RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197121

Ensembl transcript IDs: ENST00000354764.9, ENST00000374738.3, ENST00000409188.5, ENST00000409475.5, ENST00000422444.1, ENST00000423035.5, ENST00000470179.5, ENST00000476250.5, ENST00000482051.5, ENST00000485830.1

Found 508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTCTTAGGCACTGCTGAACTCACAACAGATAAGGCACTGGTATaGTGGCTTAATTTTGGTAGAAAAGTCAATCCTGAACGAACTTGG +
Preference number: 1 (lower is better)
Translates to: QVLGTAELTTDKALV*WLNFGRKVNPERTW
Trigger: CCAAGTTCGTTCAGGATTGACTTTTCTACCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGAGTTCAGCAGTGCCTAAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 90 bp TGTAAAAATAGACTTGTCTTCTCCAAAGGATCTTGCTGTCCATACTaGTGGATCTGTGTGTTCCCTCTTATCACTGGCCCTAAACACATA +
Preference number: 1 (lower is better)
Translates to: CKNRLVFSKGSCCPY*WICVFPLITGPKHI
Trigger: TATGTGTTTAGGGCCAGTGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAGACAAGTCTATTTTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR CCA 90 bp ACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTaGAATACCCGTCAAAGGGAGAATTTTGTGTTCTTCAGCATAGGA +
Preference number: 1 (lower is better)
Translates to: TNLLITSSITRKKEN*NTRQRENFVFFSIG
Trigger: TCCTATGCTGAAGAACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR GCA 90 bp GAAGTCAAAGTGGTACTTGAAGTCAATGTCCTCTGCTTTTCTAAGTaGAATGGAGCCAATAGAACGAACTTGCTTATAACTTCCAGCATT +
Preference number: 1 (lower is better)
Translates to: EVKVVLEVNVLCFSK*NGANRTNLLITSSI
Trigger: AATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAGGACATTGACTTCAAGTACCACTTTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR GCA 90 bp ATGCTGAGTAATACAATCCATGTTAGTAAGTTAATCACAGTACTGTaGATGCGAAGGCTATCTTCAGCATCGTTGGCAGATAAACGAAGA +
Preference number: 1 (lower is better)
Translates to: MLSNTIHVSKLITVL*MRRLSSASLADKRR
Trigger: TCTTCGTTTATCTGCCAACGATGCTGAAGATAGCCTTCGCATGCACAGTACTGTGATTAACTTACTAACATGGATTGTATTACTCAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CCA 90 bp AAAGCCACCAGTTCTTCATTGAAGTTCACACTAAAGAAGTCAAAGTaGTACTTGAAGTCAATGTCCTCTGCTTTTCTAAGTGCAATGGAG +
Preference number: 1 (lower is better)
Translates to: KATSSSLKFTLKKSK*YLKSMSSAFLSAME
Trigger: CTCCATTGCACTTAGAAAAGCAGAGGACATTGACTTCAAGTACCACTTTGACTTCTTTAGTGTGAACTTCAATGAAGAACTGGTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 90 bp GACGTGTACATTTTAAATAATGCCACATGGGTATTGTTTTCTGGTTaGGCAATATGGAGTTTCAGAGAAATTTCTGTGGAAGATGGAGCC +
Preference number: 1 (lower is better)
Translates to: DVYILNNATWVLFSG*AIWSFREISVEDGA
Trigger: GGCTCCATCTTCCACAGAAATTTCTCTGAAACTCCATATTGCTCAACCAGAAAACAATACCCATGTGGCATTATTTAAAATGTACACGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CCA 90 bp CTGAACGAACTTGGTAATCCCGGAATCCTCCAGCTACAGAAAGTGTaGTTAAATTTATGTGTCGAGCATTTAGAATCCAATAGTTGTTTA +
Preference number: 1 (lower is better)
Translates to: LNELGNPGILQLQKV*LNLCVEHLESNSCL
Trigger: TAAACAACTATTGGATTCTAAATGCTCGACACATAAATTTAACCACACTTTCTGTAGCTGGAGGATTCCGGGATTACCAAGTTCGTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 90 bp CCAACTAACTATGATCAAGACAATTGTCAAAAAGGGCAAGTCTGGTaGTATCATCTTGATATCTTTAGGAAGTTCAGAGGGTCTTTTCAA +
Preference number: 1 (lower is better)
Translates to: PTNYDQDNCQKGQVW*YHLDIFRKFRGSFQ
Trigger: TTGAAAAGACCCTCTGAACTTCCTAAAGATATCAAGATGATATCACCAGACTTGCCCTTTTTGACAATTGTCTTGATCATAGTTAGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR GCA 90 bp AAGAAGATTTATCAGATCATGCTTAAAATTTTTCAGTGTAAGCAATaGTCTTGCAACAAGGCCACCCATAGAATGACCAATTATTGCCAC +
Preference number: 1 (lower is better)
Translates to: KKIYQIMLKIFQCKQ*SCNKATHRMTNYCH
Trigger: GTGGCAATAATTGGTCATTCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAAAATTTTAAGCATGATCTGATAAATCTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR GCA 90 bp TCATATCAGACTTCTCGTACAGTTGATAAAACAGACTATTTTATATaGACAGGAGTCCTCAATGATAGTGATCACCATATATCCCTTCAT +
Preference number: 1 (lower is better)
Translates to: SYQTSRTVDKTDYFI*TGVLNDSDHHISLH
Trigger: ATGAAGGGATATATGGTGATCACTATCATTGAGGACTCCTGTGCATATAAAATAGTCTGTTTTATCAACTGTACGAGAAGTCTGATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR GCA 90 bp ATTTATCAGATCATGCTTAAAATTTTTCAGTGTAAGCAATGCTCTTaGAACAAGGCCACCCATAGAATGACCAATTATTGCCACACTTTT +
Preference number: 1 (lower is better)
Translates to: IYQIMLKIFQCKQCS*NKATHRMTNYCHTF
Trigger: AAAAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAAAATTTTAAGCATGATCTGATAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp GGAATGAAGACAAAGCATGGAAGCCTATATAAATGTGCTGACCCAAAAGCAATCGGCAGGGGCATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GMKTKHGSLYKCADPKAIGRGIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCC...GATTGCTTTTGGGTCAGCACATTTATATAGGCTTCCATGCTTTGTCTTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGAAACAAGCACCTGTCTaGCATATCCCCACCACGAGT +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLKQAPV*HIPTTS
Trigger: ACTCGTGGTGGGGATATGGCAGACAGGTGCTTGTTT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGGCAGGGGCATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTGRGIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGGAAGAGCTCCACCATaGAATCTAACTACCTGTCCA +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLGRAPP*NLTTCP
Trigger: TGGACAGGTAGTTAGATTTCATGGTGGAGCTCTTCC...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCTGGGAGGTGGAGGTTaGAGTGAGCTGAAATCGCGC +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALGGGG*SELKSR
Trigger: GCGCGATTTCAGCTCACTGCAACCTCCACCTCCCAG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAA +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLDLRHF*QPWCNE
Trigger: TTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTC...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGCTCGAGGACATCCCTaGGTACTAACAAGGATACAT +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLARGHP*VLTRIH
Trigger: ATGTATCCTTGTTAGTACCCAGGGATGTCCTCGAGC...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAAAAATTAGCCAGGTGTaGTGGCGGGTGTCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSKISQV*WRVSVV
Trigger: GACTACAGACACCCGCCACCACACCTGGCTAATTTT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGAAAATAGCCAGGACCTaGGGAAGAACTGAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLKIART*GRTEKR
Trigger: TCTCTTCTCAGTTCTTCCTCAGGTCCTGGCTATTTT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAACCTGTAGTCTCACCTaGTGTGGGAGGCTGAGATGG +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTTCSLT*CGRLRW
Trigger: CCATCTCAGCCTCCCACAGCAGGTGAGACTACAGGT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAA +
Preference number: 2 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVDLRHF*QPWCNE
Trigger: TTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTC...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GTTTCAGAGAAATTTCTGTGGAAGATGGAGCCTGTGCAATGGTTAGTGAATCTTCACACAATGGAGAGGTaGTCTGTTGAGACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: VSEKFLWKMEPVQWLVNLHTMER*SVETQV
Trigger: GACCTGGGTCTCAACAGACCACCTCTCCATTGTGTG...AAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CAA 90 bp AAAGGCAAAGAACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTaGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: KGKELSFSQVTETSI*LIFKEPTFASLVAS
Trigger: GCTGGCTACCAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGTTCTTTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTATACTCTTCTGCCTTaGCGATTACCTTCTTCCTAC +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLYTLLP*RLPSSY
Trigger: GTAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAACTGGGAGGTGGAGGTTaGAGTGAGCTGAAATCGCGC +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALELGGGG*SELKSR
Trigger: GCGCGATTTCAGCTCACTGCAACCTCCACCTCCCAG...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCACAGGCAGTAACAGCTaGGAGGCTGTAATGGAATCC +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRATGSNS*EAVMES
Trigger: GGATTCCATTACAGCCTCTCAGCTGTTACTGCCTGT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAAAACAAGCACCTGTCTaGCATATCCCCACCACGAGT +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTKQAPV*HIPTTS
Trigger: ACTCGTGGTGGGGATATGGCAGACAGGTGCTTGTTT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGAAGTCAATGTCCTCTaGTTTTCTAAGTGCAATGGA +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLEVNVL*FSKCNG
Trigger: TCCATTGCACTTAGAAAAGCAGAGGACATTGACTTC...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CAA 90 bp CTGCTGAACTCACAACAGATAAGGCACTGGTATGATGGCTTAATTTaGGTAGAAAAGTCAATCCTGAACGAACTTGGTAATCCCGGAATC +
Preference number: 2 (lower is better)
Translates to: LLNSQQIRHWYDGLI*VEKSILNELGNPGI
Trigger: GATTCCGGGATTACCAAGTTCGTTCAGGATTGACTTTTCTACCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGAGTTCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR TCA 90 bp GTTTCAGAGAAATTTCTGTGGAAGATGGAGCCTGTGCAATGGTTAGTGAATCTTTTCTTCTTTGACTGCTaGGCACTTGCTTACCACGTT +
Preference number: 2 (lower is better)
Translates to: VSEKFLWKMEPVQWLVNLFFFDC*ALAYHV
Trigger: AACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAA...AAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGCACAAAACAAAACCATaGTTCAACTACTTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLHKTKP*FNYFPQ
Trigger: TTGAGGGAAGTAGTTGAAGCATGGTTTTGTTTTGTG...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAACTAAACAACTGAACTaGTCCAATACCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSTKQLN*SNTRKQ
Trigger: TTGCTTCCTGGTATTGGAGCAGTTCAGTTGTTTAGT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTTTTGGCAACCATGGTaGAATGAATTGAATCCAATG +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLFWQPW*NELNPM
Trigger: CATTGGATTCAATTCATTGCACCATGGTTGCCAAAA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAAAGAGTATACTCTTCTaGCTTGCCGATTACCTTCTT +
Preference number: 2 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSKSILF*LADYLL
Trigger: AAGAAGGTAATCGGCAAGGCAGAAGAGTATACTCTT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTTGCGGGATAGCGTTTTaGCAGTTTCTTTGGAAGTTC +
Preference number: 2 (lower is better)
Translates to: LFKASHNEERSLTDAEDSCGIAF*QFLWKF
Trigger: GAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCA...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTAAGATACAACTCATATaGGGGATAGCGTTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCKIQLI*GIAFCQ
Trigger: CTGGCAAAACGCTATCCCGCATATGAGTTGTATCTT...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTTTTCAGTGTAAGCAATaGTCTTGCAACAAGGCCACC +
Preference number: 2 (lower is better)
Translates to: LFKASHNEERSLTDAEDSFQCKQ*SCNKAT
Trigger: GGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAA...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCACTTTTGGCAACCATaGTGCAATGAATTGAATCCA +
Preference number: 2 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVHFWQP*CNELNP
Trigger: TGGATTCAATTCATTGCACCATGGTTGCCAAAAGTG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGCTCGAGGACATCCCTaGGTACTAACAAGGATACAT +
Preference number: 2 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGARGHP*VLTRIH
Trigger: ATGTATCCTTGTTAGTACCCAGGGATGTCCTCGAGC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CCA 90 bp GTTTCAGAGAAATTTCTGTGGAAGATGGAGCCTGTGCAATGGTTAGTGAATCTTGTTTACACCACACAATaGAGAGGTGGTCTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: VSEKFLWKMEPVQWLVNLVYTTQ*RGGLLR
Trigger: TCTCAACAGACCACCTCTCCATTGTGTGGTGTAAAC...AAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCTACATAGGTCCATTTaGACACTTTTACTAGAACCC +
Preference number: 2 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVLHRSI*TLLLEP
Trigger: GGGTTCTAGTAAAAGTGTCCAAATGGACCTATGTAG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGACTTCCACGAACAGATaGTACATAAACAACAAGATG +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLTSTNR*YINNKM
Trigger: CATCTTGTTGTTTATGTACCATCTGTTCGTGGAAGT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTGGGTATGTCTCAGCCTaGGTTTACGCTATCCTAAGG +
Preference number: 2 (lower is better)
Translates to: TGDHACLNGKISKVTIIFGYVSA*VYAILR
Trigger: CCTTAGGATAGCGTAAACTCAGGCTGAGACATACCC...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGGGTATGTCTCAGCCTaGGTTTACGCTATCCTAAGG +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALEGYVSA*VYAILR
Trigger: CCTTAGGATAGCGTAAACTCAGGCTGAGACATACCC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAACAGGCAGTAACAGCTaGGAGGCTGTAATGGAATCC +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALETGSNS*EAVMES
Trigger: GGATTCCATTACAGCCTCTCAGCTGTTACTGCCTGT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAACAGGCAGTAACAGCTaGGAGGCTGTAATGGAATCC +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKTGSNS*EAVMES
Trigger: GGATTCCATTACAGCCTCTCAGCTGTTACTGCCTGT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAAAAATAGCCAGGACCTaGGGAAGAACTGAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGKIART*GRTEKR
Trigger: TCTCTTCTCAGTTCTTCCTCAGGTCCTGGCTATTTT...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGATGGGAGGATCACATaGGCCAAAGAGTTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKDGRIT*AKEFKA
Trigger: AGCCTTGAACTCTTTGGCTCATGTGATCCTCCCATC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGCTTGGGCAACAAACTaGAACCTCGTCTCTACAAAA +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTAWATN*NLVSTK
Trigger: TTTTGTAGAGACGAGGTTTCAGTTTGTTGCCCAAGC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAAGGCCACCCATAGAATaGCCAATTATTGCCACACTT +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTRPPIE*PIIATL
Trigger: AAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCACTGTCCAAGTATTTGTaGAAAGGAAGTCTTAACTGT +
Preference number: 2 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSLSKYL*KGSLNC
Trigger: ACAGTTAAGACTTCCTTTTCACAAATACTTGGACAG...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATTATCTCCACAATCCTaGCTCTGCTGTCCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRLSPQS*LCCPPS
Trigger: GGAAGGAGGACAGCAGAGGCAGGATTGTGGAGATAA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTATTCACAAGTGCAATaGTGGAATCACTGGAAATTT +
Preference number: 2 (lower is better)
Translates to: VTETSILLIFKEPTFASLYSQVQ*WNHWKF
Trigger: AAATTTCCAGTGATTCCACCATTGCACTTGTGAATA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATCTTGCTGTCCATACTaGTGGATCTGTGTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALESCCPY*WICVFP
Trigger: AGGGAACACACAGATCCATCAGTATGGACAGCAAGA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATCTTGCTGTCCATACTaGTGGATCTGTGTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKSCCPY*WICVFP
Trigger: AGGGAACACACAGATCCATCAGTATGGACAGCAAGA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAGTCAAAGTGGTACTTaGAGTCAATGTCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRASQSGT*SQCPLL
Trigger: AAGCAGAGGACATTGACTTCAAGTACCACTTTGACT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAACAGACTATTTTATATaGACAGGAGTCCTCAATGAT +
Preference number: 2 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSTDYFI*TGVLND
Trigger: ATCATTGAGGACTCCTGTGCATATAAAATAGTCTGT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCACCATCAATCTTGCATTaGTTACCAAGAAAACATATC +
