAGCACAGCATCTGGGGGCACGCGGAAGCGGAAGAGCCTaGCACTGCCGTACCAGCTGTAGAAGGACAGCCTCTGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: SVEAQHLGARGSGRA*HCRTSCRRTASAAS
Trigger: GGAGGCGGCAGAGGCTGTCCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCCGCGTGCCCCCAGATGCTGTGCTTCTACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250930.7
CDS CCA 90 bp GGGCTGGAAGTGCACCGACACCACGTCCATGTCCTCCCGCGTGACTaGGTAGTTTGTGAGGCAGAAGGGGCTGCGGTCCACCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: GLEVHRHHVHVLPRD*VVCEAEGAAVHPAT
Trigger: AGTGGCAGGGTGGACCGCAGCCCCTTCTGCCTCACAAACTACCCAGTCACGCGGGAGGACATGGACGTGGTGTCGGTGCACTTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000475348.1
CDS CCA 90 bp AGCGTAGAAGCACAGCATCTGGGGGCACGCGGAAGCGGAAGAGCCTaGCACTGCCGTACCAGCTGTAGAAGGACAGCCTCTGCGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SVEAQHLGARGSGRA*HCRTSCRRTASAGP
Trigger: AGGCCCCGCAGAGGCTGTCCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCCGCGTGCCCCCAGATGCTGTGCTTCTACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431232.7
ENST00000476735.1
CDS-3UTR CAA 90 bp CCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCACGCATCTCTGTCTTGTaGGCCCGCAGGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PGLDQAPPPRYSSWLKRSRISVL*ARREMV
Trigger: CACCATCTCCCTGCGGGCCAACAAGACAGAGATGCG...TGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS TCA 90 bp GGCAGCAGTGCCAGCCAGCCCGGCTCCTTACCCACATGGAGGCCATaGTCACGAAGGCAAAGAGGCAGGGCCCCAGCATGTTCCACATGC +
Preference number: 5 (lower is better)
Translates to: GSSASQPGSLPTWRP*SRRQRGRAPACSTC
Trigger: GCATGTGGAACATGCTGGGGCCCTGCCTCTTTGCCTTCGTGATCATGGCCTCCATGTGGGTAAGGAGCCGGGCTGGCTGGCACTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS CCA 90 bp ATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTaGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: ICPGLDQAPPPRYSS*LKRSSEQQLSPGQC
Trigger: ACACTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp GGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGTCTGGGCTGTGCTGTaGTCCGTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: GPGASPSIQLLAEEVIRAVWAVL*SVQLHP
Trigger: TGGGTGGAGCTGCACGGACAACAGCACAGCCCAGAC...TGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp TCATTGCTTCCCCCACAAGGTTTGCATGAGGAGCAGAGACAGTCCAGTCTCCTGCTGGTGCCCAGCGGGTaGATGACCGGAGGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: SLLPPQGLHEEQRQSSLLLVPSG*MTGGAP
Trigger: CGGCGCCCCTCCGGTCATCAACCCGCTGGGCACCAG...CAGGAGACTGGACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAAGCAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CAA 90 bp TTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACGCTCTCAGCTGTCACTaGCAGCCACCGGTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: FSWKSICPGLDQAPPPRYALSCH*QPPVPG
Trigger: CCCTGGGACCGGTGGCTGCAAGTGACAGCTGAGAGC...GTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp TCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGTTCCGCATCTCTGTCTaGTTGGCCCGCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: SICPGLDQAPPPRYSSWLFRISV*LARREM
Trigger: CATCTCCCTGCGGGCCAACAAGACAGAGATGCGGAA...CAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp TCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACACCACGCCAGCCTGCCTaGCAGCTGCAGCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: SAGNQSVQGWTRRLPLDTPRQPA*QLQLAY
