RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000161395

Ensembl transcript IDs: ENST00000300658.9, ENST00000309862.10, ENST00000378011.8, ENST00000429199.6, ENST00000577337.5, ENST00000579146.5, ENST00000580898.5, ENST00000582276.1, ENST00000584620.5, ENST00000584856.1, ENST00000619169.4

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTaGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAG +
Preference number: 1 (lower is better)
Translates to: TPRPMLTALSPMHSA*PTLPTHGGRLSTRQ
Trigger: CTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 90 bp ACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGCCCTGAAAGGGAGTATGGTGAGGCC +
Preference number: 1 (lower is better)
Translates to: TVAGSQPDSSTGSLP*ACWSPGPEREYGEA
Trigger: GGCCTCACCATACTCCCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 90 bp CCTGTCACCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTaGCAGGCTCTCAACCAGACAGCAGCACAGGATCCTTGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: PVTYALSLAHTPDTR*QALNQTAAQDPCPG
Trigger: CCCAGGGCAAGGATCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR GCA 90 bp CACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTaGGCACCTAGGCCTGAGCTCACACACACCCAGGCCCATGCTCAC +
Preference number: 1 (lower is better)
Translates to: HFEATPLPRQHPSPH*APRPELTHTQAHAH
Trigger: GTGAGCATGGGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR TCA 90 bp CTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGATTCCCTCATCCTGCTCCAACCTCT +
Preference number: 1 (lower is better)
Translates to: LSAQVAPWAELALHK*LLMVTGFPHPAPTS
Trigger: AGAGGTTGGAGCAGGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CCA 90 bp CCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTGGGCCCACATCCTTCATGTCCAAGT +
Preference number: 1 (lower is better)
Translates to: PSLEQTPRLVRANRG*AGHMILGPHPSCPS
Trigger: ACTTGGACATGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 90 bp CCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTaGCCACATGATTCTGGGCCCACATCCTTCATGTCCAAGTTCAAG +
Preference number: 1 (lower is better)
Translates to: PRTDSKAGEGQQGVG*PHDSGPTSFMSKFK
Trigger: CTTGAACTTGGACATGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR TCA 90 bp ATCCCAGCAGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGAACAAGCATCCAGCACCACCTAGTG +
Preference number: 1 (lower is better)
Translates to: IPAAWSLKIPWGESP*TLAGQRTSIQHHLV
Trigger: CACTAGGTGGTGCTGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCTGCTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 90 bp TTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCAGCACCACCTAGTGGTGTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: LVPQDPMGRIAVNLG*PKNKHPAPPSGVLE
Trigger: CTCCAGGACACCACTAGGTGGTGCTGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR GCA 90 bp GGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCTaGTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCA +
Preference number: 1 (lower is better)
Translates to: GAPQVIIDGDRIPSS*SNLSTVDTFTGSHS
Trigger: TGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCAGGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR GCA 90 bp GGTCAGGGGCAGAGCAAAAATCCAGTCTGCTTCAACCACGGAGACTaGCTTTGGGATGGAAAGTTTCTGGAGCTCCCTCCATTCTATTCC +
Preference number: 1 (lower is better)
Translates to: GQGQSKNPVCFNHGD*LWDGKFLELPPFYS
Trigger: GGAATAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCTCTGCCCCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR GCA 90 bp TGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTaGCAGGGTTCAGTTCCTGGCTCTGCATTTCCTGTGTGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: WEVVVSLRMQALQPD*QGSVPGSAFPVCPW
Trigger: CCAAGGACACACAGGAAATGCAGAGCCAGGAACTGAACCCTGGCAGTCTGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR CCA 90 bp GAGCAAAAATCCAGTCTGCTTCAACCACGGAGACTGCCTTTGGGATaGAAAGTTTCTGGAGCTCCCTCCATTCTATTCCTGTGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: EQKSSLLQPRRLPLG*KVSGAPSILFLWGR
Trigger: CCTGCCCCACAGGAATAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CCA 90 bp GGGCAGAGCAAAAATCCAGTCTGCTTCAACCACGGAGACTGCCTTTaGGATGGAAAGTTTCTGGAGCTCCCTCCATTCTATTCCTGTGGG +
Preference number: 1 (lower is better)
Translates to: GQSKNPVCFNHGDCL*DGKFLELPPFYSCG
Trigger: CCCACAGGAATAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR TCA 90 bp CACATGATTCTGGGCCCACATCCTTCATGTCCAAGTTCAAGAAGTTaGAAAGAGAAAATCATCTCAAGGGTTGAGGGGAGAAGGGAGGCC +
Preference number: 1 (lower is better)
Translates to: HMILGPHPSCPSSRS*KEKIISRVEGRREA
Trigger: GGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTTTCTCTTTTCAACTTCTTGAACTTGGACATGAAGGATGTGGGCCCAGAATCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGGGCCTCCTGGGAACCTaGCTAGGGCAATGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVGLLGT*LGQWSG
Trigger: CCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCC...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVTGSLP*ACWSPG
Trigger: GCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGT...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGCTCTCGAGTCCCAGATaGTGGGAGGCCTTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: SSWLSAQVAPWAELALHKLSSPR*WEAFPR
Trigger: TCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAG...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGGCTGTCCGCCCAGGTaGCGCCTTGGGCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAGCPPR*RLGQSW
Trigger: CCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR TCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 2 (lower is better)
Translates to: SSWLSAQVAPWAELALHKGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCGGGCAGGATCCCCACTaGGGCAGACTCGCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAGQDPH*GRLAPR
Trigger: CCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGCCAATCCCAGCAGCTTaGTCCCTCAAGATCCCATGG +
Preference number: 2 (lower is better)
Translates to: SSWLSAQVAPWAELALHKPIPAA*SLKIPW
Trigger: CCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGG...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGCCAATCCCAGCAGCTTaGTCCCTCAAGATCCCATGG +
Preference number: 2 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVPIPAA*SLKIPW
Trigger: CCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGG...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: QHPSPHCAPRPELTHTQATGSLP*ACWSPG
Trigger: GCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGT...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGCCATGGAGAGCTCCTaGCTGTCCGCCCAGGTGGCG +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAAMESS*LSAQVA
Trigger: CGCCACCTGGGCGGACAGCCAGGAGCTCTCCATGGC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CAA 90 bp CAGCCTGGCCATGGAGAGCTCCTGGCTGTCCGCCCAGGTGGCGCCTaGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: QPGHGELLAVRPGGA*GRAGAPQVIIDGDR
Trigger: CCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCTCTCCATGGCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR TCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 2 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGTCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQSLPWA*WSPGPE
Trigger: TTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGA...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTTCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPSLPWA*WSPGPE
Trigger: TTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGA...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGCGGCCCTGTCACCTATaGACTCAGCCTGGCCCACAC +
Preference number: 2 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQRPCHL*TQPGPH
Trigger: GTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCG...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGGCCTCCTGGGAACCTaGCTAGGGCAATGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPGLLGT*LGQWSG
Trigger: CCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCC...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCAGGCAGCCTGGCCATaGAGAGCTCCTGGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAQAAWP*RAPGCP
Trigger: CGGACAGCCAGGAGCTCTCCATGGCCAGGCTGCCTG...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CAA 90 bp CGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGATCCTaGCCCTGGGCTTGCTGGAGCCCTGGCCCTGAAAGGGAGTATGGT +
Preference number: 2 (lower is better)
Translates to: RHTVAGSQPDSSTGS*PWACWSPGPEREYG
Trigger: ACCATACTCCCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR TCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 2 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR TCA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 2 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR TCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCTGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGA +
Preference number: 2 (lower is better)
Translates to: QHPSPHCAPRPELTHTQAWGESP*TLAGQR
Trigger: TCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCA...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR TCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGATGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGA +
Preference number: 2 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGWGESP*TLAGQR
Trigger: TCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCA...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCCTCTCGAGTCCCAGATaGTGGGAGGCCTTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTLSSPR*WEAFPR
Trigger: TCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAG...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGACTCTCGAGTCCCAGATaGTGGGAGGCCTTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGLSSPR*WEAFPR
Trigger: TCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAG...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCACACACCCAGGCCCATaGTCACGGCCCTGTCACCTA +
Preference number: 2 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPATHPGP*SRPCHL
Trigger: TAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGTGT...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGAGGATTCCCTCATCCTaGTCCAACCTCTCAACTGTG +
Preference number: 2 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVRIPSS*SNLSTV
Trigger: CACAGTTGAGAGGTTGGAGCAGGATGAGGGAATCCT...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR GCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGGACCCTGTGAGGTTTaGAGGAGGCGGGCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAGPCEV*RRRAKG
Trigger: CCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAGGGCAGGATCCCCACTaGGGCAGACTCGCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPGQDPH*GRLAPR
Trigger: CCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGAAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 2 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRRANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTTTGCCCTGGGCTTGCTaGAGCCCTGGCCCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPLPWAC*SPGPER
Trigger: CCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAA...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVATGSLP*ACWSPG
Trigger: GCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGT...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCGAGGGGCTGCTTCTaGAGGGCACTGTTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKPRGCF*RALLCG
Trigger: CCCACACAACAGTGCCCTCCAGAAGCAGCCCCTCGG...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 2 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDRANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAAAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 2 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKRANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCTCGAGTCCCAGATGCTaGGAGGCCTTCCCTAGAACA +
Preference number: 2 (lower is better)
Translates to: QHPSPHCAPRPELTHTQASSPRC*EAFPRT
Trigger: TGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 2 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTATGCACTCAGCCTaGCCCACACTCCCGACACAC +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAPMHSA*PTLPTH
Trigger: GTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCCTATGGCAAAGGGGCTaGCAGCAGGGGAATGGAGGT +
Preference number: 2 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPALWQRG*QQGNGG
Trigger: ACCTCCATTCCCCTGCTGCCAGCCCCTTTGCCATAG...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR TCA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 2 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACGGCCCTGTCACCTATaGACTCAGCCTGGCCCACAC +
Preference number: 2 (lower is better)
Translates to: THFEATPLPRQHPSPHCARPCHL*TQPGPH
Trigger: GTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCG...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR GCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGTCACTCATCTCACATaGCCACCAGCACGCGCACAC +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAVTHLT*PPARAH
Trigger: GTGTGCGCGTGCTGGTGGGCATGTGAGATGAGTGAC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR GCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTACCAGACAGGGAACATaGACACAGGCAGCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPTRQGT*TQAAWP
Trigger: TGGCCAGGCTGCCTGTGTGCATGTTCCCTGTCTGGT...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 2 (lower is better)
Translates to: QHPSPHCAPRPELTHTQAAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GGAGACGTGCACGGTCAGCATGAGCAGCAGGAGAGCCCGGAAGGCACTGACCACCCAGGGTTCAGTTCCTaGCTCTGCATTTCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: GDVHGQHEQQESPEGTDHPGFSS*LCISCV
Trigger: CACACAGGAAATGCAGAGCCAGGAACTGAACCCTGG...GTGGTCAGTGCCTTCCGGGCTCTCCTGCTGCTCATGCTGACCGTGCACGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
3UTR-3UTR TCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 2 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCCCAACCTCTCAACTGTaGACACATTCACCGGCAGTC +
Preference number: 2 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAPTSQL*THSPAV
Trigger: GACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGG...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTCGCCTTGGGCAGAGCTaGCGCTCCACAAGTGATTAT +
Preference number: 2 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPRLGQS*RSTSDY
Trigger: ATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCG...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CAA 90 bp GCTAGGGCAATGGTCAGGGTGAAACTCCTTCCCAATCCCAGCAGCTaGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGC +
Preference number: 2 (lower is better)
Translates to: ARAMVRVKLLPNPSS*VPQDPMGRIAVNLG
Trigger: GCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR TCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCCTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGA +
Preference number: 2 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPALALHK*LLMVTG
Trigger: TCCTGTCACCATCAATAATCACTTGTGGAGCGCCAG...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR TCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCCTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAG +
Preference number: 2 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSLELVL*FLQQVQ