Preference number: 2 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSPSILH*LPRKHI
Trigger: GATATGTTTTCTTGGTAACCAATGCAAGATTGATGG...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAA +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKDLRHF*QPWCNE
Trigger: TTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCACTGCTTTCTTATCCTaGCAAATGTCATGCACTCCA +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRATAFLS*QMSCTP
Trigger: TGGAGTGCATGACATTTGCCAGGATAAGAAAGCAGT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAACTGCTTTCTTATCCTaGCAAATGTCATGCACTCCA +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTTAFLS*QMSCTP
Trigger: TGGAGTGCATGACATTTGCCAGGATAAGAAAGCAGT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTCAGATACTTAATTGTTaGCAGCAGTTCAGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: LFKASHNEERSLTDAEDSQILNC*QQFSFP
Trigger: TGGAAAGCTGAACTGCTGCCAACAATTAAGTATCTG...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp GGAATGAAGACAAAGCATGGAAGCCTATATAAATGTGCTGACCCAAAAGCAATCGATAAGAAAGAAGTATaGCTAGTGCTCCACAAGTTG +
Preference number: 2 (lower is better)
Translates to: GMKTKHGSLYKCADPKAIDKKEV*LVLHKL
Trigger: CAACTTGTGGAGCACTAGCCATACTTCTTTCTTATC...GATTGCTTTTGGGTCAGCACATTTATATAGGCTTCCATGCTTTGTCTTCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp GGAATGAAGACAAAGCATGGAAGCCTATATAAATGTGCTGACCCAAAAGCAATCTATCTTCAGCATCGTTaGCAGATAAACGAAGATGGT +
Preference number: 2 (lower is better)
Translates to: GMKTKHGSLYKCADPKAIYLQHR*QINEDG
Trigger: ACCATCTTCGTTTATCTGCCAACGATGCTGAAGATA...GATTGCTTTTGGGTCAGCACATTTATATAGGCTTCCATGCTTTGTCTTCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CAA 90 bp GATCAGAGAGGCACTGTTTCATCAATACCCTGTAATGATTTGCGTTaGAATCTAGGATACTCACAGATCATGGACCATATACACCTATTT +
Preference number: 2 (lower is better)
Translates to: DQRGTVSSIPCNDLR*NLGYSQIMDHIHLF
Trigger: AAATAGGTGTATATGGTCCATGATCTGTGAGTATCCTAGATTCAAACGCAAATCATTACAGGGTATTGATGAAACAGTGCCTCTCTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409475.5
3UTR CAA 90 bp AAAAGTGATCAGAGAGGCACTGTTTCATCAATACCCTGTAATGATTaGCGTTTGAATCTAGGATACTCACAGATCATGGACCATATACAC +
Preference number: 2 (lower is better)
Translates to: KSDQRGTVSSIPCND*RLNLGYSQIMDHIH
Trigger: GTGTATATGGTCCATGATCTGTGAGTATCCTAGATTCAAACGCAAATCATTACAGGGTATTGATGAAACAGTGCCTCTCTGATCACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409475.5
3UTR CAA 90 bp ATGATCAAGACAATTGTCAAAAAGGGCAAGTCTGGTGATATCATCTaGATATCTTTAGGAAGTTCAGAGGGTCTTTTCAAAGCTAGCCAC +
Preference number: 2 (lower is better)
Translates to: MIKTIVKKGKSGDII*ISLGSSEGLFKASH
Trigger: GTGGCTAGCTTTGAAAAGACCCTCTGAACTTCCTAAAGATATCAAGATGATATCACCAGACTTGCCCTTTTTGACAATTGTCTTGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGCAACCATGGTGCAATaGATTGAATCCAATGGTATA +
Preference number: 2 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGATMVQ*IESNGI
Trigger: TATACCATTGGATTCAATTCATTGCACCATGGTTGC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACATGCATCAAGACTCAATaGAGACCCTGTCAAAATGTA +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTCIKTQ*RPCQNV
Trigger: TACATTTTGACAGGGTCTTCATTGAGTCTTGATGCA...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTGTATTGTTTTCTGGTTaGGCAATATGGAGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: LFKASHNEERSLTDAEDSVLFSG*AIWSFR
Trigger: TCTGAAACTCCATATTGCTCAACCAGAAAACAATAC...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTCCACCCATCAATCTTaGATTGGTTACCAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHSTHQS*IGYQEN
Trigger: GTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACCACTTTTGGCAACCATaGTGCAATGAATTGAATCCA +
Preference number: 2 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHHFWQP*CNELNP
Trigger: TGGATTCAATTCATTGCACCATGGTTGCCAAAAGTG...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAACCTTTTATTTCCCTTaGCCACAAAGGGTGCTAATA +
Preference number: 2 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGTFYFP*PQRVLI
Trigger: TATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGT...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAATGGAGCCTGTGCAATaGTTAGTGAATCTTCATAAG +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTMEPVQ*LVNLHK
Trigger: CTTATGAAGATTCACTAACCATTGCACAGGCTCCAT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CAA 90 bp ATACTGGTTATTTCTTCTTTGACTGCTGAGCACTTGCTTACCACGTaGATTTTAAAAGCTTGGTATATCTGTCCAAAGTTCAGAAGCTCT +
Preference number: 2 (lower is better)
Translates to: ILVISSLTAEHLLTT*ILKAWYICPKFRSS
Trigger: AGAGCTTCTGAACTTTGGACAGATATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAAATAACCAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGATATAAACTAAACAACTaGACTGCTCCAATACCAGGA +
Preference number: 2 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGYKLNN*TAPIPG
Trigger: TCCTGGTATTGGAGCAGTTCAGTTGTTTAGTTTATA...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACATATAAACTAAACAACTaGACTGCTCCAATACCAGGA +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTYKLNN*TAPIPG
Trigger: TCCTGGTATTGGAGCAGTTCAGTTGTTTAGTTTATA...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCATGAGTAGTATCACATaGATGACAAGACAACCAACA +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAMSSIT*MTRQPT
Trigger: TGTTGGTTGTCTTGTCATTCATGTGATACTACTCAT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACATATCATGTAGGCTTTTaGACAGTTAATAGCTCTACG +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTYHVGF*TVNSST
Trigger: CGTAGAGCTATTAACTGTTCAAAAGCCTACATGATA...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGTAAAAAGTCCAATATaGAACAGAACGAGTGCAACA +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTVKSPI*NRTSAT
Trigger: TGTTGCACTCGTTCTGTTTCATATTGGACTTTTTAC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR TCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGAACTTGGTCTGCTTCTaGAGACTTCCACCATACAAA +
Preference number: 2 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMNLVCF*RLPPYK
Trigger: TTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATATACTCTTCTGCCTTaGCGATTACCTTCTTCCTAC +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALEYTLLP*RLPSSY
Trigger: GTAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCATACATATTCACAAGTaGAATGGTGGAATCACTGGA +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAIHIHK*NGGITG
Trigger: TCCAGTGATTCCACCATTGCACTTGTGAATATGTAT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGCTCTGCTTTTCTAAGTaGAATGGAGCCAATAGAACG +
Preference number: 2 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMLCFSK*NGANRT
Trigger: CGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAG...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGCCACTTTGTTCATGGTaGCTGCCAAAAACTAACCAA +
Preference number: 2 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMPLCSW*LPKTNQ
Trigger: TTGGTTAGTTTTTGGCAGCCACCATGAACAAAGTGG...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAACCACTTTGTTCATGGTaGCTGCCAAAAACTAACCAA +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALEPLCSW*LPKTNQ
Trigger: TTGGTTAGTTTTTGGCAGCCACCATGAACAAAGTGG...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGATCCACTTTGTTCATaGTGGCTGCCAAAAACTAAC +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALEDPLCS*WLPKTN
Trigger: GTTAGTTTTTGGCAGCCACCATGAACAAAGTGGATC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGATCCACTTTGTTCATaGTGGCTGCCAAAAACTAAC +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKDPLCS*WLPKTN
Trigger: GTTAGTTTTTGGCAGCCACCATGAACAAAGTGGATC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACATTAGTTGAGAGGATTTaGGCATTTACAGTCTACACA +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTLVERI*AFTVYT
Trigger: TGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAA...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATTTTCCACTGCACAGTaGAGGAAGGGAAGGTTATTT +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKFSTAQ*RKGRLF
Trigger: AAATAACCTTCCCTTCCTCCACTGTGCAGTGGAAAA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCATTCATGTACAAACTTaGTCTGCTTCTGAAGACTTC +
Preference number: 2 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAIHVQT*SASEDF
Trigger: GAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAAT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CAA 90 bp TCATTGGCACAAATATCCAGAGGTATTTTACAGTTTCATTTACCTTaGGTGGCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACAT +
Preference number: 2 (lower is better)
Translates to: SLAQISRGILQFHLP*VAKSILLTVWIQSH
Trigger: ATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGCCACCAAAGGTAAATGAAACTGTAAAATACCTCTGGATATTTGTGCCAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTCCACCCATCAATCTTaGATTGGTTACCAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMSTHQS*IGYQEN
Trigger: GTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATCCACCCATCAATCTTaGATTGGTTACCAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRSTHQS*IGYQEN
Trigger: GTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAACTAAACAACTGAACTaGTCCAATACCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRTKQLN*SNTRKQ
Trigger: TTGCTTCCTGGTATTGGAGCAGTTCAGTTGTTTAGT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAAAGAGTATACTCTTCTaGCTTGCCGATTACCTTCTT +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKKSILF*LADYLL
Trigger: AAGAAGGTAATCGGCAAGGCAGAAGAGTATACTCTT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAAAGAGTATACTCTTCTaGCTTGCCGATTACCTTCTT +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRKSILF*LADYLL
Trigger: AAGAAGGTAATCGGCAAGGCAGAAGAGTATACTCTT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACATTCCAAGGCTATTTATaGAAACTGCATCAACATTAC +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTFQGYL*KLHQHY
Trigger: GTAATGTTGATGCAGTTTGCATAAATAGCCTTGGAA...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAATTTTGCTAACCGTATaGATACAGTCACATAGTTTC +
Preference number: 2 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTILLTV*IQSHSF
Trigger: GAAACTATGTGACTGTATCCATACGGTTAGCAAAAT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGACTAAGAAAAGTTCATTaGCACAAATATCCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGLRKVH*HKYPEV
Trigger: TACCTCTGGATATTTGTGCCAATGAACTTTTCTTAG...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTATCTATATTTTTGTCTaGCGAGTAGGTAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: TGDHACLNGKISKVTIIFIYIFV*RVGSGG
Trigger: ACCTCCACTACCTACTCGCCAGACAAAAATATAGAT...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR TCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTGTAGTATCACATGAATaGCAAGACAACCAACAACAA +
Preference number: 2 (lower is better)
Translates to: TGDHACLNGKISKVTIIFVVSHE*QDNQQQ
Trigger: TTGTTGTTGGTTGTCTTGTCATTCATGTGATACTAC...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR TCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTAGTACAGACAGATTCTaGCTCATATATCAAGTCCTA +
Preference number: 2 (lower is better)
Translates to: TGDHACLNGKISKVTIIFSTDRF*LIYQVL
Trigger: TAGGACTTGATATATGAGTCAGAATCTGTCTGTACT...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACACAAAACAAAACCATaGTTCAACTACTTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKHKTKP*FNYFPQ
Trigger: TTGAGGGAAGTAGTTGAAGCATGGTTTTGTTTTGTG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGACACAAAACAAAACCATaGTTCAACTACTTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRHKTKP*FNYFPQ
Trigger: TTGAGGGAAGTAGTTGAAGCATGGTTTTGTTTTGTG...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATTTTGGCAACCATGGTaGAATGAATTGAATCCAATG +
Preference number: 2 (lower is better)
Translates to: PIISSKLQSVVTPKEALEFWQPW*NELNPM
Trigger: CATTGGATTCAATTCATTGCACCATGGTTGCCAAAA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATTTTGGCAACCATGGTaGAATGAATTGAATCCAATG +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRFWQPW*NELNPM
Trigger: CATTGGATTCAATTCATTGCACCATGGTTGCCAAAA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTATACATATTCACAAGTaGAATGGTGGAATCACTGGA +
Preference number: 2 (lower is better)
Translates to: TGDHACLNGKISKVTIIFIHIHK*NGGITG
Trigger: TCCAGTGATTCCACCATTGCACTTGTGAATATGTAT...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACGGAATAAGGATAAATaGCAAAGGTTTACATGGATC +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKRNKDK*QRFTWI
Trigger: GATCCATGTAAACCTTTGGCATTTATCCTTATTCCG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATTAGTTGAGAGGATTTaGGCATTTACAGTCTACACA +
Preference number: 2 (lower is better)
Translates to: EYRQILTHISSPIQSLQKLVERI*AFTVYT
Trigger: TGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTATTGCCACACTTTTTaGAGCAAATTCTTGACCCTT +
Preference number: 2 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMYCHTF*SKFLTL
Trigger: AAGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGACAGACTATTTTATATaGACAGGAGTCCTCAATGAT +
Preference number: 2 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMTDYFI*TGVLND
Trigger: ATCATTGAGGACTCCTGTGCATATAAAATAGTCTGT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAAATAAGATCAAAGAATaGTCGAACTGTAGTCAACTG +
Preference number: 2 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRNKIKE*SNCSQL
Trigger: CAGTTGACTACAGTTCGAGCATTCTTTGATCTTATT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGAGGCAGGGGCATCACTaGCACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: VTETSILLIFKEPTFASLRQGHH*HLGGGG
Trigger: ACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCCT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR CCA 72 bp GTCAACTGCAATTGTTTACACCACACAATGGAGAGGTaGTCTGTTGAGACCCAGGTCTTAGGCACTGCTGAA +
Preference number: 3 (lower is better)
Translates to: VNCNCLHHTMER*SVETQVLGTAE
Trigger: TTCAGCAGTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCCATTGTGTGGTGTAAACAATTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 72 bp AGACTTGTCTTCTCCAAAGGATCTTGCTGTCCATACTaGTGGATCTGTGTGTTCCCTCTTATCACTGGCCCT +
Preference number: 3 (lower is better)
Translates to: RLVFSKGSCCPY*WICVFPLITGP
Trigger: AGGGCCAGTGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAGACAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTACTATGACCGCCCCATaGGACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: TGDHACLNGKISKVTIIFTMTAP*DSSLGD
Trigger: GTCACCCAGGCTGGAGTCCAATGGGGCGGTCATAGT...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAACTATGACCGCCCCATaGGACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: EYRQILTHISSPIQSLQKTMTAP*DSSLGD
Trigger: GTCACCCAGGCTGGAGTCCAATGGGGCGGTCATAGT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR CCA 72 bp CAGTACTGTGCATGCGAAGGCTATCTTCAGCATCGTTaGCAGATAAACGAAGATGGTGTATTGAGGAGTCTT +
Preference number: 3 (lower is better)
Translates to: QYCACEGYLQHR*QINEDGVLRSL
Trigger: AAGACTCCTCAATACACCATCTTCGTTTATCTGCCAACGATGCTGAAGATAGCCTTCGCATGCACAGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCTTCTCCAAAGGATCTaGCTGTCCATACTGATGGAT +
Preference number: 3 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVLLQRI*LSILMD
Trigger: ATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR GCA 72 bp CTTCTGCTACTTCTCTCAAACAAACAAGCACCTGTCTaGCATATCCCCACCACGAGTTTATCATTTCCCTTT +