Trigger: GTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGG...TGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS GCA 90 bp GACAGCAGACCAGAGGAGGCATTGAAGCTCTGGTTTTGGCTGCTCTaGAGAAGGGGCTGGATGGTCACGCTCCGTGGCCTGCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: DSRPEEALKLWFWLL*RRGWMVTLRGLQAA
Trigger: GGCAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTCCTCTGGTCTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475348.1
CDS CCA 90 bp CTCAGGGCACATGAGCTGCAGGGAGAGGTACCAGTTGTCTGTCTCTaGGTAGGGGATGATGAGGTTGGCCCTGCGAGACCAGGCGCTCAG +
Preference number: 5 (lower is better)
Translates to: LRAHELQGEVPVVCL*VGDDEVGPARPGAQ
Trigger: CTGAGCGCCTGGTCTCGCAGGGCCAACCTCATCATCCCCTACCCAGAGACAGACAACTGGTACCTCTCCCTGCAGCTCATGTGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000475348.1
CDS CCA 90 bp GAGGAGGCATTGAAGCTCTGGTTTTGGCTGCTCTGCAGAAGGGGCTaGATGGTCACGCTCCGTGGCCTGCAAGCTGCCGAGAGGACAAGG +
Preference number: 5 (lower is better)
Translates to: EEALKLWFWLLCRRG*MVTLRGLQAAERTR
Trigger: CCTTGTCCTCTCGGCAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475348.1
CDS-3UTR CAA 90 bp CGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGGCCGGGTGGGAAACGTaGACGGAGGCATTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RYSSWLKRSSEQQLSPGQAGWET*TEALLL
Trigger: GAGAAGCAATGCCTCCGTCAACGTTTCCCACCCGGC...CTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp CCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACCACGCCAGCCTGCCTaGCAGCTGCAGCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: PWQPPADMGIHWLEQDQEPRQPA*QLQLAY
Trigger: GTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGG...TTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CAA 90 bp GCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAGTCTGGGCTGTGCTGTaGTCCGTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: AMATPSRYGHSLVGAGPGVWAVL*SVQLHP
Trigger: TGGGTGGAGCTGCACGGACAACAGCACAGCCCAGAC...TCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS GCA 90 bp GACAGCAGACCAGAGGAGGCATTGAAGCTCTGGTTTTGGCTGCTCTaGAGAAGGGGCTGGATGGTCACGCTCCGTGGCCTGCAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: DSRPEEALKLWFWLL*RRGWMVTLRGLQAV
Trigger: CACAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTCCTCTGGTCTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS GCA 90 bp AAGAGGCAGGGCCCCAGCATGTTCCACATGCCCCTGCGGTCCAGCTaGAAGGACATGGCGATGACCAGTGTACCCAGAAGAAACAGCACG +
Preference number: 5 (lower is better)
Translates to: KRQGPSMFHMPLRSS*KDMAMTSVPRRNST
Trigger: CGTGCTGTTTCTTCTGGGTACACTGGTCATCGCCATGTCCTTGCAGCTGGACCGCAGGGGCATGTGGAACATGCTGGGGCCCTGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000448854.1
CDS CCA 90 bp GAGGAGGCATTGAAGCTCTGGTTTTGGCTGCTCTGCAGAAGGGGCTaGATGGTCACGCTCCGTGGCCTGCAAGCTGTGAGGGCAGCTACA +
Preference number: 5 (lower is better)
Translates to: EEALKLWFWLLCRRG*MVTLRGLQAVRAAT
Trigger: TGTAGCTGCCCTCACAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp GGGGAAACCTCCGTCTCCCGTCCCTATGGTGACCACAGCAGCAGAGGGGGATCCATTGAAGCTCTGGTTTaGGCTGCTCTGCAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GETSVSRPYGDHSSRGGSIEALV*AALQKG
