RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGAP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000165152

Ensembl transcript IDs: ENST00000374847.5, ENST00000374848.8, ENST00000374851.1, ENST00000482920.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGTGTGGCTGTGTGGAGGGAGAGGTCCGGACCTGTGGCAAACTaGTGCTCCTGCCAGGAGGCTACCAAAGCCAAGGCTCTTAACATA +
Preference number: 1 (lower is better)
Translates to: GSVAVWRERSGPVAN*CSCQEATKAKALNI
Trigger: TATGTTAAGAGCCTTGGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCTCCCTCCACACAGCCACACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 90 bp GCTGTGTGGAGGGAGAGGTCCGGACCTGTGGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCCAAGGCTCTTAACATATTGAGGTTC +
Preference number: 1 (lower is better)
Translates to: AVWRERSGPVANCCS*QEATKAKALNILRF
Trigger: GAACCTCAATATGTTAAGAGCCTTGGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCTCCCTCCACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 90 bp AGTGTGGCTGTGTGGAGGGAGAGGTCCGGACCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACCAAAGCCAAGGCTCTTAACATATTG +
Preference number: 1 (lower is better)
Translates to: SVAVWRERSGPVANC*SCQEATKAKALNIL
Trigger: CAATATGTTAAGAGCCTTGGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCTCCCTCCACACAGCCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 90 bp GCTGCTCCTGCCAGGAGGCTACCAAAGCCAAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCAGTGCCTATATCTCTAACAACAGTA +
Preference number: 1 (lower is better)
Translates to: AAPARRLPKPRLLTY*GSSAAPVPISLTTV
Trigger: TACTGTTGTTAGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCTTGGCTTTGGTAGCCTCCTGGCAGGAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 90 bp AGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGCATCTCTGGGTCTCAATTTGTTCAT +
Preference number: 1 (lower is better)
Translates to: RRAPFPFWLCCCSGL*PAEQFSISGSQFVH
Trigger: ATGAACAAATTGAGACCCAGAGATGCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR CCA 90 bp GGGTCTCAAGATGGAAGCTCACTATGGGAATTTAAAAGCAAACTGTaGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATC +
Preference number: 1 (lower is better)
Translates to: GSQDGSSLWEFKSKL*HRNKLDNCLNSNII
Trigger: GATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAGTTTGCTTTTAAATTCCCATAGTGAGCTTCCATCTTGAGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 90 bp TTCCTCAGCTGCCCCAGTGCCTATATCTCTAACAACAGTAAACAGTaGAATACCTGCAGGCAACCATGTCTAAATAAAGAGATAAATATT +
Preference number: 1 (lower is better)
Translates to: FLSCPSAYISNNSKQ*NTCRQPCLNKEINI
Trigger: AATATTTATCTCTTTATTTAGACATGGTTGCCTGCAGGTATTTCACTGTTTACTGTTGTTAGAGATATAGGCACTGGGGCAGCTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 90 bp TTAGGATTAAGTGAGAGACTTCAGCTTTGGTGTAAAGCTGTCAGCTaGCCTAATCAAGGACAATACACAAAAATTAGACTCCTTATAAGA +
Preference number: 1 (lower is better)
Translates to: LGLSERLQLWCKAVS*PNQGQYTKIRLLIR
Trigger: TCTTATAAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACCAAAGCTGAAGTCTCTCACTTAATCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGGCAGTGTGGCTGTGTaGAGGGAGAGGTCCGGACCT +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRGSVAV*RERSGP
Trigger: AGGTCCGGACCTCTCCCTCCACACAGCCACACTGCC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACC +
Preference number: 2 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQPVANC*SCQEAT
Trigger: GGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCACCTGCCTCCAAGATaGCGGGCACTGCACGGCTTT +
Preference number: 2 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQHLPPR*RALHGF
Trigger: AAAGCCGTGCAGTGCCCGGCATCTTGGAGGCAGGTG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAAGAGGTCCGGACCTGTaGCAAACTGCTGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRRGPDL*QTAAPA
Trigger: GGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGTGGGTCAGACTGCATaGGGCAGTGTGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKVGQTA*GSVAVW
Trigger: CCACACAGCCACACTGCCTCATGCAGTCTGACCCAC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACC +
Preference number: 2 (lower is better)
Translates to: QVKETNGIYPHGPASLGIPVANC*SCQEAT
Trigger: GGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDANCCS*QEATKA
Trigger: GGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATATGCACCCTCACTGGGTaGGTCAGACTGCATGAGGCA +
Preference number: 2 (lower is better)
Translates to: QVKETNGIYPHGPASLGICTLTG*VRLHEA
Trigger: TGCCTCATGCAGTCTGACCCACCCAGTGAGGGTGCA...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQRLLTY*GSSAAP
Trigger: TGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGTCATCTGGAATAGCTaGTACATAGGTGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRVIWNS*YIGGSS
Trigger: GGAGCTGCCACCTATGTACCAGCTATTCCAGATGAC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGTGGGTCAGACTGCATaGGGCAGTGTGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSVGQTA*GSVAVW
Trigger: CCACACAGCCACACTGCCTCATGCAGTCTGACCCAC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCACCTGCCTCCAAGATaGCGGGCACTGCACGGCTTT +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSHLPPR*RALHGF
Trigger: AAAGCCGTGCAGTGCCCGGCATCTTGGAGGCAGGTG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTTGCACCCTCACTGGGTaGGTCAGACTGCATGAGGCA +
Preference number: 2 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSCTLTG*VRLHEA
Trigger: TGCCTCATGCAGTCTGACCCACCCAGTGAGGGTGCA...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAAAAAGTGCAGGGGCTTaGAGTCAGAAGAGCTCCGTT +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKKSAGA*SQKSSV
Trigger: AACGGAGCTCTTCTGACTTCAAGCCCCTGCACTTTT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATTGAGGTTCCTCAGCTaGCCCAGTGCCTATATCTCT +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLRFLS*PSAYIS
Trigger: AGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCC +
Preference number: 2 (lower is better)
Translates to: PGTARLLSVFITSGQGNKANCCS*QEATKA
Trigger: GGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGC...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACTGGAATCTATCCACATaGTCCTGCCTCGTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDWNLST*SCLVGH
Trigger: ATGCCCAACGAGGCAGGACCATGTGGATAGATTCCA...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGTCATCTGGAATAGCTaGTACATAGGTGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKVIWNS*YIGGSS
Trigger: GGAGCTGCCACCTATGTACCAGCTATTCCAGATGAC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGATATTCTAGCAGGGCTTaGTCATCTGGAATAGCTGGT +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRYSSRA*SSGIAG
Trigger: ACCAGCTATTCCAGATGACCAAGCCCTGCTAGAATA...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCCCAGAGTGATTATATaGCCTGCCCAAGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSPRVII*PAQGGH
Trigger: GTGACCACCTTGGGCAGGTCATATAATCACTCTGGG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGATCCTCCAAACTAACATaGCAATGTGTTTCTGCCATC +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRSSKLT*QCVSAI
Trigger: GATGGCAGAAACACATTGTCATGTTAGTTTGGAGGA...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCAAGATGCCGGGCACTaGACGGCTTTTATCAGTTTT +
Preference number: 2 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDQDAGH*TAFISF
Trigger: AAAACTGATAAAAGCCGTGCAGTGCCCGGCATCTTG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCACGTCGTTAGGCCATaGCAGAGATCTGAAATAAAA +
Preference number: 2 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQHVVRP*QRSEIK
Trigger: TTTTATTTCAGATCTCTGCCATGGCCTAACGACGTG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGACACGTCGTTAGGCCATaGCAGAGATCTGAAATAAAA +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRHVVRP*QRSEIK
Trigger: TTTTATTTCAGATCTCTGCCATGGCCTAACGACGTG...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSRLLTY*GSSAAP
Trigger: TGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGTGGGTCAGACTGCATaGGGCAGTGTGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYVGQTA*GSVAVW
Trigger: CCACACAGCCACACTGCCTCATGCAGTCTGACCCAC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACCCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACC +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYPVANC*SCQEAT
Trigger: GGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGG...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTAGAGGTCCGGACCTGTaGCAAACTGCTGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSRGPDL*QTAAPA
Trigger: GGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCT...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTGGCAGTGTGGCTGTGTaGAGGGAGAGGTCCGGACCT +
Preference number: 2 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCGSVAV*RERSGP
Trigger: AGGTCCGGACCTCTCCCTCCACACAGCCACACTGCC...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACACTTTGGACATTGCTaGGGGATACATAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKHFGHC*GIHNSS
Trigger: TGAGCTGTTATGTATCCCCCAGCAATGTCCAAAGTG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGGAGGAATGAAGGAGTaGGATCTGAACATTGTAATA +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRGGMKE*DLNIVI
Trigger: TATTACAATGTTCAGATCCCACTCCTTCATTCCTCC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAAACAACAGTAAACAGTaGAATACCTGCAGGCAACCA +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKNNSKQ*NTCRQP
Trigger: TGGTTGCCTGCAGGTATTTCACTGTTTACTGTTGTT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSRLLTY*GSSAAP
Trigger: TGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGAACGTGGGGATAGGTaGAAGCTGAGCTGCACATCC +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHERGDR*KLSCTS
Trigger: GGATGTGCAGCTCAGCTTTCACCTATCCCCACGTTC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACTTAGAATAAGCTCATaGGGAGTCTCATTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLRISS*GVSFPS
Trigger: GCTTGGAAATGAGACTCCTCATGAGCTTATTCTAAG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAAACTGGACAATTGCTTaGACTCTAATATCATCATCC +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRNWTIA*TLISSS
Trigger: GGATGATGATATTAGAGTTCAAGCAATTGTCCAGTT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCTATCCACATGGTCCTaGCTCGTTGGGCATATATTC +
Preference number: 2 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSLSTWS*LVGHIF
Trigger: GAATATATGCCCAACGAGGCAGGACCATGTGGATAG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATAAAAGCCAGATCACCTaGCTCCAAGATGCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHKSQIT*LQDAGH
Trigger: GTGCCCGGCATCTTGGAGGCAGGTGATCTGGCTTTT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAATGACAATGTGTTTCTaGCATCTTAGCTTACAGAGA +
Preference number: 2 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRMTMCF*HLSLQR
Trigger: TCTCTGTAAGCTAAGATGGCAGAAACACATTGTCAT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAGAGGTCCGGACCTGTaGCAAACTGCTGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCRGPDL*QTAAPA
Trigger: GGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTGCACCCTCACTGGGTaGGTCAGACTGCATGAGGCA +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYCTLTG*VRLHEA
Trigger: TGCCTCATGCAGTCTGACCCACCCAGTGAGGGTGCA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGTGTGCACAAAATTTTTaGCAGTCACAAGCTCTAACA +
Preference number: 2 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQCAQNF*QSQALT
Trigger: TGTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACA...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCACGTCGTTAGGCCATaGCAGAGATCTGAAATAAAA +
Preference number: 2 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDHVVRP*QRSEIK
Trigger: TTTTATTTCAGATCTCTGCCATGGCCTAACGACGTG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGGGATAGGTGAAAGCTaGGCTGCACATCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHGIGES*AAHPSE
Trigger: CTCTGAAGGATGTGCAGCTCAGCTTTCACCTATCCC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGAACGTGGGGATAGGTaGAAGCTGAGCTGCACATCC +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSERGDR*KLSCTS
Trigger: GGATGTGCAGCTCAGCTTTCACCTATCCCCACGTTC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCCCAGAGTGATTATATaGCCTGCCCAAGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYPRVII*PAQGGH
Trigger: GTGACCACCTTGGGCAGGTCATATAATCACTCTGGG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTCCCAGAGTGATTATATaGCCTGCCCAAGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSPRVII*PAQGGH
Trigger: GTGACCACCTTGGGCAGGTCATATAATCACTCTGGG...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATGGGATAGGTGAAAGCTaGGCTGCACATCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYGIGES*AAHPSE
Trigger: CTCTGAAGGATGTGCAGCTCAGCTTTCACCTATCCC...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGGGATAGGTGAAAGCTaGGCTGCACATCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSGIGES*AAHPSE
Trigger: CTCTGAAGGATGTGCAGCTCAGCTTTCACCTATCCC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTGAACGTGGGGATAGGTaGAAGCTGAGCTGCACATCC +
Preference number: 2 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCERGDR*KLSCTS
Trigger: GGATGTGCAGCTCAGCTTTCACCTATCCCCACGTTC...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGC +
Preference number: 2 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLCCSGL*PAEQFS
Trigger: GCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATTTGAGGTTCCTCAGCTaGCCCAGTGCCTATATCTCT +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHLRFLS*PSAYIS
Trigger: AGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAA...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAACAGTCATATCACTGTaGACAAAATTTTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: QVKETNGIYPHGPASLGITVISL*TKFLAV
Trigger: GACTGCCAAAAATTTTGTGCACAGTGATATGACTGT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAAAAAGCCAGATCACCTaGCTCCAAGATGCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGKSQIT*LQDAGH
Trigger: GTGCCCGGCATCTTGGAGGCAGGTGATCTGGCTTTT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTGGAATCTATCCACATaGTCCTGCCTCGTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLWNLST*SCLVGH
Trigger: ATGCCCAACGAGGCAGGACCATGTGGATAGATTCCA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR CAA 90 bp AAGCTCATGAGGAGTCTCATTTCCAAGCTGGAGATCATTTCCAGTTaGAATGAACAATTCTTCTTTTTGGCTTGGGTGAACGTGGGGATA +
Preference number: 2 (lower is better)
Translates to: KLMRSLISKLEIISS*NEQFFFLAWVNVGI
Trigger: TATCCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTCATTCAAACTGGAAATGATCTCCAGCTTGGAAATGAGACTCCTCATGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCTTAGAATAAGCTCATaGGGAGTCTCATTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLRISS*GVSFPS
Trigger: GCTTGGAAATGAGACTCCTCATGAGCTTATTCTAAG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACTGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGC +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYCCSGL*PAEQFS