Preference number: 3 (lower is better)
Translates to: LLLLLSNKQAPV*HIPTTSLSFPF
Trigger: AAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTGTTTGTTTGAGAGAAGTAGCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR GCA 72 bp AGTTTACGCTATCCTAAGGCAAAGAGTATACTCTTCTaGCTTGCCGATTACCTTCTTCCTACTCTTGTAGCT +
Preference number: 3 (lower is better)
Translates to: SLRYPKAKSILF*LADYLLPTLVA
Trigger: AGCTACAAGAGTAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATACTCTTTGCCTTAGGATAGCGTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR GCA 72 bp AGCATAGGATCCCTCTCCATAAAGATACAACTCATATaGGGGATAGCGTTTTGCCAGTTTCTTTGGAAGTTC +
Preference number: 3 (lower is better)
Translates to: SIGSLSIKIQLI*GIAFCQFLWKF
Trigger: GAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTGTATCTTTATGGAGAGGGATCCTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCTTCTTCTAGAGTGTTaGGGATTCACAGGCTGGCTA +
Preference number: 3 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALLLEC*GFTGWL
Trigger: TAGCCAGCCTGTGAATCCCAAACACTCTAGAAGAAG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 72 bp GTAAGCAATGCTCTTGCAACAAGGCCACCCATAGAATaGCCAATTATTGCCACACTTTTTGGAGCAAATTCT +
Preference number: 3 (lower is better)
Translates to: VSNALATRPPIE*PIIATLFGANS
Trigger: AGAATTTGCTCCAAAAAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 72 bp GGCACTGCTGAACTCACAACAGATAAGGCACTGGTATaGTGGCTTAATTTTGGTAGAAAAGTCAATCCTGAA +
Preference number: 3 (lower is better)
Translates to: GTAELTTDKALV*WLNFGRKVNPE
Trigger: TTCAGGATTGACTTTTCTACCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGAGTTCAGCAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 72 bp TCCACCATGAAATCTAACTACCTGTCCAAGTATTTGTaGAAAGGAAGTCTTAACTGTCACCTCGTACCGACA +
Preference number: 3 (lower is better)
Translates to: STMKSNYLSKYL*KGSLNCHLVPT
Trigger: TGTCGGTACGAGGTGACAGTTAAGACTTCCTTTTCACAAATACTTGGACAGGTAGTTAGATTTCATGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CCA 72 bp ATAGATGTAAGAAGACAAGATCCACTTTGTTCATGGTaGCTGCCAAAAACTAACCAAAGGCTTTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: IDVRRQDPLCSW*LPKTNQRLSVA
Trigger: AGCCACAGAAAGCCTTTGGTTAGTTTTTGGCAGCCACCATGAACAAAGTGGATCTTGTCTTCTTACATCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACCTTCTCCAAAGGATCTaGCTGTCCATACTGATGGAT +
Preference number: 3 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHLLQRI*LSILMD
Trigger: ATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAG...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTTTATTTCCCTaGGCCACAAAGGGTGCTAAT +
Preference number: 3 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAHLLFP*ATKGAN
Trigger: ATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGTG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTCTGGTTATTTCTTCTTaGACTGCTGAGCACTTGCTT +
Preference number: 3 (lower is better)
Translates to: LFKASHNEERSLTDAEDSLVISS*TAEHLL
Trigger: AAGCAAGTGCTCAGCAGTCAAAGAAGAAATAACCAG...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTTTCCACCCATCAATCTaGCATTGGTTACCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LFKASHNEERSLTDAEDSFHPSI*HWLPRK
Trigger: TTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAA...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 72 bp GGTAGCCAGCTGGGTTTAAAGTGCATCAAGACTCAATaGAGACCCTGTCAAAATGTAAGTGTATACATATGT +
Preference number: 3 (lower is better)
Translates to: GSQLGLKCIKTQ*RPCQNVSVYIC
Trigger: ACATATGTATACACTTACATTTTGACAGGGTCTTCATTGAGTCTTGATGCACTTTAAACCCAGCTGGCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR GCA 72 bp TCAATAAGATCAAAGAATGCTCGAACTGTAGTCAACTaGAATTGTTTACACCACACAATGGAGAGGTGGTCT +
Preference number: 3 (lower is better)
Translates to: SIRSKNARTVVN*NCLHHTMERWS
Trigger: AGACCACCTCTCCATTGTGTGGTGTAAACAATTGCAGTTGACTACAGTTCGAGCATTCTTTGATCTTATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR GCA 72 bp AATACAATCCATGTTAGTAAGTTAATCACAGTACTGTaGATGCGAAGGCTATCTTCAGCATCGTTGGCAGAT +
Preference number: 3 (lower is better)
Translates to: NTIHVSKLITVL*MRRLSSASLAD
Trigger: ATCTGCCAACGATGCTGAAGATAGCCTTCGCATGCACAGTACTGTGATTAACTTACTAACATGGATTGTATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CCA 72 bp CTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTaGAATACCCGTCAAAGGGAGAATTTTGTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: LITSSITRKKEN*NTRQRENFVFF
Trigger: GAAGAACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAACTTCTCCAAAGGATCTaGCTGTCCATACTGATGGAT +
Preference number: 3 (lower is better)
Translates to: PIISSKLQSVVTPKEALELLQRI*LSILMD
Trigger: ATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAG...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGAAGACAAGATCCACTTaGTTCATGGTGGCTGCCAAA +
Preference number: 3 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMKTRST*FMVAAK
Trigger: TTTGGCAGCCACCATGAACAAAGTGGATCTTGTCTT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAAAGACAAGATCCACTTaGTTCATGGTGGCTGCCAAA +
Preference number: 3 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRKTRST*FMVAAK
Trigger: TTTGGCAGCCACCATGAACAAAGTGGATCTTGTCTT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTTCCACCCATCAATCTaGCATTGGTTACCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAFHPSI*HWLPRK
Trigger: TTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGTATACTCTTCTGCCTaGCCGATTACCTTCTTCCTA +
Preference number: 3 (lower is better)
Translates to: PIISSKLQSVVTPKEALEVYSSA*PITFFL
Trigger: TAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATAC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGTATACTCTTCTGCCTaGCCGATTACCTTCTTCCTA +
Preference number: 3 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRVYSSA*PITFFL
Trigger: TAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATAC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGAGTTCAAGATCAGCTaGGGCAACAAACTGAAACCT +
Preference number: 3 (lower is better)
Translates to: EYRQILTHISSPIQSLQKEFKIS*GNKLKP
Trigger: AGGTTTCAGTTTGTTGCCCAAGCTGATCTTGAACTC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGCCAATAGAACGAACTaGCTTATAACTTCCAGCATT +
Preference number: 3 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTANRTN*LITSSI
Trigger: AATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTGTAGTCAACTGCAATaGTTTACACCACACAATGGA +
Preference number: 3 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHCSQLQ*FTPHNG
Trigger: TCCATTGTGTGGTGTAAACAATTGCAGTTGACTACA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CCA 72 bp GCCACCCATAGAATGACCAATTATTGCCACACTTTTTaGAGCAAATTCTTGACCCTTATAGAGTTTGAGAAT +
Preference number: 3 (lower is better)
Translates to: ATHRMTNYCHTF*SKFLTLIEFEN
Trigger: ATTCTCAAACTCTATAAGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAATTGGTCATTCTATGGGTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAACAGAAACGTCCATTTaGCTAATCTTCAAAGAGCCC +
Preference number: 3 (lower is better)
Translates to: EYRQILTHISSPIQSLQKTETSI*LIFKEP
Trigger: GGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTGTGGCAAAGAGTATTTaGCTAACCGTATGGATACAG +
Preference number: 3 (lower is better)
Translates to: TGDHACLNGKISKVTIIFVAKSI*LTVWIQ
Trigger: CTGTATCCATACGGTTAGCAAAATACTCTTTGCCAC...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGTGGCAAAGAGTATTTaGCTAACCGTATGGATACAG +
Preference number: 3 (lower is better)
Translates to: EYRQILTHISSPIQSLQKVAKSI*LTVWIQ
Trigger: CTGTATCCATACGGTTAGCAAAATACTCTTTGCCAC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR TCA 72 bp ATATCAGGGGGAAACACATACTCTGACAAGTTAAAATaGCGGCATCTAATTCTGGTAACAATAATACATCCC +
Preference number: 3 (lower is better)
Translates to: ISGGNTYSDKLK*RHLILVTIIHP
Trigger: GGGATGTATTATTGTTACCAGAATTAGATGCCGTCATTTTAACTTGTCAGAGTATGTGTTTCCCCCTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR TCA 72 bp TATGATCAAGACAATTGTCAAAAAGGGCAAGTCTGGTaGTATCATCTTGATATCTTTAGGAAGTTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: YDQDNCQKGQVW*YHLDIFRKFRG
Trigger: CCCTCTGAACTTCCTAAAGATATCAAGATGATATCACCAGACTTGCCCTTTTTGACAATTGTCTTGATCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CCA 72 bp GTTATTTTAACAATCCATTATGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAATTGAATCCAATGGTA +
Preference number: 3 (lower is better)
Translates to: VILTIHYDLRHF*QPWCNELNPMV
Trigger: TACCATTGGATTCAATTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTCATAATGGATTGTTAAAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATTCCACCCATCAATCTaGCATTGGTTACCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: PIISSKLQSVVTPKEALEFHPSI*HWLPRK
Trigger: TTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTTATTGCCACACTTTTaGGAGCAAATTCTTGACCCT +
Preference number: 3 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMLLPHF*EQILDP
Trigger: AGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR-3UTR CAA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTCCCATCAATCTTGCATaGGTTACCAAGAAAACATAT +
Preference number: 3 (lower is better)
Translates to: TGDHACLNGKISKVTIIFPINLA*VTKKTY
Trigger: ATATGTTTTCTTGGTAACCAATGCAAGATTGATGGG...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAACCCATCAATCTTGCATaGGTTACCAAGAAAACATAT +
Preference number: 3 (lower is better)
Translates to: PIISSKLQSVVTPKEALEPINLA*VTKKTY
Trigger: ATATGTTTTCTTGGTAACCAATGCAAGATTGATGGG...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACCCATCAATCTTGCATaGGTTACCAAGAAAACATAT +
Preference number: 3 (lower is better)
Translates to: EYRQILTHISSPIQSLQKPINLA*VTKKTY
Trigger: ATATGTTTTCTTGGTAACCAATGCAAGATTGATGGG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACACTTGCTTACCACGTaGATTTTAAAAGCTTGGTAT +
Preference number: 3 (lower is better)
Translates to: EYRQILTHISSPIQSLQKHLLTT*ILKAWY
Trigger: ATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR GCA 72 bp TGTGTAAGTTTGAATCATGTTTCCACCCATCAATCTTaGATTGGTTACCAAGAAAACATATCTCCTTACCAT +
Preference number: 3 (lower is better)
Translates to: CVSLNHVSTHQS*IGYQENISPYH
Trigger: ATGGTAAGGAGATATGTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAAACATGATTCAAACTTACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR TCA 72 bp AAAAGAAATTCCACAGTCACCTTTCAACTACATAAATaGGACACCTGTACTAAAATGGCTTGTACAACAATG +
Preference number: 3 (lower is better)
Translates to: KRNSTVTFQLHK*DTCTKMACTTM
Trigger: CATTGTTGTACAAGCCATTTTAGTACAGGTGTCTCATTTATGTAGTTGAAAGGTGACTGTGGAATTTCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
3UTR GCA 72 bp ACTTCTCGTACAGTTGATAAAACAGACTATTTTATATaGACAGGAGTCCTCAATGATAGTGATCACCATATA +
Preference number: 3 (lower is better)
Translates to: TSRTVDKTDYFI*TGVLNDSDHHI
Trigger: TATATGGTGATCACTATCATTGAGGACTCCTGTGCATATAAAATAGTCTGTTTTATCAACTGTACGAGAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTGGCAGGGGCATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCGRGIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCC...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGACAGGCAGTAACAGCTaGGAGGCTGTAATGGAATCC +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLTGSNS*EAVMES
Trigger: GGATTCCATTACAGCCTCTCAGCTGTTACTGCCTGT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTGATGGGAGGATCACATaGGCCAAAGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVDGRIT*AKEFKA
Trigger: AGCCTTGAACTCTTTGGCTCATGTGATCCTCCCATC...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGATGGGAGGATCACATaGGCCAAAGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSDGRIT*AKEFKA
Trigger: AGCCTTGAACTCTTTGGCTCATGTGATCCTCCCATC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACACTGGGAGGTGGAGGTTaGAGTGAGCTGAAATCGCGC +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTLGGGG*SELKSR
Trigger: GCGCGATTTCAGCTCACTGCAACCTCCACCTCCCAG...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTGGAGAGGTGGTCTGTTaGGACCCAGGTCTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFGEVVC*DPGLRH
Trigger: GTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCC...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR TCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTCTTGCTGTCCATACTaGTGGATCTGTGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVSCCPY*WICVFP
Trigger: AGGGAACACACAGATCCATCAGTATGGACAGCAAGA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACACCACAGCCCCAGGGTTaGCAGAAAGACCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTPQPQG*QKDHED
Trigger: GTCTTCATGGTCTTTCTGGCAACCCTGGGGCTGTGG...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTGCGGGATAGCGTTTTaGCAGTTTCTTTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLCGIAF*QFLWKF
Trigger: GAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTGTAAGCAATGCTCTTaGAACAAGGCCACCCATAGA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLCKQCS*NKATHR
Trigger: TCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGGGCAGGGGCATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMGRGIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCC...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGGCAGGGGCATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEGRGIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGAAATCCCACTACTTTaGGAGGCCGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGEIPLL*EAEVGG
Trigger: TCCTCCCACCTCGGCCTCCCAAAGTAGTGGGATTTC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR CAA 72 bp ACAGTACTGTGCATGCGAAGGCTATCTTCAGCATCGTaGGCAGATAAACGAAGATGGTGTATTGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TVLCMRRLSSAS*ADKRRWCIEES
Trigger: AGACTCCTCAATACACCATCTTCGTTTATCTGCCAACGATGCTGAAGATAGCCTTCGCATGCACAGTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTCAGAGATTAACTGAGTaGAGAAACATGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCQRLTE*RNMVPP
Trigger: TGGCGGCACCATGTTTCTTCACTCAGTTAATCTCTG...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTAGGCCACCCATAGAATaGCCAATTATTGCCACACTT +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVRPPIE*PIIATL
Trigger: AAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCT...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTATCACAGGAGCAACATaGGGTGTGGCTTGTGTAATA +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVITGAT*GVACVI
Trigger: TATTACACAAGCCACACCTCATGTTGCTCCTGTGAT...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGGAGAGGTGGTCTGTTaGGACCCAGGTCTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKGEVVC*DPGLRH
Trigger: GTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGGGAGAGGTGGTCTGTTaGGACCCAGGTCTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMGEVVC*DPGLRH
Trigger: GTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCC...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGCTTGGGCAACAAACTaGAACCTCGTCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSAWATN*NLVSTK
Trigger: TTTTGTAGAGACGAGGTTTCAGTTTGTTGCCCAAGC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTCTGGGAGGTGGAGGTTaGAGTGAGCTGAAATCGCGC +
Preference number: 4 (lower is better)
Translates to: TGDHACLNGKISKVTIIFLGGGG*SELKSR
Trigger: GCGCGATTTCAGCTCACTGCAACCTCCACCTCCCAG...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACACCACAATCCTGCCTCTaGTGTCCTCCTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTPQSCL*CPPSLT