Trigger: CCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAAT...GGATCCCCCTCTGCTGCTGTGGTCACCATAGGGACGGGAGACGGAGGTTTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CAA 90 bp CGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGGCCAGGAACATGAGGTaGCTGAGCGTGAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: RYSSWLKRSSEQQLSPGQARNMR*LSVSSS
Trigger: ACTGCTGCTCACGCTCAGCAACCTCATGTTCCTGGC...CTGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp TCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGGCTGTGGTGCAGTaGAGCGAAGTATTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SICPGLDQAPPPRYSSWLKAVVQ*SEVLKP
Trigger: TGGCTTCAATACTTCGCTCAACTGCACCACAGCCTT...CAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp CTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCCCACGCCAGCCTGCCTaGCAGCTGCAGCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: LGQFIQLEINLSRAGPGAPRQPA*QLQLAY
Trigger: GTATGCCAGCTGCAGCTGCAAGGCAGGCTGGCGTGG...GGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp GGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCGTCTGGGCTGTGCTGTaGTCCGTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: GQFIQLEINLSRAGPGASVWAVL*SVQLHP
Trigger: TGGGTGGAGCTGCACGGACAACAGCACAGCCCAGAC...GGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp TCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGCCAGGAACATGAGGTaGCTGAGCGTGAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SIQLLAEEVIRAAAVPRPARNMR*LSVSSS
Trigger: ACTGCTGCTCACGCTCAGCAACCTCATGTTCCTGGC...TGGCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp TTCAGGAAGGCCATATCCCGGACAAGACCCAGAAGGGAAGCCCCCAGAGCCAAGGCCAGGAACATGAGGTaGCTGAGCGTGAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: FRKAISRTRPRREAPRAKARNMR*LSVSSS
Trigger: ACTGCTGCTCACGCTCAGCAACCTCATGTTCCTGGC...CTTGGCTCTGGGGGCTTCCCTTCTGGGTCTTGTCCGGGATATGGCCTTCCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CAA 90 bp GGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAACGTGGCCAGGAACATGAGGTaGCTGAGCGTGAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GNPQQIWAFTGWSRTRNVARNMR*LSVSSS
Trigger: ACTGCTGCTCACGCTCAGCAACCTCATGTTCCTGGC...CACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS GCA 90 bp TGTACCCAGAAGAAACAGCACGTATTTCAGGACTGTCTTGAGCCGTaGCATGCACAGGATGGTGACCCAGATGGCCGCCCCGGAGCCCAA +
Preference number: 5 (lower is better)
Translates to: CTQKKQHVFQDCLEP*HAQDGDPDGRPGAQ
Trigger: TTGGGCTCCGGGGCGGCCATCTGGGTCACCATCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAATACGTGCTGTTTCTTCTGGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000448854.1
CDS GCA 90 bp CAGGCCAGTGTCACGTCACTGCGTACAGTTCCTCCCGATCGTTCTTaGAGATCTGATAGTGGCAGGGGAATTTCTGCGAGCAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QASVTSLRTVPPDRS*RSDSGRGISASRPR
Trigger: CCTGGGCCTGCTCGCAGAAATTCCCCTGCCACTATCAGATCTGCAAGAACGATCGGGAGGAACTGTACGCAGTGACGTGACACTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp CTGGACCAGGCGCCTCCCCCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGAAGGCTGTGGTGCAGTaGAGCGAAGTATTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LDQAPPPRYSSWLKRSSEKAVVQ*SEVLKP
Trigger: TGGCTTCAATACTTCGCTCAACTGCACCACAGCCTT...CTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGGGGGAGGCGCCTGGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp GCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATACAGCTTATTTCAGGACTGTCTaGAGCCGTGCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: AGNQSVQGWTRRLPLDTAYFRTV*SRAMHR