Trigger: GCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCA...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACAAAAGTGCAGGGGCTTaGAGTCAGAAGAGCTCCGTT +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYKSAGA*SQKSSV
Trigger: AACGGAGCTCTTCTGACTTCAAGCCCCTGCACTTTT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTCCTCCAAACTAACATaGCAATGTGTTTCTGCCATC +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSSSKLT*QCVSAI
Trigger: GATGGCAGAAACACATTGTCATGTTAGTTTGGAGGA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTTGAGGTTCCTCAGCTaGCCCAGTGCCTATATCTCT +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYLRFLS*PSAYIS
Trigger: AGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATCTATCCACATGGTCCTaGCTCGTTGGGCATATATTC +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHLSTWS*LVGHIF
Trigger: GAATATATGCCCAACGAGGCAGGACCATGTGGATAG...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATCAAGATGCCGGGCACTaGACGGCTTTTATCAGTTTT +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHQDAGH*TAFISF
Trigger: AAAACTGATAAAAGCCGTGCAGTGCCCGGCATCTTG...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTGGAATCTATCCACATaGTCCTGCCTCGTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYWNLST*SCLVGH
Trigger: ATGCCCAACGAGGCAGGACCATGTGGATAGATTCCA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATGTCATCTGGAATAGCTaGTACATAGGTGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYVIWNS*YIGGSS
Trigger: GGAGCTGCCACCTATGTACCAGCTATTCCAGATGAC...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCAGATCTAGAAGTGGGTaGGAACAAAAGAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSRSRSG*EQKSRT
Trigger: AGTTCTGCTCTTTTGTTCCCACCCACTTCTAGATCT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACCTATCCACATGGTCCTaGCTCGTTGGGCATATATTC +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYLSTWS*LVGHIF
Trigger: GAATATATGCCCAACGAGGCAGGACCATGTGGATAG...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTAATGTAAACCAGCAGTaGTTCCCTATCTTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSNVNQQ*FPILGL
Trigger: CAGGCCCAAGATAGGGAAGCACTGCTGGTTTACATT...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATTATTCTAGCAGGGCTTaGTCATCTGGAATAGCTGGT +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHYSSRA*SSGIAG
Trigger: ACCAGCTATTCCAGATGACCAAGCCCTGCTAGAATA...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGATGGAAGCTCACTATaGGAATTTAAAAGCAAACTG +
Preference number: 2 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSDGSSL*EFKSKL
Trigger: CAGTTTGCTTTTAAATTCCCATAGTGAGCTTCCATC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCACAGTCATATCACTGTaGACAAAATTTTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSTVISL*TKFLAV
Trigger: GACTGCCAAAAATTTTGTGCACAGTGATATGACTGT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCAAGATGCCGGGCACTaGACGGCTTTTATCAGTTTT +
Preference number: 2 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCQDAGH*TAFISF
Trigger: AAAACTGATAAAAGCCGTGCAGTGCCCGGCATCTTG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCATGACAATGTGTTTCTaGCATCTTAGCTTACAGAGA +
Preference number: 2 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSMTMCF*HLSLQR
Trigger: TCTCTGTAAGCTAAGATGGCAGAAACACATTGTCAT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGATCACTTTGGACATTaGTGGGGGATACATAACAGC +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSDHFGH*WGIHNS
Trigger: GCTGTTATGTATCCCCCAGCAATGTCCAAAGTGATC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAATGTGCACAAAATTTTTaGCAGTCACAAGCTCTAACA +
Preference number: 2 (lower is better)
Translates to: PGTARLLSVFITSGQGNKCAQNF*QSQALT
Trigger: TGTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACA...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACTATTCTAGCAGGGCTTaGTCATCTGGAATAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYYSSRA*SSGIAG
Trigger: ACCAGCTATTCCAGATGACCAAGCCCTGCTAGAATA...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTTCTTCTTTTTGGCTTaGGTGAACGTGGGGATAGGT +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYFFFLA*VNVGIG
Trigger: ACCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGAGTGGGTCTCAAGATaGAAGCTCACTATGGGAATT +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYEWVSR*KLTMGI
Trigger: AATTCCCATAGTGAGCTTCCATCTTGAGACCCACTC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTCACTTTGGACATTGCTaGGGGATACATAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSHFGHC*GIHNSS
Trigger: TGAGCTGTTATGTATCCCCCAGCAATGTCCAAAGTG...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACAACAACAGTAAACAGTaGAATACCTGCAGGCAACCA +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYNNSKQ*NTCRQP
Trigger: TGGTTGCCTGCAGGTATTTCACTGTTTACTGTTGTT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATATGGTCCTGCCTCGTTaGGCATATATTCTAAACATA +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHMVLPR*AYILNI
Trigger: TATGTTTAGAATATATGCCCAACGAGGCAGGACCAT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATGGTCAAGGAAACAAATaGAATCTATCCACATGGTCC +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYGQGNK*NLSTWS
Trigger: GGACCATGTGGATAGATTCCATTTGTTTCCTTGACC...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAACTGGACAATTGCTTaGACTCTAATATCATCATCC +
Preference number: 2 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLNWTIA*TLISSS
Trigger: GGATGATGATATTAGAGTTCAAGCAATTGTCCAGTT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATACAGTCATATCACTGTaGACAAAATTTTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHTVISL*TKFLAV
Trigger: GACTGCCAAAAATTTTGTGCACAGTGATATGACTGT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTATGGTCCTGCCTCGTTaGGCATATATTCTAAACATA +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSMVLPR*AYILNI
Trigger: TATGTTTAGAATATATGCCCAACGAGGCAGGACCAT...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGTAACCTATATCCCTTaGTATGGGAAGGATATCTTA +
Preference number: 2 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSVTYIP*YGKDIL
Trigger: TAAGATATCCTTCCCATATCAAGGGATATAGGTTAC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTGTGCACAAAATTTTTaGCAGTCACAAGCTCTAACA +
Preference number: 2 (lower is better)
Translates to: DIAGGYITAHYNITTHTYCAQNF*QSQALT
Trigger: TGTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGATGGAAGCTCACTATaGGAATTTAAAAGCAAACTG +
Preference number: 2 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYDGSSL*EFKSKL
Trigger: CAGTTTGCTTTTAAATTCCCATAGTGAGCTTCCATC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 72 bp GTGTGGAGGGAGAGGTCCGGACCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACCAAAGCCAAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: VWRERSGPVANC*SCQEATKAKAL
Trigger: AAGAGCCTTGGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCTCCCTCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 72 bp AGGGAGAGGTCCGGACCTGTGGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCCAAGGCTCTTAACATA +
Preference number: 3 (lower is better)
Translates to: RERSGPVANCCS*QEATKAKALNI
Trigger: TATGTTAAGAGCCTTGGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 72 bp GCCAGGAGGCTACCAAAGCCAAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCAGTGCCTATATCTCTA +
Preference number: 3 (lower is better)
Translates to: ARRLPKPRLLTY*GSSAAPVPISL
Trigger: TAGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCTTGGCTTTGGTAGCCTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 72 bp CCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGCATCTCTGGGTCTCAA +
Preference number: 3 (lower is better)
Translates to: PFPFWLCCCSGL*PAEQFSISGSQ
Trigger: TTGAGACCCAGAGATGCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAAAGGCTCTTAACATATaGAGGTTCCTCAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: QVKETNGIYPHGPASLGIKALNI*RFLSCP
Trigger: GGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCTT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGAACAATTCTTCTTTTaGGCTTGGGTGAACGTGGGG +
Preference number: 3 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDEQFFF*AWVNVG
Trigger: CCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCAGTGCTTCCCTATCTaGGGCCTGGCTAGCTTAAAG +
Preference number: 3 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSQCFPI*GLASLK
Trigger: CTTTAAGCTAGCCAGGCCCAAGATAGGGAAGCACTG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACTGTGCACAAAATTTTaGGCAGTCACAAGCTCTAAC +
Preference number: 3 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLCTKF*AVTSSN
Trigger: GTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACAG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACATAGGAGAGAAAAGTTaGCCAAGCGTCTTCTATGGA +
Preference number: 3 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDIGEKS*PSVFYG
Trigger: TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTAT...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGTAGCTCTGATCACTTaGGACATTGCTGGGGGATAC +
Preference number: 3 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSVALIT*DIAGGY
Trigger: GTATCCCCCAGCAATGTCCAAAGTGATCAGAGCTAC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCATGGTCCTGCCTCGTaGGGCATATATTCTAAACAT +
Preference number: 3 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSHGPAS*GIYSKH
Trigger: ATGTTTAGAATATATGCCCAACGAGGCAGGACCATG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCATTCTTCTTTTTGGCTaGGGTGAACGTGGGGATAGG +
Preference number: 3 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSILLFG*GERGDR
Trigger: CCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAAT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGAACAATTCTTCTTTTaGGCTTGGGTGAACGTGGGG +
Preference number: 3 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSEQFFF*AWVNVG
Trigger: CCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAACATGGTCCTGCCTCGTaGGGCATATATTCTAAACAT +
Preference number: 3 (lower is better)
Translates to: PGTARLLSVFITSGQGNKHGPAS*GIYSKH
Trigger: ATGTTTAGAATATATGCCCAACGAGGCAGGACCATG...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTATAGGAGAGAAAAGTTaGCCAAGCGTCTTCTATGGA +
Preference number: 3 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSIGEKS*PSVFYG
Trigger: TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTAT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACATACTTATATCTGTTaGCTCCTCCAAACTAACATG +
Preference number: 3 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKHTYIC*LLQTNM
Trigger: CATGTTAGTTTGGAGGAGCAAACAGATATAAGTATG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAAGAGCTCCCCTATATaGTATCATTCTGAAATGTCC +
Preference number: 3 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSKSSPI*YHSEMS
Trigger: GGACATTTCAGAATGATACAATATAGGGGAGCTCTT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGAACAATTCTTCTTTTaGGCTTGGGTGAACGTGGGG +
Preference number: 3 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLEQFFF*AWVNVG
Trigger: CCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTCTCTGGGTCTCAATTaGTTCATCTGTAGAGCGTGG +
Preference number: 3 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLSLGLN*FICRAW
Trigger: CCACGCTCTACAGATGAACAAATTGAGACCCAGAGA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 72 bp TGCCCCAGTGCCTATATCTCTAACAACAGTAAACAGTaGAATACCTGCAGGCAACCATGTCTAAATAAAGAG +
Preference number: 3 (lower is better)
Translates to: CPSAYISNNSKQ*NTCRQPCLNKE
Trigger: CTCTTTATTTAGACATGGTTGCCTGCAGGTATTTCACTGTTTACTGTTGTTAGAGATATAGGCACTGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 72 bp AGTGAGAGACTTCAGCTTTGGTGTAAAGCTGTCAGCTaGCCTAATCAAGGACAATACACAAAAATTAGACTC +
Preference number: 3 (lower is better)
Translates to: SERLQLWCKAVS*PNQGQYTKIRL
Trigger: GAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACCAAAGCTGAAGTCTCTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR CCA 72 bp TCTGTGTTGAGTGGGTCTCAAGATGGAAGCTCACTATaGGAATTTAAAAGCAAACTGTGGCATCGAAACAAA +
Preference number: 3 (lower is better)
Translates to: SVLSGSQDGSSL*EFKSKLWHRNK
Trigger: TTTGTTTCGATGCCACAGTTTGCTTTTAAATTCCCATAGTGAGCTTCCATCTTGAGACCCACTCAACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATATTCTTCTTTTTGGCTaGGGTGAACGTGGGGATAGG +
Preference number: 3 (lower is better)
Translates to: DIAGGYITAHYNITTHTYILLFG*GERGDR
Trigger: CCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAAT...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTCTCTGGGTCTCAATTaGTTCATCTGTAGAGCGTGG +
Preference number: 3 (lower is better)
Translates to: DIAGGYITAHYNITTHTYSLGLN*FICRAW
Trigger: CCACGCTCTACAGATGAACAAATTGAGACCCAGAGA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCATACTTATATCTGTTaGCTCCTCCAAACTAACATG +
Preference number: 3 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSHTYIC*LLQTNM
Trigger: CATGTTAGTTTGGAGGAGCAAACAGATATAAGTATG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACCTGTGCACAAAATTTTaGGCAGTCACAAGCTCTAAC +
Preference number: 3 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYLCTKF*AVTSSN
Trigger: GTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACAG...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR-3UTR CAA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAAGAGCTCCCCTATATaGTATCATTCTGAAATGTCC +
Preference number: 3 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLKSSPI*YHSEMS
Trigger: GGACATTTCAGAATGATACAATATAGGGGAGCTCTT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR TCA 72 bp CACATACTTATATCTGTTTGCTCCTCCAAACTAACATaGCAATGTGTTTCTGCCATCTTAGCTTACAGAGAC +
Preference number: 3 (lower is better)
Translates to: HILISVCSSKLT*QCVSAILAYRD
Trigger: GTCTCTGTAAGCTAAGATGGCAGAAACACATTGTCATGTTAGTTTGGAGGAGCAAACAGATATAAGTATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR GCA 72 bp ACTTTGATGGTTCACAAGCTCTTCCAGATCTTGTCGTaGCTTAAAGTTCTCACTAACAATATCAATTATCAG +
Preference number: 3 (lower is better)
Translates to: TLMVHKLFQILS*LKVLTNNINYQ
Trigger: CTGATAATTGATATTGTTAGTGAGAACTTTAAGGCACGACAAGATCTGGAAGAGCTTGTGAACCATCAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGACTTGGGACAGGTAGGTaGGGGTCCGGCGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRLGTGR*GSGGPQ
Trigger: CTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAG...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACTCAGGCGGGCCATGTaGCCCGCGAGCTGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGILRRAM*PASCGE
Trigger: CTCTCCGCAGCTCGCGGGTCACATGGCCCGCCTGAG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374848.8
CDS-3UTR TCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCTTGGGACAGGTAGGTaGGGGTCCGGCGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDLGTGR*GSGGPQ
Trigger: CTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGAGCGCGGTTTGGGTGTaGGCCGGAGCCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQSAVWV*AGASPP