Trigger: AGTCAAGGAAGGAGGACAGCAGAGGCAGGATTGTGG...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGACACACAATGGAGAGGTaGTCTGTTGAGACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGHTMER*SVETQV
Trigger: GACCTGGGTCTCAACAGACCACCTCTCCATTGTGTG...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTAAAATTAGCCAGGTGTaGTGGCGGGTGTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LFKASHNEERSLTDAEDSKISQV*WRVSVV
Trigger: GACTACAGACACCCGCCACCACACCTGGCTAATTTT...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTTTGCCAGAAAGACCATaGAGACATAAAACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCLPERP*RHKTPG
Trigger: ACCTGGCGTTTTATGTCTTCATGGTCTTTCTGGCAA...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAAACTTGGTCTGCTTCTaGAGACTTCCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSNLVCF*RLPPYK
Trigger: TTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTTTCTTCTTTGACTGCTaGGCACTTGCTTACCACGTT +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCFFFDC*ALAYHV
Trigger: AACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAA...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAACAGGCAGTAACAGCTaGGAGGCTGTAATGGAATCC +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTTGSNS*EAVMES
Trigger: GGATTCCATTACAGCCTCTCAGCTGTTACTGCCTGT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACACAGGCAGTAACAGCTaGGAGGCTGTAATGGAATCC +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHTGSNS*EAVMES
Trigger: GGATTCCATTACAGCCTCTCAGCTGTTACTGCCTGT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACGATGGGAGGATCACATaGGCCAAAGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHDGRIT*AKEFKA
Trigger: AGCCTTGAACTCTTTGGCTCATGTGATCCTCCCATC...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACCACAGCCCCAGGGTTaGCAGAAAGACCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKPQPQG*QKDHED
Trigger: GTCTTCATGGTCTTTCTGGCAACCCTGGGGCTGTGG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTTCACAGTACTGTGCATaGGAAGGCTATCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCSQYCA*EGYLQH
Trigger: ATGCTGAAGATAGCCTTCGCATGCACAGTACTGTGA...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTATACTCTTCTGCCTTaGCGATTACCTTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVYTLLP*RLPSSY
Trigger: GTAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAACCTGTAGTCTCACCTaGTGTGGGAGGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRTCSLT*CGRLRW
Trigger: CCATCTCAGCCTCCCACAGCAGGTGAGACTACAGGT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAACCTGTAGTCTCACCTaGTGTGGGAGGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKTCSLT*CGRLRW
Trigger: CCATCTCAGCCTCCCACAGCAGGTGAGACTACAGGT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTTATCTCCACAATCCTaGCTCTGCTGTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALSPQS*LCCPPS
Trigger: GGAAGGAGGACAGCAGAGGCAGGATTGTGGAGATAA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATCACACAATGGAGAGGTaGTCTGTTGAGACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDHTMER*SVETQV
Trigger: GACCTGGGTCTCAACAGACCACCTCTCCATTGTGTG...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTATCTTCAGCATCGTTaGCAGATAAACGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLYLQHR*QINEDG
Trigger: ACCATCTTCGTTTATCTGCCAACGATGCTGAAGATA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGCACTTTTGGCAACCATaGTGCAATGAATTGAATCCA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLHFWQP*CNELNP
Trigger: TGGATTCAATTCATTGCACCATGGTTGCCAAAAGTG...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAAAAATTAGCCAGGTGTaGTGGCGGGTGTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTKISQV*WRVSVV
Trigger: GACTACAGACACCCGCCACCACACCTGGCTAATTTT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAAAATTAGCCAGGTGTaGTGGCGGGTGTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAKISQV*WRVSVV
Trigger: GACTACAGACACCCGCCACCACACCTGGCTAATTTT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGGAAATCCCACTACTTTaGGAGGCCGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMEIPLL*EAEVGG
Trigger: TCCTCCCACCTCGGCCTCCCAAAGTAGTGGGATTTC...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGAAATCCCACTACTTTaGGAGGCCGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKEIPLL*EAEVGG
Trigger: TCCTCCCACCTCGGCCTCCCAAAGTAGTGGGATTTC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGACCTTTTATTTCCCTTaGCCACAAAGGGTGCTAATA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLTFYFP*PQRVLI
Trigger: TATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATATGTTAGGTTCCAGTaGACAAGTTCCCCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSYVRFQ*TSSPVK
Trigger: TTTCACAGGGGAACTTGTCCACTGGAACCTAACATA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAAGAGATTTCGATATTTaGCTTTCTGTCCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSRDFDI*LSVLPP
Trigger: AGGAGGCAGGACAGAAAGCCAAATATCGAAATCTCT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGGGGTTCCACGTTAACTaGAGGAGGCAATTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALGFHVN*RRQFRP
Trigger: TGGACGAAATTGCCTCCTCCAGTTAACGTGGAACCC...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409188.5
3UTR CAA 72 bp GAACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTaGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ELSFSQVTETSI*LIFKEPTFASL
Trigger: CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACACAGAGATTAACTGAGTaGAGAAACATGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTQRLTE*RNMVPP
Trigger: TGGCGGCACCATGTTTCTTCACTCAGTTAATCTCTG...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGGAAGAGCTCCACCATaGAATCTAACTACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTGRAPP*NLTTCP
Trigger: TGGACAGGTAGTTAGATTTCATGGTGGAGCTCTTCC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTTAGAGAAGGCATGCTaGGTAATACAATCCATGTTA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLLEKAC*VIQSML
Trigger: TAACATGGATTGTATTACTCAGCATGCCTTCTCTAA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTATAAACTAAACAACTaGACTGCTCCAATACCAGGA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLYKLNN*TAPIPG
Trigger: TCCTGGTATTGGAGCAGTTCAGTTGTTTAGTTTATA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTGGGTATGTCTCAGCCTaGGTTTACGCTATCCTAAGG +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFGYVSA*VYAILR
Trigger: CCTTAGGATAGCGTAAACTCAGGCTGAGACATACCC...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGTAGTATCACATGAATaGCAAGACAACCAACAACAA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLVVSHE*QDNQQQ
Trigger: TTGTTGTTGGTTGTCTTGTCATTCATGTGATACTAC...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTTGGATTTGGATTACTaGCCTGACTTTTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLLDLDY*PDFSFL
Trigger: TAGGAAAGAAAAGTCAGGTCAGTAATCCAAATCCAA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTCCACCCATCAATCTTaGATTGGTTACCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVSTHQS*IGYQEN
Trigger: GTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGATTTGGCTTTCTGTCCTaGCTCCTTACTTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGFGFLS*LLTSKA
Trigger: AGCCTTGGAAGTAAGGAGGCAGGACAGAAAGCCAAA...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACACACAATGGAGAGGTaGTCTGTTGAGACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKHTMER*SVETQV
Trigger: GACCTGGGTCTCAACAGACCACCTCTCCATTGTGTG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAATGGAGCCTGTGCAATaGTTAGTGAATCTTCATAAG +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSMEPVQ*LVNLHK
Trigger: CTTATGAAGATTCACTAACCATTGCACAGGCTCCAT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGATAAGAAAGAAGTATaGCTAGTGCTCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSDKKEV*LVLHKL
Trigger: CAACTTGTGGAGCACTAGCCATACTTCTTTCTTATC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTATCTTCAGCATCGTTaGCAGATAAACGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVYLQHR*QINEDG
Trigger: ACCATCTTCGTTTATCTGCCAACGATGCTGAAGATA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCACACTTTTGGCAACCATaGTGCAATGAATTGAATCCA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSHFWQP*CNELNP
Trigger: TGGATTCAATTCATTGCACCATGGTTGCCAAAAGTG...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHDLRHF*QPWCNE
Trigger: TTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTC...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCGCTCGAGGACATCCCTaGGTACTAACAAGGATACAT +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAARGHP*VLTRIH
Trigger: ATGTATCCTTGTTAGTACCCAGGGATGTCCTCGAGC...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACGCTCGAGGACATCCCTaGGTACTAACAAGGATACAT +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHARGHP*VLTRIH
Trigger: ATGTATCCTTGTTAGTACCCAGGGATGTCCTCGAGC...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAAGAACCTCCATCTCTTaGGGAATGGGTTCCACGTTA +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTRTSIS*GMGSTL
Trigger: TAACGTGGAACCCATTCCCCAAGAGATGGAGGTTCT...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409188.5
CDS-3UTR TCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAAGGCCACCCATAGAATaGCCAATTATTGCCACACTT +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGRPPIE*PIIATL
Trigger: AAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCT...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR TCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGATCACAGGAGCAACATaGGGTGTGGCTTGTGTAATA +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALITGAT*GVACVI
Trigger: TATTACACAAGCCACACCTCATGTTGCTCCTGTGAT...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR TCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATCACAGGAGCAACATaGGGTGTGGCTTGTGTAATA +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTITGAT*GVACVI
Trigger: TATTACACAAGCCACACCTCATGTTGCTCCTGTGAT...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR TCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTGTATTGTTTTCTGGTTaGGCAATATGGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVVLFSG*AIWSFR
Trigger: TCTGAAACTCCATATTGCTCAACCAGAAAACAATAC...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGTATTGTTTTCTGGTTaGGCAATATGGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSVLFSG*AIWSFR
Trigger: TCTGAAACTCCATATTGCTCAACCAGAAAACAATAC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTCTGACAAGTTAAAATaGCGGCATCTAATTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVSDKLK*RHLILV
Trigger: TACCAGAATTAGATGCCGTCATTTTAACTTGTCAGA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GGAATGAAGACAAAGCATGGAAGCCTATATAAATGTGCTGACCCAAAAGCAATCGGGAAACACATACTCTaGCAAGTTAAAATGACGGCA +
Preference number: 4 (lower is better)
Translates to: GMKTKHGSLYKCADPKAIGKHIL*QVKMTA
Trigger: TGCCGTCATTTTAACTTGTCAGAGTATGTGTTTCCC...GATTGCTTTTGGGTCAGCACATTTATATAGGCTTCCATGCTTTGTCTTCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAACGAAGATGGTGTATTaGGGAGTCTTTATGATGATT +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSTKMVY*GVFMMI
Trigger: AATCATCATAAAGACTCCTCAATACACCATCTTCGT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAAAATAGCCAGGACCTaGGGAAGAACTGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAKIART*GRTEKR
Trigger: TCTCTTCTCAGTTCTTCCTCAGGTCCTGGCTATTTT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTTGCATCAAGACTCAATaGAGACCCTGTCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCCIKTQ*RPCQNV
Trigger: TACATTTTGACAGGGTCTTCATTGAGTCTTGATGCA...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGTAGTATCACATGAATaGCAAGACAACCAACAACAA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSVVSHE*QDNQQQ
Trigger: TTGTTGTTGGTTGTCTTGTCATTCATGTGATACTAC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAATGAGTAGTATCACATaGATGACAAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSMSSIT*MTRQPT
Trigger: TGTTGGTTGTCTTGTCATTCATGTGATACTACTCAT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATTACAATGTACAGAATaGGTACAGACAGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSLQCTE*VQTDSD
Trigger: GTCAGAATCTGTCTGTACTCATTCTGTACATTGTAA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATATCATGTAGGCTTTTaGACAGTTAATAGCTCTACG +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSYHVGF*TVNSST
Trigger: CGTAGAGCTATTAACTGTTCAAAAGCCTACATGATA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTGGTTCTTCTCATCTCTaGTACTCCGGGTACTCAAAC +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFGSSHL*YSGYSN
Trigger: GTTTGAGTACCCGGAGTATCAGAGATGAGAAGAACC...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp GGAATGAAGACAAAGCATGGAAGCCTATATAAATGTGCTGACCCAAAAGCAATCACATGTAGCTCATACTaGACTTATTCTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GMKTKHGSLYKCADPKAITCSSY*TYSPRS
Trigger: GCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGT...GATTGCTTTTGGGTCAGCACATTTATATAGGCTTCCATGCTTTGTCTTCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACATGTAAGCAATGCTCTTaGAACAAGGCCACCCATAGA +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTCKQCS*NKATHR
Trigger: TCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACA...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGTTTCAGTGTAAGCAATaGTCTTGCAACAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALFQCKQ*SCNKAT
Trigger: GGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAA...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCACAAAACAAAACCATaGTTCAACTACTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVHKTKP*FNYFPQ
Trigger: TTGAGGGAAGTAGTTGAAGCATGGTTTTGTTTTGTG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAAAACAAGCACCTGTCTaGCATATCCCCACCACGAGT +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKKQAPV*HIPTTS
Trigger: ACTCGTGGTGGGGATATGGCAGACAGGTGCTTGTTT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAAAACAAGCACCTGTCTaGCATATCCCCACCACGAGT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEKQAPV*HIPTTS
Trigger: ACTCGTGGTGGGGATATGGCAGACAGGTGCTTGTTT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAAAACAAGCACCTGTCTaGCATATCCCCACCACGAGT +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVKQAPV*HIPTTS
Trigger: ACTCGTGGTGGGGATATGGCAGACAGGTGCTTGTTT...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTTTGGCAGCATAACATaGCAAACACTTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVFGSIT*QTLSES
Trigger: ACTTTCTGAAAGTGTTTGGCATGTTATGCTGCCAAA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATTTGGCAGCATAACATaGCAAACACTTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSFGSIT*QTLSES
Trigger: ACTTTCTGAAAGTGTTTGGCATGTTATGCTGCCAAA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTTTATTACATACCCTTaGTCAAACTACCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLFITYP*SNYLHV
Trigger: GACATGAAGGTAGTTTGAGCAAGGGTATGTAATAAA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGTTTACACCACACAATaGAGAGGTGGTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGVYTTQ*RGGLLR
Trigger: TCTCAACAGACCACCTCTCCATTGTGTGGTGTAAAC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAGTTTACACCACACAATaGAGAGGTGGTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTVYTTQ*RGGLLR