Trigger: CCTGTGCATGGCACGGCTCAAGACAGTCCTGAAATA...AGCTGTATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp CCTCGATACAGCTCCTGGCTGAAGAGGTCATCAGAGCAGCAGCTGTCCCCAGGCAGCTTAGAGATTGCTTaGGTGGTCAAGTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PRYSSWLKRSSEQQLSPGSLEIA*VVKCRA
Trigger: CGCCCTGCACTTGACCACCAAAGCAATCTCTAAGCT...GCCTGGGGACAGCTGCTGCTCTGATGACCTCTTCAGCCAGGAGCTGTATCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS GCA 90 bp GAGGTCATCAGAGCAGCAGCTGTCCCCAGGCCAGTGTCACGTCACTaGGTACAGTTCCTCCCGATCGTTCTTGCAGATCTGATAGTGGCA +
Preference number: 5 (lower is better)
Translates to: EVIRAAAVPRPVSRH*VQFLPIVLADLIVA
Trigger: TGCCACTATCAGATCTGCAAGAACGATCGGGAGGAACTGTACGCAGTGACGTGACACTGGCCTGGGGACAGCTGCTGCTCTGATGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS CCA 90 bp GGCCATAGGGTCCACAATCGTTCAAACAGGGCACCAGGTACAAGGTaGTCTCCACGTGGACCACAGCCTGCTCACAGTCCTCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: GHRVHNRSNRAPGTR*SPRGPQPAHSPQHS
Trigger: AGAATGCTGAGGACTGTGAGCAGGCTGTGGTCCACGTGGAGACCACCTTGTACCTGGTGCCCTGTTTGAACGATTGTGGACCCTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000448854.1
ENST00000475348.1
CDS CCA 90 bp GGCCATAGGGTCCACAATCGTTCAAACAGGGCACCAGGTACAAGGTaGTCTCCACGTGGACCACAGCCTGCTCACAGTCCCTTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GHRVHNRSNRAPGTR*SPRGPQPAHSPFEE
Trigger: TTCCTCAAAGGGACTGTGAGCAGGCTGTGGTCCACGTGGAGACCACCTTGTACCTGGTGCCCTGTTTGAACGATTGTGGACCCTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467452.1
CDS-3UTR CAA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCACGTTGACGGAGGCATaGCTTCTCGGTGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPTLTEA*LLGVVL
Trigger: GAGCACCACACCGAGAAGCAATGCCTCCGTCAACGT...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp TCATTGCTTCCCCCACAAGGTTTGCATGAGGAGCAGAGACAGTCCAGTCTCCTGCGCATCTCTGTCTTGTaGGCCCGCAGGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SLLPPQGLHEEQRQSSLLRISVL*ARREMV
Trigger: CACCATCTCCCTGCGGGCCAACAAGACAGAGATGCG...CAGGAGACTGGACTGTCTCTGCTCCTCATGCAAACCTTGTGGGGGAAGCAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CAA 90 bp TGCCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGTATTTCAGGACTGTCTaGAGCCGTGCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: CHGNPQQIWAFTGWSRTRYFRTV*SRAMHR
Trigger: CCTGTGCATGGCACGGCTCAAGACAGTCCTGAAATA...CCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CAA 90 bp TATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCCTCGATTGCTGCTCCTGGTCATaGCTTCCCCCACAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: YSAGNQSVQGWTRRLPLDCCSWS*LPPQGL
Trigger: CAAACCTTGTGGGGGAAGCAATGACCAGGAGCAGCA...ATCGAGGGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS-3UTR CAA 90 bp CCATGGCAACCCCCAGCAGATATGGGCATTCACTGGTTGGAGCAGGACCAGGAAATGGGCATTCACTGGTaGGAGCAGGACCAGGAACGT +
Preference number: 5 (lower is better)
Translates to: PWQPPADMGIHWLEQDQEMGIHW*EQDQER
Trigger: ACGTTCCTGGTCCTGCTCCAACCAGTGAATGCCCAT...TTCCTGGTCCTGCTCCAACCAGTGAATGCCCATATCTGCTGGGGGTTGCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS-3UTR CAA 90 bp CTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTTCCGCATCTCTGTCTaGTTGGCCCGCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: LGQFIQLEINLSRAGPGAFRISV*LARREM