Trigger: CTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAG...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579146.5
3UTR-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 2 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCAACCTCTCAACTGTaGACACATTCACCGGCAGTC +
Preference number: 2 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAPTSQL*THSPAV
Trigger: GACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGG...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCATCGAGTCCCAGATGCTaGGAGGCCTTCCCTAGAACA +
Preference number: 2 (lower is better)
Translates to: THFEATPLPRQHPSPHCASSPRC*EAFPRT
Trigger: TGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAAATCGCCGTGAACCTTaGCTGGCCAAAGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQANRREP*LAKEQA
Trigger: TGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATT...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCAACAGTAAGACCCTCTaGGAAGGGAAGAAACCAGAC +
Preference number: 2 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPANSKTL*EGKKPD
Trigger: GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTT...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAAAACAGTAAGACCCTCTaGGAAGGGAAGAAACCAGAC +
Preference number: 2 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKNSKTL*EGKKPD
Trigger: GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTT...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CCA 90 bp AGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTCCAGGGTTCAGTTCCTaGCTCTGCATTTCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SVPGVENCGPEPCIEGHPPGFSS*LCISCV
Trigger: CACACAGGAAATGCAGAGCCAGGAACTGAACCCTGG...AGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR CAA 90 bp GGGGCAGAGCAAAAATCCAGTCTGCTTCAACCACGGAGACTGCCTTaGGGATGGAAAGTTTCTGGAGCTCCCTCCATTCTATTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GAEQKSSLLQPRRLP*GWKVSGAPSILFLW
Trigger: CCACAGGAATAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCTCTGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR TCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCGTCTTCAGTCCAGCTTaGACTTGTCCTCTGATTCCT +
Preference number: 2 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSVFSPA*TCPLIP
Trigger: AGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGAC...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579146.5
3UTR-3UTR GCA 90 bp GATGACAGTGGAGGCACAGAAGTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTTTCAGTTCCTGGCTCTaGATTTCCTGTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: DDSGGTEVVHFLCEVSVPFSSWL*ISCVSL
Trigger: CAAGGACACACAGGAAATGCAGAGCCAGGAACTGAA...AGGGACACTGACCTCACAGAGAAAATGGACTACTTCTGTGCCTCCACTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR-3UTR GCA 90 bp TTTCCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCATTCAGTTCCTGGCTCTaGATTTCCTGTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: FPQIWEVVVSLRMQALQPFSSWL*ISCVSL
Trigger: CAAGGACACACAGGAAATGCAGAGCCAGGAACTGAA...TGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR-3UTR CAA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTCGCCCAGGTGGCGCCTaGGGCAGAGCTGGCGCTCCA +
Preference number: 3 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPRPGGA*GRAGAP
Trigger: TGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCG...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR GCA 72 bp ACACACCCAGGCCCATGCTCACGGCCCTGTCACCTATaGACTCAGCCTGGCCCACACTCCCGACACACGGTG +
Preference number: 3 (lower is better)
Translates to: THPGPCSRPCHL*TQPGPHSRHTV
Trigger: CACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR GCA 72 bp GCCACACCTCTTCCCCGACAACACCCGTCTCCACACTaGGCACCTAGGCCTGAGCTCACACACACCCAGGCC +
Preference number: 3 (lower is better)
Translates to: ATPLPRQHPSPH*APRPELTHTQA
Trigger: GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CAA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCCCCAATCCCAGCAGCTaGGTCCCTCAAGATCCCATG +
Preference number: 3 (lower is better)
Translates to: QHPSPHCAPRPELTHTQAPNPSS*VPQDPM
Trigger: CATGGGATCTTGAGGGACCAAGCTGCTGGGATTGGG...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 72 bp GACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTaGCCACATGATTCTGGGCCCACATCCTTCATGTCC +
Preference number: 3 (lower is better)
Translates to: DSKAGEGQQGVG*PHDSGPTSFMS
Trigger: GGACATGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR GCA 72 bp CAACCAGACAGCAGCACAGGATCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAAAGGGAGTATGGTGAG +
Preference number: 3 (lower is better)
Translates to: QPDSSTGSLPWA*WSPGPEREYGE
Trigger: CTCACCATACTCCCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCTGTCTGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 72 bp GGCTCTCAACCAGACAGCAGCACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGCCCTGAAAGGGAGTAT +
Preference number: 3 (lower is better)
Translates to: GSQPDSSTGSLP*ACWSPGPEREY
Trigger: ATACTCCCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCTGTCTGGTTGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR CCA 72 bp TATGCACTCAGCCTGGCCCACACTCCCGACACACGGTaGCAGGCTCTCAACCAGACAGCAGCACAGGATCCT +
Preference number: 3 (lower is better)
Translates to: YALSLAHTPDTR*QALNQTAAQDP
Trigger: AGGATCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CAA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CAA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CAA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGGTCTTCAGTCCAGCTaGAACTTGTCCTCTGATTCC +
Preference number: 3 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPGLQSS*NLSSDS
Trigger: GGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACC...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
3UTR-3UTR CAA 90 bp CACTCTCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: HSRVPDAGRPSLEQTPRLKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...CAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR-3UTR CAA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGAGCAGCACAGGATCCTaGCCCTGGGCTTGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMSSTGS*PWACWS
Trigger: GCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCT...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR TCA 72 bp GCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGAACAAGCATCCAGCAC +
Preference number: 3 (lower is better)
Translates to: AWSLKIPWGESP*TLAGQRTSIQH
Trigger: GTGCTGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR TCA 72 bp CAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGATTCCCTCATCCTGCT +
Preference number: 3 (lower is better)
Translates to: QVAPWAELALHK*LLMVTGFPHPA
Trigger: AGCAGGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR TCA 72 bp GTATCAAAAGAAGCTAGCGCAGGCCACCCGAGTCCCTaGGGTTGGAGTCCTAGCATAGCTCCCCTCCCTCAA +
Preference number: 3 (lower is better)
Translates to: VSKEASAGHPSP*GWSPSIAPLPQ
Trigger: TTGAGGGAGGGGAGCTATGCTAGGACTCCAACCTCAGGGACTCGGGTGGCCTGCGCTAGCTTCTTTTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CAA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACCAGTCCAGCTTGAACTaGTCCTCTGATTCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDQSSLN*SSDSFS
Trigger: GCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTG...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579146.5
3UTR TCA 72 bp CTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTaGACTTGTCCTCTGATTCCTTCAGCAGGTACAGGC +
Preference number: 3 (lower is better)
Translates to: LGQTRSKVFSPA*TCPLIPSAGTG
Trigger: GCCTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
3UTR CCA 72 bp CAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCAGCACCACCTAGTGGT +
Preference number: 3 (lower is better)
Translates to: QDPMGRIAVNLG*PKNKHPAPPSG
Trigger: ACCACTAGGTGGTGCTGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
3UTR GCA 72 bp AGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATaGATTGAGGGACACCCTTTCCTCAGATTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SVPGVENCGPEP*IEGHPFLRFGR
Trigger: CCTCCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR GCA 72 bp CAGAGCAAAAATCCAGTCTGCTTCAACCACGGAGACTaGCTTTGGGATGGAAAGTTTCTGGAGCTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: QSKNPVCFNHGD*LWDGKFLELPP
Trigger: TGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR GCA 72 bp GTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTaGCAGGGTTCAGTTCCTGGCTCTGCATTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: VVSLRMQALQPD*QGSVPGSAFPV
Trigger: CACAGGAAATGCAGAGCCAGGAACTGAACCCTGGCAGTCTGGCTGTAGGGCTTGCATTCTTAATGATACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR CCA 72 bp TCCAGTCTGCTTCAACCACGGAGACTGCCTTTGGGATaGAAAGTTTCTGGAGCTCCCTCCATTCTATTCCTG +
Preference number: 3 (lower is better)
Translates to: SSLLQPRRLPLG*KVSGAPSILFL
Trigger: CAGGAATAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR GCA 72 bp CAAGTGATTATTGATGGTGACAGGATTCCCTCATCCTaGTCCAACCTCTCAACTGTGGACACATTCACCGGC +
Preference number: 3 (lower is better)
Translates to: QVIIDGDRIPSS*SNLSTVDTFTG
Trigger: GCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCAGGATGAGGGAATCCTGTCACCATCAATAATCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR-3UTR CAA 90 bp GATGACAGTGGAGGCACAGAAGTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTACCCTTTCCTCAGATTaGGGAGGTAGTGGTATCATT +
Preference number: 3 (lower is better)
Translates to: DDSGGTEVVHFLCEVSVPTLSSD*GGSGII
Trigger: AATGATACCACTACCTCCCAAATCTGAGGAAAGGGT...AGGGACACTGACCTCACAGAGAAAATGGACTACTTCTGTGCCTCCACTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR CCA 72 bp AAAAATCCAGTCTGCTTCAACCACGGAGACTGCCTTTaGGATGGAAAGTTTCTGGAGCTCCCTCCATTCTAT +
Preference number: 3 (lower is better)
Translates to: KNPVCFNHGDCL*DGKFLELPPFY
Trigger: ATAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR TCA 72 bp CTGGGCCCACATCCTTCATGTCCAAGTTCAAGAAGTTaGAAAGAGAAAATCATCTCAAGGGTTGAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: LGPHPSCPSSRS*KEKIISRVEGR
Trigger: TCTCCCCTCAACCCTTGAGATGATTTTCTCTTTTCAACTTCTTGAACTTGGACATGAAGGATGTGGGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGGGCTGTCCGCCCAGGTaGCGCCTTGGGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVGCPPR*RLGQSW
Trigger: CCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCC...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCACGCACTTGCGCACGTaGGGCAGCCGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLTHLRT*GSRRWF
Trigger: GAACCAGCGGCGGCTGCCTCACGTGCGCAAGTGCGT...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCGGCGCAGGCATAGTGTaGCCCCTGCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QHPSPHCAPRPELTHTQAGAGIV*PLPALG
Trigger: CCCCAGGGCAGGCAGGGGCCACACTATGCCTGCGCC...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCACGCACTTGCGCACGTaGGGCAGCCGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSTHLRT*GSRRWF
Trigger: GAACCAGCGGCGGCTGCCTCACGTGCGCAAGTGCGT...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGGGCCACCCGAGTCCCTaGGGTTGGAGTCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: SSWLSAQVAPWAELALHKGHPSP*GWSPSI
Trigger: TATGCTAGGACTCCAACCTCAGGGACTCGGGTGGCC...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 4 (lower is better)
Translates to: SSWLSAQVAPWAELALHKRANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCGGCGCAGGCATAGTGTaGCCCCTGCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAGAGIV*PLPALG
Trigger: CCCCAGGGCAGGCAGGGGCCACACTATGCCTGCGCC...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGTGGCGGGAGCGGAAGTaGTTCAGAGCGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWWRERK*FRAPPE
Trigger: CTCTGGGGGCGCTCTGAATCACTTCCGCTCCCGCCA...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCACGCACTTGCGCACGTaGGGCAGCCGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPATHLRT*GSRRWF
Trigger: GAACCAGCGGCGGCTGCCTCACGTGCGCAAGTGCGT...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR GCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGCCCCCAGAGCAGTTCTaGTCTTCGCACTGCAGTACG +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVPPEQF*SSHCST
Trigger: CGTACTGCAGTGCGAAGAGCAGAACTGCTCTGGGGG...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCCACCACCACGCACTTaGGCACGTGAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMPPPRT*AREAAA
Trigger: GGCGGCTGCCTCACGTGCGCAAGTGCGTGGTGGTGG...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR GCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGGTCACTCATCTCACATaGCCACCAGCACGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVVTHLT*PPARAH
Trigger: GTGTGCGCGTGCTGGTGGGCATGTGAGATGAGTGAC...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCACCACAGCTGGGTGCTaGAGCCCCACGGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTTTAGC*SPTVLT
Trigger: CGTCAGGACCGTGGGGCTGCAGCACCCAGCTGTGGT...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGCATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWHGGGG*HEGAVA
Trigger: CGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATG...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CCA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLTGSLP*ACWSPG
Trigger: GCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGT...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGACTCCCGACACACGGTaGCAGGCTCTCAACCAGACA +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVTPDTR*QALNQT
Trigger: TGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGT...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGGCTGTCCGCCCAGGTaGCGCCTTGGGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPGCPPR*RLGQSW
Trigger: CCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGCTGTCCGCCCAGGTaGCGCCTTGGGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDGCPPR*RLGQSW
Trigger: CCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCC...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCGCCATGGAGAGCTCCTaGCTGTCCGCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAAMESS*LSAQVA
Trigger: CGCCACCTGGGCGGACAGCCAGGAGCTCTCCATGGC...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCCAGGCAGCCTGGCCATaGAGAGCTCCTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QHPSPHCAPRPELTHTQAQAAWP*RAPGCP
Trigger: CGGACAGCCAGGAGCTCTCCATGGCCAGGCTGCCTG...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGGGCCCCTGCCTGCCCTaGGGCCACCCTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMGPCLP*GHPGTV
Trigger: TACTGTTCCAGGGTGGCCCCAGGGCAGGCAGGGGCC...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAAGGCGCAGGCATAGTGTaGCCCCTGCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKGAGIV*PLPALG
Trigger: CCCCAGGGCAGGCAGGGGCCACACTATGCCTGCGCC...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGGGCTGGCCAGGCCATTaGGAAACGAGGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQGWPGH*ETRPRP
Trigger: CGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCC...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR TCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGCATAGTCGAAGCGGATaGGGCTCAGGTAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: SSWLSAQVAPWAELALHKHSRSG*GSGRRR