Trigger: TCTCAACAGACCACCTCTCCATTGTGTGGTGTAAAC...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTGCAGATAAACGAAGATaGTGTATTGAGGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVADKRR*CIEESL
Trigger: TAAAGACTCCTCAATACACCATCTTCGTTTATCTGC...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTCCACTTTGTTCATGGTaGCTGCCAAAAACTAACCAA +
Preference number: 4 (lower is better)
Translates to: LFKASHNEERSLTDAEDSPLCSW*LPKTNQ
Trigger: TTGGTTAGTTTTTGGCAGCCACCATGAACAAAGTGG...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATTAGTTGAGAGGATTTaGGCATTTACAGTCTACACA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSLVERI*AFTVYT
Trigger: TGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATGCTCGAGGACATCCCTaGGTACTAACAAGGATACAT +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDARGHP*VLTRIH
Trigger: ATGTATCCTTGTTAGTACCCAGGGATGTCCTCGAGC...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACAAAAGTCAGGCACAGTaGCATGTACCTGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHKSQAQ*HVPVVS
Trigger: TGAGACTACAGGTACATGCCACTGTGCCTGACTTTT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGATTTTGCTAACCGTATaGATACAGTCACATAGTTTC +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLILLTV*IQSHSF
Trigger: GAAACTATGTGACTGTATCCATACGGTTAGCAAAAT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGCTAAGAAAAGTTCATTaGCACAAATATCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VTETSILLIFKEPTFASLLRKVH*HKYPEV
Trigger: TACCTCTGGATATTTGTGCCAATGAACTTTTCTTAG...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GGAATGAAGACAAAGCATGGAAGCCTATATAAATGTGCTGACCCAAAAGCAATCTATGTTAGGTTCCAGTaGACAAGTTCCCCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GMKTKHGSLYKCADPKAIYVRFQ*TSSPVK
Trigger: TTTCACAGGGGAACTTGTCCACTGGAACCTAACATA...GATTGCTTTTGGGTCAGCACATTTATATAGGCTTCCATGCTTTGTCTTCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCTGCATCAACATTACTaGGCAGAGAAATACTTAGTA +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVLHQHY*AEKYLV
Trigger: TACTAAGTATTTCTCTGCCCAGTAATGTTGATGCAG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR TCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAAACTTGGTCTGCTTCTaGAGACTTCCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTNLVCF*RLPPYK
Trigger: TTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTT...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR TCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTAGGCCACCCATAGAATaGCCAATTATTGCCACACTT +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFRPPIE*PIIATL
Trigger: AAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCT...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR TCA 90 bp GTTTCAGAGAAATTTCTGTGGAAGATGGAGCCTGTGCAATGGTTAGTGAATCTTGATAAGGCACTGGTATaGTGGCTTAATTTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VSEKFLWKMEPVQWLVNLDKALV*WLNFGR
Trigger: TCTACCAAAATTAAGCCATCATACCAGTGCCTTATC...AAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTAAAGGGCAAGTCTGGTaGTATCATCTTGATATCTTT +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCKGQVW*YHLDIF
Trigger: AAAGATATCAAGATGATATCACCAGACTTGCCCTTT...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GTTTCAGAGAAATTTCTGTGGAAGATGGAGCCTGTGCAATGGTTAGTGAATCTTGCAACCATGGTGCAATaGATTGAATCCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: VSEKFLWKMEPVQWLVNLATMVQ*IESNGI
Trigger: TATACCATTGGATTCAATTCATTGCACCATGGTTGC...AAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATAAAATAGCCAGGACCTaGGGAAGAACTGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDKIART*GRTEKR
Trigger: TCTCTTCTCAGTTCTTCCTCAGGTCCTGGCTATTTT...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAAAATGTGGGTCAACTaGTTTATCTGGGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAKMWVN*FIWGFR
Trigger: TCTGAACCCCCAGATAAATCAGTTGACCCACATTTT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACCTACACATTAATACCTaGGCAGAGACTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHLHINT*AETEGK
Trigger: TTTGCCTTCAGTCTCTGCTCAGGTATTAATGTGTAG...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAACATGTAGCTCATACTaGACTTATTCTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTTCSSY*TYSPRS
Trigger: GCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAAGATACAACTCATATaGGGGATAGCGTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAKIQLI*GIAFCQ
Trigger: CTGGCAAAACGCTATCCCGCATATGAGTTGTATCTT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAAAGATACAACTCATATaGGGGATAGCGTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTKIQLI*GIAFCQ
Trigger: CTGGCAAAACGCTATCCCGCATATGAGTTGTATCTT...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGCTCTGCTTTTCTAAGTaGAATGGAGCCAATAGAACG +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALLCFSK*NGANRT
Trigger: CGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAG...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTAATAAGATCAAAGAATaGTCGAACTGTAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVNKIKE*SNCSQL
Trigger: CAGTTGACTACAGTTCGAGCATTCTTTGATCTTATT...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp GCATTACCAGGAAGAAAGAGAACTGGAATACCCGTCAAAGGGAGAATTTTGTGTCAACAGATAAGGCACTaGTATGATGGCTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: ALPGRKRTGIPVKGRILCQQIRH*YDGLIL
Trigger: CAAAATTAAGCCATCATACCAGTGCCTTATCTGTTG...ACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTGTTTACACCACACAATaGAGAGGTGGTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFVYTTQ*RGGLLR
Trigger: TCTCAACAGACCACCTCTCCATTGTGTGGTGTAAAC...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTCTACATAGGTCCATTTaGACACTTTTACTAGAACCC +
Preference number: 4 (lower is better)
Translates to: LFKASHNEERSLTDAEDSLHRSI*TLLLEP
Trigger: GGGTTCTAGTAAAAGTGTCCAAATGGACCTATGTAG...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTCAGAGAAATTTCTGTaGAAGATGGAGCCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRASEKFL*KMEPVQ
Trigger: TTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAATGGGTATTGTTTTCTaGTTGAGCAATATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSMGIVF*LSNMEF
Trigger: AAACTCCATATTGCTCAACCAGAAAACAATACCCAT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRDLRHF*QPWCNE
Trigger: TTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGACCTCAGGCACTTTTaGCAACCATGGTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVDLRHF*QPWCNE
Trigger: TTCATTGCACCATGGTTGCCAAAAGTGCCTGAGGTC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATATTCACAAGTGCAATaGTGGAATCACTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSYSQVQ*WNHWKF
Trigger: AAATTTCCAGTGATTCCACCATTGCACTTGTGAATA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTAAAAGTCAGGCACAGTaGCATGTACCTGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFKSQAQ*HVPVVS
Trigger: TGAGACTACAGGTACATGCCACTGTGCCTGACTTTT...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp AATAGAACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTGGACTGCTTTCTTATCCTaGCAAATGTCATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NRTNLLITSSITRKKENWTAFLS*QMSCTP
Trigger: TGGAGTGCATGACATTTGCCAGGATAAGAAAGCAGT...CCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAACACCTGTACTAAAATaGCTTGTACAACAATGTACA +
Preference number: 4 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSTPVLK*LVQQCT
Trigger: TGTACATTGTTGTACAAGCCATTTTAGTACAGGTGT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTTTTCCACTGCACAGTaGAGGAAGGGAAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAFSTAQ*RKGRLF
Trigger: AAATAACCTTCCCTTCCTCCACTGTGCAGTGGAAAA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATCGAAGACAAGGATTTaGGGCCAATTTGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRSKTRI*GQFERT
Trigger: GGTCCTCTCAAATTGGCCCCAAATCCTTGTCTTCGA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR CAA 72 bp TTTCACCAACCTCGAAGACAAGGATTTGGGGCCAATTaGAGAGGACCACCCATAATAAAATGTACAGTTATA +
Preference number: 4 (lower is better)
Translates to: FHQPRRQGFGAN*RGPPIIKCTVI
Trigger: TATAACTGTACATTTTATTATGGGTGGTCCTCTCAAATTGGCCCCAAATCCTTGTCTTCGAGGTTGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR TCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTTGCCAGAAAGACCATaGAGACATAAAACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMLPERP*RHKTPG
Trigger: ACCTGGCGTTTTATGTCTTCATGGTCTTTCTGGCAA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATTCTTCTTTGACTGCTaGGCACTTGCTTACCACGTT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEFFFDC*ALAYHV
Trigger: AACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACGCAACCATGGTGCAATaGATTGAATCCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHATMVQ*IESNGI
Trigger: TATACCATTGGATTCAATTCATTGCACCATGGTTGC...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGAAAATAGCCAGGACCTaGGGAAGAACTGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMKIART*GRTEKR
Trigger: TCTCTTCTCAGTTCTTCCTCAGGTCCTGGCTATTTT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGCTTGGGCAACAAACTaGAACCTCGTCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRAWATN*NLVSTK
Trigger: TTTTGTAGAGACGAGGTTTCAGTTTGTTGCCCAAGC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGCTTGGGCAACAAACTaGAACCTCGTCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVAWATN*NLVSTK
Trigger: TTTTGTAGAGACGAGGTTTCAGTTTGTTGCCCAAGC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp CTTTTCAAAGCTAGCCACAATGAAGAAAGAAGTCTCACAGATGCAGAAGACAGTTATCATGTAGGCTTTTaGACAGTTAATAGCTCTACG +
Preference number: 4 (lower is better)
Translates to: LFKASHNEERSLTDAEDSYHVGF*TVNSST
Trigger: CGTAGAGCTATTAACTGTTCAAAAGCCTACATGATA...ACTGTCTTCTGCATCTGTGAGACTTCTTTCTTCATTGTGGCTAGCTTTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAATATACAACAACTGTaGGTACACAGAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRANIQQL*VHRNVG
Trigger: GCCCACATTTCTGTGTACTCACAGTTGTTGTATATT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTAAGATACAACTCATATaGGGGATAGCGTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PTICIQHSALTIDMSVDFKIQLI*GIAFCQ
Trigger: CTGGCAAAACGCTATCCCGCATATGAGTTGTATCTT...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACGAAGTCAATGTCCTCTaGTTTTCTAAGTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHEVNVL*FSKCNG
Trigger: TCCATTGCACTTAGAAAAGCAGAGGACATTGACTTC...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTATGTAAGCAATGCTCTTaGAACAAGGCCACCCATAGA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVCKQCS*NKATHR
Trigger: TCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACA...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTTTCAGTGTAAGCAATaGTCTTGCAACAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMFQCKQ*SCNKAT
Trigger: GGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATTTCAGTGTAAGCAATaGTCTTGCAACAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKFQCKQ*SCNKAT
Trigger: GGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTCACAGTACTGTGCATaGGAAGGCTATCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMSQYCA*EGYLQH
Trigger: ATGCTGAAGATAGCCTTCGCATGCACAGTACTGTGA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATCACAGTACTGTGCATaGGAAGGCTATCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALESQYCA*EGYLQH
Trigger: ATGCTGAAGATAGCCTTCGCATGCACAGTACTGTGA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTTAATCACAGTACTGTaGATGCGAAGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHLITVL*MRRLSS
Trigger: TGAAGATAGCCTTCGCATGCACAGTACTGTGATTAA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTCCACCCATCAATCTTaGATTGGTTACCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRASTHQS*IGYQEN
Trigger: GTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACATCCACCCATCAATCTTaGATTGGTTACCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTSTHQS*IGYQEN
Trigger: GTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGA...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACACTAAACAACTGAACTaGTCCAATACCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHTKQLN*SNTRKQ
Trigger: TTGCTTCCTGGTATTGGAGCAGTTCAGTTGTTTAGT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACAAGAGTATACTCTTCTaGCTTGCCGATTACCTTCTT +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHKSILF*LADYLL
Trigger: AAGAAGGTAATCGGCAAGGCAGAAGAGTATACTCTT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GTTTCAGAGAAATTTCTGTGGAAGATGGAGCCTGTGCAATGGTTAGTGAATCTTATACATATTCACAAGTaGAATGGTGGAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: VSEKFLWKMEPVQWLVNLIHIHK*NGGITG
Trigger: TCCAGTGATTCCACCATTGCACTTGTGAATATGTAT...AAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCTACATAGGTCCATTTaGACACTTTTACTAGAACCC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALHRSI*TLLLEP
Trigger: GGGTTCTAGTAAAAGTGTCCAAATGGACCTATGTAG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACCAGATACTTAATTGTTaGCAGCAGTTCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHQILNC*QQFSFP
Trigger: TGGAAAGCTGAACTGCTGCCAACAATTAAGTATCTG...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCGATAAGAAAGAAGTATaGCTAGTGCTCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRADKKEV*LVLHKL
Trigger: CAACTTGTGGAGCACTAGCCATACTTCTTTCTTATC...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTAAAAGTCAGGCACAGTaGCATGTACCTGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TGDHACLNGKISKVTIIFKSQAQ*HVPVVS
Trigger: TGAGACTACAGGTACATGCCACTGTGCCTGACTTTT...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAATCTATATTTTTGTCTaGCGAGTAGGTAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTIYIFV*RVGSGG
Trigger: ACCTCCACTACCTACTCGCCAGACAAAAATATAGAT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR CAA 72 bp GGCACTGTTTCATCAATACCCTGTAATGATTTGCGTTaGAATCTAGGATACTCACAGATCATGGACCATATA +
Preference number: 4 (lower is better)
Translates to: GTVSSIPCNDLR*NLGYSQIMDHI
Trigger: TATATGGTCCATGATCTGTGAGTATCCTAGATTCAAACGCAAATCATTACAGGGTATTGATGAAACAGTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409475.5
3UTR CAA 72 bp CTTCAGCATCGTTGGCAGATAAACGAAGATGGTGTATaGAGGAGTCTTTATGATGATTGGATTTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LQHRWQINEDGV*RSLYDDWISFH
Trigger: GTGAAAAGAAATCCAATCATCATAAAGACTCCTCAATACACCATCTTCGTTTATCTGCCAACGATGCTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAAGTCAAAGTGGTACTTaGAGTCAATGTCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRSQSGT*SQCPLL
Trigger: AAGCAGAGGACATTGACTTCAAGTACCACTTTGACT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAAACTTGGTCTGCTTCTaGAGACTTCCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKNLVCF*RLPPYK
Trigger: TTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTCTGACAAGTTAAAATaGCGGCATCTAATTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHSDKLK*RHLILV
Trigger: TACCAGAATTAGATGCCGTCATTTTAACTTGTCAGA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGGGAAACACATACTCTaGCAAGTTAAAATGACGGCA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRGKHIL*QVKMTA
Trigger: TGCCGTCATTTTAACTTGTCAGAGTATGTGTTTCCC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAAAAGGGCAAGTCTGGTaGTATCATCTTGATATCTTT +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTKGQVW*YHLDIF