Trigger: CATCTCCCTGCGGGCCAACAAGACAGAGATGCGGAA...GGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp CCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCATTGAAGCTCTGGTTTaGGCTGCTCTGCAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PIYSAGNQSVQGWTRRLPIEALV*AALQKG
Trigger: CCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAAT...GGGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp GCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCTCCCCAGTTGAGCGAAGTATaGAAGCCAAGGAAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: ANLFSWKSICPGLDQAPPQLSEV*KPRKGE
Trigger: CTCGCCCTTCCTTGGCTTCAATACTTCGCTCAACTG...GGGAGGCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCCAGTTGAGCGAAGTATaGAAGCCAAGGAAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRQLSEV*KPRKGE
Trigger: CTCGCCCTTCCTTGGCTTCAATACTTCGCTCAACTG...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS-3UTR CAA 90 bp TCTAGGCCAATTTATTCAGCTGGAAATCAATCTGTCCAGGGCTGGACCAGGCGCTATTTCAGGACTGTCTaGAGCCGTGCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: SRPIYSAGNQSVQGWTRRYFRTV*SRAMHR
Trigger: CCTGTGCATGGCACGGCTCAAGACAGTCCTGAAATA...GCGCCTGGTCCAGCCCTGGACAGATTGATTTCCAGCTGAATAAATTGGCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS-3UTR CAA 90 bp TCCTCAGTAGGAGGAAGTAAGAGGGTATCTAGGCCAATTTATTCAGCTGGAAATGTCTGGGCTGTGCTGTaGTCCGTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: SSVGGSKRVSRPIYSAGNVWAVL*SVQLHP
Trigger: TGGGTGGAGCTGCACGGACAACAGCACAGCCCAGAC...ATTTCCAGCTGAATAAATTGGCCTAGATACCCTCTTACTTCCTCCTACTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431232.7
CDS CCA 72 bp CGGGCAGGAGGTAGAAGGCCCAGCGCTGCCACGAGGTaGGGTAGCACTGGCGCCGGTGCCCGCAGCGGTAAG +
Preference number: 6 (lower is better)
Translates to: RAGGRRPSAATR*GSTGAGARSGK
Trigger: CTTACCGCTGCGGGCACCGGCGCCAGTGCTACCCCACCTCGTGGCAGCGCTGGGCCTTCTACCTCCTGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS CAA 90 bp CGGCAGGGCCAGGGGGCACCGGTGCAGGTGAGCACCTTCTGGAAGTaGCTAGGCAGGGTGACCGGGCCCACGGTGAGACGCACGGGGCAG +
Preference number: 6 (lower is better)
Translates to: RQGQGAPVQVSTFWK*LGRVTGPTVRRTGQ
Trigger: CTGCCCCGTGCGTCTCACCGTGGGCCCGGTCACCCTGCCTAGCAACTTCCAGAAGGTGCTCACCTGCACCGGTGCCCCCTGGCCCTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS GCA 72 bp GCGTCGGTGCAGGCAGCGCCGCTCTCCCGGGAGACCTaGAGGAGCCAGCGTAGAAGCACAGCATCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: ASVQAAPLSRET*RSQRRSTASGG
Trigger: GCCCCCAGATGCTGTGCTTCTACGCTGGCTCCTGCAGGTCTCCCGGGAGAGCGGCGCTGCCTGCACCGACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000476735.1
CDS GCA 72 bp GTGTGGCCGCCCTCTGCTGGGCCACCGTCTGGGCTGTaGTGTTGTCCGTGCAGCTCCACCCACGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: VWPPSAGPPSGL*CCPCSSTHASL
Trigger: CAGGCTGGCGTGGGTGGAGCTGCACGGACAACAGCACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS CAA 72 bp GCCGCCCTCTGCTGGGCCACCGTCTGGGCTGTGCTGTaGTCCGTGCAGCTCCACCCACGCCAGCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: AALCWATVWAVL*SVQLHPRQPAL
Trigger: CAAGGCAGGCTGGCGTGGGTGGAGCTGCACGGACAACAGCACAGCCCAGACGGTGGCCCAGCAGAGGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS CAA 90 bp GAGGGCTGTACCGCGGTGTCGTCCGGGAAGCTGGTGCCCAGCGGGTaGATGACCGGAGGGGCGCCGGAACGGAAGTGCCGGAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: EGCTAVSSGKLVPSG*MTGGAPERKCRRGR
Trigger: TCTCCCTCTCCGGCACTTCCGTTCCGGCGCCCCTCCGGTCATCAACCCGCTGGGCACCAGCTTCCCGGACGACACCGCGGTACAGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427313.5