Trigger: ACGTCTCCTACCTGAGCCTCATCCGCTTCGACTATG...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGTGTGTGGGGACCCTGTaGGGTTTGCAGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQCVGTL*GLQEAG
Trigger: GCCCGCCTCCTGCAAACCTCACAGGGTCCCCACACA...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGTGTGGACCAGAACCATaGATTGAGGGACACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVCGPEP*IEGHPG
Trigger: GCCTGGGTGTCCCTCAATGCATGGTTCTGGTCCACA...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000619169.4
CDS-3UTR GCA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACTGACCACAGCTGGGTaGTGCAGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRLTTAG*CSPTVL
Trigger: CAGGACCGTGGGGCTGCAGCACCCAGCTGTGGTCAG...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR GCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTCCACCACCACGCACTTaGGCACGTGAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPPPPRT*AREAAA
Trigger: GGCGGCTGCCTCACGTGCGCAAGTGCGTGGTGGTGG...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR GCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCTCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: QHPSPHCAPRPELTHTQASLPWA*WSPGPE
Trigger: TTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGA...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGACGGCCCTGTCACCTATaGACTCAGCCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGRPCHL*TQPGPH
Trigger: GTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCG...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGCACCCGTCTCCACACTaGGCACCTAGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWHPSPH*APRPEL
Trigger: GAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTG...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGAGGACCCTGTGAGGTTTaGAGGAGGCGGGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGGPCEV*RRRAKG
Trigger: CCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGAGGGCAGGATCCCCACTaGGGCAGACTCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRGQDPH*GRLAPR
Trigger: CCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGGGCAGGATCCCCACTaGGGCAGACTCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPGQDPH*GRLAPR
Trigger: CCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCGGCCTCCTGGGAACCTaGCTAGGGCAATGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTGLLGT*LGQWSG
Trigger: CCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCC...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCTGTCCGCCCAGGTaGCGCCTTGGGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGEGCPPR*RLGQSW
Trigger: CCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCC...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAAGCCATGGAGAGCTCCTaGCTGTCCGCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKAMESS*LSAQVA
Trigger: CGCCACCTGGGCGGACAGCCAGGAGCTCTCCATGGC...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGCCATGGAGAGCTCCTaGCTGTCCGCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAAMESS*LSAQVA
Trigger: CGCCACCTGGGCGGACAGCCAGGAGCTCTCCATGGC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGCCATGGAGAGCTCCTaGCTGTCCGCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPAMESS*LSAQVA
Trigger: CGCCACCTGGGCGGACAGCCAGGAGCTCTCCATGGC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTGAGGGCCAACAGGGGGTGGGCTGGCCACATGATTCTGGGCCCACATCCTTCACAGGCAGCCTGGCCATaGAGAGCTCCTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VRANRGWAGHMILGPHPSQAAWP*RAPGCP
Trigger: CGGACAGCCAGGAGCTCTCCATGGCCAGGCTGCCTG...TGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGCAGGCAGCCTGGCCATaGAGAGCTCCTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQQAAWP*RAPGCP
Trigger: CGGACAGCCAGGAGCTCTCCATGGCCAGGCTGCCTG...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCGCCCTGGGGCCACCCTaGAACAGTAAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSALGPP*NSKTLW
Trigger: CCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGGCCCCTGCCTGCCCTaGGGCCACCCTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAGPCLP*GHPGTV
Trigger: TACTGTTCCAGGGTGGCCCCAGGGCAGGCAGGGGCC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGGCCCCTGCCTGCCCTaGGGCCACCCTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAGPCLP*GHPGTV
Trigger: TACTGTTCCAGGGTGGCCCCAGGGCAGGCAGGGGCC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CAA 72 bp GTGGCAGGCTCTCAACCAGACAGCAGCACAGGATCCTaGCCCTGGGCTTGCTGGAGCCCTGGCCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: VAGSQPDSSTGS*PWACWSPGPER
Trigger: CCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGGGACAGGGATGGTGCTaGTGTGCCAGATGGCATGGG +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWGQGWC*CARWHG
Trigger: CCCATGCCATCTGGCACATCAGCACCATCCCTGTCC...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCGGCCACCCGAGTCCCTaGGGTTGGAGTCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTGHPSP*GWSPSI
Trigger: TATGCTAGGACTCCAACCTCAGGGACTCGGGTGGCC...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGCCACCACACCACGTTaGCCAGGCCTGACGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPATTPR*PGLTQH
Trigger: GTGCTGCGTCAGGCCTGGTCAACGTGGTGTGGTGGC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619169.4
CDS-3UTR GCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGGCTGGCACGAAGGTaGGGTAGCGGCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTRLARR*GSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCT...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR GCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGCCACCACCACGCACTTaGGCACGTGAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGEPPPRT*AREAAA
Trigger: GGCGGCTGCCTCACGTGCGCAAGTGCGTGGTGGTGG...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR GCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCACACACCCAGGCCCATaGTCACGGCCCTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTTHPGP*SRPCHL
Trigger: TAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGTGT...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACCCGTCTCCACACTaGGCACCTAGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMHPSPH*APRPEL
Trigger: GAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTG...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCACCACAGCTGGGTGCTaGAGCCCCACGGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVATTAGC*SPTVLT
Trigger: CGTCAGGACCGTGGGGCTGCAGCACCCAGCTGTGGT...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACGCCATCCTTTCTCCCTaGCTCGCCGCCGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDAILSP*LAAGGG
Trigger: TCCTCCCCCGGCGGCGAGCCAGGGAGAAAGGATGGC...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CACTCTCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGCCATCCTTTCTCCCTaGCTCGCCGCCGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HSRVPDAGRPSLEQTPRLAILSP*LAAGGG
Trigger: TCCTCCCCCGGCGGCGAGCCAGGGAGAAAGGATGGC...CAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATCATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDHGGGG*HEGAVA
Trigger: CGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATG...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 4 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSRANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTGAGGGCCAACAGGGGGTGGGCTGGCCACATGATTCTGGGCCCACATCCTTCAGGCCTCCTGGGAACCTaGCTAGGGCAATGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VRANRGWAGHMILGPHPSGLLGT*LGQWSG
Trigger: CCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCC...TGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGTTGCCCTGGGCTTGCTaGAGCCCTGGCCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQLPWAC*SPGPER
Trigger: CCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAA...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCCCGAGGGGCTGCTTCTaGAGGGCACTGTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAPRGCF*RALLCG
Trigger: CCCACACAACAGTGCCCTCCAGAAGCAGCCCCTCGG...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CACTCTCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGGCCCCTGCCTGCCCTaGGGCCACCCTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: HSRVPDAGRPSLEQTPRLGPCLP*GHPGTV
Trigger: TACTGTTCCAGGGTGGCCCCAGGGCAGGCAGGGGCC...CAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGAGGGCTGCTGGTAAATaGCAGGGGTCACCTTTACCA +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVRAAGK*QGSPLP
Trigger: TGGTAAAGGTGACCCCTGCCATTTACCAGCAGCCCT...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGACCAGAACCATGCATTaGGGGACACCCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWTRTMH*GTPRRR
Trigger: CCTTCGCCTGGGTGTCCCTCAATGCATGGTTCTGGT...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300658.9
CDS-3UTR TCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCGGACAGGGATGGTGCTaGTGTGCCAGATGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAGQGWC*CARWHG
Trigger: CCCATGCCATCTGGCACATCAGCACCATCCCTGTCC...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR TCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGCTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVLALHK*LLMVTG
Trigger: TCCTGTCACCATCAATAATCACTTGTGGAGCGCCAG...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp AGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGTGTGTGGGGACCCTGTaGGGTTTGCAGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RCWEAFPRTDSKAGEGQQCVGTL*GLQEAG
Trigger: GCCCGCCTCCTGCAAACCTCACAGGGTCCCCACACA...CTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCTTCTGCTCTTCGCACTaGAGTACGCAGTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLFCSSH*STQSRY
Trigger: GTACCGCGACTGCGTACTGCAGTGCGAAGAGCAGAA...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRRGHGR*RLLKEQ
Trigger: CTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCG...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR GCA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCTGTGGACCAGAACCATaGATTGAGGGACACCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLCGPEP*IEGHPG
Trigger: GCCTGGGTGTCCCTCAATGCATGGTTCTGGTCCACA...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300658.9
CDS-3UTR GCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTAGCAGGGACAGCCCCTaGAGCAGCAAGACCACCACC +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPSRDSP*SSKTTT
Trigger: GGTGGTGGTCTTGCTGCTGCAGGGGCTGTCCCTGCT...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR GCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTTCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPSLPWA*WSPGPE
Trigger: TTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGA...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GGGCAGGATCCCCACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACGGCCCTGTCACCTATaGACTCAGCCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GQDPHWGRLAPRSSVQLERPCHL*TQPGPH
Trigger: GTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCG...TTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR GCA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGCGGCCCTGTCACCTATaGACTCAGCCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQRPCHL*TQPGPH
Trigger: GTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCG...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGACACACCCAGGCCCATaGTCACGGCCCTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMTHPGP*SRPCHL
Trigger: TAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGTGT...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTCACCCGTCTCCACACTaGGCACCTAGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPHPSPH*APRPEL
Trigger: GAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTG...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCACCAGACAGGGAACATaGACACAGGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QHPSPHCAPRPELTHTQATRQGT*TQAAWP
Trigger: TGGCCAGGCTGCCTGTGTGCATGTTCCCTGTCTGGT...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCACCAGACAGGGAACATaGACACAGGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSTRQGT*TQAAWP
Trigger: TGGCCAGGCTGCCTGTGTGCATGTTCCCTGTCTGGT...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGCACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQHRCGT*GRRLAR
Trigger: TCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTG...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGAAGGCCACACAGGTGTaGTACATGGGGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWKATQV*YMGEEA
Trigger: AGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTT...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGCCTCCTGGGAACCTaGCTAGGGCAATGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDGLLGT*LGQWSG
Trigger: CCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCC...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCATTGCCCTGGGCTTGCTaGAGCCCTGGCCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQALPWAC*SPGPER
Trigger: CCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAA...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALGPPWNSKTLWEGKKPDTGSLP*ACWSPG
Trigger: GCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGT...GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCACTCCCGACACACGGTaGCAGGCTCTCAACCAGACA +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTTPDTR*QALNQT
Trigger: TGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGT...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGCCTATGCACTCAGCCTaGCCCACACTCCCGACACAC +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQPMHSA*PTLPTH
Trigger: GTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCGAGGGGCTGCTTCTaGAGGGCACTGTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAPRGCF*RALLCG
Trigger: CCCACACAACAGTGCCCTCCAGAAGCAGCCCCTCGG...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCCTATGGCAAAGGGGCTaGCAGCAGGGGAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTLWQRG*QQGNGG
Trigger: ACCTCCATTCCCCTGCTGCCAGCCCCTTTGCCATAG...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGCCCTGGGGCCACCCTaGAACAGTAAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAALGPP*NSKTLW
Trigger: CCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGCCCTGGGGCCACCCTaGAACAGTAAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPALGPP*NSKTLW
Trigger: CCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGCCGATGCCGGCTCTTaGAAGAACAGGAACCGGGAG +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAADAGS*KNRNRE
Trigger: CTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR TCA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCAGGCTGGCCAGGCCATTaGGAAACGAGGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPGWPGH*ETRPRP
Trigger: CGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCC...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR TCA 90 bp GCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 4 (lower is better)
Translates to: ALGPPWNSKTLWEGKKPDGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GTGAGGGCCAACAGGGGGTGGGCTGGCCACATGATTCTGGGCCCACATCCTTCATGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VRANRGWAGHMILGPHPSWGESP*TLAGQR
Trigger: TCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCA...TGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGAGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGCCACCCGAGTCCCTaGGGTTGGAGTCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDGHPSP*GWSPSI