Trigger: AAAGATATCAAGATGATATCACCAGACTTGCCCTTT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTATAAACTAAACAACTaGACTGCTCCAATACCAGGA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHYKLNN*TAPIPG
Trigger: TCCTGGTATTGGAGCAGTTCAGTTGTTTAGTTTATA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAATGAGTAGTATCACATaGATGACAAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTMSSIT*MTRQPT
Trigger: TGTTGGTTGTCTTGTCATTCATGTGATACTACTCAT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAAAAATGTGGGTCAACTaGTTTATCTGGGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKKMWVN*FIWGFR
Trigger: TCTGAACCCCCAGATAAATCAGTTGACCCACATTTT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGATTGGATTTGGATTACTaGCCTGACTTTTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGLDLDY*PDFSFL
Trigger: TAGGAAAGAAAAGTCAGGTCAGTAATCCAAATCCAA...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAGTACAGACAGATTCTaGCTCATATATCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRASTDRF*LIYQVL
Trigger: TAGGACTTGATATATGAGTCAGAATCTGTCTGTACT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAAGTACAGACAGATTCTaGCTCATATATCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTSTDRF*LIYQVL
Trigger: TAGGACTTGATATATGAGTCAGAATCTGTCTGTACT...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTTACAATGTACAGAATaGGTACAGACAGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALQCTE*VQTDSD
Trigger: GTCAGAATCTGTCTGTACTCATTCTGTACATTGTAA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTATCATGTAGGCTTTTaGACAGTTAATAGCTCTACG +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAYHVGF*TVNSST
Trigger: CGTAGAGCTATTAACTGTTCAAAAGCCTACATGATA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGTAAAAAGTCCAATATaGAACAGAACGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGVKSPI*NRTSAT
Trigger: TGTTGCACTCGTTCTGTTTCATATTGGACTTTTTAC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR TCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGGTAAAAAGTCCAATATaGAACAGAACGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALVKSPI*NRTSAT
Trigger: TGTTGCACTCGTTCTGTTTCATATTGGACTTTTTAC...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGACTCTGCTTTTCTAAGTaGAATGGAGCCAATAGAACG +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRLCFSK*NGANRT
Trigger: CGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAG...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTACTCTGCTTTTCTAAGTaGAATGGAGCCAATAGAACG +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVLCFSK*NGANRT
Trigger: CGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAG...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATGAAGTCAATGTCCTCTaGTTTTCTAAGTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDEVNVL*FSKCNG
Trigger: TCCATTGCACTTAGAAAAGCAGAGGACATTGACTTC...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCGGAATAAGGATAAATaGCAAAGGTTTACATGGATC +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRARNKDK*QRFTWI
Trigger: GATCCATGTAAACCTTTGGCATTTATCCTTATTCCG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR GCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTTTTGGCAACCATGGTaGAATGAATTGAATCCAATG +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHFWQPW*NELNPM
Trigger: CATTGGATTCAATTCATTGCACCATGGTTGCCAAAA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACATTTTGGCAACCATGGTaGAATGAATTGAATCCAATG +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTFWQPW*NELNPM
Trigger: CATTGGATTCAATTCATTGCACCATGGTTGCCAAAA...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACATTCATGTACAAACTTaGTCTGCTTCTGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHIHVQT*SASEDF
Trigger: GAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAAT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGATTCATGTACAAACTTaGTCTGCTTCTGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALIHVQT*SASEDF
Trigger: GAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAAT...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGCAGCTACAGAAAGTGTaGTTAAATTTATGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: SAVYASKNPTICIQHSALQLQKV*LNLCVE
Trigger: CTCGACACATAAATTTAACCACACTTTCTGTAGCTG...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACACAACAGATAAGGCACTaGTATGATGGCTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTQQIRH*YDGLIL
Trigger: CAAAATTAAGCCATCATACCAGTGCCTTATCTGTTG...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACACTTCCACGAACAGATaGTACATAAACAACAAGATG +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHTSTNR*YINNKM
Trigger: CATCTTGTTGTTTATGTACCATCTGTTCGTGGAAGT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp AATAGAACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTGGACTTCCACGAACAGATaGTACATAAACAACAAGATG +
Preference number: 4 (lower is better)
Translates to: NRTNLLITSSITRKKENWTSTNR*YINNKM
Trigger: CATCTTGTTGTTTATGTACCATCTGTTCGTGGAAGT...CCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTATCAGAGAAATTTCTGTaGAAGATGGAGCCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVSEKFL*KMEPVQ
Trigger: TTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGA...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTCCACTTTGTTCATGGTaGCTGCCAAAAACTAACCAA +
Preference number: 4 (lower is better)
Translates to: TGDHACLNGKISKVTIIFPLCSW*LPKTNQ
Trigger: TTGGTTAGTTTTTGGCAGCCACCATGAACAAAGTGG...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATCCACTTTGTTCATaGTGGCTGCCAAAAACTAAC +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVDPLCS*WLPKTN
Trigger: GTTAGTTTTTGGCAGCCACCATGAACAAAGTGGATC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGATTAGTTGAGAGGATTTaGGCATTTACAGTCTACACA +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGLVERI*AFTVYT
Trigger: TGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAA...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CCA 90 bp AATAGAACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTGGTTAGTTGAGAGGATTTaGGCATTTACAGTCTACACA +
Preference number: 4 (lower is better)
Translates to: NRTNLLITSSITRKKENWLVERI*AFTVYT
Trigger: TGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAA...CCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGTCATGCACTCCAAATaGATTTTCCCCAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTVMHSK*IFPSKF
Trigger: AAATTTACTGGGGAAAATCCATTTGGAGTGCATGAC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp AATAGAACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTGGGTCATGCACTCCAAATaGATTTTCCCCAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: NRTNLLITSSITRKKENWVMHSK*IFPSKF
Trigger: AAATTTACTGGGGAAAATCCATTTGGAGTGCATGAC...CCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAACTGCTTTCTTATCCTaGCAAATGTCATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRTAFLS*QMSCTP
Trigger: TGGAGTGCATGACATTTGCCAGGATAAGAAAGCAGT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAACTGCTTTCTTATCCTaGCAAATGTCATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALETAFLS*QMSCTP
Trigger: TGGAGTGCATGACATTTGCCAGGATAAGAAAGCAGT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTCATGCATGTTTAAATaGAAAGATCAGCAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHSCMFK*KDQQGD
Trigger: GTCACCTTGCTGATCTTTCCATTTAAACATGCATGA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR CAA 72 bp AGAGGACCACCCATAATAAAATGTACAGTTATAAAATaGCAGGGCACTCTTTATCATTTCAAGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: RGPPIIKCTVIK*QGTLYHFKAHS
Trigger: AGAGTGTGCCTTGAAATGATAAAGAGTGCCCTGCAATTTTATAACTGTACATTTTATTATGGGTGGTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR CAA 72 bp TCACAACAGATAAGGCACTGGTATGATGGCTTAATTTaGGTAGAAAAGTCAATCCTGAACGAACTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SQQIRHWYDGLI*VEKSILNELGN
Trigger: ATTACCAAGTTCGTTCAGGATTGACTTTTCTACCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
3UTR CAA 72 bp ATTTCTTCTTTGACTGCTGAGCACTTGCTTACCACGTaGATTTTAAAAGCTTGGTATATCTGTCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ISSLTAEHLLTT*ILKAWYICPKF
Trigger: GAACTTTGGACAGATATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGATAAGGCACTGGTATaGTGGCTTAATTTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKDKALV*WLNFGR
Trigger: TCTACCAAAATTAAGCCATCATACCAGTGCCTTATC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATAAGGCACTGGTATaGTGGCTTAATTTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVDKALV*WLNFGR
Trigger: TCTACCAAAATTAAGCCATCATACCAGTGCCTTATC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGCAACCATGGTGCAATaGATTGAATCCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRATMVQ*IESNGI
Trigger: TATACCATTGGATTCAATTCATTGCACCATGGTTGC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATGCATCAAGACTCAATaGAGACCCTGTCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALECIKTQ*RPCQNV
Trigger: TACATTTTGACAGGGTCTTCATTGAGTCTTGATGCA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATGCATCAAGACTCAATaGAGACCCTGTCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRCIKTQ*RPCQNV
Trigger: TACATTTTGACAGGGTCTTCATTGAGTCTTGATGCA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTACCTGAGCAGAGACTaGAGGCAAATATTCATCTAT +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMYLSRD*RQIFIY
Trigger: ATAGATGAATATTTGCCTTCAGTCTCTGCTCAGGTA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGAAGTCAATGTCCTCTaGTTTTCTAAGTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVEVNVL*FSKCNG
Trigger: TCCATTGCACTTAGAAAAGCAGAGGACATTGACTTC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp AATAGAACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTGGAATAAGATCAAAGAATaGTCGAACTGTAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: NRTNLLITSSITRKKENWNKIKE*SNCSQL
Trigger: CAGTTGACTACAGTTCGAGCATTCTTTGATCTTATT...CCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTTAATCACAGTACTGTaGATGCGAAGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMLITVL*MRRLSS
Trigger: TGAAGATAGCCTTCGCATGCACAGTACTGTGATTAA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp AATAGAACGAACTTGCTTATAACTTCCAGCATTACCAGGAAGAAAGAGAACTGGACAGACTATTTTATATaGACAGGAGTCCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: NRTNLLITSSITRKKENWTDYFI*TGVLND
Trigger: ATCATTGAGGACTCCTGTGCATATAAAATAGTCTGT...CCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTACTAAACAACTGAACTaGTCCAATACCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: TGDHACLNGKISKVTIIFTKQLN*SNTRKQ
Trigger: TTGCTTCCTGGTATTGGAGCAGTTCAGTTGTTTAGT...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAACTAAACAACTGAACTaGTCCAATACCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKTKQLN*SNTRKQ
Trigger: TTGCTTCCTGGTATTGGAGCAGTTCAGTTGTTTAGT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAAAGAGTATACTCTTCTaGCTTGCCGATTACCTTCTT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEKSILF*LADYLL
Trigger: AAGAAGGTAATCGGCAAGGCAGAAGAGTATACTCTT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGATTCCAAGGCTATTTATaGAAACTGCATCAACATTAC +
Preference number: 4 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGFQGYL*KLHQHY
Trigger: GTAATGTTGATGCAGTTTGCATAAATAGCCTTGGAA...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTGTAAGTTCAGAACAATaGTACCACCTTCTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: TGDHACLNGKISKVTIIFVSSEQ*YHLLLE
Trigger: TTCTAGGAGAAGGTGGTAGCATTGTTCTGAACTTAC...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGAAGTTCTATTTTCTTaGTCTCCAGAACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVEVLFS*SPEPPS
Trigger: AGATGGAGGTTCTGGAGAGCAAGAAAATAGAACTTC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409188.5
CDS-3UTR CCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATATTCATGTACAAACTTaGTCTGCTTCTGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDIHVQT*SASEDF
Trigger: GAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAAT...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATCAACAGATAAGGCACTaGTATGATGGCTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDQQIRH*YDGLIL
Trigger: CAAAATTAAGCCATCATACCAGTGCCTTATCTGTTG...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGACAGATACTTAATTGTTaGCAGCAGTTCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRQILNC*QQFSFP
Trigger: TGGAAAGCTGAACTGCTGCCAACAATTAAGTATCTG...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAATGGAGCCTGTGCAATaGTTAGTGAATCTTCATAAG +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVMEPVQ*LVNLHK
Trigger: CTTATGAAGATTCACTAACCATTGCACAGGCTCCAT...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCATGGGTATTGTTTTCTaGTTGAGCAATATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAMGIVF*LSNMEF
Trigger: AAACTCCATATTGCTCAACCAGAAAACAATACCCAT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGATAAGAAAGAAGTATaGCTAGTGCTCCACAAGTTG +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKDKKEV*LVLHKL
Trigger: CAACTTGTGGAGCACTAGCCATACTTCTTTCTTATC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTATCTTCAGCATCGTTaGCAGATAAACGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMYLQHR*QINEDG
Trigger: ACCATCTTCGTTTATCTGCCAACGATGCTGAAGATA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACCCATCAATCTTGCATTaGTTACCAAGAAAACATATC +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHPSILH*LPRKHI
Trigger: GATATGTTTTCTTGGTAACCAATGCAAGATTGATGG...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACACCATCAATCTTGCATTaGTTACCAAGAAAACATATC +
Preference number: 4 (lower is better)
Translates to: AVYASKNPTICIQHSALTPSILH*LPRKHI
Trigger: GATATGTTTTCTTGGTAACCAATGCAAGATTGATGG...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACTATTCACAAGTGCAATaGTGGAATCACTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHYSQVQ*WNHWKF
Trigger: AAATTTCCAGTGATTCCACCATTGCACTTGTGAATA...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAACCTTTTATTTCCCTTaGCCACAAAGGGTGCTAATA +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALETFYFP*PQRVLI
Trigger: TATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACACTAAGAAAAGTTCATTaGCACAAATATCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTLRKVH*HKYPEV
Trigger: TACCTCTGGATATTTGTGCCAATGAACTTTTCTTAG...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACACACCTGTACTAAAATaGCTTGTACAACAATGTACA +
Preference number: 4 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHTPVLK*LVQQCT
Trigger: TGTACATTGTTGTACAAGCCATTTTAGTACAGGTGT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACTGTCCAAGTATTTGTaGAAAGGAAGTCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKLSKYL*KGSLNC
Trigger: ACAGTTAAGACTTCCTTTTCACAAATACTTGGACAG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAACGAAGATGGTGTATTaGGGAGTCTTTATGATGATT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALETKMVY*GVFMMI
Trigger: AATCATCATAAAGACTCCTCAATACACCATCTTCGT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGACGAAGATGGTGTATTaGGGAGTCTTTATGATGATT +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMTKMVY*GVFMMI
Trigger: AATCATCATAAAGACTCCTCAATACACCATCTTCGT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATTAGAGAAGGCATGCTaGGTAATACAATCCATGTTA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRLEKAC*VIQSML