Trigger: AGGAGGTGAGGCTCCGGCGCACACCCAAACCGCGCT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGCTGGACAGCAGTGCTaGCCCAGGAGAGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRAGQQC*PRRVAA
Trigger: TGCGGCGACTCTCCTGGGGCAGCACTGCTGTCCAGC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGCCGAGGGCCGCCTCTaGTATTGCCCAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQAEGRL*YCPGWL
Trigger: TAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGC...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCCGGCGGGCCGCAGGTaGCGGGAAGAGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSPAGRR*REEHGW
Trigger: CCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGCTGGGGTGCAACACTaGGAGGCAGGAACCACACTG +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRAGVQH*EAGTTL
Trigger: CAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAAGCGCGGTTTGGGTGTaGGCCGGAGCCTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGISAVWV*AGASPP
Trigger: AGGAGGTGAGGCTCCGGCGCACACCCAAACCGCGCT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGGCCGCCTCTGGTATTaGCCAGGCTGGCTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRGRLWY*PGWLAH
Trigger: ATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAGCCGAGGGCCGCCTCTaGTATTGCCCAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIAEGRL*YCPGWL
Trigger: TAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGC...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGCCTCCGGAGGAGCATaGCAGCTGGAGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQASGGA*QLERLK
Trigger: CTTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGC...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGCGCAGGGCTCCCCTTaGTCAGGCGGGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSAQGSP*SGGPCD
Trigger: GTCACATGGCCCGCCTGAGCAAGGGGAGCCCTGCGC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374848.8
CDS-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACACAGGAAGAGTTGGTaGCCCTCGCACTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKHRKSW*PSHWGP
Trigger: TGGCCCCCAGTGCGAGGGGCACCAACTCTTCCTGTG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAGGCAGTGTGGCTGTGTaGAGGGAGAGGTCCGGACCT +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIGSVAV*RERSGP
Trigger: AGGTCCGGACCTCTCCCTCCACACAGCCACACTGCC...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGTGCACCCTCACTGGGTaGGTCAGACTGCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQCTLTG*VRLHEA
Trigger: TGCCTCATGCAGTCTGACCCACCCAGTGAGGGTGCA...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGATGCACCCTCACTGGGTaGGTCAGACTGCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRCTLTG*VRLHEA
Trigger: TGCCTCATGCAGTCTGACCCACCCAGTGAGGGTGCA...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACTGGGGGCCACATTGCTaGAGAAGCCGGTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDWGPHC*RSRWNW
Trigger: CCAGTTCCACCGGCTTCTTCAGCAATGTGGCCCCCA...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGAACGTGGGGATAGGTaGAAGCTGAGCTGCACATCC +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRERGDR*KLSCTS
Trigger: GGATGTGCAGCTCAGCTTTCACCTATCCCCACGTTC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCACTACGCTCCACGTTaGACAGGAAGAGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQHYAPR*TGRVGA
Trigger: GGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGACACTACGCTCCACGTTaGACAGGAAGAGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRHYAPR*TGRVGA
Trigger: GGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTG...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCCGGCGGGCCGCAGGTaGCGGGAAGAGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLPAGRR*REEHGW
Trigger: CCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCACCTGCCTCCAAGATaGCGGGCACTGCACGGCTTT +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDHLPPR*RALHGF
Trigger: AAAGCCGTGCAGTGCCCGGCATCTTGGAGGCAGGTG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAAAAAGCCAGATCACCTaGCTCCAAGATGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRKSQIT*LQDAGH
Trigger: GTGCCCGGCATCTTGGAGGCAGGTGATCTGGCTTTT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGCCTCCGGAGGAGCATaGCAGCTGGAGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKASGGA*QLERLK
Trigger: CTTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATTGCACAGGAAGAGTTaGTGCCCCTCGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLHRKS*CPSHWG
Trigger: CCCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACGGGAAGAGCATGGCTaGGGTGCAACACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIREEHG*GATLRG
Trigger: GCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACCAGACAATGGGCACTaGGCCATTGGCAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIPDNGH*AIGRGK
Trigger: CTTCCCTCTGCCAATGGCTCAGTGCCCATTGTCTGG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGACCCAGAGTGATTATATaGCCTGCCCAAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRPRVII*PAQGGH
Trigger: GTGACCACCTTGGGCAGGTCATATAATCACTCTGGG...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTCCGGCGGGCCGCAGGTaGCGGGAAGAGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSPAGRR*REEHGW
Trigger: CCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGG...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKANCCS*QEATKA
Trigger: GGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGGGCGCAGCGCGGTTTaGGTGTGCGCCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLGRSAV*VCAGAS
Trigger: TGAGGCTCCGGCGCACACCCAAACCGCGCTGCGCCC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATGGCCTGCCAGACAATaGGCACTGAGCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKWPARQ*ALSHWQ
Trigger: CTGCCAATGGCTCAGTGCCCATTGTCTGGCAGGCCA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAAGGCCCTCTCTCCCTTaGCCCTCAACAGCGAGTACA +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKRPSLP*PSTAST
Trigger: TGTACTCGCTGTTGAGGGCCAAGGGAGAGAGGGCCT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCAGAAAGGCATCTCTTaGCACCCTAGAGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQQKGIS*HPRGDW
Trigger: CCAGTCTCCTCTAGGGTGCCAAGAGATGCCTTTCTG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGTAGGTCTGCAGGGATaGCTCCAGGCAATAGACATA +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRVGLQG*LQAIDI
Trigger: TATGTCTATTGCCTGGAGTCATCCCTGCAGACCTAC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGCATGGGCTCTGGATTaGTGTAGTGCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKAWALD*CSAGAS
Trigger: AGAGGCTCCAGCACTACATCAATCCAGAGCCCATGC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCACAGGAAGAGTTGGTaGCCCTCGCACTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSHRKSW*PSHWGP
Trigger: TGGCCCCCAGTGCGAGGGGCACCAACTCTTCCTGTG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAAGGGCCCCAGCAACATaGCTACACCAACCCATTCCA +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKRAPAT*LHQPIP
Trigger: TGGAATGGGTTGGTGTAGGCATGTTGCTGGGGCCCT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAAGAGCATGGCTGGGGTaGAACACTGAGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKRAWLG*NTERQE
Trigger: TTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAAAAAGCCAGATCACCTaGCTCCAAGATGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIKSQIT*LQDAGH
Trigger: GTGCCCGGCATCTTGGAGGCAGGTGATCTGGCTTTT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAAAAAGCCAGATCACCTaGCTCCAAGATGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKKSQIT*LQDAGH
Trigger: GTGCCCGGCATCTTGGAGGCAGGTGATCTGGCTTTT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGCTAGCTCATCCCGGTaGAGGCGCCATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHASSSR*RRHLRG
Trigger: GCCCCGGAGATGGCGCCTCCACCGGGATGAGCTAGC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGAAGGTGCTCCAAGACTaGGAAGATCTGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQKVLQD*EDLLFW
Trigger: CCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATCACCACTGTTAGGATaGAGAGCTGGACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKSPLLG*RAGQQC
Trigger: GCACTGCTGTCCAGCTCTTCATCCTAACAGTGGTGA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCTTGGGACAGGTAGGTaGGGGTCCGGCGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCLGTGR*GSGGPQ
Trigger: CTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCCCAGAGTGATTATATaGCCTGCCCAAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDPRVII*PAQGGH
Trigger: GTGACCACCTTGGGCAGGTCATATAATCACTCTGGG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGCTGGACAGCAGTGCTaGCCCAGGAGAGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHAGQQC*PRRVAA
Trigger: TGCGGCGACTCTCCTGGGGCAGCACTGCTGTCCAGC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGACAAGATGCCGGGCACTaGACGGCTTTTATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRQDAGH*TAFISF
Trigger: AAAACTGATAAAAGCCGTGCAGTGCCCGGCATCTTG...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGTCAAGGTGTTCCACTaGCAGGCACCAGGAACACTT +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDVKVFH*QAPGTL
Trigger: AAGTGTTCCTGGTGCCTGGCAGTGGAACACCTTGAC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAGGGCGCAGCGCGGTTTaGGTGTGCGCCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGGRSAV*VCAGAS
Trigger: TGAGGCTCCGGCGCACACCCAAACCGCGCTGCGCCC...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGCTAGCTCATCCCGGTaGAGGCGCCATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSASSSR*RRHLRG
Trigger: GCCCCGGAGATGGCGCCTCCACCGGGATGAGCTAGC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGAACTCTTGGCTCATTTaGTTCAGATGCCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQNSWLI*FRCQWR
Trigger: GCGCCATTGGCATCTGAACCAAATGAGCCAAGAGTT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGCACAGGAAGAGTTaGTGCCCCTCGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLHRKS*CPSHWG
Trigger: CCCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAATTGCACAGGAAGAGTTaGTGCCCCTCGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKLHRKS*CPSHWG
Trigger: CCCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAA...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCGGGAAGAGCATGGCTaGGGTGCAACACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSREEHG*GATLRG
Trigger: GCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAGGCCCTCTCTCCCTTaGCCCTCAACAGCGAGTACA +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSRPSLP*PSTAST
Trigger: TGTACTCGCTGTTGAGGGCCAAGGGAGAGAGGGCCT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCAGAAAGGCATCTCTTaGCACCCTAGAGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDQKGIS*HPRGDW
Trigger: CCAGTCTCCTCTAGGGTGCCAAGAGATGCCTTTCTG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGATGTCCAAAGACAACTaGCAGAGTTCACTCCATGGG +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQMSKDN*QSSLHG
Trigger: CCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACAT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCCAGACAATGGGCACTaGGCCATTGGCAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSPDNGH*AIGRGK
Trigger: CTTCCCTCTGCCAATGGCTCAGTGCCCATTGTCTGG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGATAAAGGGCATCTCTaGGATGTGGCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKDKGHL*DVAQRS
Trigger: GCTTCTCTGAGCCACATCTCAGAGATGCCCTTTATC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGATAAAGGGCATCTCTaGGATGTGGCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDDKGHL*DVAQRS
Trigger: GCTTCTCTGAGCCACATCTCAGAGATGCCCTTTATC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGCTGGACAGCAGTGCTaGCCCAGGAGAGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSAGQQC*PRRVAA
Trigger: TGCGGCGACTCTCCTGGGGCAGCACTGCTGTCCAGC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAGAGCTGGACAGCAGTaGTGCCCCAGGAGAGTCGCC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLRAGQQ*CPRRVA
Trigger: GGCGACTCTCCTGGGGCAGCACTGCTGTCCAGCTCT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACCCTCTTTCAAGCTTTaGTGCAGGAACTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKPSFKL*CRNSWL
Trigger: GAGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGAGGG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACCCTCTTTCAAGCTTTaGTGCAGGAACTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIPSFKL*CRNSWL
Trigger: GAGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGAGGG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAGGGCCCCAGCAACATaGCTACACCAACCCATTCCA +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSRAPAT*LHQPIP
Trigger: TGGAATGGGTTGGTGTAGGCATGTTGCTGGGGCCCT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAGCTCCACCAGACCCATaGTATACAGGGAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIAPPDP*YTGRRR
Trigger: TCTTCTTCTCCCTGTATAGCATGGGTCTGGTGGAGC...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATATTGAGGTTCCTCAGCTaGCCCAGTGCCTATATCTCT +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGILRFLS*PSAYIS
Trigger: AGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAA...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGATCACTTTGGACATTaGTGGGGGATACATAACAGC +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRDHFGH*WGIHNS
Trigger: GCTGTTATGTATCCCCCAGCAATGTCCAAAGTGATC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCAGAAGCCGGTGGAACTaGGACACAACCTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSRSRWN*DTTCRT
Trigger: CGTCCTGCAGGTTGTGTCCCAGTTCCACCGGCTTCT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGAAGATCTGCTCTTCTaGTACAGCATCGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNREDLLF*YSIVFY
Trigger: GTAGAAGACGATGCTGTACCAGAAGAGCAGATCTTC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAGGCATCTCTGAGATGTaGCTCAGAGAAGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKGISEM*LREASP
Trigger: CGGGCTCGCTTCTCTGAGCCACATCTCAGAGATGCC...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCACCCTAGAGGAGACTaGGATGAAAGTTGTACCGGA +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDHPRGD*DESCTG
Trigger: TCCGGTACAACTTTCATCCCAGTCTCCTCTAGGGTG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGAGTGGGTCTCAAGATaGAAGCTCACTATGGGAATT +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNREWVSR*KLTMGI
Trigger: AATTCCCATAGTGAGCTTCCATCTTGAGACCCACTC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
3UTR CAA 72 bp AAGAGCAGAAATGTAAACCAGCAGTGCTTCCCTATCTaGGGCCTGGCTAGCTTAAAGGGGCTCTACTGTCAT +
Preference number: 4 (lower is better)
Translates to: KSRNVNQQCFPI*GLASLKGLYCH
Trigger: ATGACAGTAGAGCCCCTTTAAGCTAGCCAGGCCCAAGATAGGGAAGCACTGCTGGTTTACATTTCTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAAGGTTGAAGTGCTCATaGGGTCAACTTTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRRLKCS*GQLLFM
Trigger: CATGAACAAAAGTTGACCTCATGAGCACTTCAACCT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGCATGGGCTCTGGATTaGTGTAGTGCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSAWALD*CSAGAS