Trigger: TATGCTAGGACTCCAACCTCAGGGACTCGGGTGGCC...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGGCCACCCGAGTCCCTaGGGTTGGAGTCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAGHPSP*GWSPSI
Trigger: TATGCTAGGACTCCAACCTCAGGGACTCGGGTGGCC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCAGGCTGGCACGAAGGTaGGGTAGCGGCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVARLARR*GSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCT...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR GCA 90 bp AGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGAGCAGGGACAGCCCCTaGAGCAGCAAGACCACCACC +
Preference number: 4 (lower is better)
Translates to: RCWEAFPRTDSKAGEGQQSRDSP*SSKTTT
Trigger: GGTGGTGGTCTTGCTGCTGCAGGGGCTGTCCCTGCT...CTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR GCA 90 bp GGGCAGGATCCCCACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAAACACACCCAGGCCCATaGTCACGGCCCTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: GQDPHWGRLAPRSSVQLETHPGP*SRPCHL
Trigger: TAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGTGT...TTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR GCA 90 bp AGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGACCCTGTGAGGTTTaGAGGAGGCGGGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RCWEAFPRTDSKAGEGQQGPCEV*RRRAKG
Trigger: CCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC...CTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGACCATTTTCCTTCCTCTaGCTCCGAGGGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGPFSFL*LRGAAS
Trigger: AGAAGCAGCCCCTCGGAGGCAGAGGAAGGAAAATGG...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGACCCAGAAGAGCGGTaGGAAGTCAAGCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQDPEER*EVKQLE
Trigger: CTCGAGCTGCTTGACTTCCCACCGCTCTTCTGGGTC...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCATGTGCCAGATGGCATaGGCATCCAGGACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSMCQMA*ASRTQK
Trigger: CTTCTGGGTCCTGGATGCCCATGCCATCTGGCACAT...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCAGGGCAGGATCCCCACTaGGGCAGACTCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCAGQDPH*GRLAPR
Trigger: CCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGACCAATCCCAGCAGCTTaGTCCCTCAAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGPIPAA*SLKIPW
Trigger: CCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGG...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCTCCTGGGAACCTaGCTAGGGCAATGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGEGLLGT*LGQWSG
Trigger: CCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCC...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGTTGCCCTGGGCTTGCTaGAGCCCTGGCCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RCWEAFPRTDSKAGEGQQLPWAC*SPGPER
Trigger: CCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAA...CTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAACAGGATCCTTGCCCTaGGCTTGCTGGAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPTGSLP*ACWSPG
Trigger: GCCAGGGCTCCAGCAAGCCCAGGGCAAGGATCCTGT...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTCCTATGCACTCAGCCTaGCCCACACTCCCGACACAC +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPPMHSA*PTLPTH
Trigger: GTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACGCCCTGGGGCCACCCTaGAACAGTAAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDALGPP*NSKTLW
Trigger: CCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCGGCGCAGGCATAGTGTaGCCCCTGCCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSGAGIV*PLPALG
Trigger: CCCCAGGGCAGGCAGGGGCCACACTATGCCTGCGCC...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTACCAGAACCATGCATTaGGGGACACCCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPTRTMH*GTPRRR
Trigger: CCTTCGCCTGGGTGTCCCTCAATGCATGGTTCTGGT...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000619169.4
CDS-3UTR TCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCCATAGTCGAAGCGGATaGGGCTCAGGTAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAHSRSG*GSGRRR
Trigger: ACGTCTCCTACCTGAGCCTCATCCGCTTCGACTATG...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp CACTCTCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGGACAGGGATGGTGCTaGTGTGCCAGATGGCATGGG +
Preference number: 4 (lower is better)
Translates to: HSRVPDAGRPSLEQTPRLGQGWC*CARWHG
Trigger: CCCATGCCATCTGGCACATCAGCACCATCCCTGTCC...CAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp AGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 4 (lower is better)
Translates to: RCWEAFPRTDSKAGEGQQGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...CTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCATGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAWGESP*TLAGQR
Trigger: TCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCA...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGTGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQWGESP*TLAGQR
Trigger: TCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCA...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGGGGCAATGGTCAGGGTaGAACTCCTTCCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMGQWSG*NSFPIP
Trigger: TGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCC...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGTTCTGCTCTTCGCACTaGAGTACGCAGTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMFCSSH*STQSRY
Trigger: GTACCGCGACTGCGTACTGCAGTGCGAAGAGCAGAA...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp CCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAACTGACCACAGCTGGGTaGTGCAGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSRSHGENRREPWLAKEQLTTAG*CSPTVL
Trigger: CAGGACCGTGGGGCTGCAGCACCCAGCTGTGGTCAG...TTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR GCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATCTCTCGAGTCCCAGATaGTGGGAGGCCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDLSSPR*WEAFPR
Trigger: TCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAG...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCTCTCGAGTCCCAGATaGTGGGAGGCCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: ALGPPWNSKTLWEGKKPDLSSPR*WEAFPR
Trigger: TCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAG...GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GAGGAAACAGGCAGCTGTCCTCCCGGTAGAGCTAAGAGCACACTCAGTTCCACCCGGCCCTGTCACCTATaGACTCAGCCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: EETGSCPPGRAKSTLSSTRPCHL*TQPGPH
Trigger: GTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCG...GGTGGAACTGAGTGTGCTCTTAGCTCTACCGGGAGGACAGCTGCCTGTTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAAGTCACTCATCTCACATaGCCACCAGCACGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKVTHLT*PPARAH
Trigger: GTGTGCGCGTGCTGGTGGGCATGTGAGATGAGTGAC...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCACCAGACAGGGAACATaGACACAGGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVATRQGT*TQAAWP
Trigger: TGGCCAGGCTGCCTGTGTGCATGTTCCCTGTCTGGT...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCCATTTTCCTTCCTCTaGCTCCGAGGGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMPFSFL*LRGAAS
Trigger: AGAAGCAGCCCCTCGGAGGCAGAGGAAGGAAAATGG...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTTCAACCACGGAGACTaGCTTTGGGATGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSWLSAQVAPWAELALHKFNHGD*LWDGKF
Trigger: AAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAA...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCTGTGGACCAGAACCATaGATTGAGGGACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTCGPEP*IEGHLA
Trigger: GGCAAGGTGTCCCTCAATGCATGGTTCTGGTCCACA...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378011.8
CDS-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGACCCAGAAGAGCGGTaGGAAGTCAAGCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVADPEER*EVKQLE
Trigger: CTCGAGCTGCTTGACTTCCCACCGCTCTTCTGGGTC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR CCA 90 bp CTGCCTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAAGACCCAGAAGAGCGGTaGGAAGTCAAGCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LPALGPPWNSKTLWEGKKDPEER*EVKQLE
Trigger: CTCGAGCTGCTTGACTTCCCACCGCTCTTCTGGGTC...TTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR CCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGERANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCCCAACCTCTCAACTGTaGACACATTCACCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: QHPSPHCAPRPELTHTQAPTSQL*THSPAV
Trigger: GACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGG...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAGCACAGGACCAACCTCTCAACTGTaGACACATTCACCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GPHSRHTVAGSQPDSSTGPTSQL*THSPAV
Trigger: GACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGG...TCCTGTGCTGCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTGAGGGCCAACAGGGGGTGGGCTGGCCACATGATTCTGGGCCCACATCCTTCACGCCTTGGGCAGAGCTaGCGCTCCACAAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VRANRGWAGHMILGPHPSRLGQS*RSTSDY
Trigger: ATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCG...TGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCAGGAGAAAAGGAGGATaGAGAGAGCCCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPARRKGG*REPQPS
Trigger: GGATGGCTGGGGCTCTCTCCATCCTCCTTTTCTCCT...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp TCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCCTGGCGGGAGCGGAAGTaGTTCAGAGCGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SNLSTVDTFTGSHSSHMPWRERK*FRAPPE
Trigger: CTCTGGGGGCGCTCTGAATCACTTCCGCTCCCGCCA...GGGCATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp TCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTGGCGGGAGCGGAAGTaGTTCAGAGCGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLVWKTVDQNHALRDTLSWRERK*FRAPPE
Trigger: CTCTGGGGGCGCTCTGAATCACTTCCGCTCCCGCCA...GGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR TCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCAGCCGATGCCGGCTCTTaGAAGAACAGGAACCGGGAG +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCAADAGS*KNRNRE
Trigger: CTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGC...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR TCA 90 bp CTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGGCTGGCCAGGCCATTaGGAAACGAGGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: LVWKTVDQNHALRDTLSSGWPGH*ETRPRP
Trigger: CGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCC...TGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR TCA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCCTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTLALHK*LLMVTG
Trigger: TCCTGTCACCATCAATAATCACTTGTGGAGCGCCAG...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCTGTGTGGGGACCCTGTaGGGTTTGCAGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSCVGTL*GLQEAG
Trigger: GCCCGCCTCCTGCAAACCTCACAGGGTCCCCACACA...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTTTCTGCTCTTCGCACTaGAGTACGCAGTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPFCSSH*STQSRY
Trigger: GTACCGCGACTGCGTACTGCAGTGCGAAGAGCAGAA...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp TCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCCTGACCACAGCTGGGTaGTGCAGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SLVWKTVDQNHALRDTLSLTTAG*CSPTVL
Trigger: CAGGACCGTGGGGCTGCAGCACCCAGCTGTGGTCAG...GGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR GCA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACCTCTCGAGTCCCAGATaGTGGGAGGCCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDLSSPR*WEAFPR
Trigger: TCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAG...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCATCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPSLPWA*WSPGPE
Trigger: TTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGA...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGTCACTCATCTCACATaGCCACCAGCACGCGCACAC +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGEVTHLT*PPARAH
Trigger: GTGTGCGCGTGCTGGTGGGCATGTGAGATGAGTGAC...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCATTTTCCTTCCTCTaGCTCCGAGGGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVAPFSFL*LRGAAS
Trigger: AGAAGCAGCCCCTCGGAGGCAGAGGAAGGAAAATGG...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTTCGAGTCCCAGATGCTaGGAGGCCTTCCCTAGAACA +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPSSPRC*EAFPRT
Trigger: TGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGAGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 4 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAATCGCCGTGAACCTTaGCTGGCCAAAGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSNRREP*LAKEQA
Trigger: TGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATT...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCACCAATCCCAGCAGCTTaGTCCCTCAAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAPIPAA*SLKIPW
Trigger: CCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGG...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAACTCCCGACACACGGTaGCAGGCTCTCAACCAGACA +
Preference number: 4 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPTPDTR*QALNQT
Trigger: TGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGT...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATCGCCTTGGGCAGAGCTaGCGCTCCACAAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDRLGQS*RSTSDY
Trigger: ATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCG...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAAGGAGAAAAGGAGGATaGAGAGAGCCCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQARRKGG*REPQPS
Trigger: GGATGGCTGGGGCTCTCTCCATCCTCCTTTTCTCCT...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATAGGAGAAAAGGAGGATaGAGAGAGCCCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDRRKGG*REPQPS
Trigger: GGATGGCTGGGGCTCTCTCCATCCTCCTTTTCTCCT...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGAGGAGAAAAGGAGGATaGAGAGAGCCCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQRRKGG*REPQPS
Trigger: GGATGGCTGGGGCTCTCTCCATCCTCCTTTTCTCCT...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTTCCATTCTATTCCTGTaGGGCAGGAACATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPSILFL*GRNMPG
Trigger: CCCTGGCATGTTCCTGCCCCACAGGAATAGAATGGA...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGTCCATTCTATTCCTGTaGGGCAGGAACATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQSILFL*GRNMPG
Trigger: CCCTGGCATGTTCCTGCCCCACAGGAATAGAATGGA...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGTGGCGGGAGCGGAAGTaGTTCAGAGCGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMWRERK*FRAPPE
Trigger: CTCTGGGGGCGCTCTGAATCACTTCCGCTCCCGCCA...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GGAGACGTGCACGGTCAGCATGAGCAGCAGGAGAGCCCGGAAGGCACTGACCACAGATTGAGTGTAGGATaGCAGTGGAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: GDVHGQHEQQESPEGTDHRLSVG*QWRHRS