Trigger: TAACATGGATTGTATTACTCAGCATGCCTTCTCTAA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATATAAACTAAACAACTaGACTGCTCCAATACCAGGA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRYKLNN*TAPIPG
Trigger: TCCTGGTATTGGAGCAGTTCAGTTGTTTAGTTTATA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGTAGTATCACATGAATaGCAAGACAACCAACAACAA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRVVSHE*QDNQQQ
Trigger: TTGTTGTTGGTTGTCTTGTCATTCATGTGATACTAC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAATGAGTAGTATCACATaGATGACAAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEMSSIT*MTRQPT
Trigger: TGTTGGTTGTCTTGTCATTCATGTGATACTACTCAT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATTGGATTTGGATTACTaGCCTGACTTTTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRLDLDY*PDFSFL
Trigger: TAGGAAAGAAAAGTCAGGTCAGTAATCCAAATCCAA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAAGTACAGACAGATTCTaGCTCATATATCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALESTDRF*LIYQVL
Trigger: TAGGACTTGATATATGAGTCAGAATCTGTCTGTACT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATTACAATGTACAGAATaGGTACAGACAGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALELQCTE*VQTDSD
Trigger: GTCAGAATCTGTCTGTACTCATTCTGTACATTGTAA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR TCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAGTAAAAAGTCCAATATaGAACAGAACGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRVKSPI*NRTSAT
Trigger: TGTTGCACTCGTTCTGTTTCATATTGGACTTTTTAC...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATAATAAGATCAAAGAATaGTCGAACTGTAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: NPTICIQHSALTIDMSVDNKIKE*SNCSQL
Trigger: CAGTTGACTACAGTTCGAGCATTCTTTGATCTTATT...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTACGGAATAAGGATAAATaGCAAAGGTTTACATGGATC +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVRNKDK*QRFTWI
Trigger: GATCCATGTAAACCTTTGGCATTTATCCTTATTCCG...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTACACAAAACAAAACCATaGTTCAACTACTTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVHKTKP*FNYFPQ
Trigger: TTGAGGGAAGTAGTTGAAGCATGGTTTTGTTTTGTG...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATTTTGGCAACCATGGTaGAATGAATTGAATCCAATG +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKFWQPW*NELNPM
Trigger: CATTGGATTCAATTCATTGCACCATGGTTGCCAAAA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGAATACATATTCACAAGTaGAATGGTGGAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRIHIHK*NGGITG
Trigger: TCCAGTGATTCCACCATTGCACTTGTGAATATGTAT...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAATACATATTCACAAGTaGAATGGTGGAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEIHIHK*NGGITG
Trigger: TCCAGTGATTCCACCATTGCACTTGTGAATATGTAT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTATTTGGCAGCATAACATaGCAAACACTTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVFGSIT*QTLSES
Trigger: ACTTTCTGAAAGTGTTTGGCATGTTATGCTGCCAAA...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATATTGCCACACTTTTTaGAGCAAATTCTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKYCHTF*SKFLTL
Trigger: AAGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTATATTGCCACACTTTTTaGAGCAAATTCTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVYCHTF*SKFLTL
Trigger: AAGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATA...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGCAGCTACAGAAAGTGTaGTTAAATTTATGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMQLQKV*LNLCVE
Trigger: CTCGACACATAAATTTAACCACACTTTCTGTAGCTG...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGCAGATAAACGAAGATaGTGTATTGAGGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKADKRR*CIEESL
Trigger: TAAAGACTCCTCAATACACCATCTTCGTTTATCTGC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGCAGATAAACGAAGATaGTGTATTGAGGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVADKRR*CIEESL
Trigger: TAAAGACTCCTCAATACACCATCTTCGTTTATCTGC...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CCA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGTCATGCACTCCAAATaGATTTTCCCCAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: PIISSKLQSVVTPKEALEVMHSK*IFPSKF
Trigger: AAATTTACTGGGGAAAATCCATTTGGAGTGCATGAC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR CAA 72 bp TTGTGTAAGTTTGAATCATGTTTCCACCCATCAATCTaGCATTGGTTACCAAGAAAACATATCTCCTTACCA +
Preference number: 4 (lower is better)
Translates to: LCKFESCFHPSI*HWLPRKHISLP
Trigger: TGGTAAGGAGATATGTTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAAACATGATTCAAACTTACACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
3UTR CAA 72 bp TTTTTATTATATACTACAGGACAGGTTCCTCTGCACTaGTTAAGTGTTGTTGTTATGCACTGTACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FLLYTTGQVPLH*LSVVVMHCTFW
Trigger: CCAGAAAGTACAGTGCATAACAACAACACTTAACAAGTGCAGAGGAACCTGTCCTGTAGTATATAATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354764.9
3UTR CAA 72 bp CAAATATCCAGAGGTATTTTACAGTTTCATTTACCTTaGGTGGCAAAGAGTATTTTGCTAACCGTATGGATA +
Preference number: 4 (lower is better)
Translates to: QISRGILQFHLP*VAKSILLTVWI
Trigger: TATCCATACGGTTAGCAAAATACTCTTTGCCACCAAAGGTAAATGAAACTGTAAAATACCTCTGGATATTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR GCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAACAGACTATTTTATATaGACAGGAGTCCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKTDYFI*TGVLND
Trigger: ATCATTGAGGACTCCTGTGCATATAAAATAGTCTGT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGAAGTTGCATAATGCATaGAGTAAAAGAGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMKLHNA*SKRGMK
Trigger: CTTCATTCCTCTTTTACTCCATGCATTATGCAACTT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAATATTCACAAGTGCAATaGTGGAATCACTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKYSQVQ*WNHWKF
Trigger: AAATTTCCAGTGATTCCACCATTGCACTTGTGAATA...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGATTTTGCTAACCGTATaGATACAGTCACATAGTTTC +
Preference number: 4 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMILLTV*IQSHSF
Trigger: GAAACTATGTGACTGTATCCATACGGTTAGCAAAAT...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAATTTTGCTAACCGTATaGATACAGTCACATAGTTTC +
Preference number: 4 (lower is better)
Translates to: EYRQILTHISSPIQSLQKILLTV*IQSHSF
Trigger: GAAACTATGTGACTGTATCCATACGGTTAGCAAAAT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CCA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTACTAAGAAAAGTTCATTaGCACAAATATCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: KNPTICIQHSALTIDMSVLRKVH*HKYPEV
Trigger: TACCTCTGGATATTTGTGCCAATGAACTTTTCTTAG...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGACTATGACCGCCCCATaGGACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLTMTAP*DSSLGD
Trigger: GTCACCCAGGCTGGAGTCCAATGGGGCGGTCATAGT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS GCA 90 bp CTGCTGAACTCTGATACTCCGGGTACTCAAACATGTAGCTCATACTaGACTTATTCTCCTCGAAGCCGAAGAAGACATCCCACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LLNSDTPGTQTCSSY*TYSPRSRRRHPTAP
Trigger: TGGGGCTGTGGGATGTCTTCTTCGGCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGTTTGAGTACCCGGAGTATCAGAGTTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374738.3
ENST00000470179.5
CDS GCA 90 bp CTTCTCATCTCTGATACTCCGGGTACTCAAACATGTAGCTCATACTaGACTTATTCTCCTCGAAGCCGAAGAAGACATCCCACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LLISDTPGTQTCSSY*TYSPRSRRRHPTAP
Trigger: TGGGGCTGTGGGATGTCTTCTTCGGCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGTTTGAGTACCCGGAGTATCAGAGATGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAGGCAGGGGCATCACTaGCACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRARQGHH*HLGGGG
Trigger: ACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCCT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACACTATGACCGCCCCATaGGACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHTMTAP*DSSLGD
Trigger: GTCACCCAGGCTGGAGTCCAATGGGGCGGTCATAGT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS GCA 90 bp GTTCTATTTTCTGATACTCCGGGTACTCAAACATGTAGCTCATACTaGACTTATTCTCCTCGAAGCCGAAGAAGACATCCCACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: VLFSDTPGTQTCSSY*TYSPRSRRRHPTAP
Trigger: TGGGGCTGTGGGATGTCTTCTTCGGCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGTTTGAGTACCCGGAGTATCAGAAAATAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000409475.5
CDS-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAAGGCAGGGGCATCACTaGCACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: EYRQILTHISSPIQSLQKRQGHH*HLGGGG
Trigger: ACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCCT...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAAGGCAGGGGCATCACTaGCACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PIISSKLQSVVTPKEALERQGHH*HLGGGG
Trigger: ACCTCCACCTCCCAGGTGCAAGTGATGCCCCTGCCT...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS TCA 90 bp CACATAATTGTGGATGGGCACTTTTTCAATGATATCACAATTGTTTaGATGCTCCCTCTAGGACACAGGAGTTGCGAGAGGGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HIIVDGHFFNDITIV*MLPLGHRSCERVEG
Trigger: CCCTTCCACCCTCTCGCAACTCCTGTGTCCTAGAGGGAGCATTCAAACAATTGTGATATCATTGAAAAAGTGCCCATCCACAATTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476250.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGAAGACAAGATCCACTTaGTTCATGGTGGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLKTRST*FMVAAK
Trigger: TTTGGCAGCCACCATGAACAAAGTGGATCTTGTCTT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAACTATGACCGCCCCATaGGACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: KNPTICIQHSALTIDMSVTMTAP*DSSLGD
Trigger: GTCACCCAGGCTGGAGTCCAATGGGGCGGTCATAGT...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGGAGTTCAAGATCAGCTaGGGCAACAAACTGAAACCT +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLEFKIS*GNKLKP
Trigger: AGGTTTCAGTTTGTTGCCCAAGCTGATCTTGAACTC...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTATGCGGGATAGCGTTTaGCCAGTTTCTTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVMRDSV*PVSLEV
Trigger: AACTTCCAAAGAAACTGGCAAAACGCTATCCCGCAT...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGACAGAAACGTCCATTTaGCTAATCTTCAAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLTETSI*LIFKEP
Trigger: GGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGT...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTGAGTTCAAGATCAGCTaGGGCAACAAACTGAAACCT +
Preference number: 5 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVEFKIS*GNKLKP
Trigger: AGGTTTCAGTTTGTTGCCCAAGCTGATCTTGAACTC...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCACCTTTTATTTCCCTaGGCCACAAAGGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVHLLFP*ATKGAN
Trigger: ATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGTG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGCAGGTTCCTCTGCACTaGTTAAGTGTTGTTGTTATG +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLQVPLH*LSVVVM
Trigger: CATAACAACAACACTTAACAAGTGCAGAGGAACCTG...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS TCA 90 bp GAAGCTAGGTGCCAGACACATAATTGTGGATGGGCACTTTTTCAATaGTATCACAATTGTTTGAATGCTCCCTCTAGGACACAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: EARCQTHNCGWALFQ*YHNCLNAPSRTQEL
Trigger: CAACTCCTGTGTCCTAGAGGGAGCATTCAAACAATTGTGATATCATTGAAAAAGTGCCCATCCACAATTATGTGTCTGGCACCTAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476250.5
CDS GCA 90 bp GGATCCCTCTCCATAAAGATACAACTCATATGCGGGATAGCGTTTTaGCAGTTTCTTTGGAAGTTCTATTTTCTGATACTCCGGGTACTC +
Preference number: 5 (lower is better)
Translates to: GSLSIKIQLICGIAF*QFLWKFYFLILRVL
Trigger: GAGTACCCGGAGTATCAGAAAATAGAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTGTATCTTTATGGAGAGGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000409475.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTTATTGCCACACTTTTaGGAGCAAATTCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLLLPHF*EQILDP
Trigger: AGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAACAGAAACGTCCATTTaGCTAATCTTCAAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSTETSI*LIFKEP
Trigger: GGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGT...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGTGGCAAAGAGTATTTaGCTAACCGTATGGATACAG +
Preference number: 5 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSVAKSI*LTVWIQ
Trigger: CTGTATCCATACGGTTAGCAAAATACTCTTTGCCAC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGTTTTGGAGCAAATTCTaGACCCTTATAGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLFWSKF*TLIEFE
Trigger: CTCAAACTCTATAAGGGTCAAGAATTTGCTCCAAAA...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCAGGTATTGTTTTCTGGTaGAGCAATATGGAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSGIVFW*SNMEFQ
Trigger: CTGAAACTCCATATTGCTCAACCAGAAAACAATACC...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp GTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCACCTTCGCATCTCTGCCCATCAATCTTGCATaGGTTACCAAGAAAACATAT +
Preference number: 5 (lower is better)
Translates to: VTETSILLIFKEPTFASLPINLA*VTKKTY
Trigger: ATATGTTTTCTTGGTAACCAATGCAAGATTGATGGG...CAGAGATGCGAAGGTGGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTCCAAAGGATCTTGCTGTCCATACTGATGGATCTGTGTGTTCCCTCTTATCATTCCACCCATCAATCTaGCATTGGTTACCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: SPKDLAVHTDGSVCSLLSFHPSI*HWLPRK
Trigger: TTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAA...TGATAAGAGGGAACACACAGATCCATCAGTATGGACAGCAAGATCCTTTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCAGAGATTTCGATATTaGGCTTTCTGTCCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAQRFRY*AFCPAS
Trigger: GGAGGCAGGACAGAAAGCCAAATATCGAAATCTCTG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CAA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGGATTTGGGGCCAATTaGAGAGGACCACCCATAATA +
Preference number: 5 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTGFGAN*RGPPII
Trigger: TATTATGGGTGGTCCTCTCAAATTGGCCCCAAATCC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CAA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATGCGGGATAGCGTTTaGCCAGTTTCTTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: AVYASKNPTICIQHSALTMRDSV*PVSLEV
Trigger: AACTTCCAAAGAAACTGGCAAAACGCTATCCCGCAT...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGATGCGGGATAGCGTTTaGCCAGTTTCTTTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SAVYASKNPTICIQHSALMRDSV*PVSLEV
Trigger: AACTTCCAAAGAAACTGGCAAAACGCTATCCCGCAT...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTTTTTGGAGCAAATTCTaGACCCTTATAGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVFWSKF*TLIEFE
Trigger: CTCAAACTCTATAAGGGTCAAGAATTTGCTCCAAAA...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp CAAGCACCTGTCTGCCATATCCCCACCACGAGTTTATCATTTCCCTTTAATGTTCACTTGCTTACCACGTaGATTTTAAAAGCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: QAPVCHIPTTSLSFPFNVHLLTT*ILKAWY