Trigger: AGAGGCTCCAGCACTACATCAATCCAGAGCCCATGC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGCTGGGGTGCAACACTaGGAGGCAGGAACCACACTG +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHAGVQH*EAGTTL
Trigger: CAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGAACAACAGTAAACAGTaGAATACCTGCAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQNNSKQ*NTCRQP
Trigger: TGGTTGCCTGCAGGTATTTCACTGTTTACTGTTGTT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGTGGGTCAGACTGCATaGGGCAGTGTGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLVGQTA*GSVAVW
Trigger: CCACACAGCCACACTGCCTCATGCAGTCTGACCCAC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGGGATAGGTGAAAGCTaGGCTGCACATCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSGIGES*AAHPSE
Trigger: CTCTGAAGGATGTGCAGCTCAGCTTTCACCTATCCC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAGAACGTGGGGATAGGTaGAAGCTGAGCTGCACATCC +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKERGDR*KLSCTS
Trigger: GGATGTGCAGCTCAGCTTTCACCTATCCCCACGTTC...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCTTAGAATAAGCTCATaGGGAGTCTCATTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQLRISS*GVSFPS
Trigger: GCTTGGAAATGAGACTCCTCATGAGCTTATTCTAAG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGTCCTCCAAACTAACATaGCAATGTGTTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQSSKLT*QCVSAI
Trigger: GATGGCAGAAACACATTGTCATGTTAGTTTGGAGGA...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACTCCCACTTCACGGAATaGAATGTGAAGTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDSHFTE*NVKSTW
Trigger: CCAAGTGGACTTCACATTTCATTCCGTGAAGTGGGA...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR GCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGTCTTTCAAGCTTTGCTaGAGGAACTCTTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQSFKLC*RNSWLI
Trigger: AATGAGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGA...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCACAGGAAGAGTTGGTaGCCCTCGCACTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYHRKSW*PSHWGP
Trigger: TGGCCCCCAGTGCGAGGGGCACCAACTCTTCCTGTG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACAAGACTGGGAAGATCTaGTCTTCTGGTACAGCATCG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDKTGKI*SSGTAS
Trigger: CGATGCTGTACCAGAAGAGCAGATCTTCCCAGTCTT...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAAGAGCATGGCTGGGGTaGAACACTGAGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKRAWLG*NTERQE
Trigger: TTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTACAGTGCCATGTCCTTaGCAAAGCCCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSTVPCP*QSPCGS
Trigger: ACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLPVANC*SCQEAT
Trigger: GGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACTATCCACATGGTCCTaGCTCGTTGGGCATATATTC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGILSTWS*LVGHIF
Trigger: GAATATATGCCCAACGAGGCAGGACCATGTGGATAG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCACCTGCCTCCAAGATaGCGGGCACTGCACGGCTTT +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLHLPPR*RALHGF
Trigger: AAAGCCGTGCAGTGCCCGGCATCTTGGAGGCAGGTG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATCACCTGCCTCCAAGATaGCGGGCACTGCACGGCTTT +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHHLPPR*RALHGF
Trigger: AAAGCCGTGCAGTGCCCGGCATCTTGGAGGCAGGTG...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACAATGTAAACCAGCAGTaGTTCCCTATCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDNVNQQ*FPILGL
Trigger: CAGGCCCAAGATAGGGAAGCACTGCTGGTTTACATT...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGCCTCCGGAGGAGCATaGCAGCTGGAGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLASGGA*QLERLK
Trigger: CTTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTTTGCCAAAGCCCTTGTaGCAGTACACTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSLPKPL*QYTWDR
Trigger: CCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAA...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAGAGGTCCGGACCTGTaGCAAACTGCTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLRGPDL*QTAAPA
Trigger: GGCAGGAGCAGCAGTTTGCCACAGGTCCGGACCTCT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGTCAAGGAAACAAATaGAATCTATCCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQGQGNK*NLSTWS
Trigger: GGACCATGTGGATAGATTCCATTTGTTTCCTTGACC...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGCAGAGTTCACTCCATaGGGAAAAGGCATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDAEFTP*GKGMLV
Trigger: CACTAACATGCCTTTTCCCCATGGAGTGAACTCTGC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTGACTGCTTTGCCGGTTaGGGCGACCAGCTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCDCFAG*GDQLGP
Trigger: GGGACCGAGCTGGTCGCCCCAACCGGCAAAGCAGTC...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374847.5
CDS-3UTR CCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACTAGGACACAGGAGCTaGGATCAGATCCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGILGHRS*DQILHS
Trigger: TGAATGAAGGATCTGATCCCAGCTCCTGTGTCCTAG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374847.5
CDS-3UTR TCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTGGGGGCCACATTGCTaGAGAAGCCGGTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYWGPHC*RSRWNW
Trigger: CCAGTTCCACCGGCTTCTTCAGCAATGTGGCCCCCA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGCTGGGGTGCAACACTaGGAGGCAGGAACCACACTG +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYAGVQH*EAGTTL
Trigger: CAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTTGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSCCSGL*PAEQFS
Trigger: GCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCA...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGGCCGCCTCTGGTATTaGCCAGGCTGGCTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYGRLWY*PGWLAH
Trigger: ATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAGAGCTGGACAGCAGTaGTGCCCCAGGAGAGTCGCC +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCRAGQQ*CPRRVA
Trigger: GGCGACTCTCCTGGGGCAGCACTGCTGTCCAGCTCT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCACAGTGCCATGTCCTTaGCAAAGCCCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSTVPCP*QSPCGS
Trigger: ACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCAACAGCGAGTACAGTaGCATGTCCTTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSQQRVQ*HVLAKA
Trigger: GGCTTTGGCAAGGACATGGCACTGTACTCGCTGTTG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGATCACTTTGGACATTaGTGGGGGATACATAACAGC +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDDHFGH*WGIHNS
Trigger: GCTGTTATGTATCCCCCAGCAATGTCCAAAGTGATC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACTTCTCCCTAGCCCCTTaGTTAGGATTAAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDFSLAP*LGLSER
Trigger: TCTCTCACTTAATCCTAAGCAAGGGGCTAGGGAGAA...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATGAAATCAAACCCGGTTaGGGCGACCAGCTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYEIKPG*GDQLGP
Trigger: GGGACCGAGCTGGTCGCCCCAACCGGGTTTGATTTC...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374848.8
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGAAGATCTGCTCTTCTaGTACAGCATCGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKEDLLF*YSIVFY
Trigger: GTAGAAGACGATGCTGTACCAGAAGAGCAGATCTTC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGGCATCTCTGAGATGTaGCTCAGAGAAGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHGISEM*LREASP
Trigger: CGGGCTCGCTTCTCTGAGCCACATCTCAGAGATGCC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGGCATCTCTGAGATGTaGCTCAGAGAAGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLGISEM*LREASP
Trigger: CGGGCTCGCTTCTCTGAGCCACATCTCAGAGATGCC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGTGCCGGGAAGAGCATaGCTGGGGTGCAACACTGAG +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYVPGRA*LGCNTE
Trigger: CTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCAC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGCCAAAGCCCTTGTaGCAGTACACTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLPKPL*QYTWDR
Trigger: CCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCACCCTAGAGGAGACTaGGATGAAAGTTGTACCGGA +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSHPRGD*DESCTG
Trigger: TCCGGTACAACTTTCATCCCAGTCTCCTCTAGGGTG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGAGTGGGTCTCAAGATaGAAGCTCACTATGGGAATT +
Preference number: 4 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDEWVSR*KLTMGI
Trigger: AATTCCCATAGTGAGCTTCCATCTTGAGACCCACTC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGGCAGCTGGAGAGGTTaGAGTGCTCATGAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLGSWRG*SAHEVN
Trigger: GTTGACCTCATGAGCACTTCAACCTCTCCAGCTGCC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTCCAGACAATGGGCACTaGGCCATTGGCAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSPDNGH*AIGRGK
Trigger: CTTCCCTCTGCCAATGGCTCAGTGCCCATTGTCTGG...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKRLLTY*GSSAAP
Trigger: TGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTGTGGGTCAGACTGCATaGGGCAGTGTGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCVGQTA*GSVAVW
Trigger: CCACACAGCCACACTGCCTCATGCAGTCTGACCCAC...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATACTTAGAATAAGCTCATaGGGAGTCTCATTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGILRISS*GVSFPS
Trigger: GCTTGGAAATGAGACTCCTCATGAGCTTATTCTAAG...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAATGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKCCSGL*PAEQFS
Trigger: GCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCA...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCAAAAGTGCAGGGGCTTaGAGTCAGAAGAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSKSAGA*SQKSSV
Trigger: AACGGAGCTCTTCTGACTTCAAGCCCCTGCACTTTT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATATTAAACTCTGAAAGGTaGGTGAGCCTGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGILNSER*VSLLRD
Trigger: GTCTCTTAACAGGCTCACTCACCTTTCAGAGTTTAA...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCACTACGCTCCACGTTaGACAGGAAGAGTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLHYAPR*TGRVGA
Trigger: GGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAAGACTGGGAAGATCTaGTCTTCTGGTACAGCATCG +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSKTGKI*SSGTAS
Trigger: CGATGCTGTACCAGAAGAGCAGATCTTCCCAGTCTT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSANCCS*QEATKA
Trigger: GGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACCTGTGGCAAACTGCTaGTCCTGCCAGGAGGCTACC +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGPVANC*SCQEAT
Trigger: GGTAGCCTCCTGGCAGGAGCAGCAGTTTGCCACAGG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGATGACAATGTGTTTCTaGCATCTTAGCTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQMTMCF*HLSLQR
Trigger: TCTCTGTAAGCTAAGATGGCAGAAACACATTGTCAT...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTCAAGATTAGATGACTaGTTTGCCGGTTGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSSRLDD*FAGWGD
Trigger: GTCGCCCCAACCGGCAAAGCAGTCATCTAATCTTGA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374847.5
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTTGCTGCAGGAACTCTTaGCTCATTTGGTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSCCRNS*LIWFRC
Trigger: GCATCTGAACCAAATGAGCCAAGAGTTCCTGCAGCA...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTGGCCTGCCAGACAATaGGCACTGAGCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYWPARQ*ALSHWQ
Trigger: CTGCCAATGGCTCAGTGCCCATTGTCTGGCAGGCCA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACAGAAGCCGGTGGAACTaGGACACAACCTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYRSRWN*DTTCRT
Trigger: CGTCCTGCAGGTTGTGTCCCAGTTCCACCGGCTTCT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAAAGGTGCTCCAAGACTaGGAAGATCTGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKKVLQD*EDLLFW
Trigger: CCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCGGGAAGAGCATGGCTaGGGTGCAACACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCREEHG*GATLRG
Trigger: GCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAGTGCCGGGAAGAGCATaGCTGGGGTGCAACACTGAG +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGVPGRA*LGCNTE
Trigger: CTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCAC...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATAGGCCCTCTCTCCCTTaGCCCTCAACAGCGAGTACA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYRPSLP*PSTAST
Trigger: TGTACTCGCTGTTGAGGGCCAAGGGAGAGAGGGCCT...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGGTCAAGGAAACAAATaGAATCTATCCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKGQGNK*NLSTWS
Trigger: GGACCATGTGGATAGATTCCATTTGTTTCCTTGACC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGCAGAGTTCACTCCATaGGGAAAAGGCATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSAEFTP*GKGMLV
Trigger: CACTAACATGCCTTTTCCCCATGGAGTGAACTCTGC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTATGTCCAAAGACAACTaGCAGAGTTCACTCCATGGG +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSMSKDN*QSSLHG
Trigger: CCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACAT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGGCAGCTGGAGAGGTTaGAGTGCTCATGAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYGSWRG*SAHEVN
Trigger: GTTGACCTCATGAGCACTTCAACCTCTCCAGCTGCC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTCACCACTGTTAGGATaGAGAGCTGGACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLSPLLG*RAGQQC
Trigger: GCACTGCTGTCCAGCTCTTCATCCTAACAGTGGTGA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATTCACCACTGTTAGGATaGAGAGCTGGACAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHSPLLG*RAGQQC
Trigger: GCACTGCTGTCCAGCTCTTCATCCTAACAGTGGTGA...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATGCATGGGCTCTGGATTaGTGTAGTGCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYAWALD*CSAGAS
Trigger: AGAGGCTCCAGCACTACATCAATCCAGAGCCCATGC...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGGGATAGGTGAAAGCTaGGCTGCACATCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLGIGES*AAHPSE
Trigger: CTCTGAAGGATGTGCAGCTCAGCTTTCACCTATCCC...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATTGTTTCCCTGGTGTTaGCCATCTTACTTCATTTAC +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLFPWC*PSYFIY
Trigger: GTAAATGAAGTAAGATGGTCAACACCAGGGAAACAA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATAGGGCCCCAGCAACATaGCTACACCAACCCATTCCA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYRAPAT*LHQPIP
Trigger: TGGAATGGGTTGGTGTAGGCATGTTGCTGGGGCCCT...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATAGAGCATGGCTGGGGTaGAACACTGAGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYRAWLG*NTERQE