CDS CAA 90 bp GAGGGCTGTACCGCGGTGTCGTCCGGGAAGCTGGTGCCCAGCGGGTaGATGACCGGAGGGGCGCCGGAACGGAAGTGCACGGTGATCTCC +
Preference number: 6 (lower is better)
Translates to: EGCTAVSSGKLVPSG*MTGGAPERKCTVIS
Trigger: GGAGATCACCGTGCACTTCCGTTCCGGCGCCCCTCCGGTCATCAACCCGCTGGGCACCAGCTTCCCGGACGACACCGCGGTACAGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000476735.1
CDS CAA 90 bp AGCAGTGTGGCCGCCCTCTGCTGGGCCACCGTCTGGGCTGTGCTGTaGTCCGTGCAGCTCCACCCACGCCAGCCTGCCTTGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSVAALCWATVWAVL*SVQLHPRQPALQLQ
Trigger: CTGCAGCTGCAAGGCAGGCTGGCGTGGGTGGAGCTGCACGGACAACAGCACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS CCA 72 bp CAGGGCCAGGGGGCACCGGTGCAGGTGAGCACCTTCTaGAAGTTGCTAGGCAGGGTGACCGGGCCCACGGTG +
Preference number: 6 (lower is better)
Translates to: QGQGAPVQVSTF*KLLGRVTGPTV
Trigger: CACCGTGGGCCCGGTCACCCTGCCTAGCAACTTCCAGAAGGTGCTCACCTGCACCGGTGCCCCCTGGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS CCA 72 bp AGCAGCAGTGTGGCCGCCCTCTGCTGGGCCACCGTCTaGGCTGTGCTGTTGTCCGTGCAGCTCCACCCACGC +
Preference number: 6 (lower is better)
Translates to: SSSVAALCWATV*AVLLSVQLHPR
Trigger: GCGTGGGTGGAGCTGCACGGACAACAGCACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACTGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS TCA 72 bp CCACGAACCAGTCCCCGGGGGCCGGGTGGGAAACGTTaGCGGAGGCATTGCTTCTCGGTGTGGTGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: PRTSPRGPGGKR*RRHCFSVWCSA
Trigger: CGCTGAGCACCACACCGAGAAGCAATGCCTCCGTCAACGTTTCCCACCCGGCCCCCGGGGACTGGTTCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250930.7
ENST00000427313.5
ENST00000431232.7
ENST00000476735.1
CDS GCA 72 bp CATCTGGGGGCACGCGGAAGCGGAAGAGCCTGGCACTaGCGTACCAGCTGTAGAAGGACAGCCTCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: HLGARGSGRAWH*RTSCRRTASAA
Trigger: GGCGGCAGAGGCTGTCCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCCGCGTGCCCCCAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250930.7
CDS GCA 72 bp CATCTGGGGGCACGCGGAAGCGGAAGAGCCTGGCACTaGCGTACCAGCTGTAGAAGGACAGCCTCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: HLGARGSGRAWH*RTSCRRTASAG
Trigger: CCCCGCAGAGGCTGTCCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCCGCGTGCCCCCAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431232.7
ENST00000476735.1
CDS CCA 72 bp TTGCTTCTCGGTGTGGTGCTCAGCGGCACCCCGACCTaGAAGGAGGGCTGTACCGCGGTGTCGTCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: LLLGVVLSGTPT*KEGCTAVSSGK
Trigger: CTTCCCGGACGACACCGCGGTACAGCCCTCCTTCCAGGTCGGGGTGCCGCTGAGCACCACACCGAGAAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250930.7
ENST00000427313.5
ENST00000431232.7
ENST00000476735.1
CDS CCA 72 bp TTGCTGAGCGTGAGCAGCAGTGTGGCCGCCCTCTGCTaGGCCACCGTCTGGGCTGTGCTGTTGTCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: LLSVSSSVAALC*ATVWAVLLSVQ
Trigger: CTGCACGGACAACAGCACAGCCCAGACGGTGGCCCAGCAGAGGGCGGCCACACTGCTGCTCACGCTCAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS CAA 72 bp GCCACGAACCAGTCCCCGGGGGCCGGGTGGGAAACGTaGACGGAGGCATTGCTTCTCGGTGTGGTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: ATNQSPGAGWET*TEALLLGVVLS
Trigger: GCTGAGCACCACACCGAGAAGCAATGCCTCCGTCAACGTTTCCCACCCGGCCCCCGGGGACTGGTTCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250930.7