Trigger: ACTTCTGTGCCTCCACTGTCATCCTACACTCAATCT...GTGGTCAGTGCCTTCCGGGCTCTCCTGCTGCTCATGCTGACCGTGCACGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR GCA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCAACACACCCAGGCCCATaGTCACGGCCCTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPTHPGP*SRPCHL
Trigger: TAGGTGACAGGGCCGTGAGCATGGGCCTGGGTGTGT...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCAGTCACTCATCTCACATaGCCACCAGCACGCGCACAC +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCAVTHLT*PPARAH
Trigger: GTGTGCGCGTGCTGGTGGGCATGTGAGATGAGTGAC...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCGGACCCTGTGAGGTTTaGAGGAGGCGGGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSGPCEV*RRRAKG
Trigger: CCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCTTCAACCACGGAGACTaGCTTTGGGATGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLFNHGD*LWDGKF
Trigger: AAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAA...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGGGGGTGGGCTGGAGCAAAAATCCAGTCTaGTTCAACCACGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: AFPRTDSKAGEGQQGVGWSKNPV*FNHGDC
Trigger: GCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCT...CCAGCCCACCCCCTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTGAGGGCCAACAGGGGGTGGGCTGGCCACATGATTCTGGGCCCACATCCTTCACTGAAAAAGAGGACGTaGACAGGGATGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VRANRGWAGHMILGPHPSLKKRT*TGMVLM
Trigger: CATCAGCACCATCCCTGTCCACGTCCTCTTTTTCAG...TGAAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCTTGCCCTGGGCTTGCTaGAGCCCTGGCCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSLPWAC*SPGPER
Trigger: CCTTTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAA...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAACCTATGCACTCAGCCTaGCCCACACTCCCGACACAC +
Preference number: 4 (lower is better)
Translates to: PSRSHGENRREPWLAKEQPMHSA*PTLPTH
Trigger: GTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG...TTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCACCAACCTCTCAACTGTaGACACATTCACCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAPTSQL*THSPAV
Trigger: GACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGG...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CACTCTCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGCGCCTTGGGCAGAGCTaGCGCTCCACAAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: HSRVPDAGRPSLEQTPRLRLGQS*RSTSDY
Trigger: ATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCG...CAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCCCGAGGGGCTGCTTCTaGAGGGCACTGTTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSPRGCF*RALLCG
Trigger: CCCACACAACAGTGCCCTCCAGAAGCAGCCCCTCGG...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACTATGGCAAAGGGGCTaGCAGCAGGGGAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCALWQRG*QQGNGG
Trigger: ACCTCCATTCCCCTGCTGCCAGCCCCTTTGCCATAG...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCACCCAAAATCAGGCTATaGCAAAGGGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPPKIRL*QRGWQQ
Trigger: CTGCTGCCAGCCCCTTTGCCATAGCCTGATTTTGGG...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGCCCAAAATCAGGCTATaGCAAAGGGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGEPKIRL*QRGWQQ
Trigger: CTGCTGCCAGCCCCTTTGCCATAGCCTGATTTTGGG...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGGCAGGATCCCCACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAAAGGGCTGCTGGTAAATaGCAGGGGTCACCTTTACCA +
Preference number: 4 (lower is better)
Translates to: GQDPHWGRLAPRSSVQLERAAGK*QGSPLP
Trigger: TGGTAAAGGTGACCCCTGCCATTTACCAGCAGCCCT...TTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR CCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTTCCATTCTATTCCTGTaGGGCAGGAACATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPSILFL*GRNMPG
Trigger: CCCTGGCATGTTCCTGCCCCACAGGAATAGAATGGA...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCTCCATTCTATTCCTGTaGGGCAGGAACATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVASILFL*GRNMPG
Trigger: CCCTGGCATGTTCCTGCCCCACAGGAATAGAATGGA...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGAGACTGCCTTTGGGATaGAAAGTTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMRLPLG*KVSGAP
Trigger: GGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCT...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGAGTCCATTTTCTCTGTaGGGTCAGTGTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQSPFSL*GQCPWC
Trigger: ACACCAGGGACACTGACCTCACAGAGAAAATGGACT...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR TCA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMLELVL*FLQQVQ
Trigger: CTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAG...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCGGTGGGCTGGCCACATaGTTCTGGGCCCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSGGLAT*FWAHIL
Trigger: AAGGATGTGGGCCCAGAATCATGTGGCCAGCCCACC...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GGGCAGGATCCCCACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: GQDPHWGRLAPRSSVQLELALHK*LLMVTG
Trigger: TCCTGTCACCATCAATAATCACTTGTGGAGCGCCAG...TTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR TCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTTGTGTGGGGACCCTGTaGGGTTTGCAGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFCVGTL*GLQEAG
Trigger: GCCCGCCTCCTGCAAACCTCACAGGGTCCCCACACA...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACACCAGAACCATGCATTaGGGGACACCTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDTRTMH*GTPCHG
Trigger: TCCATGGCAAGGTGTCCCTCAATGCATGGTTCTGGT...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378011.8
CDS-3UTR GCA 90 bp ACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACTTGTCCTCTGATCGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: TGADSLQGLQSSLNLSSDRGHGR*RLLKEQ
Trigger: CTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCG...ATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR GCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGAGCAGGGACAGCCCCTaGAGCAGCAAGACCACCACC +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMSRDSP*SSKTTT
Trigger: GGTGGTGGTCTTGCTGCTGCAGGGGCTGTCCCTGCT...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR GCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGTCCTTGCCCTGGGCTTaGTGGAGCCCTGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMSLPWA*WSPGPE
Trigger: TTCAGGGCCAGGGCTCCAGCAAGCCCAGGGCAAGGA...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATAGGATTCCCTCATCCTaGTCCAACCTCTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDRIPSS*SNLSTV
Trigger: CACAGTTGAGAGGTTGGAGCAGGATGAGGGAATCCT...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCATTTTCCTTCCTCTaGCTCCGAGGGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCAPFSFL*LRGAAS
Trigger: AGAAGCAGCCCCTCGGAGGCAGAGGAAGGAAAATGG...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCAGCAAAAATCCAGTCTaGTTCAACCACGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPASKNPV*FNHGDC
Trigger: GCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCT...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCAACCACAGCTGGGTGCTaGAGCCCCACGGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPTTAGC*SPTVLT
Trigger: CGTCAGGACCGTGGGGCTGCAGCACCCAGCTGTGGT...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR CCA 90 bp GTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTCACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: VSLVWKTVDQNHALRDTLHRCGT*GRRLAR
Trigger: TCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTG...AAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTGGGCAGGATCCCCACTaGGGCAGACTCGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFGQDPH*GRLAPR
Trigger: CCTTGGAGCGAGTCTGCCCCAGTGGGGATCCTGCCC...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCAGGGCCAACAGGGGGTaGGCTGGCCACATGATTCTG +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSRANRG*AGHMIL
Trigger: CAGAATCATGTGGCCAGCCCACCCCCTGTTGGCCCT...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GAGGAAACAGGCAGCTGTCCTCCCGGTAGAGCTAAGAGCACACTCAGTTCCACCTCGAGTCCCAGATGCTaGGAGGCCTTCCCTAGAACA +
Preference number: 4 (lower is better)
Translates to: EETGSCPPGRAKSTLSSTSSPRC*EAFPRT
Trigger: TGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA...GGTGGAACTGAGTGTGCTCTTAGCTCTACCGGGAGGACAGCTGCCTGTTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATAATCGCCGTGAACCTTaGCTGGCCAAAGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDNRREP*LAKEQA
Trigger: TGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATT...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTCAGGCAGCCTGGCCATaGAGAGCTCCTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFQAAWP*RAPGCP
Trigger: CGGACAGCCAGGAGCTCTCCATGGCCAGGCTGCCTG...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GAGGAAACAGGCAGCTGTCCTCCCGGTAGAGCTAAGAGCACACTCAGTTCCACCCCCAAAATCAGGCTATaGCAAAGGGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EETGSCPPGRAKSTLSSTPKIRL*QRGWQQ
Trigger: CTGCTGCCAGCCCCTTTGCCATAGCCTGATTTTGGG...GGTGGAACTGAGTGTGCTCTTAGCTCTACCGGGAGGACAGCTGCCTGTTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAGGGCTGCTGGTAAATaGCAGGGGTCACCTTTACCA +
Preference number: 4 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPRAAGK*QGSPLP
Trigger: TGGTAAAGGTGACCCCTGCCATTTACCAGCAGCCCT...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCAGGTAGAGCCCAACGGTaGCCCACATACACTCATACT +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCAGRAQR*PTYTHT
Trigger: AGTATGAGTGTATGTGGGTCACCGTTGGGCTCTACC...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTAGATTGAGTGTAGGATaGCAGTGGAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPRLSVG*QWRHRS
Trigger: ACTTCTGTGCCTCCACTGTCATCCTACACTCAATCT...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR TCA 90 bp CTTTCCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCACGCACTTGCGCACGTaGGGCAGCCGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSSDLGGSGIIKNASPTATHLRT*GSRRWF
Trigger: GAACCAGCGGCGGCTGCCTCACGTGCGCAAGTGCGT...GGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR TCA 90 bp GCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCATCTTCCAGAAAGCTaGAAAAGAGGACGTGGACAG +
Preference number: 4 (lower is better)
Translates to: ALGPPWNSKTLWEGKKPDHLPES*KRGRGQ
Trigger: CTGTCCACGTCCTCTTTTTCAGCTTTCTGGAAGATG...GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR TCA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVALELVL*FLQQVQ
Trigger: CTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAG...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGCTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQLELVL*FLQQVQ
Trigger: CTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAG...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTGTCTTCAGTCCAGCTTaGACTTGTCCTCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: VNGRGHLYQGAGIVWPLPVFSPA*TCPLIP
Trigger: AGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGAC...AGGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp TTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCAGGCTGGCACGAAGGTaGGGTAGCGGCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: FLCEVSVPGVENCGPEPCRLARR*GSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCT...GCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR GCA 90 bp TTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCGTTCGATTTTGCCCCTaGAGCCACCCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FLCEVSVPGVENCGPEPCVRFCP*SHPGRL
Trigger: GAGCCTGCCTGGGTGGCTGCAGGGGCAAAATCGAAC...GCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR GCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCACCCAGGGTTCGATTTTaGCCCTGCAGCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPPRVRF*PCSHPG
Trigger: GCCTGGGTGGCTGCAGGGGCAAAATCGAACCCTGGG...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR GCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTCACCCGTCTCCACACTaGGCACCTAGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFHPSPH*APRPEL
Trigger: GAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTG...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGAGGATTCCCTCATCCTaGTCCAACCTCTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGERIPSS*SNLSTV
Trigger: CACAGTTGAGAGGTTGGAGCAGGATGAGGGAATCCT...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCACCAGACAGGGAACATaGACACAGGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSTRQGT*TQAAWP
Trigger: TGGCCAGGCTGCCTGTGTGCATGTTCCCTGTCTGGT...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCTTCAACCACGGAGACTaGCTTTGGGATGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPAFNHGD*LWDGKF
Trigger: AAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAA...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACAGCAAAAATCCAGTCTaGTTCAACCACGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: ALGPPWNSKTLWEGKKPDSKNPV*FNHGDC
Trigger: GCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCT...GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAAGCAAAAATCCAGTCTaGTTCAACCACGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQASKNPV*FNHGDC
Trigger: GCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTGCT...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GGGACACCCTTTCCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: GTPFPQIWEVVVSLRMQAHGGGG*HEGAVA
Trigger: CGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATG...GGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAAGGGTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp AACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGAGGCACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: NCGPEPCIEGHPFLRFGRHRCGT*GRRLAR
Trigger: TCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTG...CCTCCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp AGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTAAGGCCACACAGGTGTaGTACATGGGGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SVPGVENCGPEPCIEGHPKATQV*YMGEEA
Trigger: AGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTT...AGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp ACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACTTGTCCTCTGATAAGGCCACACAGGTGTaGTACATGGGGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TGADSLQGLQSSLNLSSDKATQV*YMGEEA
Trigger: AGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTT...ATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR CCA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCAATGTGCCAGATGGCATaGGCATCCAGGACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPMCQMA*ASRTQK
Trigger: CTTCTGGGTCCTGGATGCCCATGCCATCTGGCACAT...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CCA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACCTGAAAAAGAGGACGTaGACAGGGATGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDLKKRT*TGMVLM
Trigger: CATCAGCACCATCCCTGTCCACGTCCTCTTTTTCAG...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR CCA 90 bp CCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAATCGAGTCCCAGATGCTaGGAGGCCTTCCCTAGAACA +
Preference number: 4 (lower is better)
Translates to: PSRSHGENRREPWLAKEQSSPRC*EAFPRT
Trigger: TGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA...TTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp TCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCCACTCCCGACACACGGTaGCAGGCTCTCAACCAGACA +