Trigger: TTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCT...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCAACAGCGAGTACAGTaGCATGTCCTTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLQQRVQ*HVLAKA
Trigger: GGCTTTGGCAAGGACATGGCACTGTACTCGCTGTTG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAGCAAACTGCTGCTCCTaGCAGGAGGCTACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGANCCS*QEATKA
Trigger: GGCTTTGGTAGCCTCCTGGCAGGAGCAGCAGTTTGC...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCTATCCACATGGTCCTaGCTCGTTGGGCATATATTC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLSTWS*LVGHIF
Trigger: GAATATATGCCCAACGAGGCAGGACCATGTGGATAG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTTTCTCCCTAGCCCCTTaGTTAGGATTAAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSFSLAP*LGLSER
Trigger: TCTCTCACTTAATCCTAAGCAAGGGGCTAGGGAGAA...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATATCACAGACATGTCTATaGAATACACTCAGTCACAAG +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGISQTCL*NTLSHK
Trigger: CTTGTGACTGAGTGTATTGCATAGACATGTCTGTGA...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTGGTATTGCCCAGGCTaGCTAGCTCATCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCWYCPG*LAHPGG
Trigger: TCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAAACTCTTGGCTCATTTaGTTCAGATGCCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKNSWLI*FRCQWR
Trigger: GCGCCATTGGCATCTGAACCAAATGAGCCAAGAGTT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTGGCCTGCCAGACAATaGGCACTGAGCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCWPARQ*ALSHWQ
Trigger: CTGCCAATGGCTCAGTGCCCATTGTCTGGCAGGCCA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTGCCCTCATAGCGATTaGCCACAGGGACATACTTGG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLCPHSD*PQGHTW
Trigger: CCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAGGCCAGCTAAACCCTaGGCGGCTGGCAAACCTCAT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCRPAKP*AAGKPH
Trigger: ATGAGGTTTGCCAGCCGCCCAGGGTTTAGCTGGCCT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATCAGAAAGGCATCTCTTaGCACCCTAGAGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHQKGIS*HPRGDW
Trigger: CCAGTCTCCTCTAGGGTGCCAAGAGATGCCTTTCTG...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGGAGGAATGAAGGAGTaGGATCTGAACATTGTAATA +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKGGMKE*DLNIVI
Trigger: TATTACAATGTTCAGATCCCACTCCTTCATTCCTCC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAGGAGGAATGAAGGAGTaGGATCTGAACATTGTAATA +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGIGGMKE*DLNIVI
Trigger: TATTACAATGTTCAGATCCCACTCCTTCATTCCTCC...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGATAAAGGGCATCTCTaGGATGTGGCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHDKGHL*DVAQRS
Trigger: GCTTCTCTGAGCCACATCTCAGAGATGCCCTTTATC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATAGGCTCTTAACATATTaGGGTTCCTCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHRLLTY*GSSAAP
Trigger: TGGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAAACTGGACAATTGCTTaGACTCTAATATCATCATCC +
Preference number: 4 (lower is better)
Translates to: QVKETNGIYPHGPASLGINWTIA*TLISSS
Trigger: GGATGATGATATTAGAGTTCAAGCAATTGTCCAGTT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAAAAGTGCAGGGGCTTaGAGTCAGAAGAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLKSAGA*SQKSSV
Trigger: AACGGAGCTCTTCTGACTTCAAGCCCCTGCACTTTT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTTTAAACTCTGAAAGGTaGGTGAGCCTGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSLNSER*VSLLRD
Trigger: GTCTCTTAACAGGCTCACTCACCTTTCAGAGTTTAA...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATACAGTGCCATGTCCTTaGCAAAGCCCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYTVPCP*QSPCGS
Trigger: ACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGT...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACCAACAGCGAGTACAGTaGCATGTCCTTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYQQRVQ*HVLAKA
Trigger: GGCTTTGGCAAGGACATGGCACTGTACTCGCTGTTG...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAGATTCTCTTGGTTCTaGTCACCCCTATGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLRFSWF*SPLCGR
Trigger: GCGACCACATAGGGGTGAGCAGAACCAAGAGAATCT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCACTTGGAGAGCAACTTaGCATCAAAATGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSTWRAT*HQNGSH
Trigger: GTGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTGCCCTCATAGCGATTaGCCACAGGGACATACTTGG +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYCPHSD*PQGHTW
Trigger: CCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCTTTCTCAAACGAGTTaGTCGAAGGGTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLSQTS*SKGHHH
Trigger: ATGGTGATGACCCTTCGACCAACTCGTTTGAGAAAG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGAAGATCTGCTCTTCTaGTACAGCATCGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSEDLLF*YSIVFY
Trigger: GTAGAAGACGATGCTGTACCAGAAGAGCAGATCTTC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATGTGCACAAAATTTTTaGCAGTCACAAGCTCTAACA +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKCAQNF*QSQALT
Trigger: TGTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATTGGAATCTATCCACATaGTCCTGCCTCGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHWNLST*SCLVGH
Trigger: ATGCCCAACGAGGCAGGACCATGTGGATAGATTCCA...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCTTCTTTTTGGCTTaGGTGAACGTGGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSFFFLA*VNVGIG
Trigger: ACCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAGATCTAGAAGTGGGTaGGAACAAAAGAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSRSRSG*EQKSRT
Trigger: AGTTCTGCTCTTTTGTTCCCACCCACTTCTAGATCT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTAATGTGAAGTCCACTTaGGGCCAGTTAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSNVKST*GQLILS
Trigger: GGAAAGAATTAACTGGCCCCAAGTGGACTTCACATT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTCTAACACTCAAGTGTaGGTTGAAGTTAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSSNTQV*VEVRGD
Trigger: GTCACCCCTAACTTCAACCCACACTTGAGTGTTAGA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGTAGGTCTGCAGGGATaGCTCCAGGCAATAGACATA +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSVGLQG*LQAIDI
Trigger: TATGTCTATTGCCTGGAGTCATCCCTGCAGACCTAC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAAACAACAGTAAACAGTaGAATACCTGCAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKNNSKQ*NTCRQP
Trigger: TGGTTGCCTGCAGGTATTTCACTGTTTACTGTTGTT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTTGCTGTTCAGGTTTGTaGCCTGCAGAGCAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSCCSGL*PAEQFS
Trigger: GCTAAACTGCTCTGCAGGTCACAAACCTGAACAGCA...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGCTTAGGATTAAGTaGGAGACTTCAGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLLRIK*ETSALV
Trigger: CACCAAAGCTGAAGTCTCTCACTTAATCCTAAGCAA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAAACTCTGAAAGGTaGGTGAGCCTGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLNSER*VSLLRD
Trigger: GTCTCTTAACAGGCTCACTCACCTTTCAGAGTTTAA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATCATAATCATCCTCAGTaGCCTCATAGCGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHHNHPQ*PHSDWP
Trigger: TGGCCAATCGCTATGAGGGCACTGAGGATGATTATG...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGCTCCACCAGACCCATaGTATACAGGGAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYAPPDP*YTGRRR
Trigger: TCTTCTTCTCCCTGTATAGCATGGGTCTGGTGGAGC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGCTCCACCAGACCCATaGTATACAGGGAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSAPPDP*YTGRRR
Trigger: TCTTCTTCTCCCTGTATAGCATGGGTCTGGTGGAGC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATAACTCTTGGCTCATTTaGTTCAGATGCCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHNSWLI*FRCQWR
Trigger: GCGCCATTGGCATCTGAACCAAATGAGCCAAGAGTT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCCACAGGGACATACTTaGAGAGCAACTTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLPQGHT*RATWHQ
Trigger: TTGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGATGCCCTCATAGCGATTaGCCACAGGGACATACTTGG +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGCPHSD*PQGHTW
Trigger: CCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCA...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACAAGGTGCTCCAAGACTaGGAAGATCTGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYKVLQD*EDLLFW
Trigger: CCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTATGGTCCTGCCTCGTTaGGCATATATTCTAAACATA +
Preference number: 4 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSMVLPR*AYILNI
Trigger: TATGTTTAGAATATATGCCCAACGAGGCAGGACCAT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGTCATCTGGAATAGCTaGTACATAGGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYVIWNS*YIGGSS
Trigger: GGAGCTGCCACCTATGTACCAGCTATTCCAGATGAC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATATGTCCAAAGACAACTaGCAGAGTTCACTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHMSKDN*QSSLHG
Trigger: CCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACAT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAACTATATCCCTTGATATaGGAAGGATATCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLYPLI*EGYLSS
Trigger: AGAACTAAGATATCCTTCCCATATCAAGGGATATAG...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTCCCTGAGATTCTCTTaGTTCTGCTCACCCCTATGT +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLSLRFS*FCSPLC
Trigger: ACATAGGGGTGAGCAGAACCAAGAGAATCTCAGGGA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTGTAGGTCTGCAGGGATaGCTCCAGGCAATAGACATA +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCVGLQG*LQAIDI
Trigger: TATGTCTATTGCCTGGAGTCATCCCTGCAGACCTAC...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAAAAAGTGCAGGGGCTTaGAGTCAGAAGAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGKSAGA*SQKSSV
Trigger: AACGGAGCTCTTCTGACTTCAAGCCCCTGCACTTTT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTTCATTCAAGATTAGATaGCTGCTTTGCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSSFKIR*LLCRLG
Trigger: CCCCAACCGGCAAAGCAGTCATCTAATCTTGAATGA...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374847.5
CDS-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTTGAGGTTCCTCAGCTaGCCCAGTGCCTATATCTCT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCLRFLS*PSAYIS
Trigger: AGAGATATAGGCACTGGGGCAGCTGAGGAACCTCAA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCAAGATGCCGGGCACTaGACGGCTTTTATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYQDAGH*TAFISF
Trigger: AAAACTGATAAAAGCCGTGCAGTGCCCGGCATCTTG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGATCACTTTGGACATTaGTGGGGGATACATAACAGC +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHDHFGH*WGIHNS
Trigger: GCTGTTATGTATCCCCCAGCAATGTCCAAAGTGATC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTTGCTGCAGGAACTCTTaGCTCATTTGGTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSCCRNS*LIWFRC
Trigger: GCATCTGAACCAAATGAGCCAAGAGTTCCTGCAGCA...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCCACAGGGACATACTTaGAGAGCAACTTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYPQGHT*RATWHQ
Trigger: TTGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCACCCTAGAGGAGACTaGGATGAAAGTTGTACCGGA +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCHPRGD*DESCTG
Trigger: TCCGGTACAACTTTCATCCCAGTCTCCTCTAGGGTG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTGGAATCTATCCACATaGTCCTGCCTCGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCWNLST*SCLVGH
Trigger: ATGCCCAACGAGGCAGGACCATGTGGATAGATTCCA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAGTCATCTGGAATAGCTaGTACATAGGTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGVIWNS*YIGGSS
Trigger: GGAGCTGCCACCTATGTACCAGCTATTCCAGATGAC...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTTCTTCTTTTTGGCTTaGGTGAACGTGGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLFFFLA*VNVGIG
Trigger: ACCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACTGCTCACCCCTATGTaGTCGCTCCATTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGLLTPM*SLHSQE
Trigger: TTCTTGAGAATGGAGCGACCACATAGGGGTGAGCAG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR TCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTAGGTTGAAGTGCTCATaGGGTCAACTTTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLRLKCS*GQLLFM
Trigger: CATGAACAAAAGTTGACCTCATGAGCACTTCAACCT...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGTAACCTATATCCCTTaGTATGGGAAGGATATCTTA +
Preference number: 4 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSVTYIP*YGKDIL
Trigger: TAAGATATCCTTCCCATATCAAGGGATATAGGTTAC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACTCCATTCTCAAGAATaGTCTCAGGAAGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGLHSQE*SQEASN
Trigger: GTTGGAGGCTTCCTGAGATCATTCTTGAGAATGGAG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCATAATCATCCTCAGTaGCCTCATAGCGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCHNHPQ*PHSDWP
Trigger: TGGCCAATCGCTATGAGGGCACTGAGGATGATTATG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACATAATCATCCTCAGTaGCCTCATAGCGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGHNHPQ*PHSDWP
Trigger: TGGCCAATCGCTATGAGGGCACTGAGGATGATTATG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAATGTAAACCAGCAGTaGTTCCCTATCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCNVNQQ*FPILGL
Trigger: CAGGCCCAAGATAGGGAAGCACTGCTGGTTTACATT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTTCTCCCTAGCCCCTTaGTTAGGATTAAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYFSLAP*LGLSER
Trigger: TCTCTCACTTAATCCTAAGCAAGGGGCTAGGGAGAA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTGCTGCAGGAACTCTTaGCTCATTTGGTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCCCRNS*LIWFRC
Trigger: GCATCTGAACCAAATGAGCCAAGAGTTCCTGCAGCA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACACTTGGAGAGCAACTTaGCATCAAAATGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYTWRAT*HQNGSH
Trigger: GTGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACCACAGGGACATACTTaGAGAGCAACTTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGPQGHT*RATWHQ
Trigger: TTGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTATTCTAGCAGGGCTTaGTCATCTGGAATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYYSSRA*SSGIAG
Trigger: ACCAGCTATTCCAGATGACCAAGCCCTGCTAGAATA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACTTCTTCTTTTTGGCTTaGGTGAACGTGGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYFFFLA*VNVGIG