ENST00000427313.5
ENST00000431232.7
ENST00000476735.1
CDS TCA 72 bp AGCCCAAGAAGTCGCAGTACTGCAGCGTGTCGTAGCTaGGGATGCACAGCACCGCCTCCCCGGGCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: SPRSRSTAACRS*GCTAPPPRAGR
Trigger: GCGACCAGCCCGGGGAGGCGGTGCTGTGCATCCTCAGCTACGACACGCTGCAGTACTGCGACTTCTTGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS TCA 72 bp GCCGGTGCCCGCAGCGGTAAGCCCACATGGAGGCCATaGTCACGAAGGCAAAGAGGCAGGGCCCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: AGARSGKPTWRP*SRRQRGRAPAC
Trigger: ACATGCTGGGGCCCTGCCTCTTTGCCTTCGTGATCATGGCCTCCATGTGGGCTTACCGCTGCGGGCACCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS CCA 72 bp TCCGAACACACCCTCACCGAGACCCTGTCCAGGGGCTaGAAGTGCACCGACACCACGTCCATGTCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: SEHTLTETLSRG*KCTDTTSMSSR
Trigger: GCGGGAGGACATGGACGTGGTGTCGGTGCACTTCCAGCCCCTGGACAGGGTCTCGGTGAGGGTGTGTTCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000475348.1
CDS CCA 72 bp AGCTTTCAGCAGCCCTGGAGGAAGCACCCCTCTAGCTaGGTCACTCCGAACGCCAACCTCAGGCAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: SFQQPWRKHPSS*VTPNANLRQPG
Trigger: GCCGGGCTGCCTGAGGTTGGCGTTCGGAGTGACCCAGCTAGAGGGGTGCTTCCTCCAGGGCTGCTGAAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467452.1
CDS TCA 72 bp GCCAGCCAGCCCGGCTCCTTACCCACATGGAGGCCATaGTCACGAAGGCAAAGAGGCAGGGCCCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: ASQPGSLPTWRP*SRRQRGRAPAC
Trigger: ACATGCTGGGGCCCTGCCTCTTTGCCTTCGTGATCATGGCCTCCATGTGGGTAAGGAGCCGGGCTGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448854.1
CDS CCA 72 bp GCACAGCATCTGGGGGCACGCGGAAGCGGAAGAGCCTaGCACTGCCGTACCAGCTGTAGAAGGACAGCCTCT +
Preference number: 6 (lower is better)
Translates to: AQHLGARGSGRA*HCRTSCRRTAS
Trigger: AGAGGCTGTCCTTCTACAGCTGGTACGGCAGTGCCAGGCTCTTCCGCTTCCGCGTGCCCCCAGATGCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000476735.1
CDS CCA 72 bp GTGCACCGACACCACGTCCATGTCCTCCCGCGTGACTaGGTAGTTTGTGAGGCAGAAGGGGCTGCGGTCCAC +
Preference number: 6 (lower is better)
Translates to: VHRHHVHVLPRD*VVCEAEGAAVH
Trigger: GTGGACCGCAGCCCCTTCTGCCTCACAAACTACCCAGTCACGCGGGAGGACATGGACGTGGTGTCGGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000475348.1
CDS TCA 72 bp GTAGACGGAGGCCTCCACCAGGAAGAATCGCCGCACTaGGACGGCGATGGGGGCCAGGAACATGAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: VDGGLHQEESPH*DGDGGQEHEVA
Trigger: AGCAACCTCATGTTCCTGGCCCCCATCGCCGTCTCAGTGCGGCGATTCTTCCTGGTGGAGGCCTCCGTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
ENST00000448854.1
ENST00000467452.1
CDS CCA 72 bp AGCTCTGGTTTTGGCTGCTCTGCAGAAGGGGCTGGATaGTCACGCTCCGTGGCCTGCAAGCTGCCGAGAGGA +
Preference number: 6 (lower is better)
Translates to: SSGFGCSAEGAG*SRSVACKLPRG
Trigger: TCCTCTCGGCAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475348.1
CDS GCA 72 bp CCAGAGGAGGCATTGAAGCTCTGGTTTTGGCTGCTCTaGAGAAGGGGCTGGATGGTCACGCTCCGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PEEALKLWFWLL*RRGWMVTLRGL
Trigger: CAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAATGCCTCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000475348.1
CDS GCA 72 bp GGCCCCAGCATGTTCCACATGCCCCTGCGGTCCAGCTaGAAGGACATGGCGATGACCAGTGTACCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: GPSMFHMPLRSS*KDMAMTSVPRR