Preference number: 4 (lower is better)
Translates to: SNLSTVDTFTGSHSSHMPTPDTR*QALNQT
Trigger: TGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGT...GGGCATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCTATGCACTCAGCCTaGCCCACACTCCCGACACAC +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMPMHSA*PTLPTH
Trigger: GTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp CCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAACGCCTTGGGCAGAGCTaGCGCTCCACAAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: PSRSHGENRREPWLAKEQRLGQS*RSTSDY
Trigger: ATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCG...TTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp TCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCCCTATGGCAAAGGGGCTaGCAGCAGGGGAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: SNLSTVDTFTGSHSSHMPLWQRG*QQGNGG
Trigger: ACCTCCATTCCCCTGCTGCCAGCCCCTTTGCCATAG...GGGCATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATAACAGTAAGACCCTCTaGGAAGGGAAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDNSKTL*EGKKPD
Trigger: GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTT...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp AGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGGGCCAACAGAGACTGCCTTTGGGATaGAAAGTTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RCWEAFPRTDSKAGEGQQRLPLG*KVSGAP
Trigger: GGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCT...CTGTTGGCCCTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGAGACTGCCTTTGGGATaGAAAGTTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGERLPLG*KVSGAP
Trigger: GGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCT...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGGCCGATGCCGGCTCTTaGAAGAACAGGAACCGGGAG +
Preference number: 4 (lower is better)
Translates to: ENCGPEPCIEGHPFLRFGADAGS*KNRNRE
Trigger: CTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGC...CCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR TCA 90 bp GAGGAAACAGGCAGCTGTCCTCCCGGTAGAGCTAAGAGCACACTCAGTTCCACCAGTCCATTTTCTCTGTaGGGTCAGTGTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: EETGSCPPGRAKSTLSSTSPFSL*GQCPWC
Trigger: ACACCAGGGACACTGACCTCACAGAGAAAATGGACT...GGTGGAACTGAGTGTGCTCTTAGCTCTACCGGGAGGACAGCTGCCTGTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGAGATTGAGTGTAGGATaGCAGTGGAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGERLSVG*QWRHRS
Trigger: ACTTCTGTGCCTCCACTGTCATCCTACACTCAATCT...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR TCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCACCAGGCAGGCTCACCTaGCGCAGCACAGGTAGATTG +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPPGRLT*RSTGRL
Trigger: CAATCTACCTGTGCTGCGTCAGGTGAGCCTGCCTGG...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR TCA 90 bp CACTCTCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGCATCTTCCAGAAAGCTaGAAAAGAGGACGTGGACAG +
Preference number: 4 (lower is better)
Translates to: HSRVPDAGRPSLEQTPRLHLPES*KRGRGQ
Trigger: CTGTCCACGTCCTCTTTTTCAGCTTTCTGGAAGATG...CAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR GCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCACGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPRGHGR*RLLKEQ
Trigger: CTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCG...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR GCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCAAGGCTGGCACGAAGGTaGGGTAGCGGCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPRLARR*GSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCT...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR GCA 90 bp ACACACTTTGAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCAAGGATTCCCTCATCCTaGTCCAACCTCTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: THFEATPLPRQHPSPHCARIPSS*SNLSTV
Trigger: CACAGTTGAGAGGTTGGAGCAGGATGAGGGAATCCT...TGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTCAAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp AGCCACGTTGGCCACCAGGTTGTAGCCATAGTCGAAGCGGATGAGGCTCAGGTATGTGGACCAGAACCATaGATTGAGGGACACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHVGHQVVAIVEADEAQVCGPEP*IEGHPF
Trigger: GAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACA...TACCTGAGCCTCATCCGCTTCGACTATGGCTACAACCTGGTGGCCAACGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR CCA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCAGCCGTGAACCTTGGCTaGCCAAAGAACAAGCATCCA +
Preference number: 4 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPAVNLG*PKNKHP
Trigger: TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGC...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GAGGAAACAGGCAGCTGTCCTCCCGGTAGAGCTAAGAGCACACTCAGTTCCACCAATCGCCGTGAACCTTaGCTGGCCAAAGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: EETGSCPPGRAKSTLSSTNRREP*LAKEQA
Trigger: TGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATT...GGTGGAACTGAGTGTGCTCTTAGCTCTACCGGGAGGACAGCTGCCTGTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp ACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACTTGTCCTCTGATCCAATCCCAGCAGCTTaGTCCCTCAAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: TGADSLQGLQSSLNLSSDPIPAA*SLKIPW
Trigger: CCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGG...ATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR CCA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAACAGTAAGACCCTCTaGGAAGGGAAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDNSKTL*EGKKPD
Trigger: GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTT...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
3UTR CAA 72 bp ACTGGGGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTaGAACTTGTCCTCTGATTCCTTCAGCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TGADSLQGLQSS*NLSSDSFSRYR
Trigger: CCTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR TCA 90 bp CTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCACATAGTCGAAGCGGATaGGGCTCAGGTAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: LVWKTVDQNHALRDTLSSHSRSG*GSGRRR
Trigger: ACGTCTCCTACCTGAGCCTCATCCGCTTCGACTATG...TGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR TCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTTGGGGAGAATCGCCGTaGACCTTGGCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFWGESP*TLAGQR
Trigger: TCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCA...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCATTCAACCACGGAGACTaGCTTTGGGATGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPFNHGD*LWDGKF
Trigger: AAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAA...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR GCA 90 bp AGCCACGTTGGCCACCAGGTTGTAGCCATAGTCGAAGCGGATGAGGCTCAGGTATTCAGTTCCTGGCTCTaGATTTCCTGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SHVGHQVVAIVEADEAQVFSSWL*ISCVSL
Trigger: CAAGGACACACAGGAAATGCAGAGCCAGGAACTGAA...TACCTGAGCCTCATCCGCTTCGACTATGGCTACAACCTGGTGGCCAACGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR CCA 90 bp GATGACAGTGGAGGCACAGAAGTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTAAGGCCACACAGGTGTaGTACATGGGGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DDSGGTEVVHFLCEVSVPKATQV*YMGEEA
Trigger: AGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTT...AGGGACACTGACCTCACAGAGAAAATGGACTACTTCTGTGCCTCCACTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCCAAAATCAGGCTATaGCAAAGGGGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMPKIRL*QRGWQQ
Trigger: CTGCTGCCAGCCCCTTTGCCATAGCCTGATTTTGGG...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GAGGAAACAGGCAGCTGTCCTCCCGGTAGAGCTAAGAGCACACTCAGTTCCACCAACAGTAAGACCCTCTaGGAAGGGAAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: EETGSCPPGRAKSTLSSTNSKTL*EGKKPD
Trigger: GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTT...GGTGGAACTGAGTGTGCTCTTAGCTCTACCGGGAGGACAGCTGCCTGTTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCAGGGCTGCTGGTAAATaGCAGGGGTCACCTTTACCA +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSRAAGK*QGSPLP
Trigger: TGGTAAAGGTGACCCCTGCCATTTACCAGCAGCCCT...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp TCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCCCAGGGTTCAGTTCCTaGCTCTGCATTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SLVWKTVDQNHALRDTLSPGFSS*LCISCV
Trigger: CACACAGGAAATGCAGAGCCAGGAACTGAACCCTGG...GGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR TCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCAGTCCATTTTCTCTGTaGGGTCAGTGTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSSPFSL*GQCPWC
Trigger: ACACCAGGGACACTGACCTCACAGAGAAAATGGACT...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR TCA 90 bp CCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAACTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: PSRSHGENRREPWLAKEQLELVL*FLQQVQ
Trigger: CTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAG...TTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCAGTCTTCAGTCCAGCTTaGACTTGTCCTCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPVFSPA*TCPLIP
Trigger: AGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGAC...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR TCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCCTGGCGCTCCACAAGTaGTTATTGATGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSLALHK*LLMVTG
Trigger: TCCTGTCACCATCAATAATCACTTGTGGAGCGCCAG...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR GCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCATTCTGCTCTTCGCACTaGAGTACGCAGTCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPFCSSH*STQSRY
Trigger: GTACCGCGACTGCGTACTGCAGTGCGAAGAGCAGAA...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR CCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTATGTGCCAGATGGCATaGGCATCCAGGACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFMCQMA*ASRTQK
Trigger: CTTCTGGGTCCTGGATGCCCATGCCATCTGGCACAT...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR CCA 90 bp TCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCCCTGAAAAAGAGGACGTaGACAGGGATGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SNLSTVDTFTGSHSSHMPLKKRT*TGMVLM
Trigger: CATCAGCACCATCCCTGTCCACGTCCTCTTTTTCAG...GGGCATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR CCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTCCAATCCCAGCAGCTTaGTCCCTCAAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFPIPAA*SLKIPW
Trigger: CCATGGGATCTTGAGGGACCAAGCTGCTGGGATTGG...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp GTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCAACCAGAACCATGCATTaGGGGACACCCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VVHFLCEVSVPGVENCGPTRTMH*GTPFPQ
Trigger: CTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGT...TGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAAATGGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR TCA 90 bp GAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGACCAGAACCATGCATTaGGGGACACCCTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ENCGPEPCIEGHPFLRFGTRTMH*GTPFPQ
Trigger: CTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGT...CCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR GCA 90 bp AGCCACGTTGGCCACCAGGTTGTAGCCATAGTCGAAGCGGATGAGGCTCAGGTATATTTAGCCTTGCTGTaGCTCAGTTTTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SHVGHQVVAIVEADEAQVYLALL*LSFLIQ
Trigger: CTGGATGAGAAAACTGAGGCACAGCAAGGCTAAATA...TACCTGAGCCTCATCCGCTTCGACTATGGCTACAACCTGGTGGCCAACGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR GCA 90 bp GTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTTCAGTTCCTGGCTCTaGATTTCCTGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSLVWKTVDQNHALRDTLFSSWL*ISCVSL
Trigger: CAAGGACACACAGGAAATGCAGAGCCAGGAACTGAA...AAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp GGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGGATTCCCTCATCCAACAGTAAGACCCTCTaGGAAGGGAAGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: GRAGAPQVIIDGDRIPSSNSKTL*EGKKPD
Trigger: GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTT...GGATGAGGGAATCCTGTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp GATGACAGTGGAGGCACAGAAGTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTCCAGGGTTCAGTTCCTaGCTCTGCATTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DDSGGTEVVHFLCEVSVPPGFSS*LCISCV
Trigger: CACACAGGAAATGCAGAGCCAGGAACTGAACCCTGG...AGGGACACTGACCTCACAGAGAAAATGGACTACTTCTGTGCCTCCACTGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR TCA 90 bp GAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGAGTCCATTTTCTCTGTaGGGTCAGTGTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ENCGPEPCIEGHPFLRFGSPFSL*GQCPWC
Trigger: ACACCAGGGACACTGACCTCACAGAGAAAATGGACT...CCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR TCA 90 bp AACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGAGGAGATTGAGTGTAGGATaGCAGTGGAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: NCGPEPCIEGHPFLRFGRRLSVG*QWRHRS
Trigger: ACTTCTGTGCCTCCACTGTCATCCTACACTCAATCT...CCTCCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR TCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCATCTTCCAGAAAGCTaGAAAAGAGGACGTGGACAG +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMHLPES*KRGRGQ
Trigger: CTGTCCACGTCCTCTTTTTCAGCTTTCTGGAAGATG...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
CDS-3UTR TCA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGGTCTTCAGTCCAGCTTaGACTTGTCCTCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMVFSPA*TCPLIP
Trigger: AGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGAC...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTAATCGCCGTGAACCTTaGCTGGCCAAAGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFNRREP*LAKEQA
Trigger: TGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATT...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTAGACTGCCTTTGGGATaGAAAGTTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFRLPLG*KVSGAP
Trigger: GGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCT...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTAGATTGAGTGTAGGATaGCAGTGGAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFRLSVG*QWRHRS
Trigger: ACTTCTGTGCCTCCACTGTCATCCTACACTCAATCT...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000619169.4
3UTR CAA 72 bp CAAAAATCCAGTCTGCTTCAACCACGGAGACTGCCTTaGGGATGGAAAGTTTCTGGAGCTCCCTCCATTCTA +
Preference number: 4 (lower is better)
Translates to: QKSSLLQPRRLP*GWKVSGAPSIL
Trigger: TAGAATGGAGGGAGCTCCAGAAACTTTCCATCCCAAAGGCAGTCTCCGTGGTTGAAGCAGACTGGATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR TCA 90 bp CTTTCCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGTCCATTTTCTCTGTaGGGTCAGTGTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSSDLGGSGIIKNASPTASPFSL*GQCPWC
Trigger: ACACCAGGGACACTGACCTCACAGAGAAAATGGACT...GGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR GCA 90 bp CTTTCCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCTGTGGACCAGAACCATaGATTGAGGGACACCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSSDLGGSGIIKNASPTACGPEP*IEGHPF