Trigger: ACCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAA...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAGATGGAAGCTCACTATaGGAATTTAAAAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKDGSSL*EFKSKL
Trigger: CAGTTTGCTTTTAAATTCCCATAGTGAGCTTCCATC...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCACTTTGGACATTGCTaGGGGATACATAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYHFGHC*GIHNSS
Trigger: TGAGCTGTTATGTATCCCCCAGCAATGTCCAAAGTG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTGCAGAGTTCACTCCATaGGGAAAAGGCATGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCAEFTP*GKGMLV
Trigger: CACTAACATGCCTTTTCCCCATGGAGTGAACTCTGC...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTTAGAATCTAGTGGATaGAAATGCGGGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCLESSG*KCGVWG
Trigger: CCCCCAAACCCCGCATTTCCATCCACTAGATTCTAA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
3UTR CAA 72 bp AGGAGTCTCATTTCCAAGCTGGAGATCATTTCCAGTTaGAATGAACAATTCTTCTTTTTGGCTTGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RSLISKLEIISS*NEQFFFLAWVN
Trigger: GTTCACCCAAGCCAAAAAGAAGAATTGTTCATTCAAACTGGAAATGATCTCCAGCTTGGAAATGAGACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTCCTCCAAACTAACATaGCAATGTGTTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYSSKLT*QCVSAI
Trigger: GATGGCAGAAACACATTGTCATGTTAGTTTGGAGGA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATAAAATCCCCAACATCTaGAATTCCTCAAATCCCTCA +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHKIPNI*NSSNPS
Trigger: TGAGGGATTTGAGGAATTTCAGATGTTGGGGATTTT...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACTCTTTCAAGCTTTGCTaGAGGAACTCTTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYSFKLC*RNSWLI
Trigger: AATGAGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGA...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAACTTGGAGAGCAACTTaGCATCAAAATGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGTWRAT*HQNGSH
Trigger: GTGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCTTTCTCAAACGAGTTaGTCGAAGGGTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCLSQTS*SKGHHH
Trigger: ATGGTGATGACCCTTCGACCAACTCGTTTGAGAAAG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACTTTCTCAAACGAGTTaGTCGAAGGGTCATCACCAT +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGLSQTS*SKGHHH
Trigger: ATGGTGATGACCCTTCGACCAACTCGTTTGAGAAAG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGGTCAAGGAAACAAATaGAATCTATCCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSGQGNK*NLSTWS
Trigger: GGACCATGTGGATAGATTCCATTTGTTTCCTTGACC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTCACGTCGTTAGGCCATaGCAGAGATCTGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSHVVRP*QRSEIK
Trigger: TTTTATTTCAGATCTCTGCCATGGCCTAACGACGTG...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCACTTTGGACATTGCTaGGGGATACATAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCHFGHC*GIHNSS
Trigger: TGAGCTGTTATGTATCCCCCAGCAATGTCCAAAGTG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACACTTTGGACATTGCTaGGGGATACATAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGHFGHC*GIHNSS
Trigger: TGAGCTGTTATGTATCCCCCAGCAATGTCCAAAGTG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAACTATATCCCTTGATATaGGAAGGATATCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGTARLLSVFITSGQGNKLYPLI*EGYLSS
Trigger: AGAACTAAGATATCCTTCCCATATCAAGGGATATAG...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGATTGCTTAGGATTAAGTaGGAGACTTCAGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGLLRIK*ETSALV
Trigger: CACCAAAGCTGAAGTCTCTCACTTAATCCTAAGCAA...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTCTTTCAAGCTTTGCTaGAGGAACTCTTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCSFKLC*RNSWLI
Trigger: AATGAGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACATGGTCCTGCCTCGTTaGGCATATATTCTAAACATA +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYMVLPR*AYILNI
Trigger: TATGTTTAGAATATATGCCCAACGAGGCAGGACCAT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGATGGAAGCTCACTATaGGAATTTAAAAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHDGSSL*EFKSKL
Trigger: CAGTTTGCTTTTAAATTCCCATAGTGAGCTTCCATC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGGAGGAATGAAGGAGTaGGATCTGAACATTGTAATA +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYGGMKE*DLNIVI
Trigger: TATTACAATGTTCAGATCCCACTCCTTCATTCCTCC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAGATCTAGAAGTGGGTaGGAACAAAAGAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCRSRSG*EQKSRT
Trigger: AGTTCTGCTCTTTTGTTCCCACCCACTTCTAGATCT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAAGATCTAGAAGTGGGTaGGAACAAAAGAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGRSRSG*EQKSRT
Trigger: AGTTCTGCTCTTTTGTTCCCACCCACTTCTAGATCT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCGTTTATCTTTTCCCTaGACAATTTCTTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLRLSFP*TISCSQ
Trigger: TTGGGAACAAGAAATTGTCCAGGGAAAAGATAAACG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAGATCAGAGACTGATTaGCGTTTATCTTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCRSETD*RLSFPW
Trigger: CCAGGGAAAAGATAAACGCCAATCAGTCTCTGATCT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCCTAACTCAGTTGATTaGCTCCATTTCCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCPNSVD*LHFPEI
Trigger: AATCTCAGGGAAATGGAGCCAATCAACTGAGTTAGG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374851.1
3UTR CAA 72 bp AATCTGACTTTGATGGTTCACAAGCTCTTCCAGATCTaGTCGTGCCTTAAAGTTCTCACTAACAATATCAAT +
Preference number: 4 (lower is better)
Translates to: NLTLMVHKLFQI*SCLKVLTNNIN
Trigger: ATTGATATTGTTAGTGAGAACTTTAAGGCACGACAAGATCTGGAAGAGCTTGTGAACCATCAAAGTCAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGTAACCTATATCCCTTaGTATGGGAAGGATATCTTA +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYVTYIP*YGKDIL
Trigger: TAAGATATCCTTCCCATATCAAGGGATATAGGTTAC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACACAGTCATATCACTGTaGACAAAATTTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYTVISL*TKFLAV
Trigger: GACTGCCAAAAATTTTGTGCACAGTGATATGACTGT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACATGACAATGTGTTTCTaGCATCTTAGCTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYMTMCF*HLSLQR
Trigger: TCTCTGTAAGCTAAGATGGCAGAAACACATTGTCAT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTCACAGACATGTCTATaGAATACACTCAGTCACAAG +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCSQTCL*NTLSHK
Trigger: CTTGTGACTGAGTGTATTGCATAGACATGTCTGTGA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGATCACAGACATGTCTATaGAATACACTCAGTCACAAG +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGSQTCL*NTLSHK
Trigger: CTTGTGACTGAGTGTATTGCATAGACATGTCTGTGA...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACTGTGCACAAAATTTTTaGCAGTCACAAGCTCTAACA +
Preference number: 4 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYCAQNF*QSQALT
Trigger: TGTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACA...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAATGGTCCTGCCTCGTTaGGCATATATTCTAAACATA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGMVLPR*AYILNI
Trigger: TATGTTTAGAATATATGCCCAACGAGGCAGGACCAT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR TCA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAACTGGACAATTGCTTaGACTCTAATATCATCATCC +
Preference number: 4 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCNWTIA*TLISSS
Trigger: GGATGATGATATTAGAGTTCAAGCAATTGTCCAGTT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR GCA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAATGACAATGTGTTTCTaGCATCTTAGCTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGMTMCF*HLSLQR
Trigger: TCTCTGTAAGCTAAGATGGCAGAAACACATTGTCAT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CCA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCTATATCCCTTGATATaGGAAGGATATCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: DIAGGYITAHYNITTHTYLYPLI*EGYLSS
Trigger: AGAACTAAGATATCCTTCCCATATCAAGGGATATAG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 90 bp CGACCAGCTCGGTCCCCTGCGCGCGCCGAGGGCCGCCTCTGGTATTaGCCAGGCTGGCTAGCTCATCCCGGTGGAGGCGCCATCTCCGGG +
Preference number: 5 (lower is better)
Translates to: RPARSPARAEGRLWY*PGWLAHPGGGAISG
Trigger: CCCGGAGATGGCGCCTCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGCAGGGGACCGAGCTGGTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS TCA 90 bp CGGCGGGCCGCAGGTGCCGGGAAGAGCATGGCTGGGGTGCAACACTaGGAGGCAGGAACCACACTGTACAGGGAAGGACTCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RRAAGAGKSMAGVQH*EAGTTLYREGLSRR
Trigger: GCGGCGGCTGAGTCCTTCCCTGTACAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 90 bp AGTCATCAGAAATCAAACCCGGTTGGGGCGACCAGCTCGGTCCCCTaGGCGCGCCGAGGGCCGCCTCTGGTATTGCCCAGGCTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: SHQKSNPVGATSSVP*ARRGPPLVLPRLAS
Trigger: GCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGCAGGGGACCGAGCTGGTCGCCCCAACCGGGTTTGATTTCTGATGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374848.8
CDS TCA 90 bp TGTCCTTGCCAAAGCCCTTGTGGCAGTACACTTGGGACAGGTAGGTaGGGGTCCGGCGGGCCGCAGGTGCCGGGAAGAGCATGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CPCQSPCGSTLGTGR*GSGGPQVPGRAWLG
Trigger: CCCCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 90 bp GCAGTACACTTGGGACAGGTAGGTGAGGGTCCGGCGGGCCGCAGGTaGCGGGAAGAGCATGGCTGGGGTGCAACACTGAGAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AVHLGQVGEGPAGRR*REEHGWGATLRGRN
Trigger: GTTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAGTGTACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 90 bp GTAGGTGAGGGTCCGGCGGGCCGCAGGTGCCGGGAAGAGCATGGCTaGGGTGCAACACTGAGAGGCAGGAACCACACTGTACAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: VGEGPAGRRCREEHG*GATLRGRNHTVQGR
Trigger: CCTTCCCTGTACAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGGACCCTCACCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCGGGCGCAGCGCGGTTaGGGTGTGCGCCGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDRAQRG*GVRRSL
Trigger: GAGGCTCCGGCGCACACCCAAACCGCGCTGCGCCCG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS TCA 90 bp GGAGAGTCGCCGCAGCCTCCGGAGGAGCATGGCAGCTGGAGAGGTTaGAGTGCTCATGAGGTCAACTTTTGTTCATGTCTGGTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: GESPQPPEEHGSWRG*SAHEVNFCSCLVPR
Trigger: TCTTGGGACCAGACATGAACAAAAGTTGACCTCATGAGCACTTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGCTGCGGCGACTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 90 bp CACTACATAGGCCCTCTCTCCCTTGGCCCTCAACAGCGAGTACAGTaGCATGTCCTTGCCAAAGCCCTTGTGGCAGTACACTTGGGACAG +
Preference number: 5 (lower is better)
Translates to: HYIGPLSLGPQQRVQ*HVLAKALVAVHLGQ
Trigger: CTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTACTCGCTGTTGAGGGCCAAGGGAGAGAGGGCCTATGTAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 90 bp AGGGCATCTCTGAGATGTGGCTCAGAGAAGCGAGCCCGCAGAAGGTaGTCCAAGACTGGGAAGATCTGCTCTTCTGGTACAGCATCGTCT +
Preference number: 5 (lower is better)
Translates to: RASLRCGSEKRARRR*SKTGKICSSGTASS
Trigger: AGACGATGCTGTACCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTTCTGCGGGCTCGCTTCTCTGAGCCACATCTCAGAGATGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 90 bp CCTCTCGGGGTGATACAGCTTGAGATAAAGGGCATCTCTGAGATGTaGCTCAGAGAAGCGAGCCCGCAGAAGGTGCTCCAAGACTGGGAA +
Preference number: 5 (lower is better)
Translates to: PLGVIQLEIKGISEM*LREASPQKVLQDWE
Trigger: TTCCCAGTCTTGGAGCACCTTCTGCGGGCTCGCTTCTCTGAGCCACATCTCAGAGATGCCCTTTATCTCAAGCTGTATCACCCCGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGCACTGGGGGCCACATaGCTGAAGAAGCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQALGAT*LKKPVE
Trigger: TTCCACCGGCTTCTTCAGCAATGTGGCCCCCAGTGC...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACGTTGCACAGGAAGAGTaGGTGCCCCTCGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDVAQEE*VPLALG
Trigger: CCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAAC...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTCGGGCGCAGCGCGGTTaGGGTGTGCGCCGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSRAQRG*GVRRSL
Trigger: GAGGCTCCGGCGCACACCCAAACCGCGCTGCGCCCG...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGGGCCGCCTCTGGTATaGCCCAGGCTGGCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSGPPLV*PRLASS
Trigger: TGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CAA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAAGAAATCAAACCCGGTaGGGGCGACCAGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: QVKETNGIYPHGPASLGIRNQTR*GRPARS
Trigger: GGACCGAGCTGGTCGCCCCAACCGGGTTTGATTTCT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374848.8
CDS-3UTR CAA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAGCACTGGGGGCCACATaGCTGAAGAAGCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: QVKETNGIYPHGPASLGIALGAT*LKKPVE
Trigger: TTCCACCGGCTTCTTCAGCAATGTGGCCCCCAGTGC...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGCTTGTGGCAGTACACTaGGGACAGGTAGGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQLVAVH*GQVGEG
Trigger: ACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAG...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGATCCTTGCCAAAGCCCTaGTGGCAGTACACTTGGGAC +
Preference number: 5 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRSLPKP*WQYTWD
Trigger: GTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGA...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGATACAGTGCCATGTCCTaGCCAAAGCCCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRYSAMS*PKPLWQ
Trigger: CTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTA...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 90 bp TGCCCTCATAGCGATTGGCCACAGGGACATACTTGGAGAGCAACTTaGCATCAAAATGGCTCACACTACGCTCCACGTTGCACAGGAAGA +
Preference number: 5 (lower is better)
Translates to: CPHSDWPQGHTWRAT*HQNGSHYAPRCTGR
Trigger: TCTTCCTGTGCAACGTGGAGCGTAGTGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGTTGCACAGGAAGAGTaGGTGCCCCTCGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSVAQEE*VPLALG
Trigger: CCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAAC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGCCACAGGGACATACTaGGAGAGCAACTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRATGTY*ESNLAS
Trigger: TGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGGC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 90 bp AATCATCCTCAGTGCCCTCATAGCGATTGGCCACAGGGACATACTTaGAGAGCAACTTGGCATCAAAATGGCTCACACTACGCTCCACGT +
Preference number: 5 (lower is better)
Translates to: NHPQCPHSDWPQGHT*RATWHQNGSHYAPR
Trigger: ACGTGGAGCGTAGTGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCACTGAGGATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGCACTGGGGGCCACATaGCTGAAGAAGCCGGTGGAA +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSALGAT*LKKPVE