Trigger: TCTTCTGGGTACACTGGTCATCGCCATGTCCTTGCAGCTGGACCGCAGGGGCATGTGGAACATGCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000448854.1
CDS GCA 72 bp ACAGTCCCTTTGAGGAAGGGGCCACAGGAAAGCTGGTaGAGTGATCTGACAGCCCAGCTGCCACCAGCGCTC +
Preference number: 6 (lower is better)
Translates to: TVPLRKGPQESW*SDLTAQLPPAL
Trigger: GAGCGCTGGTGGCAGCTGGGCTGTCAGATCACTGCACCAGCTTTCCTGTGGCCCCTTCCTCAAAGGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467452.1
CDS CCA 72 bp TTGAAGCTCTGGTTTTGGCTGCTCTGCAGAAGGGGCTaGATGGTCACGCTCCGTGGCCTGCAAGCTGCCGAG +
Preference number: 6 (lower is better)
Translates to: LKLWFWLLCRRG*MVTLRGLQAAE
Trigger: CTCGGCAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475348.1
CDS CCA 72 bp TTGAAGCTCTGGTTTTGGCTGCTCTGCAGAAGGGGCTaGATGGTCACGCTCCGTGGCCTGCAAGCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: LKLWFWLLCRRG*MVTLRGLQAVR
Trigger: CCTCACAGCTTGCAGGCCACGGAGCGTGACCATCCAGCCCCTTCTGCAGAGCAGCCAAAACCAGAGCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250930.7
ENST00000431232.7
CDS CAA 72 bp GGTCTCCACGTGGACCACAGCCTGCTCACAGTCCCTTaGAGGAAGGGGCCACAGGAAAGCTGGTGCAGTGAT +
Preference number: 6 (lower is better)
Translates to: GLHVDHSLLTVP*RKGPQESWCSD
Trigger: ATCACTGCACCAGCTTTCCTGTGGCCCCTTCCTCAAAGGGACTGTGAGCAGGCTGTGGTCCACGTGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467452.1
CDS CAA 90 bp GTACAAGGTGGTCTCCACGTGGACCACAGCCTGCTCACAGTCCCTTaGAGGAAGGGGCCACAGGAAAGCTGGTGCAGTGATCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: VQGGLHVDHSLLTVP*RKGPQESWCSDLTA
Trigger: GGCTGTCAGATCACTGCACCAGCTTTCCTGTGGCCCCTTCCTCAAAGGGACTGTGAGCAGGCTGTGGTCCACGTGGAGACCACCTTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467452.1
CDS GCA 72 bp AGAGCAGCAGCTGTCCCCAGGCCAGTGTCACGTCACTaGGTACAGTTCCTCCCGATCGTTCTTGCAGATCTG +
Preference number: 6 (lower is better)
Translates to: RAAAVPRPVSRH*VQFLPIVLADL
Trigger: CAGATCTGCAAGAACGATCGGGAGGAACTGTACGCAGTGACGTGACACTGGCCTGGGGACAGCTGCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS TCA 72 bp CAGCCTGCTCACAGTCCTCAGCATTCTCAGGGCACATaGGCTGCAGGGAGAGGTACCAGTTGTCTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: QPAHSPQHSQGT*AAGRGTSCLSL
Trigger: CAGAGACAGACAACTGGTACCTCTCCCTGCAGCTCATGTGCCCTGAGAATGCTGAGGACTGTGAGCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000448854.1
ENST00000475348.1
CDS GCA 72 bp GTCACGTCACTGCGTACAGTTCCTCCCGATCGTTCTTaGAGATCTGATAGTGGCAGGGGAATTTCTGCGAGC +
Preference number: 6 (lower is better)
Translates to: VTSLRTVPPDRS*RSDSGRGISAS
Trigger: GCTCGCAGAAATTCCCCTGCCACTATCAGATCTGCAAGAACGATCGGGAGGAACTGTACGCAGTGACGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000424078.5
ENST00000431232.7
CDS CAA 72 bp ACGGAAGTCCAGAGACGTCTGCTAAGTCACAGAGTGTaGGCAATGGAGAGACTCTTCTTCCAGCGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: TEVQRRLLSHRV*AMERLFFQRPK
Trigger: CTTGGGCCGCTGGAAGAAGAGTCTCTCCATTGCCAACACTCTGTGACTTAGCAGACGTCTCTGGACTTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427313.5
ENST00000476735.1
CDS CAA 72 bp GTACCCAGAAGAAACAGCACGTATTTCAGGACTGTCTaGAGCCGTGCCATGCACAGGATGGTGACCCAGATG +
Preference number: 6 (lower is better)
Translates to: VPRRNSTYFRTV*SRAMHRMVTQM
Trigger: CATCTGGGTCACCATCCTGTGCATGGCACGGCTCAAGACAGTCCTGAAATACGTGCTGTTTCTTCTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250930.7
ENST00000431232.7
ENST00000448854.1