Trigger: ATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTG...AACATTAAAGGGAAATGATAAACTCGTGGTGGGGATATGGCAGACAGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCTATCTTCAGCATCGTaGGCAGATAAACGAAGATGG +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALSSAS*ADKRRW
Trigger: CCATCTTCGTTTATCTGCCAACGATGCTGAAGATAG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACCTATCTTCAGCATCGTaGGCAGATAAACGAAGATGG +
Preference number: 5 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHLSSAS*ADKRRW
Trigger: CCATCTTCGTTTATCTGCCAACGATGCTGAAGATAG...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCTTCTCCAAAGGATCTaGCTGTCCATACTGATGGAT +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALLQRI*LSILMD
Trigger: ATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TCTTATTTGTCAAACAGTAATCCCAGAAGTCACCTAGGCAAATCAAGATTCCACAAGACAAGATCCACTTaGTTCATGGTGGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: SYLSNSNPRSHLGKSRFHKTRST*FMVAAK
Trigger: TTTGGCAGCCACCATGAACAAAGTGGATCTTGTCTT...GTGGAATCTTGATTTGCCTAGGTGACTTCTGGGATTACTGTTTGACAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGTATACTCTTCTGCCTaGCCGATTACCTTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGVYSSA*PITFFL
Trigger: TAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATAC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CAA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGTATACTCTTCTGCCTaGCCGATTACCTTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTVYSSA*PITFFL
Trigger: TAGGAAGAAGGTAATCGGCAAGGCAGAAGAGTATAC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAAGTCAAAGTGGTACTaGAAGTCAATGTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAKSKWY*KSMSSA
Trigger: AGCAGAGGACATTGACTTCAAGTACCACTTTGACTT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGAAGTCAAAGTGGTACTaGAAGTCAATGTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: SAVYASKNPTICIQHSALKSKWY*KSMSSA
Trigger: AGCAGAGGACATTGACTTCAAGTACCACTTTGACTT...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCCTGGTTATTTCTTCTTaGACTGCTGAGCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALVISS*TAEHLL
Trigger: AAGCAAGTGCTCAGCAGTCAAAGAAGAAATAACCAG...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp GCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACACTGGTTATTTCTTCTTaGACTGCTGAGCACTTGCTT +
Preference number: 5 (lower is better)
Translates to: AVYASKNPTICIQHSALTLVISS*TAEHLL
Trigger: AAGCAAGTGCTCAGCAGTCAAAGAAGAAATAACCAG...TGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACTTCTTCTAGAGTGTTaGGGATTCACAGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: EYRQILTHISSPIQSLQKLLLEC*GFTGWL
Trigger: TAGCCAGCCTGTGAATCCCAAACACTCTAGAAGAAG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAACTTCTTCTAGAGTGTTaGGGATTCACAGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PIISSKLQSVVTPKEALELLLEC*GFTGWL
Trigger: TAGCCAGCCTGTGAATCCCAAACACTCTAGAAGAAG...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp AAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTACTTCTTCTAGAGTGTTaGGGATTCACAGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: KNPTICIQHSALTIDMSVLLLEC*GFTGWL
Trigger: TAGCCAGCCTGTGAATCCCAAACACTCTAGAAGAAG...TACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGACAGAAACGTCCATTTaGCTAATCTTCAAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: SAVYASKNPTICIQHSALTETSI*LIFKEP
Trigger: GGGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGT...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGAGTGGCAAAGAGTATTTaGCTAACCGTATGGATACAG +
Preference number: 5 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGVAKSI*LTVWIQ
Trigger: CTGTATCCATACGGTTAGCAAAATACTCTTTGCCAC...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CAA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATGGAAGTTCTATTTTCTaGCTCTCCAGAACCTCCATC +
Preference number: 5 (lower is better)
Translates to: NPTICIQHSALTIDMSVDGSSIF*LSRTSI
Trigger: GATGGAGGTTCTGGAGAGCAAGAAAATAGAACTTCC...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409188.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCGCCAATAGAACGAACTaGCTTATAACTTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRAANRTN*LITSSI
Trigger: AATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGC...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGGCCAATAGAACGAACTaGCTTATAACTTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: SAVYASKNPTICIQHSALANRTN*LITSSI
Trigger: AATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGC...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATAAGTCAAAGTGGTACTaGAAGTCAATGTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: NPTICIQHSALTIDMSVDKSKWY*KSMSSA
Trigger: AGCAGAGGACATTGACTTCAAGTACCACTTTGACTT...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTCTGAAAATTAAGGGAGGCCTCTACAGCAATAGTTCTGGAAATACTAAAGGATTATTGCCACACTTTTaGGAGCAAATTCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: TLKIKGGLYSNSSGNTKGLLPHF*EQILDP
Trigger: AGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAA...TCCTTTAGTATTTCCAGAACTATTGCTGTAGAGGCCTCCCTTAATTTTCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CAA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGTGTAGTCAACTGCAATaGTTTACACCACACAATGGA +
Preference number: 5 (lower is better)
Translates to: SAVYASKNPTICIQHSALCSQLQ*FTPHNG
Trigger: TCCATTGTGTGGTGTAAACAATTGCAGTTGACTACA...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACTATCTTCAGCATCGTaGGCAGATAAACGAAGATGG +
Preference number: 5 (lower is better)
Translates to: EYRQILTHISSPIQSLQKLSSAS*ADKRRW
Trigger: CCATCTTCGTTTATCTGCCAACGATGCTGAAGATAG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGACTTCTCCAAAGGATCTaGCTGTCCATACTGATGGAT +
Preference number: 5 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRLLQRI*LSILMD
Trigger: ATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAG...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGCTTCTCCAAAGGATCTaGCTGTCCATACTGATGGAT +
Preference number: 5 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMLLQRI*LSILMD
Trigger: ATCCATCAGTATGGACAGCAAGATCCTTTGGAGAAG...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGGAGTTCAAGATCAGCTaGGGCAACAAACTGAAACCT +
Preference number: 5 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMEFKIS*GNKLKP
Trigger: AGGTTTCAGTTTGTTGCCCAAGCTGATCTTGAACTC...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGCACCTTTTATTTCCCTaGGCCACAAAGGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMHLLFP*ATKGAN
Trigger: ATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGTG...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAACACCTTTTATTTCCCTaGGCCACAAAGGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: EYRQILTHISSPIQSLQKHLLFP*ATKGAN
Trigger: ATTAGCACCCTTTGTGGCCAAGGGAAATAAAAGGTG...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAGCTAAGAAAAGTTCATaGGCACAAATATCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTAKKSS*AQISRG
Trigger: ACCTCTGGATATTTGTGCCAATGAACTTTTCTTAGC...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTTTATTGCCACACTTTTaGGAGCAAATTCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: PTICIQHSALTIDMSVDFLLPHF*EQILDP
Trigger: AGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAA...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCTTAACACCACTTTCCTaGAAGACAATCCAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRALTPLS*KTIQRK
Trigger: TTTCCTTTGGATTGTCTTCAAGGAAAGTGGTGTTAA...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp GCAAAGAGTATTTTGCTAACCGTATGGATACAGTCACATAGTTTCCAATGCACAAACGAAGATGGTGTATaGAGGAGTCTTTATGATGAT +
Preference number: 5 (lower is better)
Translates to: AKSILLTVWIQSHSFQCTNEDGV*RSLYDD
Trigger: ATCATCATAAAGACTCCTCAATACACCATCTTCGTT...TGTGCATTGGAAACTATGTGACTGTATCCATACGGTTAGCAAAATACTCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTTTCCTTTTCTCAAGTGACAGAAACGTCCATTTTGCTAATCTTCAAAGAGCCAACGAAGATGGTGTATaGAGGAGTCTTTATGATGAT +
Preference number: 5 (lower is better)
Translates to: TFLFSSDRNVHFANLQRANEDGV*RSLYDD
Trigger: ATCATCATAAAGACTCCTCAATACACCATCTTCGTT...GGCTCTTTGAAGATTAGCAAAATGGACGTTTCTGTCACTTGAGAAAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp AGTGCTGTTTATGCAAGCAAAAATCCAACTATTTGTATCCAGCATAGTGCTCTGCCCATCAATCTTGCATaGGTTACCAAGAAAACATAT +
Preference number: 5 (lower is better)
Translates to: SAVYASKNPTICIQHSALPINLA*VTKKTY
Trigger: ATATGTTTTCTTGGTAACCAATGCAAGATTGATGGG...CAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGTGGCAAAGAGTATTTaGCTAACCGTATGGATACAG +
Preference number: 5 (lower is better)
Translates to: PIISSKLQSVVTPKEALEVAKSI*LTVWIQ
Trigger: CTGTATCCATACGGTTAGCAAAATACTCTTTGCCAC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTGCTAAGAAAAGTTCATaGGCACAAATATCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PTICIQHSALTIDMSVDFAKKSS*AQISRG
Trigger: ACCTCTGGATATTTGTGCCAATGAACTTTTCTTAGC...AAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATTTTTGGAGCAAATTCTaGACCCTTATAGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: NPTICIQHSALTIDMSVDFWSKF*TLIEFE
Trigger: CTCAAACTCTATAAGGGTCAAGAATTTGCTCCAAAA...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTAAAACTTTAGTTGAGAGGATTTGGGCATTTACAGTCTACACATCTAGAAGATGTAGTCAACTGCAATaGTTTACACCACACAATGGA +
Preference number: 5 (lower is better)
Translates to: TKTLVERIWAFTVYTSRRCSQLQ*FTPHNG
Trigger: TCCATTGTGTGGTGTAAACAATTGCAGTTGACTACA...TCTTCTAGATGTGTAGACTGTAAATGCCCAAATCCTCTCAACTAAAGTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATGTAGTCAACTGCAATaGTTTACACCACACAATGGA +
Preference number: 5 (lower is better)
Translates to: PIISSKLQSVVTPKEALECSQLQ*FTPHNG
Trigger: TCCATTGTGTGGTGTAAACAATTGCAGTTGACTACA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp AATCCAACTATTTGTATCCAGCATAGTGCTCTGACAATAGACATGAGTGTAGATCACTTGCTTACCACGTaGATTTTAAAAGCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: NPTICIQHSALTIDMSVDHLLTT*ILKAWY
Trigger: ATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTG...ATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423035.5
CDS-3UTR CAA 90 bp GAGTACAGACAGATTCTGACTCATATATCAAGTCCTATACAAAGTCTTCAGAAAGGTATTGTTTTCTGGTaGAGCAATATGGAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: EYRQILTHISSPIQSLQKGIVFW*SNMEFQ
Trigger: CTGAAACTCCATATTGCTCAACCAGAAAACAATACC...TTTCTGAAGACTTTGTATAGGACTTGATATATGAGTCAGAATCTGTCTGTACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS-3UTR CAA 90 bp ACTGGAGATCATGCATGTTTAAATGGAAAGATCAGCAAGGTGACAATCATTTTTTTCCACCCATCAATCTaGCATTGGTTACCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: TGDHACLNGKISKVTIIFFHPSI*HWLPRK
Trigger: TTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAA...AAAAATGATTGTCACCTTGCTGATCTTTCCATTTAAACATGCATGATCTCCAGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000354764.9
CDS-3UTR CAA 90 bp TGGCTAATGTCTCCAATTTATTCAGGTGTACTGTTTATACTCATGCTACTAATGTTCCACCCATCAATCTaGCATTGGTTACCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: WLMSPIYSGVLFILMLLMFHPSI*HWLPRK
Trigger: TTTTCTTGGTAACCAATGCAAGATTGATGGGTGGAA...CATTAGTAGCATGAGTATAAACAGTACACCTGAATAAATTGGAGACATTAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAAGCTAAGAAAAGTTCATaGGCACAAATATCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PIISSKLQSVVTPKEALEAKKSS*AQISRG
Trigger: ACCTCTGGATATTTGTGCCAATGAACTTTTCTTAGC...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354764.9
ENST00000422444.1
ENST00000423035.5
CDS-3UTR CAA 90 bp CCTATTATCAGTTCCAAATTACAATCAGTAGTAACTCCAAAGGAGGCTTTAGAATTAACACCACTTTCCTaGAAGACAATCCAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: PIISSKLQSVVTPKEALELTPLS*KTIQRK
Trigger: TTTCCTTTGGATTGTCTTCAAGGAAAGTGGTGTTAA...TTCTAAAGCCTCCTTTGGAGTTACTACTGATTGTAATTTGGAACTGATAATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000423035.5
CDS CAA 72 bp CACAATTGTTTGAATGCTCCCTCTAGGACACAGGAGTaGCGAGAGGGTGGAAGGGGGTTCAGGTTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: HNCLNAPSRTQE*REGGRGFRFQG
Trigger: TCCTTGGAACCTGAACCCCCTTCCACCCTCTCGCAACTCCTGTGTCCTAGAGGGAGCATTCAAACAATTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476250.5
CDS CCA 72 bp AACCTCCATCTCTTGGGGAATGGGTTCCACGTTAACTaGAGGAGGCAATTTCGTCCAGCTTCCATTCAAACT +
Preference number: 6 (lower is better)
Translates to: NLHLLGNGFHVN*RRQFRPASIQT
Trigger: AGTTTGAATGGAAGCTGGACGAAATTGCCTCCTCCAGTTAACGTGGAACCCATTCCCCAAGAGATGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409188.5
ENST00000485830.1
CDS GCA 72 bp TCTGATACTCCGGGTACTCAAACATGTAGCTCATACTaGACTTATTCTCCTCGAAGCCGAAGAAGACATCCC +
Preference number: 6 (lower is better)
Translates to: SDTPGTQTCSSY*TYSPRSRRRHP
Trigger: GGGATGTCTTCTTCGGCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGTTTGAGTACCCGGAGTATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354764.9
ENST00000374738.3
ENST00000409475.5
ENST00000423035.5
ENST00000470179.5
CDS TCA 72 bp GTGGATGGGCACTTTTTCAATGATATCACAATTGTTTaGATGCTCCCTCTAGGACACAGGAGTTGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: VDGHFFNDITIV*MLPLGHRSCER
Trigger: CCTCTCGCAACTCCTGTGTCCTAGAGGGAGCATTCAAACAATTGTGATATCATTGAAAAAGTGCCCATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476250.5
CDS CCA 72 bp CAACTCATATGCGGGATAGCGTTTTGCCAGTTTCTTTaGAAGTTCTATTTTCTTGCTCTCCAGAACCTCCAT +
Preference number: 6 (lower is better)
Translates to: QLICGIAFCQFL*KFYFLALQNLH
Trigger: ATGGAGGTTCTGGAGAGCAAGAAAATAGAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409188.5
CDS CAA 90 bp AGGATCCCTCTCCATAAAGATACAACTCATATGCGGGATAGCGTTTaGCCAGTTTCTTTGGAAGTTCTATTTTCTGATACTCCGGGTACT +
Preference number: 6 (lower is better)
Translates to: RIPLHKDTTHMRDSV*PVSLEVLFSDTPGT
Trigger: AGTACCCGGAGTATCAGAAAATAGAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTGTATCTTTATGGAGAGGGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354764.9
ENST00000409475.5
CDS CAA 90 bp TCTACAACAAACTGCCAGAAAAACCCTTTAAGAGAGGTTTTAGTATaGCAGATGCTGAATTACCTCTTACTTGAGCTTACTTCCACGAAC +
Preference number: 6 (lower is better)
Translates to: STTNCQKNPLREVLV*QMLNYLLLELTSTN
Trigger: GTTCGTGGAAGTAAGCTCAAGTAAGAGGTAATTCAGCATCTGCAATACTAAAACCTCTCTTAAAGGGTTTTTCTGGCAGTTTGTTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482051.5
CDS GCA 72 bp TCCATAAAGATACAACTCATATGCGGGATAGCGTTTTaGCAGTTTCTTTGGAAGTTCTATTTTCTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: SIKIQLICGIAF*QFLWKFYFLAL
Trigger: GAGAGCAAGAAAATAGAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTGTATCTTTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409188.5
CDS CAA 90 bp ATATCTGTCCAAAGTTCAGAAGCTCTAGATTGTAGTATAGGCCATTaGTATTTAACACCACTTTCCTTGAAGACAATCCTGTTGAATTCA +
Preference number: 6 (lower is better)
Translates to: ISVQSSEALDCSIGH*YLTPLSLKTILLNS
Trigger: TGAATTCAACAGGATTGTCTTCAAGGAAAGTGGTGTTAAATACAAATGGCCTATACTACAATCTAGAGCTTCTGAACTTTGGACAGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476250.5
CDS CCA 72 bp AATTACCTCTTACTTGAGCTTACTTCCACGAACAGATaGTACATAAACAACAAGATGAGACAAAGATGGATA +
Preference number: 6 (lower is better)
Translates to: NYLLLELTSTNR*YINNKMRQRWI
Trigger: TATCCATCTTTGTCTCATCTTGTTGTTTATGTACCATCTGTTCGTGGAAGTAAGCTCAAGTAAGAGGTAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482051.5