Trigger: TTCCACCGGCTTCTTCAGCAATGTGGCCCCCAGTGC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAAAGGCTCTTAACATATaGAGGTTCCTCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRKALNI*RFLSCP
Trigger: GGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCTT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAGTAGCTCTGATCACTTaGGACATTGCTGGGGGATAC +
Preference number: 5 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRVALIT*DIAGGY
Trigger: GTATCCCCCAGCAATGTCCAAAGTGATCAGAGCTAC...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGTTCCCTGAGATTCTCTaGGTTCTGCTCACCCCTATG +
Preference number: 5 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQFPEIL*VLLTPM
Trigger: CATAGGGGTGAGCAGAACCAAGAGAATCTCAGGGAA...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS GCA 90 bp TCTCAAACGAGTTGGTCGAAGGGTCATCACCATAATCATCCTCAGTaGCCTCATAGCGATTGGCCACAGGGACATACTTGGAGAGCAACT +
Preference number: 5 (lower is better)
Translates to: SQTSWSKGHHHNHPQ*PHSDWPQGHTWRAT
Trigger: AGTTGCTCTCCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCACTGAGGATGATTATGGTGATGACCCTTCGACCAACTCGTTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAAACTGGACAAGGAAGGATGGCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGTCTTTCTCAAACGAGTaGGTCGAAGGGTCATCACCA +
Preference number: 5 (lower is better)
Translates to: ETGQGRMALAFHNGEVGQSFSNE*VEGSSP
Trigger: TGGTGATGACCCTTCGACCAACTCGTTTGAGAAAGA...CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCATCCTTCCTTGTCCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 90 bp GTCTTCTACCATCAGGACGTAGTCTGGGTTGTAGGTCTGCAGGGATaGCTCCAGGCAATAGACATAGTCCTGCTTCTCTTTCTCAAACGA +
Preference number: 5 (lower is better)
Translates to: VFYHQDVVWVVGLQG*LQAIDIVLLLFLKR
Trigger: TCGTTTGAGAAAGAGAAGCAGGACTATGTCTATTGCCTGGAGTCATCCCTGCAGACCTACAACCCAGACTACGTCCTGATGGTAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTACACTACGCTCCACGTaGCACAGGAAGAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSTLRST*HRKSWC
Trigger: GCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCTTGTGGCAGTACACTaGGGACAGGTAGGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSLVAVH*GQVGEG
Trigger: ACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAGTAGCTCTGATCACTTaGGACATTGCTGGGGGATAC +
Preference number: 5 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKVALIT*DIAGGY
Trigger: GTATCCCCCAGCAATGTCCAAAGTGATCAGAGCTAC...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 90 bp CTCTTGGTTCTGCTCACCCCTATGTGGTCGCTCCATTCTCAAGAATaGTCTCAGGAAGCCTCCAACAGTTTCAGCCTCACACAGAAAATA +
Preference number: 5 (lower is better)
Translates to: LLVLLTPMWSLHSQE*SQEASNSFSLTQKI
Trigger: TATTTTCTGTGTGAGGCTGAAACTGTTGGAGGCTTCCTGAGATCATTCTTGAGAATGGAGCGACCACATAGGGGTGAGCAGAACCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374851.1
ENST00000482920.1
CDS CCA 90 bp ACTCCAGGCAATAGACATAGTCCTGCTTCTCTTTCTCAAACGAGTTaGTCGAAGGGTCATCACCATAATCATCCTCAGTGCCCTCATAGC +
Preference number: 5 (lower is better)
Translates to: TPGNRHSPASLSQTS*SKGHHHNHPQCPHS
Trigger: GCTATGAGGGCACTGAGGATGATTATGGTGATGACCCTTCGACCAACTCGTTTGAGAAAGAGAAGCAGGACTATGTCTATTGCCTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAGGGCCGCCTCTGGTATaGCCCAGGCTGGCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGGPPLV*PRLASS
Trigger: TGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCC...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATTGCTGCAGGAACTCTaGGCTCATTTGGTTCAGATG +
Preference number: 5 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKLLQEL*AHLVQM
Trigger: CATCTGAACCAAATGAGCCAAGAGTTCCTGCAGCAA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATCTTTCTCAAACGAGTaGGTCGAAGGGTCATCACCA +
Preference number: 5 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKSFSNE*VEGSSP
Trigger: TGGTGATGACCCTTCGACCAACTCGTTTGAGAAAGA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATATCTCTGGGTCTCAATTaGTTCATCTGTAGAGCGTGG +
Preference number: 5 (lower is better)
Translates to: QVKETNGIYPHGPASLGISLGLN*FICRAW
Trigger: CCACGCTCTACAGATGAACAAATTGAGACCCAGAGA...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTGAACTCTTGGCTCATTaGGTTCAGATGCCAATGGCG +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSELLAH*VQMPMA
Trigger: CGCCATTGGCATCTGAACCAAATGAGCCAAGAGTTC...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAGTTGCACAGGAAGAGTaGGTGCCCCTCGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGVAQEE*VPLALG
Trigger: CCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAAC...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAATACTTGGAGAGCAACTaGGCATCAAAATGGCTCACA +
Preference number: 5 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKYLESN*ASKWLT
Trigger: TGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGTA...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCGAACTCTTGGCTCATTaGGTTCAGATGCCAATGGCG +
Preference number: 5 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSELLAH*VQMPMA
Trigger: CGCCATTGGCATCTGAACCAAATGAGCCAAGAGTTC...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAGAACTCTTGGCTCATTaGGTTCAGATGCCAATGGCG +
Preference number: 5 (lower is better)
Translates to: PGTARLLSVFITSGQGNKELLAH*VQMPMA
Trigger: CGCCATTGGCATCTGAACCAAATGAGCCAAGAGTTC...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCACCCTCTTTCAAGCTTaGCTGCAGGAACTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSTLFQA*LQELLA
Trigger: AGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGAGGGT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAACCCTCTTTCAAGCTTaGCTGCAGGAACTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PGTARLLSVFITSGQGNKTLFQA*LQELLA
Trigger: AGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGAGGGT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATTCCTTGCCAAAGCCCTaGTGGCAGTACACTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHSLPKP*WQYTWD
Trigger: GTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGA...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTTACAGTGCCATGTCCTaGCCAAAGCCCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLYSAMS*PKPLWQ
Trigger: CTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTA...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAAAAGGCTCTTAACATATaGAGGTTCCTCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PGTARLLSVFITSGQGNKKALNI*RFLSCP
Trigger: GGGGCAGCTGAGGAACCTCAATATGTTAAGAGCCTT...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACCTGTGCACAAAATTTTaGGCAGTCACAAGCTCTAAC +
Preference number: 5 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDLCTKF*AVTSSN
Trigger: GTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACAG...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GTGGGTGGGAACAAAAGAGCAGAACTGAGCCTGCATCTGCAGAAAATGTCCAAAATAGGAGAGAAAAGTTaGCCAAGCGTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: VGGNKRAELSLHLQKMSKIGEKS*PSVFYG
Trigger: TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTAT...TTTGGACATTTTCTGCAGATGCAGGCTCAGTTCTGCTCTTTTGTTCCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTATTCTTCTTTTTGGCTaGGGTGAACGTGGGGATAGG +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSILLFG*GERGDR
Trigger: CCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAAT...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GCCTTAGCCTTCCATAATGGAGAAGTCGGGCAGGGGATGTCTGCATGCAATAGAAGTAACCTATATCCCTaGATATGGGAAGGATATCTT +
Preference number: 5 (lower is better)
Translates to: ALAFHNGEVGQGMSACNRSNLYP*IWEGYL
Trigger: AAGATATCCTTCCCATATCAAGGGATATAGGTTACT...TCTATTGCATGCAGACATCCCCTGCCCGACTTCTCCATTATGGAAGGCTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTGCTGCAGGAACTCTaGGCTCATTTGGTTCAGATG +
Preference number: 5 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLLQEL*AHLVQM
Trigger: CATCTGAACCAAATGAGCCAAGAGTTCCTGCAGCAA...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAATTGCTGCAGGAACTCTaGGCTCATTTGGTTCAGATG +
Preference number: 5 (lower is better)
Translates to: PGTARLLSVFITSGQGNKLLQEL*AHLVQM
Trigger: CATCTGAACCAAATGAGCCAAGAGTTCCTGCAGCAA...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATACACTACGCTCCACGTaGCACAGGAAGAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: DIAGGYITAHYNITTHTYTLRST*HRKSWC
Trigger: GCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGT...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATTACAGTGCCATGTCCTaGCCAAAGCCCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: DIAGGYITAHYNITTHTYYSAMS*PKPLWQ
Trigger: CTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTA...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAGTCAGAAGAGCTCCGTTCCCATTTTGGCTATGCTGCTGTTCAGGTTTGTGACAAGAGCTCCCCTATATaGTATCATTCTGAAATGTCC +
Preference number: 5 (lower is better)
Translates to: KSEELRSHFGYAAVQVCDKSSPI*YHSEMS
Trigger: GGACATTTCAGAATGATACAATATAGGGGAGCTCTT...GTCACAAACCTGAACAGCAGCATAGCCAAAATGGGAACGGAGCTCTTCTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAATCTCTGGGTCTCAATTaGTTCATCTGTAGAGCGTGG +
Preference number: 5 (lower is better)
Translates to: PGTARLLSVFITSGQGNKSLGLN*FICRAW
Trigger: CCACGCTCTACAGATGAACAAATTGAGACCCAGAGA...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATCAGTGCTTCCCTATCTaGGGCCTGGCTAGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHQCFPI*GLASLK
Trigger: CTTTAAGCTAGCCAGGCCCAAGATAGGGAAGCACTG...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTACACTACGCTCCACGTaGCACAGGAAGAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCTLRST*HRKSWC
Trigger: GCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATGCCACAGGGACATACTaGGAGAGCAACTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: DIAGGYITAHYNITTHTYATGTY*ESNLAS
Trigger: TGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGGC...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCTTGTGGCAGTACACTaGGGACAGGTAGGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCLVAVH*GQVGEG
Trigger: ACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACCAGTGCTTCCCTATCTaGGGCCTGGCTAGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYQCFPI*GLASLK
Trigger: CTTTAAGCTAGCCAGGCCCAAGATAGGGAAGCACTG...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CAGGTCAAGGAAACAAATGGAATCTATCCACATGGTCCTGCCTCGTTGGGCATAAGTAACCTATATCCCTaGATATGGGAAGGATATCTT +
Preference number: 5 (lower is better)
Translates to: QVKETNGIYPHGPASLGISNLYP*IWEGYL
Trigger: AAGATATCCTTCCCATATCAAGGGATATAGGTTACT...TATGCCCAACGAGGCAGGACCATGTGGATAGATTCCATTTGTTTCCTTGACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 90 bp AGAAAAGTCTGCTCTCTTTGTAGAATCTTCTCTAACACTCAAGTGTaGGTTGAAGTTAGGGGTGACCTAACTCAGTTGATTGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: RKVCSLCRIFSNTQV*VEVRGDLTQLIGSI
Trigger: AATGGAGCCAATCAACTGAGTTAGGTCACCCCTAACTTCAACCCACACTTGAGTGTTAGAGAAGATTCTACAAAGAGAGCAGACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374851.1
ENST00000482920.1
CDS-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCCTGTGCACAAAATTTTaGGCAGTCACAAGCTCTAAC +
Preference number: 5 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSLCTKF*AVTSSN
Trigger: GTTAGAGCTTGTGACTGCCAAAAATTTTGTGCACAG...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATGAACAATTCTTCTTTTaGGCTTGGGTGAACGTGGGG +
Preference number: 5 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHEQFFF*AWVNVG
Trigger: CCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTC...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGTGGCATCGAAACAAACTGGACAATTGCTTGAACTCTAATATCATCATCCATTCTCTGGGTCTCAATTaGTTCATCTGTAGAGCGTGG +
Preference number: 5 (lower is better)
Translates to: LWHRNKLDNCLNSNIIIHSLGLN*FICRAW
Trigger: CCACGCTCTACAGATGAACAAATTGAGACCCAGAGA...ATGGATGATGATATTAGAGTTCAAGCAATTGTCCAGTTTGTTTCGATGCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTCAGTGCTTCCCTATCTaGGGCCTGGCTAGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCQCFPI*GLASLK
Trigger: CTTTAAGCTAGCCAGGCCCAAGATAGGGAAGCACTG...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGGTGACCTAACTCAGTaGATTGGCTCCATTTCCCTG +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYGDLTQ*IGSISL
Trigger: CAGGGAAATGGAGCCAATCAACTGAGTTAGGTCACC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CAA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGAACCCTCTTTCAAGCTTaGCTGCAGGAACTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGTLFQA*LQELLA
Trigger: AGCCAAGAGTTCCTGCAGCAAAGCTTGAAAGAGGGT...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACTCTTTCTCAAACGAGTaGGTCGAAGGGTCATCACCA +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYSFSNE*VEGSSP
Trigger: TGGTGATGACCCTTCGACCAACTCGTTTGAGAAAGA...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GGTGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCAAGAGCTCCCCTATATaGTATCATTCTGAAATGTCC +
Preference number: 5 (lower is better)
Translates to: GVKLSAALIKDNTQKLDSKSSPI*YHSEMS
Trigger: GGACATTTCAGAATGATACAATATAGGGGAGCTCTT...GGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACATTCTTCTTTTTGGCTaGGGTGAACGTGGGGATAGG +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYILLFG*GERGDR
Trigger: CCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAAT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACGAACAATTCTTCTTTTaGGCTTGGGTGAACGTGGGG +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYEQFFF*AWVNVG
Trigger: CCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTC...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AATACACTCAGTCACAAGAGAGAGCTTCTTAAGCCTGACCATAATTTAAACTCTGAACAATTCTTCTTTTaGGCTTGGGTGAACGTGGGG +
Preference number: 5 (lower is better)
Translates to: NTLSHKRELLKPDHNLNSEQFFF*AWVNVG
Trigger: CCCCACGTTCACCCAAGCCAAAAAGAAGAATTGTTC...AGAGTTTAAATTATGGTCAGGCTTAAGAAGCTCTCTCTTGTGACTGAGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp AAATGTCCAAAGACAACTGGCAGAGTTCACTCCATGGGGAAAAGGCATGTTAGTCATACTTATATCTGTTaGCTCCTCCAAACTAACATG +
Preference number: 5 (lower is better)
Translates to: KCPKTTGRVHSMGKRHVSHTYIC*LLQTNM
Trigger: CATGTTAGTTTGGAGGAGCAAACAGATATAAGTATG...ACTAACATGCCTTTTCCCCATGGAGTGAACTCTGCCAGTTGTCTTTGGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTATTCTTCTTTTTGGCTaGGGTGAACGTGGGGATAGG +
Preference number: 5 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCILLFG*GERGDR
Trigger: CCTATCCCCACGTTCACCCAAGCCAAAAAGAAGAAT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CCGGGCACTGCACGGCTTTTATCAGTTTTTATTACATCAGGTCAAGGAAACAAACATACTTATATCTGTTaGCTCCTCCAAACTAACATG +
Preference number: 5 (lower is better)
Translates to: PGTARLLSVFITSGQGNKHTYIC*LLQTNM
Trigger: CATGTTAGTTTGGAGGAGCAAACAGATATAAGTATG...TTTGTTTCCTTGACCTGATGTAATAAAAACTGATAAAAGCCGTGCAGTGCCCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTTACTTGGAGAGCAACTaGGCATCAAAATGGCTCACA +
Preference number: 5 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCYLESN*ASKWLT