Trigger: GAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACA...GGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp GATGACAGTGGAGGCACAGAAGTAGTCCATTTTCTCTGTGAGGTCAGTGTCCCTTTTCCTGTGTGTCCTTaGGCAAGTTATTTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DDSGGTEVVHFLCEVSVPFPVCP*ASYLAL
Trigger: CAAGGCTAAATAACTTGCCCAAGGACACACAGGAAA...AGGGACACTGACCTCACAGAGAAAATGGACTACTTCTGTGCCTCCACTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
3UTR CAA 72 bp CAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTaGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QNHALRDTLSSD*GGSGIIKNASP
Trigger: AGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CCA 90 bp CCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTTTCCTGTGTGTCCTTaGGCAAGTTATTTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PQIWEVVVSLRMQALQPDFPVCP*ASYLAL
Trigger: CAAGGCTAAATAACTTGCCCAAGGACACACAGGAAA...GTCTGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR GCA 90 bp TCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTGTATTTAGCCTTGCTGTaGCTCAGTTTTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SDLGGSGIIKNASPTARLYLALL*LSFLIQ
Trigger: CTGGATGAGAAAACTGAGGCACAGCAAGGCTAAATA...CAGTCTGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS CCA 90 bp TCGCACTGCAGTACGCAGTCGCGGTACACCGGCTCACGGTCGCCCTaGGAGCCGCTCGCCAGCGCCGCTGCCCCAGCTAGCAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: SHCSTQSRYTGSRSP*EPLASAAAPASRTN
Trigger: GTTGGTCCTGCTAGCTGGGGCAGCGGCGCTGGCGAGCGGCTCCCAGGGCGACCGTGAGCCGGTGTACCGCGACTGCGTACTGCAGTGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000579146.5
ENST00000582276.1
ENST00000584620.5
CDS-3UTR CAA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGAGGCTGGCCAGGCCATaGAGAAACGAGGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SSWLSAQVAPWAELALHKRLARP*RNEATA
Trigger: GGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCT...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CAA 90 bp CAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGGCCCGCCCAGGTGGCGCCTaGGGCAGAGCTGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: QHPSPHCAPRPELTHTQARPGGA*GRAGAP
Trigger: TGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCG...GGCCTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS GCA 90 bp ATGAGCAGCAGGAGAGCCCGGAAGGCACTGACCACAGCTGGGTGCTaGAGCCCCACGGTCCTGCCCCACCGTCCAGGGTTGCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: MSSRRARKALTTAGC*SPTVLPHRPGLLRG
Trigger: CCCTCTGAGCAACCCTGGACGGTGGGGCAGGACCGTGGGGCTGCAGCACCCAGCTGTGGTCAGTGCCTTCCGGGCTCTCCTGCTGCTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309862.10
CDS-3UTR CAA 90 bp GGACCCTGTGAGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCGCCCAGGTGGCGCCTaGGGCAGAGCTGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: GPCEVCRRRAKGHQTGNMRPGGA*GRAGAP
Trigger: TGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCG...CATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCTCACAGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS GCA 90 bp AGCATGAGCAGCAGGAGAGCCCGGAAGGCACTGACCACAGCTGGGTaGTGCAGCCCCACGGTCCTGCCCCACCGTCCAGGGTTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: SMSSRRARKALTTAG*CSPTVLPHRPGLLR
Trigger: TCTGAGCAACCCTGGACGGTGGGGCAGGACCGTGGGGCTGCAGCACCCAGCTGTGGTCAGTGCCTTCCGGGCTCTCCTGCTGCTCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309862.10
CDS CCA 90 bp CACCCAGGCGAAGGCCACACAGGTGTGGTACATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCGGCAGAGCATCACCAGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: HPGEGHTGVVHGGGG*HEGAVAAEHHQAGQ
Trigger: CTGGCCAGCCTGGTGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000580898.5
ENST00000582276.1
CDS-3UTR CAA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGAGCCACCACACCACGTaGACCAGGCCAATAGCCACG +
Preference number: 5 (lower is better)
Translates to: SSWLSAQVAPWAELALHKSHHTT*TRPIAT
Trigger: CGTGGCTATTGGCCTGGTCAACGTGGTGTGGTGGCT...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS CCA 90 bp AAGCCAGGCGAAGGCCACACAGGTGTGGTACATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCGGCAGAGCATCACCAGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: KPGEGHTGVVHGGGG*HEGAVAAEHHQAGQ
Trigger: CTGGCCAGCCTGGTGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS CCA 90 bp CATCCAGGCGAAGGCCACACAGGTGTGGTACATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCGGCAGAGCATCACCAGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: HPGEGHTGVVHGGGG*HEGAVAAEHHQAGQ
Trigger: CTGGCCAGCCTGGTGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS CCA 90 bp TTTCCAGGCGAAGGCCACACAGGTGTGGTACATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCGGCAGAGCATCACCAGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FPGEGHTGVVHGGGG*HEGAVAAEHHQAGQ
Trigger: CTGGCCAGCCTGGTGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429199.6
CDS-3UTR CAA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGA +
Preference number: 5 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLGRCRL*KEQEPG
Trigger: TCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCC...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CAA 90 bp CGACAACACCCGTCTCCACACTGCGCACCTAGGCCTGAGCTCACACACACCCAGAGGCTGGCCAGGCCATaGAGAAACGAGGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RQHPSPHCAPRPELTHTQRLARP*RNEATA
Trigger: GGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCT...CTGGGTGTGTGTGAGCTCAGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CAA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CAA 90 bp GGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCCCTGCCAGCAGCACAGGATCCTaGCCCTGGGCTTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GKWQGSPLPGRRHSVAPASSTGS*PWACWS
Trigger: GCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCT...GGCAGGGGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS TCA 90 bp CGAAGGTGCGGTAGCGGCAGAGCATCACCAGGCTGGCCAGGCCATTaGGAAACGAGGCCACGGCCGATGCCGGCTCTTGAAAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRCGSGRASPGWPGH*ETRPRPMPALERTG
Trigger: TCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCTGGTGATGCTCTGCCGCTACCGCACCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000580898.5
ENST00000582276.1
ENST00000584620.5
ENST00000584856.1
CDS GCA 90 bp CATCACCAGGCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAGGAACCGGGAGAAGGGCCACTTGCC +
Preference number: 5 (lower is better)
Translates to: HHQAGQAIEKRGHGR*RLLKEQEPGEGPLA
Trigger: GGCAAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCTGGTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000584620.5
ENST00000584856.1
CDS-3UTR CAA 90 bp AGCTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGCAGTCCAGCTTGAACTaGTCCTCTGATTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSWLSAQVAPWAELALHKQSSLN*SSDSFS
Trigger: GCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTG...CTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CAA 90 bp CTCCTGGCTGTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGCAGTCCAGCTTGAACTaGTCCTCTGATTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLAVRPGGALGRAGAPQVQSSLN*SSDSFS
Trigger: GCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTG...CACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGACAGCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CAA 90 bp CTGCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGAGCAGCACAGGATCCTaGCCCTGGGCTTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LPWGHPGTVRPSGKGRNQSSTGS*PWACWS
Trigger: GCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCT...CTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS GCA 90 bp CATCACCAGGCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAGGAACCGGGAGAAGGGCCACTGCTA +
Preference number: 5 (lower is better)
Translates to: HHQAGQAIEKRGHGR*RLLKEQEPGEGPLL
Trigger: TAGCAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCTGGTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582276.1
CDS CCA 90 bp GTCATCTTCCAGAAAGCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: VIFQKARRRPHRCGT*GRRLARRCGSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGCTTTCTGGAAGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS CCA 90 bp GCCTCAGTTTTCTCATCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: ASVFSSRRRPHRCGT*GRRLARRCGSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGATGAGAAAACTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CAA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCCTAGACTCATGTAGATaGGCTGGCGGGAGCGGAAGT +
Preference number: 5 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTLDSCR*AGGSGS
Trigger: ACTTCCGCTCCCGCCAGCCAATCTACATGAGTCTAG...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACCCAATCCCAGCAGCTaGGTCCCTCAAGATCCCATG +
Preference number: 5 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRPNPSS*VPQDPM
Trigger: CATGGGATCTTGAGGGACCAAGCTGCTGGGATTGGG...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp GAAGCCACACCTCTTCCCCGACAACACCCGTCTCCACACTGCGCACCTAGGCCTCCCAATCCCAGCAGCTaGGTCCCTCAAGATCCCATG +
Preference number: 5 (lower is better)
Translates to: EATPLPRQHPSPHCAPRPPNPSS*VPQDPM
Trigger: CATGGGATCTTGAGGGACCAAGCTGCTGGGATTGGG...AGGCCTAGGTGCGCAGTGTGGAGACGGGTGTTGTCGGGGAAGAGGTGTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACAGCAGCACAGGATCCTaGCCCTGGGCTTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDSSTGS*PWACWS
Trigger: GCTCCAGCAAGCCCAGGGCAAGGATCCTGTGCTGCT...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS GCA 90 bp CATCACCAGGCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAGGAACCGGGAGAAGGGCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: HHQAGQAIEKRGHGR*RLLKEQEPGEGPLK
Trigger: TTTCAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCTGGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580898.5
CDS-3UTR CAA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACTAGACTCATGTAGATaGGCTGGCGGGAGCGGAAGT +
Preference number: 5 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRLDSCR*AGGSGS
Trigger: ACTTCCGCTCCCGCCAGCCAATCTACATGAGTCTAG...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp AGCTTGGTCCCTCAAGATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGA +
Preference number: 5 (lower is better)
Translates to: SLVPQDPMGRIAVNLGWPGRCRL*KEQEPG
Trigger: TCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCC...TGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATCTTGAGGGACCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000579146.5
CDS-3UTR CAA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGACCAGAACCATGCATaGAGGGACACCCAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDDQNHA*RDTQAK
Trigger: CTTCGCCTGGGTGTCCCTCAATGCATGGTTCTGGTC...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000619169.4
CDS-3UTR CAA 90 bp GCTGCTGGTAAATGGCAGGGGTCACCTTTACCAGGGCGCAGGCATAGTGTGGCCGACCAGAACCATGCATaGAGGGACACCCAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: AAGKWQGSPLPGRRHSVADQNHA*RDTQAK
Trigger: CTTCGCCTGGGTGTCCCTCAATGCATGGTTCTGGTC...GGCCACACTATGCCTGCGCCCTGGTAAAGGTGACCCCTGCCATTTACCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000619169.4
CDS-3UTR CAA 90 bp CCCAGGCCCATGCTCACGGCCCTGTCACCTATGCACTCAGCCTGGCCCACACTCCAGTCCAGCTTGAACTaGTCCTCTGATTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PRPMLTALSPMHSAWPTLQSSLN*SSDSFS
Trigger: GCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTG...GAGTGTGGGCCAGGCTGAGTGCATAGGTGACAGGGCCGTGAGCATGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp ACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGACAGCAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TQPGPHSRHTVAGSQPDSKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...GCTGTCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp TGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACCCAGCCATAAGCTTTCGCCCAGGTGGCGCCTaGGGCAGAGCTGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: WNSKTLWEGKKPDPAISFRPGGA*GRAGAP
Trigger: TGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCG...AAAGCTTATGGCTGGGTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS CCA 90 bp AGAAGTAGTCCATTTTCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGCAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: RSSPFSRRRPHRCGT*GRRLARRCGSGRAS
Trigger: TGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGAAAATGGACTACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429199.6
CDS-3UTR CAA 90 bp TCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCCCCCAGGGTTCGATTTaGCCCCTGCAGCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: SLVWKTVDQNHALRDTLSPQGSI*PLQPPR
Trigger: CCTGGGTGGCTGCAGGGGCAAAATCGAACCCTGGGG...GGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR CAA 90 bp CCTATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCCAGTCCAGCTTGAACTaGTCCTCTGATTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PMHSAWPTLPTHGGRLSTQSSLN*SSDSFS
Trigger: GCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTG...GGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp CCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTGACCCCAATCCCAGCAGCTaGGTCCCTCAAGATCCCATG +
Preference number: 5 (lower is better)
Translates to: PGGALGRAGAPQVIIDGDPNPSS*VPQDPM
Trigger: CATGGGATCTTGAGGGACCAAGCTGCTGGGATTGGG...GTCACCATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CAA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGACCAGAACCATGCATaGAGGGACACCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQADQNHA*RDTLPW
Trigger: CCATGGCAAGGTGTCCCTCAATGCATGGTTCTGGTC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378011.8
CDS-3UTR CAA 90 bp ATGCACTCAGCCTGGCCCACACTCCCGACACACGGTGGCAGGCTCTCAACCAGAGGTCTTCAGTCCAGCTaGAACTTGTCCTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: MHSAWPTLPTHGGRLSTRGLQSS*NLSSDS
Trigger: GGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACC...TCTGGTTGAGAGCCTGCCACCGTGTGTCGGGAGTGTGGGCCAGGCTGAGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp GCCCTGGGGCCACCCTGGAACAGTAAGACCCTCTGGGAAGGGAAGAAACCAGACAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ALGPPWNSKTLWEGKKPDKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...GTCTGGTTTCTTCCCTTCCCAGAGGGTCTTACTGTTCCAGGGTGGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS TCA 90 bp GGCAGGCAACCCTCAACTGGCCCAGTCCACCTATTCTTGACATGCTaGAGCAACAGGTCCTCAGCTGAGTCCTCAGCTCTGGAGTTTGGC +
Preference number: 5 (lower is better)
Translates to: GRQPSTGPVHLFLTC*SNRSSAESSALEFG
Trigger: GCCAAACTCCAGAGCTGAGGACTCAGCTGAGGACCTGTTGCTTCAGCATGTCAAGAATAGGTGGACTGGGCCAGTTGAGGGTTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580898.5
CDS GCA 90 bp TCCAGAAAGCTGAAAAAGAGGACGTGGACAGGGATGGTGCTGATGTaGCAGATGGCATGGGCATCCAGGACCCAGAAGAGCGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SRKLKKRTWTGMVLM*QMAWASRTQKSGGK
Trigger: CTTCCCACCGCTCTTCTGGGTCCTGGATGCCCATGCCATCTGGCACATCAGCACCATCCCTGTCCACGTCCTCTTTTTCAGCTTTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000619169.4
CDS-3UTR CAA 90 bp GTCCGCCCAGGTGGCGCCTTGGGCAGAGCTGGCGCTCCACAAGTGATTATTGATGGTCTTCAGTCCAGCTaGAACTTGTCCTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: VRPGGALGRAGAPQVIIDGLQSS*NLSSDS
Trigger: GGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACC...ATCAATAATCACTTGTGGAGCGCCAGCTCTGCCCAAGGCGCCACCTGGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CAA 90 bp AGGTTTGCAGGAGGCGGGCAAAGGGGCACCAGACAGGGAACATGCACACAGGCAGGTCTTCAGTCCAGCTaGAACTTGTCCTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: RFAGGGQRGTRQGTCTQAGLQSS*NLSSDS
Trigger: GGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACC...TGCCTGTGTGCATGTTCCCTGTCTGGTGCCCCTTTGCCCGCCTCCTGCAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS-3UTR CAA 90 bp TCGAGTCCCAGATGCTGGGAGGCCTTCCCTAGAACAGACTCCAAGGCTGGTGAGAAATCATCTCAAGGGTaGAGGGGAGAAGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SSPRCWEAFPRTDSKAGEKSSQG*RGEGRP
Trigger: TGGCCTCCCTTCTCCCCTCAACCCTTGAGATGATTT...CTCACCAGCCTTGGAGTCTGTTCTAGGGAAGGCCTCCCAGCATCTGGGACTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGAGCCACCACACCACGTaGACCAGGCCAATAGCCACG +
Preference number: 5 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMSHHTT*TRPIAT
Trigger: CGTGGCTATTGGCCTGGTCAACGTGGTGTGGTGGCT...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300658.9
ENST00000378011.8
CDS-3UTR CAA 90 bp AACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGAGGAGCCACCACACCACGTaGACCAGGCCAATAGCCACG +
Preference number: 5 (lower is better)
Translates to: NCGPEPCIEGHPFLRFGRSHHTT*TRPIAT
Trigger: CGTGGCTATTGGCCTGGTCAACGTGGTGTGGTGGCT...CCTCCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR CAA 90 bp GCCAATAGCCACGTTGGCCACCAGGTTGTAGCCATAGTCGAAGCGGATGAGGCTGACCAGAACCATGCATaGAGGGACACCCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: ANSHVGHQVVAIVEADEADQNHA*RDTLSS
Trigger: TGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTC...AGCCTCATCCGCTTCGACTATGGCTACAACCTGGTGGCCAACGTGGCTATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577337.5
CDS-3UTR CAA 90 bp TCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTGAGGCTGGCCAGGCCATaGAGAAACGAGGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SDLGGSGIIKNASPTARLRLARP*RNEATA
Trigger: GGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCT...CAGTCTGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS-3UTR CAA 90 bp TGCTCCAACCTCTCAACTGTGGACACATTCACCGGCAGTCACTCATCTCACATGCCCAATCCCAGCAGCTaGGTCCCTCAAGATCCCATG +
Preference number: 5 (lower is better)
Translates to: CSNLSTVDTFTGSHSSHMPNPSS*VPQDPM
Trigger: CATGGGATCTTGAGGGACCAAGCTGCTGGGATTGGG...CATGTGAGATGAGTGACTGCCGGTGAATGTGTCCACAGTTGAGAGGTTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
ENST00000619169.4
CDS TCA 90 bp GGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAGGCTGTCATCTTCCAGAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRLAPRSSVQLELVL*FLQQVQAVIFQKAR
Trigger: CCTGGCTTTCTGGAAGATGACAGCCTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS-3UTR CAA 90 bp GATCCCATGGGGAGAATCGCCGTGAACCTTGGCTGGCCAAAGAACAAGCATCCAGGTCTTCAGTCCAGCTaGAACTTGTCCTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: DPMGRIAVNLGWPKNKHPGLQSS*NLSSDS
Trigger: GGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACC...TGGATGCTTGTTCTTTGGCCAGCCAAGGTTCACGGCGATTCTCCCCATGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300658.9
ENST00000378011.8
ENST00000579146.5
CDS-3UTR CAA 90 bp GAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCTCAGATTTGGGCTAGACTCATGTAGATaGGCTGGCGGGAGCGGAAGT +
Preference number: 5 (lower is better)
Translates to: ENCGPEPCIEGHPFLRFGLDSCR*AGGSGS
Trigger: ACTTCCGCTCCCGCCAGCCAATCTACATGAGTCTAG...CCCAAATCTGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584620.5
CDS TCA 90 bp GGCAGACTCGCTCCAAGGTCTTCAGTCCAGCTTGAACTTGTCCTCTaGTTCCTTCAGCAGGTACAGGCTGTCATCTTCCAGAAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: GRLAPRSSVQLELVL*FLQQVQAVIFQKAE
Trigger: TTCAGCTTTCTGGAAGATGACAGCCTGTACCTGCTGAAGGAATCAGAGGACAAGTTCAAGCTGGACTGAAGACCTTGGAGCGAGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000619169.4
CDS GCA 90 bp TCTGCATTTCCTGTGTGTCCTTGGGCAAGTTATTTAGCCTTGCTGTaGCTCAGTTTTCTCATCCAGGCGAAGGCCACACAGGTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: SAFPVCPWASYLALL*LSFLIQAKATQVWY
Trigger: GTACCACACCTGTGTGGCCTTCGCCTGGATGAGAAAACTGAGGCACAGCAAGGCTAAATAACTTGCCCAAGGACACACAGGAAATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS CCA 90 bp TTTAGCTCGTGGAATCTCAAGGCTCAAGGTTCCTCTTCTGCAAAATaGGGAATGATAACACCTGCCTCCTCTGGAGTCTTGGGGACTCAG +
Preference number: 5 (lower is better)
Translates to: FSSWNLKAQGSSSAK*GMITPASSGVLGTQ
Trigger: CTGAGTCCCCAAGACTCCAGAGGAGGCAGGTGTTATCATTCCCCATTTTGCAGAAGAGGAACCTTGAGCCTTGAGATTCCACGAGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584856.1
CDS-3UTR CAA 90 bp TCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCATTGAGGGACACCCTTTCCACCCTTTCCTCAGATTaGGGAGGTAGTGGTATCATT +
Preference number: 5 (lower is better)
Translates to: SLVWKTVDQNHALRDTLSTLSSD*GGSGII
Trigger: AATGATACCACTACCTCCCAAATCTGAGGAAAGGGT...GGAAAGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CAA 90 bp TTTCTCTGTGAGGTCAGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATGCGCAAGTTATTTAGCCTaGCTGTGCCTCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FLCEVSVPGVENCGPEPCASYLA*LCLSFL
Trigger: GAGAAAACTGAGGCACAGCAAGGCTAAATAACTTGC...GCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACTGACCTCACAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CAA 90 bp TCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTGGACCAGAACCATGCATaGAGGGACACCCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SDLGGSGIIKNASPTARLDQNHA*RDTLSS
Trigger: TGAGGAAAGGGTGTCCCTCAATGCATGGTTCTGGTC...CAGTCTGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CAA 90 bp GGGACACCCTTTCCTCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCGCAAGTTATTTAGCCTaGCTGTGCCTCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GTPFPQIWEVVVSLRMQAASYLA*LCLSFL
Trigger: GAGAAAACTGAGGCACAGCAAGGCTAAATAACTTGC...GGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGAGGAAAGGGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS-3UTR CAA 90 bp TCAGATTTGGGAGGTAGTGGTATCATTAAGAATGCAAGCCCTACAGCCAGACTGACCCTTTCCTCAGATTaGGGAGGTAGTGGTATCATT +
Preference number: 5 (lower is better)
Translates to: SDLGGSGIIKNASPTARLTLSSD*GGSGII
Trigger: AATGATACCACTACCTCCCAAATCTGAGGAAAGGGT...CAGTCTGGCTGTAGGGCTTGCATTCTTAATGATACCACTACCTCCCAAATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS CCA 72 bp AGTACGCAGTCGCGGTACACCGGCTCACGGTCGCCCTaGGAGCCGCTCGCCAGCGCCGCTGCCCCAGCTAGC +
Preference number: 6 (lower is better)
Translates to: STQSRYTGSRSP*EPLASAAAPAS
Trigger: GCTAGCTGGGGCAGCGGCGCTGGCGAGCGGCTCCCAGGGCGACCGTGAGCCGGTGTACCGCGACTGCGTACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000579146.5
ENST00000582276.1
ENST00000584620.5
CDS CCA 72 bp GGGACACCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: GTPRRRPHRCGT*GRRLARRCGSG
Trigger: GCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGGTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000580898.5
ENST00000582276.1
CDS GCA 72 bp GGTGGGAAGTCAAGCAGCTCGAGCAGGGACAGCCCCTaGAGCAGCAAGACCACCACCACGCACTTGCGCACG +
Preference number: 6 (lower is better)
Translates to: GGKSSSSSRDSP*SSKTTTTHLRT
Trigger: CGTGCGCAAGTGCGTGGTGGTGGTCTTGCTGCTGCAGGGGCTGTCCCTGCTCGAGCTGCTTGACTTCCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000619169.4
CDS CCA 72 bp CAGAAAGCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: QKARRRPHRCGT*GRRLARRCGSG
Trigger: GCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGCTTTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579146.5
CDS TCA 72 bp GGTAGCGGCAGAGCATCACCAGGCTGGCCAGGCCATTaGGAAACGAGGCCACGGCCGATGCCGGCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: GSGRASPGWPGH*ETRPRPMPALE
Trigger: TTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGCCTGGTGATGCTCTGCCGCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000580898.5
ENST00000582276.1
ENST00000584620.5
ENST00000584856.1
CDS GCA 72 bp TTCAGAGCGCCCCCAGAGCAGTTCTGCTCTTCGCACTaGAGTACGCAGTCGCGGTACACCGGCTCACGGTCG +
Preference number: 6 (lower is better)
Translates to: FRAPPEQFCSSH*STQSRYTGSRS
Trigger: CGACCGTGAGCCGGTGTACCGCGACTGCGTACTGCAGTGCGAAGAGCAGAACTGCTCTGGGGGCGCTCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000579146.5
ENST00000582276.1
ENST00000584620.5
CDS CCA 72 bp GAAGGCCACACAGGTGTGGTACATGGGGGAGGAGGCTaGCACGAAGGTGCGGTAGCGGCAGAGCATCACCAG +
Preference number: 6 (lower is better)
Translates to: EGHTGVVHGGGG*HEGAVAAEHHQ
Trigger: CTGGTGATGCTCTGCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000577337.5
ENST00000579146.5
ENST00000580898.5
ENST00000582276.1
ENST00000584620.5
ENST00000584856.1
CDS CCA 72 bp CCAGATGGCATGGGCATCCAGGACCCAGAAGAGCGGTaGGAAGTCAAGCAGCTCGAGCAGGGACAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PDGMGIQDPEER*EVKQLEQGQPL
Trigger: CAGGGGCTGTCCCTGCTCGAGCTGCTTGACTTCCCACCGCTCTTCTGGGTCCTGGATGCCCATGCCATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000619169.4
CDS CCA 72 bp CCATTTTCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: PFSRRRPHRCGT*GRRLARRCGSG
Trigger: GCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGAAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429199.6
CDS CCA 72 bp TTCTCATCCAGGCGAAGGCCACACAGGTGTGGTACATaGGGGAGGAGGCTGGCACGAAGGTGCGGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: FSSRRRPHRCGT*GRRLARRCGSG
Trigger: GCCGCTACCGCACCTTCGTGCCAGCCTCCTCCCCCATGTACCACACCTGTGTGGCCTTCGCCTGGATGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS GCA 72 bp GCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATaGCGGCTCTTGAAAGAACAGGAACCGGGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: AGQAIEKRGHGR*RLLKEQEPGEG
Trigger: CCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000580898.5
ENST00000582276.1
ENST00000584620.5
ENST00000584856.1
CDS CAA 72 bp CGTCCCGACAGGTCCAGCCTGCTAGACTCATGTAGATaGGCTGGCGGGAGCGGAAGTGATTCAGAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: RPDRSSLLDSCR*AGGSGSDSERP
Trigger: GGGGCGCTCTGAATCACTTCCGCTCCCGCCAGCCAATCTACATGAGTCTAGCAGGCTGGACCTGTCGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000579146.5
ENST00000584620.5
CDS CAA 90 bp GCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGAGAAGGGCCACTTGCCATGGAACTG +
Preference number: 6 (lower is better)
Translates to: AGQAIEKRGHGRCRL*KEQEPGEGPLAMEL
Trigger: CAGTTCCATGGCAAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000584620.5
ENST00000584856.1
CDS CAA 72 bp GCCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGAGAAGGGCCACTTGCC +
Preference number: 6 (lower is better)
Translates to: AIEKRGHGRCRL*KEQEPGEGPLA
Trigger: GGCAAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000584620.5
ENST00000584856.1
CDS CAA 72 bp GAACCGGGAGAAGGGCCACTGCTAGACTCATGTAGATaGGCTGGCGGGAGCGGAAGTGATTCAGAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: EPGEGPLLDSCR*AGGSGSDSERP
Trigger: GGGGCGCTCTGAATCACTTCCGCTCCCGCCAGCCAATCTACATGAGTCTAGCAGTGGCCCTTCTCCCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582276.1
CDS CAA 90 bp GCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGAGAAGGGCCACTGCTAGACTCATGT +
Preference number: 6 (lower is better)
Translates to: AGQAIEKRGHGRCRL*KEQEPGEGPLLDSC
Trigger: ACATGAGTCTAGCAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582276.1
CDS CAA 90 bp GCTGGCCAGGCCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGAGAAGGGCCACTGAAAAAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: AGQAIEKRGHGRCRL*KEQEPGEGPLKKEQ
Trigger: CTGCTCCTTTTTCAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGCCTGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580898.5
CDS TCA 72 bp CCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTTaGAAGAACAGGAACCGGGAGAAGGGCCACTTGCCA +
Preference number: 6 (lower is better)
Translates to: PLRNEATADAGS*KNRNREKGHLP
Trigger: TGGCAAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000429199.6
ENST00000579146.5
ENST00000584620.5
ENST00000584856.1
CDS CCA 72 bp AGTCACTACCCCTCTCCCCACCAAACAGGCCACAGCTaGGCAGCAAGTGCTACAGCTCCTTGTCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: SHYPSPHQTGHS*AASATAPCQEP
Trigger: TGGCTCCTGACAAGGAGCTGTAGCACTTGCTGCCCAGCTGTGGCCTGTTTGGTGGGGAGAGGGGTAGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309862.10
CDS CAA 72 bp GCCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGAGAAGGGCCACTGCTA +
Preference number: 6 (lower is better)
Translates to: AIEKRGHGRCRL*KEQEPGEGPLL
Trigger: TAGCAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582276.1
CDS CAA 72 bp GCCATTGAGAAACGAGGCCACGGCCGATGCCGGCTCTaGAAAGAACAGGAACCGGGAGAAGGGCCACTGAAA +
Preference number: 6 (lower is better)
Translates to: AIEKRGHGRCRL*KEQEPGEGPLK
Trigger: TTTCAGTGGCCCTTCTCCCGGTTCCTGTTCTTTCAAGAGCCGGCATCGGCCGTGGCCTCGTTTCTCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580898.5
CDS GCA 72 bp AGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATaGATTGAGGGACACCCAGGCGAAGGCCACACAGGT +
Preference number: 6 (lower is better)
Translates to: SVPGVENCGPEP*IEGHPGEGHTG
Trigger: ACCTGTGTGGCCTTCGCCTGGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000580898.5
ENST00000582276.1
CDS GCA 72 bp CTGAAAAAGAGGACGTGGACAGGGATGGTGCTGATGTaGCAGATGGCATGGGCATCCAGGACCCAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LKKRTWTGMVLM*QMAWASRTQKS
Trigger: GCTCTTCTGGGTCCTGGATGCCCATGCCATCTGGCACATCAGCACCATCCCTGTCCACGTCCTCTTTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000619169.4
CDS TCA 72 bp TTGGTACCCTTGACTGGGGCTCTTGAGGGTAATGGGTaGAGCCAAATCTGCCATGGCTCAGTTCCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LVPLTGALEGNG*SQICHGSVPSS
Trigger: TGAGCTGGGAACTGAGCCATGGCAGATTTGGCTTCACCCATTACCCTCAAGAGCCCCAGTCAAGGGTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584856.1
CDS GCA 72 bp AGTGTCCCTGGTGTGGAAAACTGTGGACCAGAACCATaGATTGAGGGACACCTTGCCATGGAACTGAGGCAC +
Preference number: 6 (lower is better)
Translates to: SVPGVENCGPEP*IEGHLAMELRH
Trigger: GTGCCTCAGTTCCATGGCAAGGTGTCCCTCAATGCATGGTTCTGGTCCACAGTTTTCCACACCAGGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378011.8
CDS CAA 90 bp CCTGGCTCTGCATTTCCTGTGTGTCCTTGGGCAAGTTATTTAGCCTaGCTGTGCCTCAGTTTTCTCATCCAGGCGAAGGCCACACAGGTG +
Preference number: 6 (lower is better)
Translates to: PGSAFPVCPWASYLA*LCLSFLIQAKATQV
Trigger: CACCTGTGTGGCCTTCGCCTGGATGAGAAAACTGAGGCACAGCAAGGCTAAATAACTTGCCCAAGGACACACAGGAAATGCAGAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577337.5
ENST00000584620.5
CDS CCA 72 bp AGGCTGTCATCTTCCAGAAAGCTGAAAAAGAGGACGTaGACAGGGATGGTGCTGATGTGCCAGATGGCATGG +
Preference number: 6 (lower is better)
Translates to: RLSSSRKLKKRT*TGMVLMCQMAW
Trigger: CCATGCCATCTGGCACATCAGCACCATCCCTGTCCACGTCCTCTTTTTCAGCTTTCTGGAAGATGACAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300658.9
ENST00000309862.10
ENST00000378011.8
ENST00000429199.6
ENST00000619169.4
CDS TCA 72 bp CAAATCTGCCATGGCTCAGTTCCCAGCTCAGCTCTGTaGCCTTGGGAAAGTTCCTTTAGCTCGTGGAATCTC +
Preference number: 6 (lower is better)
Translates to: QICHGSVPSSAL*PWESSFSSWNL
Trigger: GAGATTCCACGAGCTAAAGGAACTTTCCCAAGGTCACAGAGCTGAGCTGGGAACTGAGCCATGGCAGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584856.1