Trigger: TGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGTA...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GAGTTGTATATGTTTATTATAGGAGAGAAAAGTTTGCCAAGCGTCTTCTATGGACATGGTCCTGCCTCGTaGGGCATATATTCTAAACAT +
Preference number: 5 (lower is better)
Translates to: ELYMFIIGEKSLPSVFYGHGPAS*GIYSKH
Trigger: ATGTTTAGAATATATGCCCAACGAGGCAGGACCATG...TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTATAATAAACATATACAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACATAGGAGAGAAAAGTTaGCCAAGCGTCTTCTATGGA +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYIGEKS*PSVFYG
Trigger: TCCATAGAAGACGCTTGGCAAACTTTTCTCTCCTAT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp TGTAAAGCTGTCAGCTGCCCTAATCAAGGACAATACACAAAAATTAGACTCCTTCATACTTATATCTGTTaGCTCCTCCAAACTAACATG +
Preference number: 5 (lower is better)
Translates to: CKAVSCPNQGQYTKIRLLHTYIC*LLQTNM
Trigger: CATGTTAGTTTGGAGGAGCAAACAGATATAAGTATG...AAGGAGTCTAATTTTTGTGTATTGTCCTTGATTAGGGCAGCTGACAGCTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS-3UTR CAA 90 bp GACATTGCTGGGGGATACATAACAGCTCACTATAACATTACAACACATACTTATCTTGTTTCCCTGGTGTaGACCATCTTACTTCATTTA +
Preference number: 5 (lower is better)
Translates to: DIAGGYITAHYNITTHTYLVSLV*TILLHL
Trigger: TAAATGAAGTAAGATGGTCAACACCAGGGAAACAAG...ATAAGTATGTGTTGTAATGTTATAGTGAGCTGTTATGTATCCCCCAGCAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS-3UTR CAA 90 bp CTGGACAATTGCTTGAACTCTAATATCATCATCCATCCTCATAAAGTAACTTGTAAATGTGAAGTCCACTaGGGGCCAGTTAATTCTTTC +
Preference number: 5 (lower is better)
Translates to: LDNCLNSNIIIHPHKVTCKCEVH*GPVNSF
Trigger: GAAAGAATTAACTGGCCCCAAGTGGACTTCACATTT...ACAAGTTACTTTATGAGGATGGATGATGATATTAGAGTTCAAGCAATTGTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS TCA 90 bp TATATCCCAGTTGCTAGAGAATATGGTTACCTACATGGTGAGAATTaGAAGGTACTAGAAAAGTCTGCTCTCTTTGTAGAATCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: YIPVAREYGYLHGEN*KVLEKSALFVESSL
Trigger: TAGAGAAGATTCTACAAAGAGAGCAGACTTTTCTAGTACCTTTCAATTCTCACCATGTAGGTAACCATATTCTCTAGCAACTGGGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482920.1
CDS-3UTR CAA 90 bp TGCCATCTTAGCTTACAGAGACATGATCTAGTTCAGCTTATACTCAGATTTTACAGTAACCTATATCCCTaGATATGGGAAGGATATCTT +
Preference number: 5 (lower is better)
Translates to: CHLSLQRHDLVQLILRFYSNLYP*IWEGYL
Trigger: AAGATATCCTTCCCATATCAAGGGATATAGGTTACT...GTAAAATCTGAGTATAAGCTGAACTAGATCATGTCTCTGTAAGCTAAGATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 72 bp GGGCCCGGAAGGAGCGGGCGCAGCGCGGTTTGGGTGTaGGCCGGAGCCTCACCTCCTCCCGCCTCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: GPGRSGRSAVWV*AGASPPPASQL
Trigger: GAGCTGCGAGGCGGGAGGAGGTGAGGCTCCGGCGCACACCCAAACCGCGCTGCGCCCGCTCCTTCCGGGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374848.8
CDS GCA 72 bp CGGTCCCCTGCGCGCGCCGAGGGCCGCCTCTGGTATTaGCCAGGCTGGCTAGCTCATCCCGGTGGAGGCGCC +
Preference number: 6 (lower is better)
Translates to: RSPARAEGRLWY*PGWLAHPGGGA
Trigger: GGCGCCTCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGCAGGGGACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS CCA 72 bp GCGCGCGCCGAGGGCCGCCTCTGGTATTGCCCAGGCTaGCTAGCTCATCCCGGTGGAGGCGCCATCTCCGGG +
Preference number: 6 (lower is better)
Translates to: ARAEGRLWYCPG*LAHPGGGAISG
Trigger: CCCGGAGATGGCGCCTCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS CAA 72 bp TCGGTCCCCTGCGCGCGCCGAGGGCCGCCTCTGGTATaGCCCAGGCTGGCTAGCTCATCCCGGTGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: SVPCARRGPPLV*PRLASSSRWRR
Trigger: GCGCCTCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGCAGGGGACCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS CAA 90 bp GCGACCAGCTCGGTCCCCTGCGCGCGCCGAGGGCCGCCTCTGGTATaGCCCAGGCTGGCTAGCTCATCCCGGTGGAGGCGCCATCTCCGG +
Preference number: 6 (lower is better)
Translates to: ATSSVPCARRGPPLV*PRLASSSRWRRHLR
Trigger: CCGGAGATGGCGCCTCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGCAGGGGACCGAGCTGGTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS CCA 72 bp CCAGCTCGGTCCCCTGCGCGCGCCGAGGGCCGCCTCTaGTATTGCCCAGGCTGGCTAGCTCATCCCGGTGGA +
Preference number: 6 (lower is better)
Translates to: PARSPARAEGRL*YCPGWLAHPGG
Trigger: TCCACCGGGATGAGCTAGCCAGCCTGGGCAATACCAGAGGCGGCCCTCGGCGCGCGCAGGGGACCGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374847.5
ENST00000374848.8
CDS CCA 72 bp GGTCCGGCGGGCCGCAGGTGCCGGGAAGAGCATGGCTaGGGTGCAACACTGAGAGGCAGGAACCACACTGTA +
Preference number: 6 (lower is better)
Translates to: GPAGRRCREEHG*GATLRGRNHTV
Trigger: TACAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCACCTGCGGCCCGCCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp CAAAGCCCTTGTGGCAGTACACTTGGGACAGGTAGGTaGGGGTCCGGCGGGCCGCAGGTGCCGGGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: QSPCGSTLGTGR*GSGGPQVPGRA
Trigger: TGCTCTTCCCGGCACCTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAGGGCTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 72 bp TGCCATGTCCTTGCCAAAGCCCTTGTGGCAGTACACTaGGGACAGGTAGGTGAGGGTCCGGCGGGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: CHVLAKALVAVH*GQVGEGPAGRR
Trigger: CCTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGACATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 90 bp CGAGTACAGTGCCATGTCCTTGCCAAAGCCCTTGTGGCAGTACACTaGGGACAGGTAGGTGAGGGTCCGGCGGGCCGCAGGTGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: RVQCHVLAKALVAVH*GQVGEGPAGRRCRE
Trigger: TTCCCGGCACCTGCGGCCCGCCGGACCCTCACCTACCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTACTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp AAGAGTTGGTGCCCCTCGCACTGGGGGCCACATTGCTaGAGAAGCCGGTGGAACTGGGACACAACCTGCAGG +
Preference number: 6 (lower is better)
Translates to: KSWCPSHWGPHC*RSRWNWDTTCR
Trigger: CCTGCAGGTTGTGTCCCAGTTCCACCGGCTTCTTCAGCAATGTGGCCCCCAGTGCGAGGGGCACCAACTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp GCAGGTGCCGGGAAGAGCATGGCTGGGGTGCAACACTaGGAGGCAGGAACCACACTGTACAGGGAAGGACTC +
Preference number: 6 (lower is better)
Translates to: AGAGKSMAGVQH*EAGTTLYREGL
Trigger: GAGTCCTTCCCTGTACAGTGTGGTTCCTGCCTCTCAGTGTTGCACCCCAGCCATGCTCTTCCCGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 72 bp CAGGAAGAGTTGGTGCCCCTCGCACTGGGGGCCACATaGCTGAAGAAGCCGGTGGAACTGGGACACAACCTG +
Preference number: 6 (lower is better)
Translates to: QEELVPLALGAT*LKKPVELGHNL
Trigger: CAGGTTGTGTCCCAGTTCCACCGGCTTCTTCAGCAATGTGGCCCCCAGTGCGAGGGGCACCAACTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 90 bp CACGTTGCACAGGAAGAGTTGGTGCCCCTCGCACTGGGGGCCACATaGCTGAAGAAGCCGGTGGAACTGGGACACAACCTGCAGGACGTA +
Preference number: 6 (lower is better)
Translates to: HVAQEELVPLALGAT*LKKPVELGHNLQDV
Trigger: TACGTCCTGCAGGTTGTGTCCCAGTTCCACCGGCTTCTTCAGCAATGTGGCCCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp TCTGAGGTGTCTGAGGCTAGTCATGTCCCCGGAGATTaGCGGGACCGTCAGCCAATCGGCCGTCTGAACGAG +
Preference number: 6 (lower is better)
Translates to: SEVSEASHVPGD*RDRQPIGRLNE
Trigger: CTCGTTCAGACGGCCGATTGGCTGACGGTCCCGTCAATCTCCGGGGACATGACTAGCCTCAGACACCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482920.1
CDS CCA 72 bp CGAGGTTCGGCTCCACTACATAGGCCCTCTCTCCCTTaGCCCTCAACAGCGAGTACAGTGCCATGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: RGSAPLHRPSLP*PSTASTVPCPC
Trigger: GCAAGGACATGGCACTGTACTCGCTGTTGAGGGCCAAGGGAGAGAGGGCCTATGTAGTGGAGCCGAACCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 72 bp ATGGCTCACACTACGCTCCACGTTGCACAGGAAGAGTaGGTGCCCCTCGCACTGGGGGCCACATTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: MAHTTLHVAQEE*VPLALGATLLK
Trigger: CTTCAGCAATGTGGCCCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGTGAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 72 bp CCCTTGGCCCTCAACAGCGAGTACAGTGCCATGTCCTaGCCAAAGCCCTTGTGGCAGTACACTTGGGACAGG +
Preference number: 6 (lower is better)
Translates to: PLALNSEYSAMS*PKPLWQYTWDR
Trigger: CCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTACTCGCTGTTGAGGGCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp CACCAACCCATTCCAGGATCCGCATGGGCTCTGGATTaGTGTAGTGCTGGAGCCTCTCGGGGTGATACAGCT +
Preference number: 6 (lower is better)
Translates to: HQPIPGSAWALD*CSAGASRGDTA
Trigger: AGCTGTATCACCCCGAGAGGCTCCAGCACTACATCAATCCAGAGCCCATGCGGATCCTGGAATGGGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 72 bp CCTTGGCCCTCAACAGCGAGTACAGTGCCATGTCCTTaGCAAAGCCCTTGTGGCAGTACACTTGGGACAGGT +
Preference number: 6 (lower is better)
Translates to: PWPSTASTVPCP*QSPCGSTLGTG
Trigger: ACCTGTCCCAAGTGTACTGCCACAAGGGCTTTGGCAAGGACATGGCACTGTACTCGCTGTTGAGGGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CAA 72 bp AACTTGGCATCAAAATGGCTCACACTACGCTCCACGTaGCACAGGAAGAGTTGGTGCCCCTCGCACTGGGGG +
Preference number: 6 (lower is better)
Translates to: NLASKWLTLRST*HRKSWCPSHWG
Trigger: CCCCCAGTGCGAGGGGCACCAACTCTTCCTGTGCAACGTGGAGCGTAGTGTGAGCCATTTTGATGCCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp CCGCAGCCTCCGGAGGAGCATGGCAGCTGGAGAGGTTaGAGTGCTCATGAGGTCAACTTTTGTTCATGTCTG +
Preference number: 6 (lower is better)
Translates to: PQPPEEHGSWRG*SAHEVNFCSCL
Trigger: CAGACATGAACAAAAGTTGACCTCATGAGCACTTCAACCTCTCCAGCTGCCATGCTCCTCCGGAGGCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 72 bp CGAGCCCGCAGAAGGTGCTCCAAGACTGGGAAGATCTaGTCTTCTGGTACAGCATCGTCTTCTACCATCAGG +
Preference number: 6 (lower is better)
Translates to: RARRRCSKTGKI*SSGTASSSTIR
Trigger: CCTGATGGTAGAAGACGATGCTGTACCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTTCTGCGGGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp CTCAGAGAAGCGAGCCCGCAGAAGGTGCTCCAAGACTaGGAAGATCTGCTCTTCTGGTACAGCATCGTCTTC +
Preference number: 6 (lower is better)
Translates to: LREASPQKVLQD*EDLLFWYSIVF
Trigger: GAAGACGATGCTGTACCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTTCTGCGGGCTCGCTTCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS GCA 72 bp TCATGTATATCCAGGTTAGTAAGGGCCCCAGCAACATaGCTACACCAACCCATTCCAGGATCCGCATGGGCT +
Preference number: 6 (lower is better)
Translates to: SCISRLVRAPAT*LHQPIPGSAWA
Trigger: AGCCCATGCGGATCCTGGAATGGGTTGGTGTAGGCATGTTGCTGGGGCCCTTACTAACCTGGATATACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp AGCGATTGGCCACAGGGACATACTTGGAGAGCAACTTaGCATCAAAATGGCTCACACTACGCTCCACGTTGC +
Preference number: 6 (lower is better)
Translates to: SDWPQGHTWRAT*HQNGSHYAPRC
Trigger: GCAACGTGGAGCGTAGTGTGAGCCATTTTGATGCCAAGTTGCTCTCCAAGTATGTCCCTGTGGCCAATCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp GTGATACAGCTTGAGATAAAGGGCATCTCTGAGATGTaGCTCAGAGAAGCGAGCCCGCAGAAGGTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: VIQLEIKGISEM*LREASPQKVLQ
Trigger: TTGGAGCACCTTCTGCGGGCTCGCTTCTCTGAGCCACATCTCAGAGATGCCCTTTATCTCAAGCTGTATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp CTTCAGAAAGGCATCTCTTGGCACCCTAGAGGAGACTaGGATGAAAGTTGTACCGGAGACTGGAGAAGAGCC +
Preference number: 6 (lower is better)
Translates to: LQKGISWHPRGD*DESCTGDWRRA
Trigger: GGCTCTTCTCCAGTCTCCGGTACAACTTTCATCCCAGTCTCCTCTAGGGTGCCAAGAGATGCCTTTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp CTGCTCACCCCTATGTGGTCGCTCCATTCTCAAGAATaGTCTCAGGAAGCCTCCAACAGTTTCAGCCTCACA +
Preference number: 6 (lower is better)
Translates to: LLTPMWSLHSQE*SQEASNSFSLT
Trigger: TGTGAGGCTGAAACTGTTGGAGGCTTCCTGAGATCATTCTTGAGAATGGAGCGACCACATAGGGGTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374851.1
ENST00000482920.1
CDS GCA 72 bp AGTTGGTCGAAGGGTCATCACCATAATCATCCTCAGTaGCCTCATAGCGATTGGCCACAGGGACATACTTGG +
Preference number: 6 (lower is better)
Translates to: SWSKGHHHNHPQ*PHSDWPQGHTW
Trigger: CCAAGTATGTCCCTGTGGCCAATCGCTATGAGGGCACTGAGGATGATTATGGTGATGACCCTTCGACCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp CAGAAGGTGCTCCAAGACTGGGAAGATCTGCTCTTCTaGTACAGCATCGTCTTCTACCATCAGGACGTAGTC +
Preference number: 6 (lower is better)
Translates to: QKVLQDWEDLLF*YSIVFYHQDVV
Trigger: GACTACGTCCTGATGGTAGAAGACGATGCTGTACCAGAAGAGCAGATCTTCCCAGTCTTGGAGCACCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS TCA 72 bp CATCAGGACGTAGTCTGGGTTGTAGGTCTGCAGGGATaGCTCCAGGCAATAGACATAGTCCTGCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: HQDVVWVVGLQG*LQAIDIVLLLF
Trigger: AAAGAGAAGCAGGACTATGTCTATTGCCTGGAGTCATCCCTGCAGACCTACAACCCAGACTACGTCCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp ACTCAGTTGATTGGCTCCATTTCCCTGAGATTCTCTTaGTTCTGCTCACCCCTATGTGGTCGCTCCATTCTC +
Preference number: 6 (lower is better)
Translates to: TQLIGSISLRFS*FCSPLCGRSIL
Trigger: GAGAATGGAGCGACCACATAGGGGTGAGCAGAACCAAGAGAATCTCAGGGAAATGGAGCCAATCAACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374851.1
ENST00000482920.1
CDS CAA 72 bp AACTCAGTTGATTGGCTCCATTTCCCTGAGATTCTCTaGGTTCTGCTCACCCCTATGTGGTCGCTCCATTCT +
Preference number: 6 (lower is better)
Translates to: NSVDWLHFPEIL*VLLTPMWSLHS
Trigger: AGAATGGAGCGACCACATAGGGGTGAGCAGAACCAAGAGAATCTCAGGGAAATGGAGCCAATCAACTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374851.1
ENST00000482920.1
CDS CAA 90 bp TATGTTCTCAGGCTCCCACTTCACGGAATGAAATGTGAAGTCCACTaGGGGCCAGTTAATTCTTTCCAAGATAGTCAAGGTGTTCCACTG +
Preference number: 6 (lower is better)
Translates to: YVLRLPLHGMKCEVH*GPVNSFQDSQGVPL
Trigger: CAGTGGAACACCTTGACTATCTTGGAAAGAATTAACTGGCCCCAAGTGGACTTCACATTTCATTCCGTGAAGTGGGAGCCTGAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS CAA 72 bp AGGCTCCCACTTCACGGAATGAAATGTGAAGTCCACTaGGGGCCAGTTAATTCTTTCCAAGATAGTCAAGGT +
Preference number: 6 (lower is better)
Translates to: RLPLHGMKCEVH*GPVNSFQDSQG
Trigger: ACCTTGACTATCTTGGAAAGAATTAACTGGCCCCAAGTGGACTTCACATTTCATTCCGTGAAGTGGGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374851.1
CDS CCA 72 bp AATAGACATAGTCCTGCTTCTCTTTCTCAAACGAGTTaGTCGAAGGGTCATCACCATAATCATCCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: NRHSPASLSQTS*SKGHHHNHPQC
Trigger: GCACTGAGGATGATTATGGTGATGACCCTTCGACCAACTCGTTTGAGAAAGAGAAGCAGGACTATGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374847.5
ENST00000374848.8
ENST00000374851.1
CDS CCA 72 bp TGCTCTCTTTGTAGAATCTTCTCTAACACTCAAGTGTaGGTTGAAGTTAGGGGTGACCTAACTCAGTTGATT +
Preference number: 6 (lower is better)
Translates to: CSLCRIFSNTQV*VEVRGDLTQLI
Trigger: AATCAACTGAGTTAGGTCACCCCTAACTTCAACCCACACTTGAGTGTTAGAGAAGATTCTACAAAGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374851.1
ENST00000482920.1
CDS TCA 72 bp GTGACACCTGTGAAGGTGTTAGATAACTGGAACTTTTaGGAAAGACATATATCCCAGTTGCTAGAGAATATG +
Preference number: 6 (lower is better)
Translates to: VTPVKVLDNWNF*ERHISQLLENM
Trigger: CATATTCTCTAGCAACTGGGATATATGTCTTTCTCAAAAGTTCCAGTTATCTAACACCTTCACAGGTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482920.1
CDS TCA 72 bp GTTGCTAGAGAATATGGTTACCTACATGGTGAGAATTaGAAGGTACTAGAAAAGTCTGCTCTCTTTGTAGAA +
Preference number: 6 (lower is better)
Translates to: VAREYGYLHGEN*KVLEKSALFVE
Trigger: TTCTACAAAGAGAGCAGACTTTTCTAGTACCTTTCAATTCTCACCATGTAGGTAACCATATTCTCTAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482920.1